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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP029685 Staphylococcus aureus strain CMRSA-3 chromosome, complete genome 11 crisprs cas3,DEDDh,DinG,csa3,WYL 14 5 14 1

Results visualization

1. CP029685
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_1 514091-514191 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_2 781534-781626 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_3 900564-900646 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_4 941616-941696 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_6 996931-997012 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_7 1060348-1060630 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_8 1194022-1194109 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_9 1274361-1274662 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_10 1278534-1278619 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_11 2331935-2332085 Orphan NA
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP029685_12 2456098-2456291 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP029685_6 6.1|996955|34|CP029685|CRISPRCasFinder 996955-996988 34 CP029685.1 1486651-1486684 0 1.0
CP029685_6 6.1|996955|34|CP029685|CRISPRCasFinder 996955-996988 34 CP029685.1 1575837-1575870 0 1.0
CP029685_12 12.2|2456177|36|CP029685|CRT 2456177-2456212 36 CP029685.1 1278465-1278500 0 1.0
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 475614-475642 1 0.966
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 1940171-1940199 1 0.966
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 CP029685.1 910036-910061 1 0.962
CP029685_7 7.1|1060378|26|CP029685|CRT 1060378-1060403 26 CP029685.1 1060322-1060347 1 0.962
CP029685_7 7.3|1060492|26|CP029685|CRT 1060492-1060517 26 CP029685.1 947100-947125 1 0.962
CP029685_7 7.3|1060492|26|CP029685|CRT 1060492-1060517 26 CP029685.1 2095727-2095752 1 0.962
CP029685_7 7.4|1060548|53|CP029685|CRT 1060548-1060600 53 CP029685.1 286626-286678 1 0.981
CP029685_7 7.4|1060548|53|CP029685|CRT 1060548-1060600 53 CP029685.1 2762761-2762813 1 0.981
CP029685_9 9.1|1274382|35|CP029685|CRT 1274382-1274416 35 CP029685.1 1274326-1274360 1 0.971
CP029685_9 9.3|1274495|35|CP029685|CRT 1274495-1274529 35 CP029685.1 1274326-1274360 1 0.971
CP029685_9 9.5|1274607|35|CP029685|CRT 1274607-1274641 35 CP029685.1 2212197-2212231 1 0.971
CP029685_9 9.6|1274510|20|CP029685|PILER-CR 1274510-1274529 20 CP029685.1 1274341-1274360 1 0.95
CP029685_10 10.1|1278564|26|CP029685|CRISPRCasFinder 1278564-1278589 26 CP029685.1 322031-322056 1 0.962
CP029685_10 10.1|1278564|26|CP029685|CRISPRCasFinder 1278564-1278589 26 CP029685.1 910092-910117 1 0.962
CP029685_12 12.2|2456177|36|CP029685|CRT 2456177-2456212 36 CP029685.1 1940164-1940199 1 0.972
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 322163-322191 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 996997-997025 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 1080018-1080046 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 1278472-1278500 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 1754941-1754969 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 2106451-2106479 2 0.931
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 CP029685.1 2647705-2647733 2 0.931
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 CP029685.1 322031-322056 2 0.923
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 CP029685.1 910092-910117 2 0.923
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 CP029685.1 1060322-1060347 2 0.923
CP029685_7 7.1|1060378|26|CP029685|CRT 1060378-1060403 26 CP029685.1 910036-910061 2 0.923
CP029685_7 7.3|1060492|26|CP029685|CRT 1060492-1060517 26 CP029685.1 475480-475505 2 0.923
CP029685_9 9.5|1274607|35|CP029685|CRT 1274607-1274641 35 CP029685.1 900546-900580 2 0.943
CP029685_9 9.5|1274607|35|CP029685|CRT 1274607-1274641 35 CP029685.1 947136-947170 2 0.943
CP029685_9 9.5|1274607|35|CP029685|CRT 1274607-1274641 35 CP029685.1 2762824-2762858 2 0.943
CP029685_10 10.1|1278564|26|CP029685|CRISPRCasFinder 1278564-1278589 26 CP029685.1 910036-910061 2 0.923
CP029685_10 10.1|1278564|26|CP029685|CRISPRCasFinder 1278564-1278589 26 CP029685.1 910148-910173 2 0.923
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 947080-947112 2 0.939
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 1278521-1278553 2 0.939
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 1486606-1486638 2 0.939
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 1575883-1575915 2 0.939
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 2095707-2095739 2 0.939
CP029685_12 12.1|2456121|33|CP029685|CRT 2456121-2456153 33 CP029685.1 2728559-2728591 2 0.939
CP029685_12 12.2|2456177|36|CP029685|CRT 2456177-2456212 36 CP029685.1 322156-322191 2 0.944
CP029685_12 12.2|2456177|36|CP029685|CRT 2456177-2456212 36 CP029685.1 1754941-1754976 2 0.944
CP029685_12 12.2|2456177|36|CP029685|CRT 2456177-2456212 36 CP029685.1 2106451-2106486 2 0.944
CP029685_12 12.3|2456236|33|CP029685|CRT 2456236-2456268 33 CP029685.1 947080-947112 2 0.939
CP029685_12 12.3|2456236|33|CP029685|CRT 2456236-2456268 33 CP029685.1 1278521-1278553 2 0.939
CP029685_12 12.3|2456236|33|CP029685|CRT 2456236-2456268 33 CP029685.1 1486606-1486638 2 0.939
CP029685_12 12.3|2456236|33|CP029685|CRT 2456236-2456268 33 CP029685.1 2095707-2095739 2 0.939
CP029685_12 12.3|2456236|33|CP029685|CRT 2456236-2456268 33 CP029685.1 2728559-2728591 2 0.939

1. spacer 6.1|996955|34|CP029685|CRISPRCasFinder matches to position: 1486651-1486684, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

2. spacer 6.1|996955|34|CP029685|CRISPRCasFinder matches to position: 1575837-1575870, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 12.2|2456177|36|CP029685|CRT matches to position: 1278465-1278500, mismatch: 0, identity: 1.0

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttctttttgaaattctcta	Protospacer
************************************

4. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 475614-475642, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

5. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 1940171-1940199, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

6. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to position: 910036-910061, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** ********************

7. spacer 7.1|1060378|26|CP029685|CRT matches to position: 1060322-1060347, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
***********************.**

8. spacer 7.3|1060492|26|CP029685|CRT matches to position: 947100-947125, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

9. spacer 7.3|1060492|26|CP029685|CRT matches to position: 2095727-2095752, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

10. spacer 7.4|1060548|53|CP029685|CRT matches to position: 286626-286678, mismatch: 1, identity: 0.981

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgcgaaaatattatttctgtcccactcccaa	Protospacer
*********************************.*******************

11. spacer 7.4|1060548|53|CP029685|CRT matches to position: 2762761-2762813, mismatch: 1, identity: 0.981

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttacgaaaatatcatttctgtcccactcccaa	Protospacer
***********************.*****************************

12. spacer 9.1|1274382|35|CP029685|CRT matches to position: 1274326-1274360, mismatch: 1, identity: 0.971

cagagagaaataggatcaccaatttcaacagacaa	CRISPR spacer
cagagagaaataggatcaccaattccaacagacaa	Protospacer
************************.**********

13. spacer 9.3|1274495|35|CP029685|CRT matches to position: 1274326-1274360, mismatch: 1, identity: 0.971

cagagagaaataggatcaccaattccaacaaacaa	CRISPR spacer
cagagagaaataggatcaccaattccaacagacaa	Protospacer
******************************.****

14. spacer 9.5|1274607|35|CP029685|CRT matches to position: 2212197-2212231, mismatch: 1, identity: 0.971

catagagaaattggaaccccaatttctacagacaa	CRISPR spacer
catagagaaattggaacaccaatttctacagacaa	Protospacer
***************** *****************

15. spacer 9.6|1274510|20|CP029685|PILER-CR matches to position: 1274341-1274360, mismatch: 1, identity: 0.95

tcaccaattccaacaaacaa	CRISPR spacer
tcaccaattccaacagacaa	Protospacer
***************.****

16. spacer 10.1|1278564|26|CP029685|CRISPRCasFinder matches to position: 322031-322056, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cgggcccccaacatagaagctggcgg	Protospacer
**** *********************

17. spacer 10.1|1278564|26|CP029685|CRISPRCasFinder matches to position: 910092-910117, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagcaggcgg	Protospacer
******************** *****

18. spacer 12.2|2456177|36|CP029685|CRT matches to position: 1940164-1940199, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

19. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 322163-322191, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

20. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 996997-997025, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

21. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 1080018-1080046, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

22. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 1278472-1278500, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttctttttgaaa	Protospacer
********.***************.****

23. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 1754941-1754969, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

24. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 2106451-2106479, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

25. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to position: 2647705-2647733, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

26. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to position: 322031-322056, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttgggggcccg	Protospacer
************.******** ****

27. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to position: 910092-910117, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctatgttggggccccg	Protospacer
***** ******.*************

28. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to position: 1060322-1060347, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccaccagcctctgtgttggggccccg	Protospacer
**.*****.*****************

29. spacer 7.1|1060378|26|CP029685|CRT matches to position: 910036-910061, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*****************.** *****

30. spacer 7.3|1060492|26|CP029685|CRT matches to position: 475480-475505, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacaaagaagctgacga	Protospacer
************* ********.***

31. spacer 9.5|1274607|35|CP029685|CRT matches to position: 900546-900580, mismatch: 2, identity: 0.943

catagagaaattggaaccccaatttctacagacaa	CRISPR spacer
catagagaaattggattcccaatttctacagacaa	Protospacer
*************** .******************

32. spacer 9.5|1274607|35|CP029685|CRT matches to position: 947136-947170, mismatch: 2, identity: 0.943

catagagaaattggaaccccaatttctacagacaa	CRISPR spacer
catagagaaattggattcccaatttctacagacaa	Protospacer
*************** .******************

33. spacer 9.5|1274607|35|CP029685|CRT matches to position: 2762824-2762858, mismatch: 2, identity: 0.943

catagagaaattggaaccccaatttctacagacaa	CRISPR spacer
catagagaaattggattcccaatttctacagacaa	Protospacer
*************** .******************

34. spacer 10.1|1278564|26|CP029685|CRISPRCasFinder matches to position: 910036-910061, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*************.****** *****

35. spacer 10.1|1278564|26|CP029685|CRISPRCasFinder matches to position: 910148-910173, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacataaaagcaggcgg	Protospacer
***************.**** *****

36. spacer 12.1|2456121|33|CP029685|CRT matches to position: 947080-947112, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

37. spacer 12.1|2456121|33|CP029685|CRT matches to position: 1278521-1278553, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

38. spacer 12.1|2456121|33|CP029685|CRT matches to position: 1486606-1486638, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

39. spacer 12.1|2456121|33|CP029685|CRT matches to position: 1575883-1575915, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

40. spacer 12.1|2456121|33|CP029685|CRT matches to position: 2095707-2095739, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

41. spacer 12.1|2456121|33|CP029685|CRT matches to position: 2728559-2728591, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

42. spacer 12.2|2456177|36|CP029685|CRT matches to position: 322156-322191, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

43. spacer 12.2|2456177|36|CP029685|CRT matches to position: 1754941-1754976, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

44. spacer 12.2|2456177|36|CP029685|CRT matches to position: 2106451-2106486, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

45. spacer 12.3|2456236|33|CP029685|CRT matches to position: 947080-947112, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

46. spacer 12.3|2456236|33|CP029685|CRT matches to position: 1278521-1278553, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

47. spacer 12.3|2456236|33|CP029685|CRT matches to position: 1486606-1486638, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

48. spacer 12.3|2456236|33|CP029685|CRT matches to position: 2095707-2095739, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

49. spacer 12.3|2456236|33|CP029685|CRT matches to position: 2728559-2728591, mismatch: 2, identity: 0.939

cattattgtaagctgactttctgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********************..***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP029685_7 7.4|1060548|53|CP029685|CRT 1060548-1060600 53 MG543995 Staphylococcus phage UPMK_1, partial genome 76246-76298 4 0.925
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 NZ_CP034332 Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence 3359-3384 5 0.808
CP029685_5 5.1|947044|26|CP029685|CRISPRCasFinder 947044-947069 26 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 715511-715536 5 0.808
CP029685_7 7.3|1060492|26|CP029685|CRT 1060492-1060517 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
CP029685_4 4.1|941642|29|CP029685|CRISPRCasFinder 941642-941670 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
CP029685_9 9.1|1274382|35|CP029685|CRT 1274382-1274416 35 KY971610 Pseudomonas phage PspYZU05, complete genome 73937-73971 11 0.686

1. spacer 7.4|1060548|53|CP029685|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgagaaactatcatttctgtcccactccctt	Protospacer
************************ **** *********************  

2. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

3. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtctgggcctac	Protospacer
****************. *****.  

4. spacer 5.1|947044|26|CP029685|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtttggccctga	Protospacer
***************** ** **. .

5. spacer 7.3|1060492|26|CP029685|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcga	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.***************** 

6. spacer 4.1|941642|29|CP029685|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

7. spacer 9.1|1274382|35|CP029685|CRT matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 11, identity: 0.686

cagagagaaataggatcaccaatttcaacagacaa	CRISPR spacer
ccacatgaaatagggtcaccaatttgaacagcttt	Protospacer
* . . ********.********** ***** .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 12782 : 72104 55 Streptococcus_phage(20.0%) tRNA,transposase NA
DBSCAN-SWA_2 379840 : 454180 109 Staphylococcus_phage(86.24%) head,capsid,integrase,portal,holin,terminase,tail attL 381047:381106|attR 412890:432607
DBSCAN-SWA_3 518890 : 534903 16 Streptococcus_phage(76.92%) integrase attL 514798:514812|attR 530727:530741
DBSCAN-SWA_4 538055 : 544229 9 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 878671 : 886491 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_6 898463 : 913250 18 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_7 989983 : 1013301 31 Staphylococcus_phage(80.95%) coat,integrase,transposase,terminase attL 1001028:1001046|attR 1015590:1015608
DBSCAN-SWA_8 1105485 : 1160352 57 Streptococcus_phage(28.57%) holin,bacteriocin,protease,tRNA NA
DBSCAN-SWA_9 1179246 : 1187719 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_10 1726563 : 1734875 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_11 1804014 : 1813057 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_12 1945227 : 2020279 74 Staphylococcus_phage(94.74%) protease,tRNA,transposase NA
DBSCAN-SWA_13 2121141 : 2206093 112 Staphylococcus_phage(94.87%) head,capsid,integrase,portal,holin,protease,terminase,tail attL 2169969:2169986|attR 2196016:2196033
DBSCAN-SWA_14 2740102 : 2796486 53 Enterobacteria_phage(25.0%) holin,protease,transposase NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP029685.1|AWW97728.1|2743740_2743845_-|hypothetical-protein 2743740_2743845_- 34 aa aa NA NA NA 2740102-2796486 yes