CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP030171	Klebsiella quasipneumoniae subsp. quasipneumoniae strain A708 chromosome, complete genome	3 crisprs	csa3,cas3,RT,DEDDh,DinG,WYL	0	3	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP030171_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030171_2

4472926-4473017

Orphan

Consensus_repeat	Method
GCCAGCGCGCCACGCGCGCTCGGGTGGACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030171_2

>merge|CP030171|2|4472926-4473017|CRISPRCasFinder
GCCAGCGCGCCACGCGCGCTCGGGTGGACCGGGGGCCGAGGGTGCCGTGATCGGCAACATTGCCAGCGCGCCACGCGCGCGCGGGTGGACCG

>CP030171|2|2|4472926-4473017|CRISPRCasFinder
GCCAGCGCGCCACGCGCGCTCGGGTGGACCG	GGGGCCGAGGGTGCCGTGATCGGCAACATT
GCCAGCGCGCCACGCGCGCGCGGGTGGACCG

Protein	Signature genes	Signature genes Name	Protein_function
CP030171.1\|AWX89141.1\|4467743_4470269_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374266
CP030171.1\|AWX89146.1\|4473993_4474932_+\|phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132472
CP030171.1\|AWX89142.1\|4470294_4470963_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376075
CP030171.1\|AWX89136.1\|4462370_4463180_+\|cysteine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270407
CP030171.1\|AWX89138.1\|4464738_4465428_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP030171.1\|AWX89152.1\|4479854_4480421_+\|lipoprotein-nlpC	unknown	unknown	gnl\|CDD\|236773
CP030171.1\|AWX89153.1\|4480465_4481518_-\|phosphoporin-PhoE	unknown	unknown	gnl\|CDD\|182275
CP030171.1\|AWX89139.1\|4465431_4466142_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225663
CP030171.1\|AWX89145.1\|4473128_4473971_+\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226164
CP030171.1\|AWX89147.1\|4474998_4475871_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
CP030171.1\|AWX90281.1\|4476893_4477229_+\|hypothetical-protein	unknown	unknown	unknown
CP030171.1\|AWX89150.1\|4477812_4478478_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP030171.1\|AWX89144.1\|4471682_4472225_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
CP030171.1\|AWX90280.1\|4464005_4464749_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
CP030171.1\|AWX89143.1\|4471021_4471609_-\|common-pilus-major-fimbrillin-subunit-EcpA	unknown	unknown	gnl\|CDD\|374549
CP030171.1\|AWX89149.1\|4477351_4477720_+\|hypothetical-protein	unknown	unknown	unknown
CP030171.1\|AWX89137.1\|4463181_4464000_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
CP030171.1\|AWX89140.1\|4466110_4467754_-\|hypothetical-protein	unknown	unknown	unknown
CP030171.1\|AWX89151.1\|4478573_4479443_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
CP030171.1\|AWX89148.1\|4475867_4476752_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441

Protein	Function_ID	Function_description	E-value
CP030171.1\|AWX89141.1\|4467743_4470269_-\|hypothetical-protein	gnl\|CDD\|374266	pfam15976, CooC_C, CS1-pili formation C-terminal. CooC_C is a highly conserved C-terminal domain on fimbrial outer membrane usher proteins like TcfC. The protein is required for CS1 pilus formation.	2.00351e-32
CP030171.1\|AWX89146.1\|4473993_4474932_+\|phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132472	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein. This model is a subset of the broader subfamily of phosphate/phosphonate binding protein ABC transporter components, TIGR01098. In this model all members of the seed have support from genomic context for association with pathways for the metabolims of phosphonates, particularly the C-P lyase system, GenProp0232. This model includes the characterized phnD gene from E. coli. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.	1.97805e-101
CP030171.1\|AWX89142.1\|4470294_4470963_-\|hypothetical-protein	gnl\|CDD\|376075	pfam18649, EcpB_C, EcpB C-terminal domain. This is an immunoglobulin like domain found at the C-terminal region of EcpB. It is a periplasmic chaperone which along with EcpE help assemble the E. coli common pilus (ECP) EcpA and EcpD subunits. The C-terminal domain is predicted to contain residues that might be involved in binding a C-terminal carboxylate anchor.	8.40103e-43
CP030171.1\|AWX89136.1\|4462370_4463180_+\|cysteine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270407	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold. This group includes periplasmic glutamine-binding domain GlnP from Bacillus subtilis and its related proteins. The GlnP domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.59154e-109
CP030171.1\|AWX89138.1\|4464738_4465428_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.33052e-44
CP030171.1\|AWX89152.1\|4479854_4480421_+\|lipoprotein-nlpC	gnl\|CDD\|236773	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.	3.40953e-39
CP030171.1\|AWX89139.1\|4465431_4466142_-\|hypothetical-protein	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	0.00297027
CP030171.1\|AWX89145.1\|4473128_4473971_+\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	1.73973e-118
CP030171.1\|AWX89147.1\|4474998_4475871_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	1.39607e-90
CP030171.1\|AWX89150.1\|4477812_4478478_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	6.09988e-67
CP030171.1\|AWX89144.1\|4471682_4472225_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	1.5725e-09
CP030171.1\|AWX90280.1\|4464005_4464749_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.08074e-52
CP030171.1\|AWX89143.1\|4471021_4471609_-\|common-pilus-major-fimbrillin-subunit-EcpA	gnl\|CDD\|374549	pfam16449, MatB, Fimbrillin MatB. This is a family of fimbrial proteins.	6.52261e-81
CP030171.1\|AWX89153.1\|4480465_4481518_-\|phosphoporin-PhoE	gnl\|CDD\|182275	PRK10159, PRK10159, phosphoporin PhoE.	0
CP030171.1\|AWX89137.1\|4463181_4464000_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.28367e-138
CP030171.1\|AWX89151.1\|4478573_4479443_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	2.47841e-09
CP030171.1\|AWX89148.1\|4475867_4476752_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	2.52031e-86

>CP030171.1|AWX89144.1|4471682_4472225_-|LuxR-family-transcriptional-regulator
MEYKSCSDKYIWSAHDSYFYKGLSELIVDIDELIYLSLEKIRRDFVFINLNTASLNEFIRRDSEWLSAVKGKQVVLIAARKSEALANYWYYNSDIRGVVYVGLSRDIRKELAYVINGRFLRKDIKKDKITDREMKIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ
>CP030171.1|AWX89143.1|4471021_4471609_-|common-pilus-major-fimbrillin-subunit-EcpA
MKKKVLAIALVTAFTGMGVAQAADVTAQAVATWSATAKKDTTSKLVVTPLGSLAFQYAEGVKGFNSQKGLFDVAIEGDATATAFKLTSRLITNTLTQLDTSGSTLSVGVDYNGAAVEKTGDTVMIDTANNILGGNLSALANGYNASGRTTAQDGFTFSIISGTTDGTTAVTDYSTLPEGIWSGDVSVQFDATWTS
>CP030171.1|AWX89142.1|4470294_4470963_-|hypothetical-protein
MKKHLLALGLLLAGVSPAQALDVGDISSFMNSGSSTLSKTIKNSTDSGRLINIHLERLSSPLDDGQVIPMDKPDEVLLTPASLLLPAQASDVIRFFYKGPADDKERYYRIVWFDQALSDAQRDNATRSAVATASARIGTILVVAPRQVNYRFQYANGSLTNTGNATLRILAYGPCLKTAEGKECKENYYLMPGKSRRFTRVDTADKKGRVALWQGEQFVPVK
>CP030171.1|AWX89141.1|4467743_4470269_-|hypothetical-protein
MPLQRISPGLKTRLAFGMFFLFVQPDASAAAPGAQQIGGVIIPQAFSQALQDGMSVPLFIHLAGSQDTRDDQRIGSAFIWLDGGQLRVRQIRLEDNEGNASVSEQTRQQLTGLANAPFSEALTITLTDSAQLDLSLRQLLLQLVVKREALGTVLRSRSEDIGQSSVNALSSNLSYNLGVYNNQMRNGGSNTSSYLSLNNVTALREHHVVLDGSLYGIGSGQQDSELYKAMYERDFAGHRFAGGMLDTWNLQSLGPMAAISAGKIYGLSWGNQASSTVFDNSQSATPVIAFLPAAGEVHLTRDGRLLSVQNFAMGNHEVDTRGLPYGIYDVEVEVIVNGRVVSKRTQRVNKLFSRGRGAGAPLAWQVWGGSFHMDRWSESGKKTRPAKESWLAGLSASGSLSTLSWAATGYGYDNQAVGETRLTLPLGESINVNLQNMLASDSSWSSVGSISATLPGGFSSVWVNQERTRIGDQLRRSDADNRAIGGTLNLNALWSKLGTFSVSYNDDRRYNSHYYTADYYQTVYSGAFGSLGLRAGIQRYNNGDSSANTGKYIALDLSLPLGNWFSAGMTHQNGYTMANLSARKQFDEGTIRTIGANLSRAISGDTGDDKTLSGGAYAQFDARYASGTLNVNSAADGYVNTNLTASGSVGWQGKNIAASGRTDGNAGVIFNTGLEDDGQISARVNGRIFPLSGKRNYLPLSPYGRYEVELQNSKNSLDSYDIVSGRKSHLTLYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFSYGGNKTCEVALELSQARGAVWVGDVVCSGLSSWAAAQQTGEENES
>CP030171.1|AWX89140.1|4466110_4467754_-|hypothetical-protein
MKVNPLIALAILALLWPAAALRAAVSKTTWSDAPAREFVFVENNSDDNFFVTPGGALDPRMTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLNANWKFDMWLENSPVSHPLTGLRCINWYAGCDMATSLILPQTTDASGFYGATVTSGGAKWMHGMMSDAFYQYLQQMPVGGSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAASLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSSDAIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTSAPSREGYVGSGEPALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCLFSSDDGTAKVPFPATLSFITRSGATQTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
>CP030171.1|AWX89139.1|4465431_4466142_-|hypothetical-protein
MSRRRGATLTKALLTVGCLLVAPLAQAISVGNLTFSLPAEADFASKRVVNNNKSARLYRIAVSAIDRPGGSEVRSRPVDGELLFAPRQLALQAGESEYFKFYYHGPRDNRERYYRVSFREIPTRNLTRRGPTGGEVSMEPVVVMDTILVVRPREVQFKWSFDKVAGTVSNTGNTWFKLLIKPGCDSTEEEGDAWYLRPGDVVRQPALRQPGNHYLVYNDKFIKISDTCPLKPRPAE
>CP030171.1|AWX89138.1|4464738_4465428_+|amino-acid-ABC-transporter-permease
MNANLAVIADNLDYLLWGRLAEGQPGGVALTLLMAIGATLLALPGGIALAGLAWRCGGLTRRLLFLWAEIIRGIPLIFVIFWLWYLLPMLTGGDLPGAVTVTLALAWFTAASVMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPLAIFVFTGAVYYLLCCGLSLLTSRRFTRRATAG
>CP030171.1|AWX90280.1|4464005_4464749_+|amino-acid-ABC-transporter-permease
MLDWHGVLSGQPLQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVAAWVSLFRNTPLLVQLLFWYFAAWNLLPLAVKNVVNDEHAWSILPGNVWWLTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRLGPGRKLQRSAQHER
>CP030171.1|AWX89137.1|4463181_4464000_+|amino-acid-ABC-transporter-ATP-binding-protein
MFSGLFSHSAAPAADFSRLQRASITFREVAKRYGDHQVLNAINLQVDPGEVVAILGPSGSGKSTLIRLINQLESLSGGEILIDGKPTSRLSGSALRQLRSRVGFVFQQFNLYAHLTAQENITLALERVHGWGKSAAQERALALLRQVGLEEKAQQMPAQLSGGQQQRVAIARALASSPQIILFDEPTSALDPEMIGEVLQVMKNLAHSGITMLVVTHEMQFAREIADRVVFIDGGDILEVAPPAEFFAHPQHARARRFLQKVLDPLHQESLE
>CP030171.1|AWX89136.1|4462370_4463180_+|cysteine-ABC-transporter-substrate-binding-protein
MRNKTTKIALALGMLLLASQAQADQLADIKAAGVVKVATFDANPPFGSVDAKTHHIVGYDVDFAQALAKALGVKLELVATNPANRIPLLQSGKADLIVADITITPERAQVIDFSTPYFVTGQQFLVPAGSPDKLDEYSKARIGAVKGTTGEQALHQRFPQARVLSYDDIPLALTALRNGNVQAITQDSTILAGLLAEAPDKAKFKILPDLLSKEEIGVGVKKGEPALLKAVNDELVKLEKTGEAAKIYDVWFGPATKTPQPRAFTIEAK
>CP030171.1|AWX89145.1|4473128_4473971_+|phosphonate-ABC-transporter-ATP-binding-protein
MNSSLAAVAETDFQPFTDLNAGRQRKVLSVRNLSKAYEAQHKVLDSISFDLHAGEMVGVIGRSGAGKSTLLHVLNGTHSASGGEILSYPEVGTPHDVSRLKGRALNAWRSHCGMIFQDFCLVPRLDVLTNVLLGRLSQTSTLKSLFKIFPAADRARAIALLEWMNMLPHALQRAENLSGGQMQRVAICRALMQNPGILLADEPVASLDPKNTQRIMDVLREISEQGISVMVNLHSVELVRTYCTRVIGVANGQLIFDDHPSRLTQDVLQQLYGDDVSQLH
>CP030171.1|AWX89146.1|4473993_4474932_+|phosphonate-ABC-transporter-substrate-binding-protein
MKKYMTGAVRLSAMVAGMMMAWQAAAAQPKELNLGILGGQNATQQIGDNQCVKTFLDKELNVDTKLRNSSDYSGVIQGLLGGKVDVVLSMSPSSYASVYLNNPKAVDIVGIAVDDKDQSRGYHSVVIVKADSPYKTLDDLKGKAFGFADPDSTSGYLIPNHAFKEKFGGNADNKYNNTFSSVTFSGGHEQDILGVLNGQFAGAVTWASMVGDYNTGYTTGAFNRLIRMDHPDLMKQIRIIWQSPLIPNGPILVSNALPADFKAKVVAAVKKLDTEDHACFIKAMGGTQHIGPGSVADFQQIIDMKRELVSAR
>CP030171.1|AWX89147.1|4474998_4475871_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MKTTHIEFERYYQQIRSRQKRDAVCWSLLLLALYFAAGSAAEFNLLTIWHSLPHFLDYMAETIPPLSAGNLFADVQTKGSLAWWGYRLPIQLPLIWETLQLALASTLVAVAIATVFAFLAANNAWSPAPVRFAIRVLVAFLRTMPELAWAVIFVMAFGIGAIPGFLALMLHTVGSLTKLFYEAVESAQNKPVRGLAACGASPLQKIRFALWPQVKPLFLSYGFMRLEINFRSSTILGLVGAGGIGQELMTNIKLDRYDQVSITLLLIILVVSALDMLSGRLRLWVLEGKK
>CP030171.1|AWX89148.1|4475867_4476752_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MSVWHMQPDIAASRRQHKQLYQVQGRYLRYVGLVALACVLYYVWFFLQFGISGEQLTTGLQQIGRYLARMFVWHDFWNWPFGYYFTQIGITLAIVFAGTLTATVLALLLSFFAARNIMRGMVLGTLALLMRRLFDVLRGIDMAIWGLIFVRAVGLGPLAGVLAIIMQDTGLLGRLYAEGHEAVDRSPGRGLTAVGANGLQKHRFGIFTQSFPTFLALSLYQIESNTRSAAVLGFVGAGGIGLIYAENMRLWNWDVVMFITLLLVAVVMIMDTLSAWLRRRYIGGAVVPLYQEER
>CP030171.1|AWX90281.1|4476893_4477229_+|hypothetical-protein
MRLTWPTFLRPVVNLFTIVAETAGAGGLKIAETFPEGRGSPHGCGLRAVFCMDAASARPEACRDKSKGPRSGDFAGRSPGVQGAAATGRPLCAPCAIRDITQKTNRERKLR
>CP030171.1|AWX89149.1|4477351_4477720_+|hypothetical-protein
MLPGGGCALPGLEDPLTGSHPVGPRKRSAAGRDARRSTRDVAGWRLRLTRPTSSSHRLTPRRPAQAQRRRATTAGTKPPLCRMATHALSGLQRLNPQKHLSAPLFQPPAQSVGPRKRSAAGQ
>CP030171.1|AWX89150.1|4477812_4478478_-|HAD-IB-family-hydrolase
MGNTLTIFDLDNTLIQGDSSTIWSQFMVREGLATQKGYLAREARLMADYDRGEMNIADYVALIQAPLAGIPKSDVDALVARCVREAILPRVYPQAWELIRRLRAEGEQMLIISASVSLLVQAVAAALEIEQALGIDVAMVDGGYSGEIAGIPSYQQGKVARLAQWREAHPQYDGEVTFYTDSINDLPLCLHADRVRLVNPCPQLQAAGAGYGWPVLSWLLE
>CP030171.1|AWX89151.1|4478573_4479443_-|EamA-family-transporter
MHVRYSLLASQATTATFVLLWGSAAIFTRWGLDNASPMALLVFRFLVALAALAPLAIARRRWLPAPGTRLQTAATGLMLIGGYSVCYFEAMANGVTPGLIATIMGIQPILTLCVVERRLQGRRLLGLLIALAGLVLLVWRSLVASPMAMTGILFALAALLLMTFGALWQKRSRQSPADVLPLQYAVSLGLCLLIAPVSGFRFTVNAGLIIPVLFLGLLISVVAQLLLYHLLSAGNIVNVTSLFYLVPAITALLDYLLLGNRLPAAAMVGMVAIVGGIVLVFRTGKVRAG
>CP030171.1|AWX89152.1|4479854_4480421_+|lipoprotein-nlpC
MKPKLKHALLLIPFLLLAGCSSSPKQAKHTKSHADMTIDGGSDDLIPVVAALHDQMHTWQGTPYEWGGTEQSGVDCSGFVWRTLKDRFNLPMERITTRELLHMGVRVDKRDLRPGDLVFFRTRAGMHVGFYDTDHNFLHASSSQGVMRSSLDNPYWESAFYQARRLPKEYNAQITMNSDTLHLAKNRR
>CP030171.1|AWX89153.1|4480465_4481518_-|phosphoporin-PhoE
MKKSTLALMMMGFVASTATQAAEVYNKNANKLDVYGKIKAMHYFSDYDSKDGDQTYVRFGIKGETQINEDLTGYGRWESEFSGNKTESDSSQKTRLAFAGLKLKNYGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFFGLVDGLDMTLQYQGKNEGREAKKQNGDGVGTSLSYDFGGSDFAVSAAYTSSDRTNDQNLLARGQGSKAEAWATGLKYDANNIYLATMYSETRKMTPISGGFANKAQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGVGSEDLVNYIDVGLTYYFNKNMNAFVDYKINQLKSDNKLGINDDDIVALGMTYQF

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Crispr_ID: CP030171_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030171_3

4873325-4873465

Orphan

Consensus_repeat	Method
CCGCGACGTTCGGTAGCCCGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030171_3

>merge|CP030171|3|4873325-4873465|CRISPRCasFinder
CCGCGACGTTCGGTAGCCCGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGGTGACGGCGCTCCGCGCCTTACCCGGGCTACACAACCCGCGACGTTCGGTAGCCAGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGG

>CP030171|3|3|4873325-4873465|CRISPRCasFinder
CCGCGACGTTCGGTAGCCCGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGG	TGACGGCGCTCCGCGCCTTACCCGGGCTACACAAC
CCGCGACGTTCGGTAGCCAGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP030171.1\|AWX89493.1\|4877747_4878668_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
CP030171.1\|AWX89492.1\|4876128_4877733_-\|aldehyde-dehydrogenase-(NADP(+))	unknown	unknown	gnl\|CDD\|143447
CP030171.1\|AWX89494.1\|4878819_4879644_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
CP030171.1\|AWX89495.1\|4879954_4880902_+\|4-hydroxyproline-epimerase	unknown	unknown	gnl\|CDD\|172473
CP030171.1\|AWX89482.1\|4865506_4866040_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP030171.1\|AWX89485.1\|4867556_4868429_-\|2-oxo-3-deoxygalactonate-kinase	unknown	unknown	gnl\|CDD\|377446
CP030171.1\|AWX89498.1\|4882248_4883511_+\|FAD/NAD(P)-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
CP030171.1\|AWX89484.1\|4866970_4867570_-\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	unknown	unknown	gnl\|CDD\|181670
CP030171.1\|AWX89497.1\|4882004_4882268_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|379229
CP030171.1\|AWX89491.1\|4874511_4876113_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
CP030171.1\|AWX89487.1\|4870012_4870405_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
CP030171.1\|AWX89488.1\|4870415_4871855_-\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
CP030171.1\|AWX89489.1\|4872055_4873276_+\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
CP030171.1\|AWX89499.1\|4883514_4883955_-\|homoprotocatechuate-degradation-operon-regulator-HpaR	unknown	unknown	gnl\|CDD\|188209
CP030171.1\|AWX89486.1\|4868425_4869910_-\|sodium:solute-symporter-family-protein	unknown	unknown	gnl\|CDD\|271357
CP030171.1\|AWX89490.1\|4873483_4874500_-\|Ldh-family-oxidoreductase	unknown	unknown	gnl\|CDD\|376860
CP030171.1\|AWX89483.1\|4866110_4866974_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
CP030171.1\|AWX89480.1\|4861778_4864544_-\|Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226443
CP030171.1\|AWX89496.1\|4880898_4882008_+\|D-amino-acid-oxidase	unknown	unknown	gnl\|CDD\|223737
CP030171.1\|AWX89481.1\|4864643_4865474_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
CP030171.1\|AWX89493.1\|4877747_4878668_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	9.48902e-100
CP030171.1\|AWX89492.1\|4876128_4877733_-\|aldehyde-dehydrogenase-(NADP(+))	gnl\|CDD\|143447	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.	0
CP030171.1\|AWX89494.1\|4878819_4879644_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.02124e-26
CP030171.1\|AWX89495.1\|4879954_4880902_+\|4-hydroxyproline-epimerase	gnl\|CDD\|172473	PRK13970, PRK13970, 4-hydroxyproline epimerase.	3.37281e-152
CP030171.1\|AWX89482.1\|4865506_4866040_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.63261e-14
CP030171.1\|AWX89485.1\|4867556_4868429_-\|2-oxo-3-deoxygalactonate-kinase	gnl\|CDD\|377446	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase. 2-keto-3-deoxy-galactonokinase EC:2.7.1.58 catalyzes the second step in D-galactonate degradation.	3.58295e-114
CP030171.1\|AWX89498.1\|4882248_4883511_+\|FAD/NAD(P)-binding-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	1.28099e-22
CP030171.1\|AWX89484.1\|4866970_4867570_-\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	gnl\|CDD\|181670	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed.	4.23644e-108
CP030171.1\|AWX89497.1\|4882004_4882268_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|379229	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain. The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.	4.21552e-21
CP030171.1\|AWX89491.1\|4874511_4876113_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	2.95512e-48
CP030171.1\|AWX89487.1\|4870012_4870405_-\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	9.9047e-31
CP030171.1\|AWX89488.1\|4870415_4871855_-\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	2.20892e-153
CP030171.1\|AWX89489.1\|4872055_4873276_+\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	0
CP030171.1\|AWX89499.1\|4883514_4883955_-\|homoprotocatechuate-degradation-operon-regulator-HpaR	gnl\|CDD\|188209	TIGR02337, Homoprotocatechuate_degradative_operon_repressor., homoprotocatechuate degradation operon regulator, HpaR. This Helix-Turn-Helix transcriptional regulator is a member of the MarR family (pfam01047) and is found in association with operons for the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate.	4.17885e-59
CP030171.1\|AWX89486.1\|4868425_4869910_-\|sodium:solute-symporter-family-protein	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	2.45312e-87
CP030171.1\|AWX89490.1\|4873483_4874500_-\|Ldh-family-oxidoreductase	gnl\|CDD\|376860	pfam02615, Ldh_2, Malate/L-lactate dehydrogenase. This family consists of bacterial and archaeal Malate/L-lactate dehydrogenase. L-lactate dehydrogenase, EC:1.1.1.27, catalyzes the reaction (S)-lactate + NAD(+) <=> pyruvate + NADH. Malate dehydrogenase, EC:1.1.1.37 and EC:1.1.1.82, catalyzes the reactions: (S)-malate + NAD(+) <=> oxaloacetate + NADH, and (S)-malate + NADP(+) <=> oxaloacetate + NADPH respectively.	3.01448e-122
CP030171.1\|AWX89483.1\|4866110_4866974_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.08988e-73
CP030171.1\|AWX89480.1\|4861778_4864544_-\|Fis-family-transcriptional-regulator	gnl\|CDD\|226443	COG3933, COG3933, Transcriptional antiterminator [Transcription].	6.03344e-152
CP030171.1\|AWX89496.1\|4880898_4882008_+\|D-amino-acid-oxidase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.24709e-48
CP030171.1\|AWX89481.1\|4864643_4865474_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.05026e-15

>CP030171.1|AWX89489.1|4872055_4873276_+|amino-acid-deaminase
MKYHSAPLIPHKSALMSAPANLLAEEVCLPAALLKKSALENNISWMQRYADARGVSLAPHGKTTMTPWIFQAQQRAGAWGIGVGSAWQASAAMASGIQRVLMVNQLVGKANMQVVAQLKAHYRAVDFICCVDSETNVRALSAFFAAQGQTLDVLIELGVRGGRCGCRSVDDALALAQRVSDLPGLRLRGLELYEGVLHGDDPQPQVEALLQQAAALACRMEPLVDGEFILTGAGTVWYDVVCNIWLAAAKPRRCRIVIRPGCYITHDRGIYDLAQQALIARDPIACDLAGDLTSALELMAMVQSVPEADRAVVNFGKRDCAFDAGLPQPIAHYRNGQQLALRAESIVSIGIMDQHCMLRLAPGSDVQVGDILLFGTSHPCLTFDKWKTLLLVDDDYNVLDELDTLF
>CP030171.1|AWX89488.1|4870415_4871855_-|D-aminoacylase
MKVDWLFKNVTVIDGSGGPQYRADVAVKGDRIMAIAPALDVAAEQEIDGQGRVLAPGFIDVHTHDDINVIRMPEYLPKLSQGVTTVIVGNCGISAATATMRGEVPDPMNLLGERQHFIYPTVEAYAHAVEAARPSLNVGTLIGHTALRNNHMDDLFRPASETEIAGMRIQLRDALRQGALGLSTGLAYASAFQSTTEEVMALAEELTAEGGIYTTHLRSEFEPILEALDEAFRIGRHGNVPVVVSHHKCAGAKNWGRTKETLAFFDEMRQRQEIACDCYPYSASSSTLDMKQVTDEFDIVITWSEAQPEQAGKTLQQIADEWQVSLHDAAARLMPAGAIYYNMDEQDVRRVLGYPVTMIGSDGLPNDPMPHPRLWGAFPRVLGHYCRDERLFPLTTAIHKMTGLSSARFQLADRGLVKVGYYADLVLFDPLTVRDVASFSDPKRPADGIEAVMVNGVMSYGSDKKIIGRAGRFLRRRMN
>CP030171.1|AWX89487.1|4870012_4870405_-|RidA-family-protein
MSIKRYGVEGGTGTGGQHLPFARAVEAGGWLYVSGQTPMKDGEVVEGGIVDQSRLAIQNCVDIMTEAGYTLADVVHVKVILTDARYFQSFNKVFREFFGDNPPARICCVADLVVDCKVEVDVTCYNASRA
>CP030171.1|AWX89486.1|4868425_4869910_-|sodium:solute-symporter-family-protein
MNSHVFLVGFIIYALAMIWLGWYVSRHQKSGEDFLLGGRSLPLFLTLGSTVATMVGTGSSMGAVGFGYSNGWAGMLYGVGGAIGILLVAWLFAPVRKLRFMTMSEELSYYTGGSHLIKNLVGIMIFIASIGWLGAHILGGSMYLAWATGINLTVAKIIIAMAFAIYVIIGGYSAVVWTDTIQALILFFGFILMAILAVVHVGGWDAIVQAMDPKAMSLFAVDKLGTIPALSLAMVIGVGVLATPSYRQRIYSGKDVSSVRRSFVYTGVLYLFFSVLPAIIGMAAWTMNPNLENSNYAFLFATSFLPAILGLVVLIAGLSATMSSASSDAIAAVAIMMRDVYTLVTGKMPPAHKAITLSRWMLAFVIGLAMIFALTSNDIISYITKMISMLMSGLFVCSILGRFWLRFNWQGALTALLSGMLVSIVVLVKADWLAYWGNPCIPSVVGSFVSAIFVTVMTPASKISRQQALEMITQEREGEAIPAKTAVQVSGEAQ
>CP030171.1|AWX89485.1|4867556_4868429_-|2-oxo-3-deoxygalactonate-kinase
MKDYIAVDWGSTQLRGWLIRNGQCVETKQLPLGITRLNGRSPADVFAEHLAPWRGSQALPVLMAGMIGSDAGWQAVPYLDCPAAIDAPGRQLCAVAEGVWIIPGLKIEQDRDFNVMRGEETQLLGACQLAPAECYVLPGTHCKWVQVAGGEVRHFATAMTGELHHLLMTQSLIGKGLPAQQPDEAAFERGLEKGLAQPSLISELFVARAARVLGGLAASSVSDYLSGLLIGAEVATLGQRFRASAVTLVGDPALNARYGRAMKARGMTVNSCSGDEALLAGMARIMHEQD
>CP030171.1|AWX89484.1|4866970_4867570_-|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase
MNKIKLVAILRGIQPAEAADHIETLINAGFRYIEIPLNSPDWQQSIPQMVARFGEQAMIGAGTVLRVEQVDFLAEAGARLIVTPNTQPAVIRQAVAHGMQVCAGCATATEAFNALDAGAQWLKIFPSSAFGPDYIRALKAVLPSEVPVLAVGGVTPENLATWMRAGCAGAGLGSDLYRAGQAVERTRLQAERFIAAAGG
>CP030171.1|AWX89483.1|4866110_4866974_+|MurR/RpiR-family-transcriptional-regulator
MSWSIDIISCITDRFVELTATEKRIAQFILDDVAAAAELPIAEIARLTQTSQASVTRFARALGCKDVRELKMKLAQSLAVGQRFILDVPDLEGVQGIYESIISVLETNRRALDIEALKRAVSWLSAARQILALGMGGGSTICAQEIQYRLFRLGLPVVSQSDGLLVRMMSSAVTPQDVVIVLSLGGYTPEIIESAAIASQYGAKVIAITPAGTPLAEQADLVLPLLVRENDYIFKPSTSRYAMLAMVDVLATELAMANKTQAKGKLRRIKLALDSHRGGVDRQPLGD
>CP030171.1|AWX89482.1|4865506_4866040_+|GNAT-family-N-acetyltransferase
MKTNTITAGAGLRLTEESDIALLPAIERSAAQAFRQIPALAWLADSEVISVARHHDYLETEHSLLAVAAGQPVGFILTEPLDDALFIAEIAVHQAWQHQGIGRMLLEQVIERARQMAYPAVTLTTFREVPWNAPFYTRLGFAILDELTLPAGLAAKREQETRHGLPPETRCAMRLAL
>CP030171.1|AWX89481.1|4864643_4865474_-|GNAT-family-N-acetyltransferase
MELTAVPATQFSSVQLTDILNACFEAYLVPVTQSVEGFVQRFSAEGMSLIDSRVWLAGDEPAAIAIVARRGNMARLAAFALRPAWRGKGLGRKLMQELLTFLQQQEIETVSLEVIRDNHAAVALYQSLGFTRRYGLCGYLSAEPLAAAPGVLQPYPILALLRRAVEESNSQLPWLMDPLTFATLPCRVVTLEQRAFAVLSTSGSRPVLQFLWVEPAARRQGLAQALLMALAQQFPGIGTSVTVPETFTPLFAAAGYAPLSLQQYEMTMECAAAKSA
>CP030171.1|AWX89480.1|4861778_4864544_-|Fis-family-transcriptional-regulator
MRKTELLAFLQNQTDFFDPDNLSDVFTASWLAQRFAMQRNTASHYLNQLVAQDVLVKINTRPVYFLHKKAFCQQFFPLSRSEYASMAELLAESDRQPEQADHFSLLTGHDGSLRKPIEQMKTALFYPNGGLPLLIVGDSGTGKSYMAELMHEFAIAQGLLAPDAPFVSFNCAQYASNPELLAANLFGYVKGAFTGAQSDKAGVFEAANGGMLFLDEVHRLDAQGQEKLFTWLDRKEIYRVGETAHGLPISLRLVFATTEDIHSTFLTTFLRRIPILVSLPDLQQRSREEKEALTLQFFWQEARTLAARLQLTPRLLQVLTQYVYRGNVGELKNVVKYAVASAWARSPGSEMLTVTLHDLPENIMAATPALSEAMGQKEPLLIEPQTSLVWLLRARDPVQGLIHDVQCRILALYEAVLNKKTVWEEAQRSMGEEIETLFDRLIFDNQDASSSQMLLLIAHQVREEYYRLEKRFNIQFNGNCLYALSHYLIHRSRQAASTMSNEKIRLLADFLANKFPLLYRFCEAILDALALKLDIEPRRIDLLLLVLWFQKNGAISQQQVTRAIILAHGYATASSIASVANRLLKSPLFESFDMPLDVTPEAIANQVMAYIERHALASGLIILVDMGSLNAIHSHFNRRLNTPVAIINNVSTGMAMYVGERILHGDMLEDIVREIGDDLAVEHQLYYPQTDKPRAILTTCATGLGAAANLSALLKASIPEALGVDIVACDVETLADPARREPMLSRYDVLAIVGTLDPHLADLPWISLDSLISGEGSRPLMRIFGELATAEQVSEINNLILKNFSLRRVIESVTILDTAKVINQVEQFLLRYEHLAGYEVPNERKVALYVHISCLIERLIRHASPTHYAGRQCPERELATLREAFSVIESGYSVKIPAVELYYIHDILTRETEFIQEDQEF
>CP030171.1|AWX89490.1|4873483_4874500_-|Ldh-family-oxidoreductase
MGSVTLSLPEAYDLALAVLSANGFSADHAAAIARNVAAGERDGCASHGLWRLLGIVDTLRKGKVSPDAEPQIHDQAPAIVRADAGGAFSLLAYERALPLLLEKARHSGIAALAINRCVHFSALFADIEPLTEAGLVGLACTPSHAWVAPAGGTRPLFGTNPIAFGWPRREEPPFIVDMATSAAARGEIQLHQRAGKALPEGWGIDSQGQPTTDATEVLNGAMLTFGGHKGSALAAMVELLAGPLIGDMTSAESLAWDNGAGGLPYGGELILALDPQRFLGAQAQEQLARAETLFNAMQDQGARLPGERRFACRQQSERQGVAISHSLHDEICALRQGG
>CP030171.1|AWX89491.1|4874511_4876113_-|APC-family-permease
MTIHTTHNSQTRVAESGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVASIAGPAGIASWVIGGFAVLLLGIVYCELGAALPRAGGIIRYPVFSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPALTQPGSSSPTLLGWGGQFLLLCFFFALNYYSVKTFARSNNFISVLKFLVPLLVVVTLFAFFKPENLHAQGIAPFGMSGVEAAISAGGIIFAYLGLTPIISVASEVQKPQRTIPIALILSVVLSTIIYVLLQLAFLGSIPTEMLNGGWAEVSKQFSLPYRDIAITLGMGWLAFMVISDAIISPSGTGNIYMNATPRVIYGWAKAGTFFKAFTHIDKASGIPRPALWLTFGLSIFWTLPFPSWEQLISVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFRVRAFGIIGPVSFMVSALIVYWSGWNTLSWLLGLQIVMFVVYVMCKGKVPEHTVSLAQQVKSSLWLIAFYALIILFSWLGSFGGLNVIGHPWDTVLVAAMSLGIYYWGARSCLPQANFSGDEEE
>CP030171.1|AWX89492.1|4876128_4877733_-|aldehyde-dehydrogenase-(NADP(+))
MNASQTTAGRQFIAGRRVASGEATLLSLRAVDGEATGHLFYPASREEAAQAAEAAQQAFAIYSQTAPQQRAHFLCAIADELDALGEAFFAIAEQETALPLARLQGERARTSGQLRMLAGVILRGDTFAARIDTALADRQPLPRPDLRQYQQALGPVAVFGASNFPLAFSTAGGDTASALAAGCPVVVKAHEGHMATAELTADAIVRAVARCGLPGGVFNMIFGTDIGAELVRHPAIQAVGFTGSLAGGKALYQLAQQRPQPIPLFAEMSAINPLIILPQALQTRAEALANELVASFTLGGGQFCTRPGLILALRGAGLERFKSALCAAVAGCAPQVLLNAPTLQHYRQGVAALAAHPRIERLASGLAAGAGEAQTQLWQAQVEDLLAQDTLLQTEVFGPLSLLVEVDDAAQLQAVVKALQGQLTATLHAEADDGPLAASLLPLLCEKAGRVLFNGYPTGVEVCDAMVHGGPWPATTDARGTSVGSRAIERFLRPVCLQNAPAALLPPALQDANPLNLLRLVNGQWTREAISSSH
>CP030171.1|AWX89493.1|4877747_4878668_-|dihydrodipicolinate-synthase-family-protein
MSNKAIHWSGVFPAVSTQFRSDYSLDLDATHAVMKNLVKDGVSGLVVCGSVGENTSLSTDEKLQIIEVAKDAAGGKIPVIAGVAEFTTAFAQKMAKEAERVGVDGIMVMPALVYSSKPHETAAHFRSVATATDLPIMVYNNPPIYKNDVTPDILATLTDCDNIVCFKDSSGDTRRFIDLRNTVGDRFVLFAGLDDVVVESIAVGAEGWISGMSNAFPREGETLFRLARQQRYEEAMALYRWFMPLLHLDARPDLVQCIKLCEELLGRGSAVTRPPRLALEGETRQQVVAIVEQALATRPALPDVGL
>CP030171.1|AWX89494.1|4878819_4879644_-|AraC-family-transcriptional-regulator
MIGVSEAAPPRAVNQPELAVDELSQICEGLARQRPENMAALLNALALIAPLLNAIPNVVFFIKDSEARYLLANLTLARRCGFKTVSSLLGKTSADVFPSALGQGYTEQDLRVLREGVTLRDQLEMHLYNGRERGWCLTQKLALRDVRGQVIGMAGISHDLQEAHARHPAWQRLAIVDDHIRRHYHRPIAMEELTALSGMSIAQIERYCKRIFHLTPRQMIHKVRLEKATELLAGDTPITDIALQCGYTDHSAFSRQFKAMTGSTPRDFRLTLQG
>CP030171.1|AWX89495.1|4879954_4880902_+|4-hydroxyproline-epimerase
MTAPRPPIALRAIDSHTGGEPTRLIVDGFPDLGGGSMAERRDRFARDFDRWRQAVILEPRGSDVLVGALLCKPVSAAATAGVIFFNNAGFLNMCGHGTIGLIASLAWLGRILPGVHLIETPVGDVSATLHDDGSVSVQNVPARRWKKQVRVETARGPVIGDIAWGGNWFFLINDHPFAITPAHIPQLTDYAWAVREGLEAAGIRGDDGGVIDHIELFADDDAADSRSFVLCPGKAWDRSPCGTGTSAKLACLAQDGKLQPGAIWRQASIIGSQFTASYQRAAAGIIPTIRGEAWVCGDNQLILNPDDPFCWGIAP
>CP030171.1|AWX89496.1|4880898_4882008_+|D-amino-acid-oxidase
MKPCDVIVIGAGIIGAACAWQLAKRGQKVTLIDDGQPGATAAGMGHLVCMDDDPAELALSAWSLARWRAITPRMPATCAWRGCGTLWLAESEEEMAVAGEKQRRLAGYQVHSELQTPQQIAGREPLLRSGLAGGLWVPGDSIVYAPNVARWLMADAGDHLTCLHDSAQAITEPEVLLASGKWLQARAIVVACGLEANTLLAENWLRPRKGQLAITDRYGPRVHHQLVELGYGASAHGGGTSVAFNLQPRPTGQLLIGSSRQFDNRERQLDLPLLGQMLDRARHFVPALATLNIIRCWSGLRAASQDGNPLIGPHPTRRGVWLALGHEGLGVTTAPATAELLAAQILGERCPLAPEAWLPARLYHQEAIA
>CP030171.1|AWX89497.1|4882004_4882268_+|(2Fe-2S)-binding-protein
MNSTLNITVDGEALTVPEGISVAAALALTGDPTTRQAVNGDPRAPFCGMGVCQECRITVDGRRVLACQTLCRAGMQIERSRYVHAAL
>CP030171.1|AWX89498.1|4882248_4883511_+|FAD/NAD(P)-binding-oxidoreductase
MYTLRCDILILGAGPAGMAAALAAAACDKQVIILDDNPAPGGQIWRAGPQATLPALARRYRDAIAASAAIRVVNGARLIARPSARSVLFETADGGGVVYWQKLILCCGARELSLPFPGWTLPGVTGAGGLQAQIKHGLSLKGEKVVIAGSGPLLLAVADTVNKAGGQVTNIVEQAPLPALLRFASGLWRWPQKLRQLATLAPKGYLSGAQAIRAHGATRLEAVTLRQRGVERTVACDRLAIGYGLVPNIETGLLFGCATAQEAIQVNRWQQTSLADIYAAGECTGFGGSELALAEGEIAGYAAVGASQQAQALFARRARWQRFATAINRTFRLAESLKNAATPESLLCSCEDVRCGDVAAADDWLQAKLTQRCGMGACQGRTCAASARWLYGWPLPQPREPLSPARAETLIALARLSAEP
>CP030171.1|AWX89499.1|4883514_4883955_-|homoprotocatechuate-degradation-operon-regulator-HpaR
MHDSLTIALLQAREAAMAYFRPIVKRHNLTEQQWRIVRILAERPSMDFHDLAFRACILRPSLTGILTRMERDGLVLRLKPVNDQRKLYVSLTPAGTALYESAQAEVEETYRLLEAQFTTEKLQQLTSLLEEFIALGVPAGRGDEEE

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Crispr_ID: CP030171_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030171_4

5158162-5158271

Orphan

Consensus_repeat	Method
CAGCGCAAGCCGGGGAATTTCCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030171_4

>merge|CP030171|4|5158162-5158271|CRISPRCasFinder
CAGCGCAAGCCGGGGAATTTCCCGGGTCGCGGCGTTCCGCCTTACCCGGGCTACCGGACAGTGTAAACAGTAGCCCGGCTAAGCGCAGCGCAAGCCGGGGAGTTTCCCGG

>CP030171|4|4|5158162-5158271|CRISPRCasFinder
CAGCGCAAGCCGGGGAATTTCCCGG	GTCGCGGCGTTCCGCCTTACCCGGGCTACCGGACAGTGTAAACAGTAGCCCGGCTAAGCG
CAGCGCAAGCCGGGGAGTTTCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
CP030171.1\|AWX89726.1\|5148090_5150559_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|236644
CP030171.1\|AWX89732.1\|5157154_5157460_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
CP030171.1\|AWX89731.1\|5156237_5157155_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
CP030171.1\|AWX89733.1\|5158294_5158666_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|119304
CP030171.1\|AWX89740.1\|5166605_5167040_+\|VOC-family-metalloprotein-YjdN	unknown	unknown	gnl\|CDD\|236656
CP030171.1\|AWX89739.1\|5166042_5166378_+\|phnA-family-protein	unknown	unknown	gnl\|CDD\|182315
CP030171.1\|AWX90315.1\|5167195_5167921_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|182227
CP030171.1\|AWX90313.1\|5146911_5147478_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
CP030171.1\|AWX89741.1\|5167921_5168374_+\|phosphonate-C-P-lyase-system-protein-PhnG	unknown	unknown	gnl\|CDD\|226151
CP030171.1\|AWX89729.1\|5154397_5155183_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|239321
CP030171.1\|AWX89730.1\|5155408_5156092_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|163429
CP030171.1\|AWX89725.1\|5146309_5146600_-\|PerC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|310570
CP030171.1\|AWX89738.1\|5163995_5165498_-\|proline/glycine-betaine-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
CP030171.1\|AWX89727.1\|5152575_5153907_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
CP030171.1\|AWX89736.1\|5161415_5162768_-\|alpha-glucosidase/alpha-galactosidase	unknown	unknown	gnl\|CDD\|185035
CP030171.1\|AWX89734.1\|5158675_5159632_-\|recombinase	unknown	unknown	gnl\|CDD\|310773
CP030171.1\|AWX90314.1\|5150567_5152583_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|184754
CP030171.1\|AWX89735.1\|5159906_5161322_-\|melibiose:sodium-transporter-MelB	unknown	unknown	gnl\|CDD\|182453
CP030171.1\|AWX89728.1\|5153903_5154350_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	unknown	unknown	gnl\|CDD\|184756
CP030171.1\|AWX89737.1\|5163007_5163946_+\|transcriptional-regulator-MelR	unknown	unknown	gnl\|CDD\|182416

Protein	Function_ID	Function_description	E-value
CP030171.1\|AWX89726.1\|5148090_5150559_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|236644	PRK10049, pgaA, outer membrane protein PgaA; Provisional.	0
CP030171.1\|AWX89732.1\|5157154_5157460_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	1.05092e-57
CP030171.1\|AWX89731.1\|5156237_5157155_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
CP030171.1\|AWX89733.1\|5158294_5158666_-\|plasmid-stabilization-protein	gnl\|CDD\|119304	pfam10784, Plasmid_stab_B, Plasmid stability protein. This family is conserved in the Enterobacteriales. It is a putative plasmid stability protein in that it is expressed from the operon involved in stability, but its actual function has not yet been characterized.	6.75963e-11
CP030171.1\|AWX89740.1\|5166605_5167040_+\|VOC-family-metalloprotein-YjdN	gnl\|CDD\|236656	PRK10148, PRK10148, VOC family metalloprotein YjdN.	2.08906e-93
CP030171.1\|AWX89739.1\|5166042_5166378_+\|phnA-family-protein	gnl\|CDD\|182315	PRK10220, PRK10220, phnA family protein.	5.50786e-75
CP030171.1\|AWX90315.1\|5167195_5167921_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|182227	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional.	1.31998e-165
CP030171.1\|AWX90313.1\|5146911_5147478_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	1.437e-05
CP030171.1\|AWX89741.1\|5167921_5168374_+\|phosphonate-C-P-lyase-system-protein-PhnG	gnl\|CDD\|226151	COG3624, PhnG, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism].	3.75878e-65
CP030171.1\|AWX89729.1\|5154397_5155183_-\|DsbA-family-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	3.12435e-49
CP030171.1\|AWX89730.1\|5155408_5156092_+\|TerC-family-protein	gnl\|CDD\|163429	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.	3.64201e-68
CP030171.1\|AWX89725.1\|5146309_5146600_-\|PerC-family-transcriptional-regulator	gnl\|CDD\|310570	pfam06069, PerC, PerC transcriptional activator. PerC is a transcriptional activator of EaeA/BfpA expression in enteropathogenic bacteria.	3.15397e-22
CP030171.1\|AWX89738.1\|5163995_5165498_-\|proline/glycine-betaine-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
CP030171.1\|AWX89727.1\|5152575_5153907_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
CP030171.1\|AWX89736.1\|5161415_5162768_-\|alpha-glucosidase/alpha-galactosidase	gnl\|CDD\|185035	PRK15076, PRK15076, alpha-galactosidase; Provisional.	0
CP030171.1\|AWX89734.1\|5158675_5159632_-\|recombinase	gnl\|CDD\|310773	pfam06406, StbA, StbA protein. This family consists of several bacterial StbA plasmid stability proteins.	2.77267e-143
CP030171.1\|AWX90314.1\|5150567_5152583_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|184754	PRK14582, pgaB, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB.	0
CP030171.1\|AWX89735.1\|5159906_5161322_-\|melibiose:sodium-transporter-MelB	gnl\|CDD\|182453	PRK10429, PRK10429, melibiose:sodium transporter MelB.	0
CP030171.1\|AWX89728.1\|5153903_5154350_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	gnl\|CDD\|184756	PRK14584, hmsS, hemin storage system protein; Provisional.	2.89489e-71
CP030171.1\|AWX89737.1\|5163007_5163946_+\|transcriptional-regulator-MelR	gnl\|CDD\|182416	PRK10371, PRK10371, transcriptional regulator MelR.	0

>CP030171.1|AWX89732.1|5157154_5157460_+|chaperone-modulator-CbpM
MATVTVTFTITELCLRTGVSEEELTEIVGLGMIEPHQPQADAWLFDDSAVTIVHRAVRLRNELELDWPGIAVALTLLDENARLTRENRLLQQRLARFLAHG
>CP030171.1|AWX89731.1|5156237_5157155_+|curved-DNA-binding-protein
MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQQQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHASRGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVADGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLATAEASFDPRKTWGKA
>CP030171.1|AWX89730.1|5155408_5156092_+|TerC-family-protein
MYAFLQQWDMAVIMLQIVAIDLLLGGDNAVVIAMACRKLPPQKRTKAIVIGTVGAILARILLLAIALYLLSLPWLKIVGALLLMWIGIRLVSNEEDESEVASSGSLWRTAVTITVADVIMSLDNVLAVAAAGKGHIALVALGVAISIPVIVAGSKLVLALLTRFPAVVLLGGMLIGWIAGSMLVSDPTLRQLFPTAGDGIARLAGAIGALLVLFAGWRRRPRPQVKD
>CP030171.1|AWX89729.1|5154397_5155183_-|DsbA-family-protein
MSGHKKYLSVALLSAVLLPAMASAADAPATFTAEQEAQIGKIAADYLVAHPEVLLQASQKLQQIQAEQQASAATQAVLKNAALLTQDKNTPTYGPANGKVTVIEFFDYQCVYCSRLAPVMEQVIKAHPQTRFAFKEWPIFGGRWESSLEAAKTGLQIYQQKGADAYLAYHNGIYATGHNEGKLTTADIQQQAKKAGFDAKKATDVEPVLQSINDLAQEIGLSGTPGVIVMPTTGDTEASITVFPGLADKASLEAAIKKAGG
>CP030171.1|AWX89728.1|5153903_5154350_+|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD
MNENTLILTEHRVLPRLVDAGLTLLAWLGFLFFLYANLLMQFIAPPSPRWSSLMDSLNTALVYLLIAALNGWLLILWYHYNRRRVHTRRHTAVLTLRDEELASSFNVAPQIISEMSRYNLLTVYHDHIGQIIDLKSHALPPPEERDQE
>CP030171.1|AWX89727.1|5152575_5153907_+|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MTDRIIALCILCLVFGLPLGVAAAFTGELILDFVFFWPLFMSVLWITGGLYFWFQLERHWPWGEDTPPPSLPGNPLISILIPCFNEEKNARETISAALAQRYANLEVIAINDGSSDNTAQVLQQLAQEEPRLRVIHLAANQGKAVALKAGAAAARGDLLVCIDGDALLDRDTAAWLVAPLIHYPHVGAVTGNPRIRTRSTLIGRIQVGEFSSIIGLIKRTQRIYGRVFTVSGVIAAFRRQALADVGYWSPDMITEDIDISWKLQLRHWDIFFEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLVNLRRLFHWQHHRMWPLFLEYACSTLWAFAYAVTILLFILSRLMPLPDNLTVHSLFPPEFTGMLLGLMCLLQFVASLYIERRYEKKVAKSLFWVIWFPMVYWMIGLLTTLVAFPKVMLKRQRSRARWVSPDRGKGSLR
>CP030171.1|AWX90314.1|5150567_5152583_+|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MLNTTLRNGLMLLGWLCLIFSVRAEEVPFLAPQQRPQLEANNPWPADRFLVLAYHDVEDDAADQRYLSVRTSALNEQIAWLLHHGYHAVSVQDILDAHHGLKPLPPKAFLLSFDDGYSSFYTRVWPLLKAWNVPALWAPVGSWVDTPANQPVNFGGLMTPRDRFATWEMVRELSRSPLVEIGAHTWASHYGLPANPQGSREPAAANRGWDKTTGRYESDAQFTRRMADDVQKVTAKIHDVAGKAPRAWVWPYGAASGSTLAIAKQQGYQLAFTLNDGLGNVKDLDNIPRMLIAGNPSIKAFANAVTQIQEADPVRVMHVDLDYVYDPNPVQQAKNIDKLVQRVYDMKISHVFLQAFSDPQGDGTVKSLYFPNRWLPMRADLFNFVSWQLQTRGGVKVYAWMPVLAFDLSSDLPRVQRWDPQTGKALLARQPYVRLSPWDPRVRQQITGIYEDLARHASFSGILFHDDAVLTDFEDVSPEAVAAWRQSGLAHDAGPVPQSPQERQAWMRFKSQTLTRFTLQLRQSVQAIRGPQVKTARNLFALPILEPQSEAWFAQNLDDFLAAYDWTVPMAMPLMESVPIDASQAWLTRLVQAVARRPGALKKTIFELQARDWNRRQHNAIPDQQLADWMHLLRLNGVKNYGYYPDDFINNQPDISRIRPQFSSWWYPDHD
>CP030171.1|AWX89726.1|5148090_5150559_+|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MNIWQIEMERSPYSNTLLFNRNTKLSLSIGVLLLFPTLVQGADSLYDQQILQARQGQYAPFLSYLQQYQLRHALTPSQVADWLQVALWAGQDDEVVKVWRRYQVYMPLPARGTAAAAQAMRNQKQWQASLLLWQQALSQAPDSDDYRIGYIKTLADARKDGEALSEARRLVAEQASIAHLQTLSYVYLRLGKSWDQLLVDTQILDREPQNKAALASLMATLTRNRIDSPALGLANNVELTPAEKRNLQLNAAAELVRLADTPSREEKARYALARTALAQYDAMIAAWRPDPQAAPDISRARIDRLGALYANADYAQVIREYQSLMAQQQAVPDWAIGWVISSYIALKQIEPALALIHQHPSWLTSQQNEEHELFYALLDTAQYPAAQRYVARLTRNAPYIRHLYGSPTPQPNDDWLTAQSLNVHYLSATNALPQAEARMQRLAATAPGNQGLQIDYAALLQDRGLPRAAERQLKAAEALEPASLQLERQQAWVALDLQEWRQMDLLTDDVIARSPRDLNTQRLARARDIHHFSELRLSVGKGLHSDNPVSGTHDLSFEMAIYSPPIADSWRLFGGHRFAQGNFEEGKGSRRQLFAGIEWRPRDAWGELELSSVNFHGENKPGVRLSAAHDVNDRWQLGGELERISQQTPLRALRNGVSANRGEGWLRWYQNERREYRVSAAASRFTDHNRRQEYTLSGKERLWQTPWLTLDLQPGLSASANSRTDTAYYSPARDLAATAALAVDHTLYQRYDTVWSQQLLAGGGSYWQKNHAAGAITTLGYGQRLRWNNLVDAGVMLNWDKRPYDGKRENNLAITVDANIRF
>CP030171.1|AWX90313.1|5146911_5147478_-|LuxR-family-transcriptional-regulator
MILVTQDHYLFQGVKNFFPDIIQLDSSGKAILDNEVDELSLLVDSRSPLCHYDYLVMEAAQSRKRICCIVLDMRHREEHLLSLKSFLNMSLSPADMATLFGLFLEMKSKRLTKEWFDNLRLSMTEQLMLRFLEAGMTMEEVAVNLNTSLKSLYRKRTALYERLGLDNFNEACLFIFKNKLLDQSGRSP
>CP030171.1|AWX89725.1|5146309_5146600_-|PerC-family-transcriptional-regulator
MRIRDSIAERLEACGLYRRAASRWIEVMQRCLDDEDREWIRHHRNQCLKKAQRPPAPKEEFADLHQAAKETQYRMGIAKPYGEAFRLPGKGKTAAE
>CP030171.1|AWX89733.1|5158294_5158666_-|plasmid-stabilization-protein
MTLERRKVLIYLRPDISASERFADAKIEAHHRGDRGDMSRTALLAGLALGEVDSRLPSMLAALLAEDTKPETLRKMLASFLEIQPASSAPAAAPAAAPAKTPEPPAPVSESVSARNLAGSLPD
>CP030171.1|AWX89734.1|5158675_5159632_-|recombinase
MRIFIDDGSTNIKMLWEQDGETFTHISPNSFKRGWSATFGSGKPFNYTVDDEKYSFDLITPDALPTNNIDWQYSPLNSIAVHHALLTSGLEPQDVEIVVTLPLTEFYDEDAQYRLDNIERKKKSLLREVKLNKGVVFNITKVTVRPESIPAGISLCDELKPSHSVLIIDLGGTTLDISMVAGQMTSVSRIYGDPKLGVSLVTDAVKLALARANTDTSSYNVDQIIINRHDEAYLTDNINDPDAVSEVKKVITNSIERLTTRVLTAIDSFKGYSHAIVIGGGAPLVADAIRERMGLREDRFVVAEEPQFALVRGLKIIG
>CP030171.1|AWX89735.1|5159906_5161322_-|melibiose:sodium-transporter-MelB
MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNCTRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMDVPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVSAVGGADRGFGFQMFTLVLIAFFVVSTLVTLRNVHEVYSSDSGVSEDASHLSLRQMVALIYKNDQLACLLGMALAYNTAANIIAGFAIYYFTYVIGSAEMFPYYMSYAGAANLLTLVLFPRLVKGLSRRILWAGASIMPVLGCGVLLLMALSGVYNVALISLAGVLLNIGTALFWVLQVIMVADTVDYGEYTMNIRCESIAYSVQTLVVKAGSAFAAWFIAIVLGIIGYVPNVAQSSQTLLGMQAIMIALPTLFFALTLFLYFRYYKLNGDMLRRIQIHLLDKYRRVPENVAEPERPIVVPNQV
>CP030171.1|AWX89736.1|5161415_5162768_-|alpha-glucosidase/alpha-galactosidase
MTAPKITFIGAGSTVFVKNILGDVFQRPALKSAHVALMDIDDTRLEESHTVVRKLMDSVGAKGEISCHRDRKTALQGADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWAICDDMTEVCPDATLLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLDLNPADLRYRCAGINHMAFYLSLEKKLADGSYVSLYPDLLQAYADGRAPKPNLHGNPRCENIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGREDLIARYKVPLDEYPKRCVEQLANWHQELESYQRGERIEVKPSREYASTIMNAIWTGEPSVVYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGALPAHLAALMQTNINVQTLLTEAILTENRDYVYYATMMDPHTAAVLGIEEIYALVDDLIASHGDWLPSWLHR
>CP030171.1|AWX89737.1|5163007_5163946_+|transcriptional-regulator-MelR
MEYRFTSLPPDPFMCSSDEKQSRSPLALYSEYQRMDIELRPPHAMPTSHWHGQVEVNVPFDGDVEYLINNEVVRIEKGYITLFWACTPHQLTRPGDCQQMAIFNLPMHLFLSWPLDRELINHVTHGMVIKSLAAQQLSAFEVRRWQQELNHDNEQIRQLAIDEIALMLKRLSLAGWQPILVNKTSRTHKNSVSRHAQFYVSQMLEFIAAHYDQALTVNAVAEHVKLNPNYAMGVFQRVMQQTMKQYITAMRINHVRALLSDTDKTILDIALTAGFRSSSRFYSTFTRYVGMPPQQYRKLSQQRRHGLALPEA
>CP030171.1|AWX89738.1|5163995_5165498_-|proline/glycine-betaine-transporter-ProP
MLKRKKIKPITLKDVTIIDDGKLKKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPDANPSVQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISSVVGEQNFLEWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVDTMEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMVGMLFVQPVIGMLSDRFGRRPFILIGSVALFALSIPAFIMINSNVTSLIFAGLLLLAVVLNCFIGVMASSLPAMFPTHIRFSALASAFNISVLIAGLTPTLAAWLVETTQNLMMPAYYLMVIAVVGMATGLSMKETANRPLKGATPAASDIQEAKEILGEHYDNIEQKIEDIDQEIADLQAKRSRLVQQHPRIND
>CP030171.1|AWX89739.1|5166042_5166378_+|phnA-family-protein
MQLPHCPKCDSTYTYEDNGMYICPECAHEWNPAEATEENDVLIVKDANGNLLADGDSVTVVKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
>CP030171.1|AWX89740.1|5166605_5167040_+|VOC-family-metalloprotein-YjdN
MSLSPYLAFAGNCAEAIAFYQQTLGAELMFKMTFGEMPPSAQEASDGCPSGQKMADDAIAHASLRIGNGELMLSDSAFGPDVHYAGFTLVLDPNDVAEGQRWFDALAVGGRIEMAWQETFWAHGFGKVVDRFGVPWMINVVKQG
>CP030171.1|AWX90315.1|5167195_5167921_+|phosphonate-metabolism-transcriptional-regulator-PhnF
MHLSRHPTSYPTRYQEIAARLEQELRHHYRCGDYLPAEQQLATRFDVNRHTLRRAIDQLVERGWVQRRQGVGVLVLMRPIDYPLNAQARFSQNLLEQGSDPTSEKLLSVLRPASAHVAEAFGISEGENVIHLRTLRRVNGVALCLIDHYFADLRFWPVLQTFSHGSLHNLLRDRLDVELTRVRTKISARRAQAKESKLLEIPNMAPLLCVRTLNSRQGEQAVTEYSVSLTRADMIEFTMEH
>CP030171.1|AWX89741.1|5167921_5168374_+|phosphonate-C-P-lyase-system-protein-PhnG
MHFDTATRQRWMSVLAHSEPQDLLARMHALQLAPEYELIRSPETGLVQLQARMGGIGDRFFAGDATLTRAAVRLADGTLGYSWILGRDRPHAERCAAIDALLQSPRHFHNLMETLITPLEALRSARIEARRAEVNASRVDFFTLVRGDNA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030171_1	1.1\|4234872\|42\|CP030171\|CRISPRCasFinder	4234872-4234913	42	MK448233	Klebsiella phage ST11-VIM1phi8.1, complete genome	8452-8493	1	0.976
CP030171_1	1.1\|4234872\|42\|CP030171\|CRISPRCasFinder	4234872-4234913	42	MK448235	Klebsiella phage ST512-KPC3phi13.1, complete genome	8452-8493	1	0.976
CP030171_1	1.1\|4234872\|42\|CP030171\|CRISPRCasFinder	4234872-4234913	42	MK448231	Klebsiella phage ST101-KPC2phi6.1, complete genome	11388-11429	1	0.976
CP030171_1	1.1\|4234872\|42\|CP030171\|CRISPRCasFinder	4234872-4234913	42	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	8607-8648	2	0.952
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	604956-604985	6	0.8
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP021468	Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-1	218576-218605	8	0.733
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP011248	Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence	179086-179115	8	0.733
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP048816	Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed	64280-64309	8	0.733
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	178847-178876	8	0.733
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	178931-178960	8	0.733
CP030171_3	3.1\|4873378\|35\|CP030171\|CRISPRCasFinder	4873378-4873412	35	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	406265-406299	8	0.771
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_CP017944	Phyllobacterium zundukense strain Tri-48 plasmid unnamed4, complete sequence	97164-97193	9	0.7
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	NZ_LR723673	Rhizobium flavum strain YW14 plasmid 4	86785-86814	9	0.7
CP030171_2	2.1\|4472957\|30\|CP030171\|CRISPRCasFinder	4472957-4472986	30	CP000618	Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence	60928-60957	9	0.7

1. spacer 1.1|4234872|42|CP030171|CRISPRCasFinder matches to MK448233 (Klebsiella phage ST11-VIM1phi8.1, complete genome) position: , mismatch: 1, identity: 0.976

tgttggcacaacctcaccggtacgcagcgtggttactgggtt	CRISPR spacer
tgttggcacaacctcgccggtacgcagcgtggttactgggtt	Protospacer
***************.**************************

2. spacer 1.1|4234872|42|CP030171|CRISPRCasFinder matches to MK448235 (Klebsiella phage ST512-KPC3phi13.1, complete genome) position: , mismatch: 1, identity: 0.976

tgttggcacaacctcaccggtacgcagcgtggttactgggtt	CRISPR spacer
tgttggcacaacctcgccggtacgcagcgtggttactgggtt	Protospacer
***************.**************************

3. spacer 1.1|4234872|42|CP030171|CRISPRCasFinder matches to MK448231 (Klebsiella phage ST101-KPC2phi6.1, complete genome) position: , mismatch: 1, identity: 0.976

tgttggcacaacctcaccggtacgcagcgtggttactgggtt	CRISPR spacer
tgttggcacaacctcgccggtacgcagcgtggttactgggtt	Protospacer
***************.**************************

4. spacer 1.1|4234872|42|CP030171|CRISPRCasFinder matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 2, identity: 0.952

tgttggcacaacctcaccggtacgcagcgtggttactgggtt	CRISPR spacer
tgttggcacaacctcacttgtacgcagcgtggttactgggtt	Protospacer
*****************. ***********************

5. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 6, identity: 0.8

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
acagccgcggctgccgtgatcggcaacatc	Protospacer
. .**** ** ******************.

6. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP021468 (Komagataeibacter europaeus strain SRCM101446 plasmid pKE1446-1) position: , mismatch: 8, identity: 0.733

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
accgcccaggctgccgtgatcggcaatagc	Protospacer
.  *** *** ***************.* .

7. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 8, identity: 0.733

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
tgcaacatgggcgccgtgatcggcaacatc	Protospacer
 * . *. ***.*****************.

8. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP048816 (Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed) position: , mismatch: 8, identity: 0.733

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
cgttccgaggatgccgtgatcggcatggat	Protospacer
 *  ******.**************  . *

9. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 8, identity: 0.733

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
tgcaacatgggcgccgtgatcggcaacatc	Protospacer
 * . *. ***.*****************.

10. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 8, identity: 0.733

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
tgcaacatgggcgccgtgatcggcaacatc	Protospacer
 * . *. ***.*****************.

11. spacer 3.1|4873378|35|CP030171|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 8, identity: 0.771

tgacggcgctccgcgccttacccgggctacacaac	CRISPR spacer
tagcggcgctgcgcgccttatccgggctacgatcc	Protospacer
*..******* *********.*********.   *

12. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_CP017944 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
cttgccgatggtgccgtgatcggcgatcga	Protospacer
   ***** ***************.*.

13. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to NZ_LR723673 (Rhizobium flavum strain YW14 plasmid 4) position: , mismatch: 9, identity: 0.7

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
atctacgagggcgcggtgatcggcaacagc	Protospacer
.    ******.** ************* .

14. spacer 2.1|4472957|30|CP030171|CRISPRCasFinder matches to CP000618 (Burkholderia vietnamiensis G4 plasmid pBVIE02, complete sequence) position: , mismatch: 9, identity: 0.7

ggggccgagggtgccgtgatcggcaacatt	CRISPR spacer
atcaccgcgggtgccgcgatcggcaaccgg	Protospacer
.  .*** ********.**********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1236951 : 1298678

Escherichia_phage(27.66%)

portal,capsid,plate,holin,integrase,lysis,tRNA,terminase,tail,head

attL 1265867:1265882|attR 1283063:1283078

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX86251.1\|1236951_1237719_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AWX86252.1\|1237758_1238106_+	50S ribosomal protein L19	NA	NA	NA	NA
AWX86253.1\|1238265_1238484_-	DNA-binding transcriptional regulator	Q37973	Salmonella_virus	7.8e-33	84.7
AWX86254.1\|1238565_1239726_-	phage late control D family protein	Q7Y4C6	Escherichia_virus	5.2e-176	81.5
AWX86255.1\|1239725_1240205_-\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	4.8e-67	78.3
AWX86256.1\|1240218_1242660_-\|tail	phage tail tape measure protein	Q7Y4C8	Escherichia_virus	1.0e-290	71.8
AWX86257.1\|1242652_1242790_-\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.2e-17	91.1
AWX86258.1\|1242804_1243080_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.4e-31	77.3
AWX86259.1\|1243140_1243656_-\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	3.2e-69	75.6
AWX86260.1\|1243669_1244851_-\|tail	phage tail protein	A0A0F7LBW9	Escherichia_phage	7.9e-196	86.6
AWX86261.1\|1244960_1246121_-\|tail	phage tail protein	S4TP62	Salmonella_phage	5.1e-46	50.7
AWX86262.1\|1246200_1246467_-	hypothetical protein	A0A2H5BN44	Klebsiella_phage	6.2e-32	81.8
AWX86263.1\|1246468_1248526_-	hypothetical protein	A0A2H5BN52	Klebsiella_phage	2.6e-311	90.0
AWX86264.1\|1248530_1249127_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	4.7e-48	53.5
AWX86265.1\|1249119_1250028_-\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	2.6e-114	71.5
AWX86266.1\|1250032_1250380_-\|plate	baseplate assembly protein	Q7Y4D7	Escherichia_virus	4.9e-45	77.4
AWX86267.1\|1250376_1251012_-\|plate	phage baseplate assembly protein V	M1SV78	Escherichia_phage	6.9e-98	83.9
AWX86268.1\|1251080_1251530_-	phage virion morphogenesis protein	O80313	Escherichia_phage	4.2e-49	68.0
AWX86269.1\|1251522_1251990_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	8.2e-64	74.8
AWX86270.1\|1252085_1252517_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	1.5e-40	64.7
AWX86271.1\|1252513_1253011_-	lysozyme	A0A0F7LBS0	Escherichia_phage	1.3e-80	86.7
AWX86272.1\|1252997_1253288_-\|holin	holin	A0A0M5M1H1	Salmonella_phage	5.0e-35	79.6
AWX86273.1\|1253292_1253496_-\|tail	phage tail protein	S4TTA0	Salmonella_phage	9.5e-25	79.1
AWX86274.1\|1253495_1254002_-\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	5.4e-61	84.3
AWX86275.1\|1254098_1254842_-\|terminase	terminase	Q94MJ2	Enterobacteria_phage	2.5e-99	79.5
AWX86276.1\|1254845_1255904_-\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	4.9e-165	83.8
AWX86277.1\|1255977_1256832_-\|capsid	capsid scaffolding protein	Q94MB7	Escherichia_virus	1.3e-126	81.3
AWX86278.1\|1256997_1258767_+	oxidoreductase	A0A0F7LCK3	Escherichia_phage	2.8e-306	87.9
AWX86279.1\|1258766_1259810_+\|portal	phage portal protein	M1SV64	Escherichia_phage	6.8e-167	82.4
AWX86280.1\|1260325_1260520_-	hypothetical protein	S4TRZ0	Salmonella_phage	5.1e-12	64.1
AWX86281.1\|1260518_1260950_+	hypothetical protein	S4TUD6	Salmonella_phage	3.0e-68	89.5
AWX86282.1\|1261022_1261253_-	DinI family protein	A0A218M4I0	Erwinia_phage	2.7e-28	77.6
AWX86283.1\|1261256_1261442_-	hypothetical protein	A0A0M5M1G5	Salmonella_phage	6.0e-18	77.0
AWX86284.1\|1261563_1263789_-	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	91.0
AWX86285.1\|1263781_1264063_-	hypothetical protein	A0A218M4I8	Erwinia_phage	1.4e-42	90.3
AWX86286.1\|1264059_1264356_-	DUF3850 domain-containing protein	A0A2D1GP44	Escherichia_phage	3.0e-11	45.5
AWX86287.1\|1264356_1264578_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	5.3e-29	86.3
AWX86288.1\|1264577_1264811_-	DUF2732 domain-containing protein	Q6K1F6	Salmonella_virus	6.0e-23	76.6
AWX86289.1\|1264874_1265162_-	hypothetical protein	F1BUS4	Erwinia_phage	1.3e-24	57.0
AWX90110.1\|1265242_1265443_-	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	1.9e-17	82.0
AWX86290.1\|1265450_1265960_-	hypothetical protein	Q6K1F8	Salmonella_virus	9.2e-85	93.5
1265867:1265882	attL	NA	NA	NA	NA
AWX86291.1\|1265991_1266219_-	hypothetical protein	NA	NA	NA	NA
AWX86292.1\|1266343_1267201_+	phage repressor protein CI	Q6K1G0	Salmonella_virus	4.0e-88	56.0
AWX86293.1\|1267209_1267548_+	DUF2511 domain-containing protein	A0A0M3ULF8	Salmonella_phage	1.7e-34	63.4
AWX86294.1\|1267569_1268070_+	hypothetical protein	A0A1D9C9Q4	Salinivibrio_phage	4.0e-48	62.0
AWX86295.1\|1268153_1269185_+\|integrase	site-specific integrase	A0A0M4S6G4	Salmonella_phage	1.3e-175	86.7
AWX86296.1\|1269416_1269875_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AWX86297.1\|1269932_1271291_+	PepSY domain-containing protein	NA	NA	NA	NA
AWX86298.1\|1271299_1271782_-	OmpA family protein	NA	NA	NA	NA
AWX86299.1\|1271795_1273019_-	diguanylate cyclase	NA	NA	NA	NA
AWX86300.1\|1273011_1273521_-	YfiR family protein	NA	NA	NA	NA
AWX86301.1\|1273863_1274934_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	3.7e-91	51.8
AWX86302.1\|1274943_1276065_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AWX86303.1\|1276127_1277000_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AWX86304.1\|1276996_1278157_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AWX86305.1\|1278411_1278747_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AWX86306.1\|1279018_1279756_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AWX86307.1\|1279887_1280868_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AWX86308.1\|1280864_1281596_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AWX86309.1\|1281724_1284298_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
1283063:1283078	attR	NA	NA	NA	NA
AWX86310.1\|1290366_1291665_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.4e-44	31.7
AWX86311.1\|1291668_1291992_-	YfiM family lipoprotein	NA	NA	NA	NA
AWX86312.1\|1292033_1293389_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AWX86313.1\|1293509_1296161_-	protein lysine acetyltransferase	NA	NA	NA	NA
AWX86314.1\|1296195_1296894_-	DTW domain-containing protein	NA	NA	NA	NA
AWX86315.1\|1296963_1297389_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AWX86316.1\|1297592_1298678_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_2

1470679 : 1568376

Klebsiella_phage(26.0%)

portal,transposase,plate,holin,integrase,protease,terminase,tRNA,tail

attL 1499957:1499980|attR 1545532:1545555

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX86466.1\|1470679_1472029_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AWX86467.1\|1472025_1472715_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AWX86468.1\|1472714_1474394_+	OmpA family protein	NA	NA	NA	NA
AWX86469.1\|1474396_1474888_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AWX86470.1\|1476172_1478530_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
AWX86471.1\|1479155_1479626_+	hypothetical protein	NA	NA	NA	NA
AWX86472.1\|1482556_1483357_+	hypothetical protein	NA	NA	NA	NA
AWX86473.1\|1483445_1484030_+	hypothetical protein	NA	NA	NA	NA
AWX86474.1\|1484581_1484845_+	PAAR domain-containing protein	R9U4D0	Rhizobium_phage	1.2e-06	50.0
AWX86475.1\|1484847_1486056_+	hypothetical protein	NA	NA	NA	NA
AWX86476.1\|1486048_1489420_+	type VI secretion protein VasK	NA	NA	NA	NA
AWX86477.1\|1489439_1491047_+	type VI secretion system protein TssA	NA	NA	NA	NA
AWX86478.1\|1491080_1492850_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AWX86479.1\|1492813_1493896_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AWX86480.1\|1493931_1494456_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AWX86481.1\|1494460_1496932_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
AWX86482.1\|1496932_1497817_+	glycine zipper family protein	NA	NA	NA	NA
AWX86483.1\|1498166_1498364_-	hypothetical protein	NA	NA	NA	NA
1499957:1499980	attL	NA	NA	NA	NA
AWX86484.1\|1500174_1501350_+\|integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	1.9e-202	86.1
AWX86485.1\|1501390_1502200_+	DUF2971 domain-containing protein	NA	NA	NA	NA
AWX86486.1\|1502240_1502423_-	DNA-binding protein	G3CFG7	Escherichia_phage	6.1e-15	65.5
AWX86487.1\|1502430_1503096_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	6.7e-51	66.7
AWX86488.1\|1503096_1503351_-	hypothetical protein	NA	NA	NA	NA
AWX86489.1\|1503343_1503568_-	hypothetical protein	S4TVX5	Salmonella_phage	1.3e-14	53.8
AWX86490.1\|1503564_1503693_-\|integrase	integrase	NA	NA	NA	NA
AWX86491.1\|1503882_1504743_-	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.6e-71	52.7
AWX86492.1\|1504824_1505637_-	hypothetical protein	NA	NA	NA	NA
AWX86493.1\|1505680_1506040_-	hypothetical protein	NA	NA	NA	NA
AWX86494.1\|1506464_1506644_+	hypothetical protein	S5FM78	Shigella_phage	1.7e-14	66.1
AWX86495.1\|1507605_1508316_-	LexA family transcriptional regulator	K7P8B2	Enterobacteria_phage	4.0e-86	67.5
AWX86496.1\|1508423_1508618_+	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	3.6e-21	79.4
AWX86497.1\|1508695_1509211_+	DNA-binding protein	A0A1C9II13	Salmonella_phage	5.2e-59	63.4
AWX86498.1\|1509249_1509528_+	hypothetical protein	NA	NA	NA	NA
AWX86499.1\|1509689_1509965_+	hypothetical protein	NA	NA	NA	NA
AWX86500.1\|1509957_1511487_+	ATP-dependent helicase	A0A286N2P9	Klebsiella_phage	3.3e-202	66.7
AWX86501.1\|1511483_1512455_+	DNA primase	A0A286N2Q0	Klebsiella_phage	1.2e-109	61.1
AWX90119.1\|1512424_1513069_+	NinG family protein	A0A1W6JNX3	Morganella_phage	1.5e-39	57.4
AWX86502.1\|1513065_1513710_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.0e-84	68.2
AWX86503.1\|1513699_1514104_+	antitermination protein	S5M7R9	Escherichia_phage	5.5e-32	53.2
AWX86504.1\|1514283_1514475_+	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	5.8e-24	87.3
AWX86505.1\|1514625_1515678_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	4.6e-171	80.4
AWX86506.1\|1515822_1516170_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.7e-38	70.1
AWX86507.1\|1516172_1516712_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	6.7e-102	99.4
AWX86508.1\|1516708_1517056_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	8.0e-40	80.9
AWX86509.1\|1517052_1517328_+	hypothetical protein	G8C7W1	Escherichia_phage	2.7e-14	47.2
AWX86510.1\|1517278_1517470_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	4.9e-23	88.1
AWX86511.1\|1517501_1517702_+	hypothetical protein	K7PHC3	Enterobacterial_phage	9.3e-17	68.3
AWX86512.1\|1517766_1518012_+	hypothetical protein	A0A286N2R1	Klebsiella_phage	1.8e-33	96.3
AWX90120.1\|1518237_1518498_+	hypothetical protein	NA	NA	NA	NA
AWX86513.1\|1518564_1518750_+	hypothetical protein	Q8W634	Enterobacteria_phage	1.9e-11	61.1
AWX86514.1\|1519070_1519562_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	6.4e-67	84.0
AWX86515.1\|1519561_1521670_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.5
AWX86516.1\|1521666_1521882_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.3e-24	77.1
AWX86517.1\|1521878_1523378_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.1e-247	83.6
AWX86518.1\|1523322_1525338_+\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	85.4
AWX86519.1\|1525418_1525745_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	4.7e-34	67.3
AWX86520.1\|1525737_1526031_+	ATP-binding protein	NA	NA	NA	NA
AWX86521.1\|1526020_1526572_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	5.3e-54	67.9
AWX86522.1\|1526568_1526967_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	3.2e-40	57.8
AWX86523.1\|1526974_1527457_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	5.7e-60	68.6
AWX86524.1\|1527499_1527895_+\|tail	phage tail protein	M9NZD7	Enterobacteria_phage	3.7e-09	28.4
AWX86525.1\|1527915_1528233_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.4e-19	51.5
AWX86526.1\|1529697_1530621_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AWX86527.1\|1531975_1532449_+	hypothetical protein	A0A286S298	Klebsiella_phage	3.9e-53	63.5
AWX86528.1\|1532435_1532918_+	ArsR family transcriptional regulator	A0A286S2B1	Klebsiella_phage	1.1e-55	68.4
AWX86529.1\|1532925_1533312_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
AWX86530.1\|1533308_1536377_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	66.5
AWX86531.1\|1536454_1538206_+	GDSL family lipase	A0A286S1P0	Klebsiella_phage	1.4e-23	53.3
AWX86532.1\|1538208_1538967_+	hypothetical protein	NA	NA	NA	NA
AWX90121.1\|1539057_1542192_-	SGNH/GDSL hydrolase family protein	A0A1I9SEN3	Klebsiella_phage	1.1e-103	32.0
AWX86533.1\|1542304_1542853_+	DNA-invertase	A0A286S1P7	Klebsiella_phage	3.2e-91	95.1
AWX86534.1\|1543057_1543309_+	hypothetical protein	NA	NA	NA	NA
AWX86535.1\|1543308_1544793_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AWX86536.1\|1544869_1545109_+	DNA polymerase V	I6PD82	Cronobacter_phage	6.8e-22	55.7
AWX86537.1\|1545065_1545437_+	hypothetical protein	K7PGV5	Enterobacterial_phage	9.2e-26	50.9
AWX86538.1\|1545643_1546573_-	hypothetical protein	E7DYY8	Enterobacteria_phage	1.6e-135	83.4
1545532:1545555	attR	NA	NA	NA	NA
AWX86539.1\|1546862_1547624_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
AWX86540.1\|1547681_1549010_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
AWX86541.1\|1549377_1549662_+	DUF406 family protein	NA	NA	NA	NA
AWX86542.1\|1549819_1551130_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
AWX86543.1\|1551129_1553274_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
AWX86544.1\|1553483_1553969_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
AWX86545.1\|1553987_1554539_-	endonuclease SmrB	NA	NA	NA	NA
AWX86546.1\|1554706_1555639_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AWX86547.1\|1555681_1556767_+	chorismate synthase	A0A291AU41	Pandoravirus	1.7e-88	46.9
AWX86548.1\|1556769_1557594_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
AWX86549.1\|1557593_1558403_+	hypothetical protein	NA	NA	NA	NA
AWX86550.1\|1558402_1558951_+	elongation factor P hydroxylase	NA	NA	NA	NA
AWX86551.1\|1558982_1559264_+	YfcL family protein	NA	NA	NA	NA
AWX90122.1\|1559423_1561412_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
AWX86552.1\|1561570_1562791_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
AWX86553.1\|1563000_1564176_+	MFS transporter	NA	NA	NA	NA
AWX86554.1\|1564262_1565240_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
AWX90123.1\|1565374_1566487_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.6e-20	27.9
AWX86555.1\|1566550_1567564_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AWX86556.1\|1567563_1568376_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA

DBSCAN-SWA_3

1829245 : 1839296

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX86772.1\|1829245_1830652_+	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	M4QQM4	Ostreococcus_lucimarinus_virus	8.0e-38	28.5
AWX86773.1\|1830875_1831940_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.9e-104	54.7
AWX86774.1\|1831966_1832836_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.7e-110	66.3
AWX86775.1\|1832867_1833758_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-27	33.2
AWX86776.1\|1833772_1834327_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.0e-52	58.2
AWX86777.1\|1834507_1835674_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.5
AWX86778.1\|1835997_1837002_+	acyltransferase	NA	NA	NA	NA
AWX86779.1\|1838291_1839296_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.8e-31	29.2

DBSCAN-SWA_4

2846519 : 2857402

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX87693.1\|2846519_2849627_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.3
AWX87694.1\|2849681_2850947_+	MFS transporter	NA	NA	NA	NA
AWX87695.1\|2850976_2852065_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	5.0e-205	96.7
AWX90185.1\|2852149_2852410_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AWX87696.1\|2852706_2853567_+	class A beta-lactamase	A0A077SL40	Escherichia_phage	3.4e-140	88.5
AWX87697.1\|2853586_2854348_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.1e-133	99.2
AWX87698.1\|2854609_2855512_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	4.2e-157	98.3
AWX87699.1\|2855523_2856789_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.2e-218	92.4
AWX87700.1\|2856781_2857402_+	aldolase	A0A077SK32	Escherichia_phage	5.9e-110	94.7

DBSCAN-SWA_5

3157354 : 3189137

Salmonella_phage(21.88%)

integrase,transposase

attL 3161893:3161909|attR 3189799:3189815

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX87959.1\|3157354_3157624_-	hypothetical protein	A0A2H5BN44	Klebsiella_phage	3.0e-34	86.5
AWX87960.1\|3159792_3162861_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	96.6
3161893:3161909	attL	NA	NA	NA	NA
AWX87961.1\|3162857_3163238_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.2e-68	95.2
AWX87962.1\|3163247_3163730_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.5e-80	92.5
AWX87963.1\|3163910_3165185_-\|transposase	IS481 family transposase	A0A286S298	Klebsiella_phage	4.0e-28	71.4
AWX87964.1\|3165366_3165813_+	hypothetical protein	NA	NA	NA	NA
AWX90200.1\|3165718_3165976_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	1.3e-42	100.0
AWX87965.1\|3166129_3166912_-	antitermination protein	F1C595	Cronobacter_phage	3.2e-113	78.7
AWX87966.1\|3166908_3167277_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.5e-41	63.8
AWX87967.1\|3167273_3167570_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	2.3e-35	70.8
AWX87968.1\|3167572_3167779_-	hypothetical protein	H6WRY8	Salmonella_phage	1.1e-23	72.7
AWX87969.1\|3167778_3168378_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	79.4
AWX90201.1\|3168451_3168676_-	hypothetical protein	NA	NA	NA	NA
AWX87970.1\|3170047_3170347_-	hypothetical protein	NA	NA	NA	NA
AWX87971.1\|3170442_3170871_-	hypothetical protein	NA	NA	NA	NA
AWX87972.1\|3170874_3171096_-	hypothetical protein	A9YWV3	Burkholderia_phage	1.3e-11	49.4
AWX87973.1\|3171092_3171347_-	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
AWX87974.1\|3171339_3171543_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	1.3e-26	84.8
AWX87975.1\|3171539_3172325_-	hypothetical protein	C7BGF1	Burkholderia_phage	3.6e-64	52.5
AWX87976.1\|3172317_3172653_-	hypothetical protein	H6WRX9	Salmonella_phage	7.6e-11	43.0
AWX87977.1\|3172645_3173359_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	9.0e-70	58.4
AWX87978.1\|3173355_3174276_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	4.8e-92	60.7
AWX87979.1\|3174627_3175164_-	hypothetical protein	M9NZI6	Enterobacteria_phage	7.0e-59	67.8
AWX87980.1\|3175166_3175397_-	hypothetical protein	H6WRX5	Salmonella_phage	2.1e-12	45.3
AWX87981.1\|3175508_3175922_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AWX87982.1\|3176109_3176208_+	hypothetical protein	NA	NA	NA	NA
AWX87983.1\|3176314_3176506_+	DUF1482 family protein	NA	NA	NA	NA
AWX87984.1\|3176514_3176670_+	hypothetical protein	K7PGY4	Enterobacteria_phage	2.0e-14	71.2
AWX87985.1\|3176807_3179903_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	4.1e-292	56.8
AWX87986.1\|3179915_3181004_+	enterohemolysin	H6WRX0	Salmonella_phage	3.7e-107	56.2
AWX87987.1\|3181038_3181383_+	hypothetical protein	NA	NA	NA	NA
AWX87988.1\|3181375_3181987_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	4.1e-39	76.3
AWX87989.1\|3181983_3182292_+	hypothetical protein	I6PD68	Cronobacter_phage	4.2e-24	56.9
AWX90202.1\|3182299_3182539_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
AWX87990.1\|3182548_3182863_+	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AWX87991.1\|3182759_3183947_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	2.4e-120	52.2
AWX87992.1\|3184123_3185014_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
AWX87993.1\|3185013_3186006_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AWX87994.1\|3186007_3186817_+	peptide ABC transporter ATP-binding protein SapF	G3M9Y6	Bacillus_virus	1.2e-14	33.7
AWX87995.1\|3186846_3188346_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	2.5e-61	33.6
AWX87996.1\|3188342_3189137_-	histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP	G9BWD6	Planktothrix_phage	6.6e-29	37.4
3189799:3189815	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3313125 : 3325735

Enterobacteria_phage(62.5%)

tail,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX88111.1\|3313125_3313626_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AWX88112.1\|3313743_3314190_+	DUF441 domain-containing protein	NA	NA	NA	NA
AWX90209.1\|3314173_3314965_-	AraC family transcriptional regulator	NA	NA	NA	NA
AWX88113.1\|3315066_3316251_+	cyanate MFS transporter	NA	NA	NA	NA
AWX88114.1\|3316282_3316975_-	hypothetical protein	NA	NA	NA	NA
AWX88115.1\|3317120_3317630_+	DUF523 domain-containing protein	NA	NA	NA	NA
AWX90210.1\|3317616_3317973_+	DUF488 domain-containing protein	NA	NA	NA	NA
AWX88116.1\|3317962_3318202_-	DUF333 domain-containing protein	NA	NA	NA	NA
AWX88117.1\|3318468_3318720_-	hypothetical protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
AWX88118.1\|3318763_3319903_-	phage late control D family protein	B9A7A9	Serratia_phage	9.4e-146	71.0
AWX88119.1\|3320057_3321230_+\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	1.0e-158	70.7
AWX88120.1\|3321229_3321745_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	61.2
AWX88121.1\|3321790_3322108_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	1.0e-17	54.8
AWX90211.1\|3322107_3322266_+\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
AWX88122.1\|3322252_3325228_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	1.8e-220	46.7
AWX88123.1\|3325243_3325735_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	7.3e-55	62.7

DBSCAN-SWA_7

3329286 : 3361000

Enterobacteria_phage(58.33%)

portal,capsid,transposase,plate,integrase,terminase,tail

attL 3318355:3318371|attR 3357266:3357282

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3318355:3318371	attL	NA	NA	NA	NA
AWX88125.1\|3329286_3330318_-\|transposase	IS630-like element ISSpu2 family transposase	NA	NA	NA	NA
AWX88126.1\|3330338_3331169_+	hypothetical protein	NA	NA	NA	NA
AWX88127.1\|3331388_3332486_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	3.2e-10	29.0
AWX88128.1\|3332485_3332698_-	hypothetical protein	NA	NA	NA	NA
AWX88129.1\|3334795_3335719_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AWX88130.1\|3336776_3337700_-\|plate	baseplate assembly protein	A0A0A7NPY5	Enterobacteria_phage	7.6e-53	43.6
AWX88131.1\|3337701_3338052_-\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	3.6e-24	60.4
AWX88132.1\|3338048_3338636_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.7e-61	61.0
AWX88133.1\|3338632_3339268_-	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	1.0e-56	51.4
AWX88134.1\|3339264_3339732_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	9.1e-47	59.2
AWX90212.1\|3339913_3340243_-	DUF2570 domain-containing protein	NA	NA	NA	NA
AWX88135.1\|3340254_3340800_-	lysozyme	Q1I0Z1	Pasteurella_virus	1.3e-31	44.1
AWX88136.1\|3340796_3341081_-\|tail	phage tail protein	NA	NA	NA	NA
AWX88137.1\|3341071_3341272_-\|tail	phage tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
AWX88138.1\|3341271_3341787_-\|capsid	capsid assembly protein	A0A0A7NPU2	Enterobacteria_phage	4.1e-40	49.4
AWX88139.1\|3341899_3342757_-\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	3.7e-70	61.3
AWX88140.1\|3342806_3343841_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	8.1e-96	50.0
AWX88141.1\|3343852_3344692_-\|capsid	phage capsid protein	A0A0A7NRY7	Enterobacteria_phage	2.1e-94	65.9
AWX88142.1\|3344848_3346576_+	oxidoreductase	A0A0A7NV54	Enterobacteria_phage	1.5e-232	68.1
AWX88143.1\|3346569_3347631_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	3.1e-143	68.4
AWX88144.1\|3348218_3349562_-	hypothetical protein	NA	NA	NA	NA
AWX88145.1\|3352387_3353344_-	DNA adenine methylase	A0A0M4QWR0	Salmonella_phage	3.9e-84	53.3
AWX90213.1\|3353340_3353568_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.9e-05	41.0
AWX88146.1\|3353576_3354143_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	3.6e-13	32.1
AWX88147.1\|3354139_3354364_-	hypothetical protein	NA	NA	NA	NA
AWX88148.1\|3354432_3354705_-	hypothetical protein	NA	NA	NA	NA
AWX88149.1\|3354720_3355098_-	hypothetical protein	NA	NA	NA	NA
AWX88150.1\|3355113_3355332_-	DUF4761 domain-containing protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	49.1
AWX88151.1\|3355352_3355631_-	hypothetical protein	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
AWX88152.1\|3355751_3356051_+	XRE family transcriptional regulator	Q1JS61	Enterobacteria_phage	6.5e-38	77.8
AWX88153.1\|3356166_3357150_+\|integrase	integrase	Q83VS6	Escherichia_phage	4.9e-151	80.1
AWX88154.1\|3357413_3358427_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	9.3e-12	33.1
3357266:3357282	attR	NA	NA	NA	NA
AWX88155.1\|3358484_3358586_+	hypothetical protein	NA	NA	NA	NA
AWX90214.1\|3358543_3358660_+	hypothetical protein	NA	NA	NA	NA
AWX88156.1\|3358778_3358904_+	hypothetical protein	NA	NA	NA	NA
AWX88157.1\|3358963_3359227_-	DUF2534 family protein	NA	NA	NA	NA
AWX88158.1\|3359357_3359996_-	leucine efflux protein	NA	NA	NA	NA
AWX88159.1\|3360085_3361000_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.2e-71	49.6

DBSCAN-SWA_8

3388126 : 3440369

Klebsiella_phage(48.78%)

portal,capsid,transposase,holin,integrase,terminase,tail,head

attL 3381735:3381750|attR 3448484:3448499

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3381735:3381750	attL	NA	NA	NA	NA
AWX88188.1\|3388126_3389191_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.7e-14	32.2
AWX88189.1\|3389615_3391052_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	2.4e-98	53.7
AWX88190.1\|3391113_3402330_-	hypothetical protein	Q6UAW1	Klebsiella_phage	0.0e+00	50.0
AWX90215.1\|3402392_3402986_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	2.2e-77	75.6
AWX88191.1\|3403426_3404350_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.1e-166	92.8
AWX88192.1\|3404482_3405193_-	peptidase P60	Q6UAW4	Klebsiella_phage	9.4e-136	89.8
AWX88193.1\|3405194_3405950_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	5.1e-124	80.1
AWX88194.1\|3405946_3406285_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.4e-57	88.4
AWX88195.1\|3406284_3409620_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.5
AWX88196.1\|3409619_3409838_-	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AWX88197.1\|3409852_3410218_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AWX88198.1\|3410275_3410737_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AWX88199.1\|3410768_3411170_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.7e-62	94.0
AWX88200.1\|3411166_3411556_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AWX88201.1\|3411536_3411875_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AWX88202.1\|3411871_3412189_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AWX88203.1\|3412169_3412430_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.5e-22	63.9
AWX88204.1\|3412488_3413775_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
AWX88205.1\|3413852_3414773_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AWX88206.1\|3414809_3416069_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.4e-222	90.0
AWX88207.1\|3416068_3416248_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AWX88208.1\|3416241_3417963_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	6.5e-191	57.6
AWX88209.1\|3417962_3418397_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AWX88210.1\|3418646_3419078_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.3
AWX88211.1\|3419074_3419392_-	hypothetical protein	NA	NA	NA	NA
AWX88212.1\|3419343_3419706_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	3.4e-57	81.7
AWX88213.1\|3419859_3420081_-	DNA gyrase subunit B	NA	NA	NA	NA
AWX88214.1\|3420187_3420376_-	hypothetical protein	NA	NA	NA	NA
AWX88215.1\|3421455_3421806_-	hypothetical protein	R9TPM9	Aeromonas_phage	1.8e-10	39.8
AWX88216.1\|3421802_3422300_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.9e-79	85.8
AWX88217.1\|3422299_3422515_-\|holin	holin	A5LH82	Enterobacteria_phage	7.9e-30	87.3
AWX88218.1\|3423938_3424541_-	hypothetical protein	H9C175	Pectobacterium_phage	2.4e-76	68.1
AWX88219.1\|3424557_3425589_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.1e-96	49.6
AWX88220.1\|3425588_3425792_-	hypothetical protein	NA	NA	NA	NA
AWX88221.1\|3425788_3426181_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	1.0e-11	36.6
AWX88222.1\|3426221_3426512_-	hypothetical protein	H6WRY6	Salmonella_phage	6.1e-17	56.9
AWX88223.1\|3426523_3426757_-	DinI family protein	K7PM44	Enterobacteria_phage	1.7e-25	71.1
AWX88224.1\|3426924_3427146_+	hypothetical protein	NA	NA	NA	NA
AWX88225.1\|3427146_3428244_-	DNA (cytosine-5-)-methyltransferase	A0A0R6PG08	Moraxella_phage	1.8e-53	38.3
AWX88226.1\|3428236_3430348_-	hypothetical protein	NA	NA	NA	NA
AWX88227.1\|3430638_3431079_-	PerC family transcriptional regulator	NA	NA	NA	NA
AWX88228.1\|3431092_3431557_-	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-62	70.9
AWX90216.1\|3431549_3432554_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	2.1e-32	35.6
AWX88229.1\|3432613_3433168_-	hypothetical protein	NA	NA	NA	NA
AWX88230.1\|3433170_3433392_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.2e-28	75.3
AWX90217.1\|3433662_3433917_+	hypothetical protein	H6WRX4	Salmonella_phage	1.6e-13	54.8
AWX88231.1\|3434190_3434370_+	hypothetical protein	NA	NA	NA	NA
AWX88232.1\|3434505_3434724_+	hypothetical protein	NA	NA	NA	NA
AWX88233.1\|3434733_3434928_+	DUF1482 family protein	NA	NA	NA	NA
AWX88234.1\|3434970_3435315_+	transcriptional regulator	NA	NA	NA	NA
AWX88235.1\|3435456_3437595_+	exonuclease	S4TNL0	Salmonella_phage	2.1e-98	43.1
AWX90218.1\|3437647_3437893_+	excisionase	NA	NA	NA	NA
AWX88236.1\|3437873_3439001_+\|integrase	integrase	O21925	Phage_21	4.4e-119	58.4
AWX88237.1\|3439118_3440369_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
3448484:3448499	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3707800 : 3717261

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AWX88459.1\|3707800_3709522_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	6.4e-13	33.0
AWX90233.1\|3709561_3710263_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AWX88460.1\|3710616_3710835_+	translation initiation factor IF-1	NA	NA	NA	NA
AWX88461.1\|3710957_3713237_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.0
AWX88462.1\|3713267_3713585_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AWX88463.1\|3713910_3714132_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AWX88464.1\|3714208_3716149_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	1.4e-37	40.5
AWX88465.1\|3716145_3717261_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_10

4201220 : 4247334

uncultured_Caudovirales_phage(28.3%)

holin,integrase,terminase,lysis,tRNA,tail,head

attL 4201019:4201065|attR 4244404:4244450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4201019:4201065	attL	NA	NA	NA	NA
AWX88883.1\|4201220_4201538_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.1e-22	52.0
AWX88884.1\|4201537_4201777_-	hypothetical protein	K7P7N3	Enterobacteria_phage	3.6e-15	51.9
AWX88885.1\|4202646_4204449_-	GDSL family lipase	A0A286S1P0	Klebsiella_phage	2.6e-17	43.5
AWX88886.1\|4204700_4205582_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	7.3e-29	60.2
AWX88887.1\|4205581_4206355_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	1.1e-76	54.1
AWX88888.1\|4206351_4207548_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.5e-157	72.6
AWX88889.1\|4207547_4207901_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	8.7e-50	79.5
AWX88890.1\|4207902_4208556_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	2.4e-61	50.8
AWX88891.1\|4209181_4209532_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	5.5e-20	41.6
AWX88892.1\|4209528_4210557_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	1.3e-98	54.0
AWX88893.1\|4210559_4210862_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.6e-26	55.2
AWX88894.1\|4210862_4211462_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	5.8e-54	58.1
AWX88895.1\|4211461_4213387_-	hypothetical protein	A0A0M4REK7	Salmonella_phage	7.3e-183	71.3
AWX90264.1\|4213376_4213529_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	2.4e-17	82.0
AWX88896.1\|4213570_4213990_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	1.0e-41	66.7
AWX88897.1\|4213993_4214437_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	1.2e-61	80.0
AWX88898.1\|4214446_4215592_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	2.2e-166	77.4
AWX88899.1\|4215595_4216036_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AWX88900.1\|4216130_4216517_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	2.8e-49	79.0
AWX88901.1\|4216516_4217023_-	hypothetical protein	NA	NA	NA	NA
AWX88902.1\|4217019_4217439_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.4e-40	60.7
AWX88903.1\|4217407_4217689_-	hypothetical protein	NA	NA	NA	NA
AWX88904.1\|4217728_4218670_-	hypothetical protein	A0A2H4J191	uncultured_Caudovirales_phage	5.2e-134	74.8
AWX88905.1\|4218681_4219176_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AWX88906.1\|4219179_4220382_-	hypothetical protein	A0A0M4R5A6	Salmonella_phage	9.1e-107	54.6
AWX88907.1\|4220391_4220586_-	hypothetical protein	NA	NA	NA	NA
AWX90265.1\|4220631_4221180_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	1.0e-49	56.9
AWX88908.1\|4221235_4222687_-	hypothetical protein	A0A0M4S6U1	Salmonella_phage	1.1e-191	68.8
AWX88909.1\|4222924_4224325_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	1.2e-187	69.1
AWX88910.1\|4224275_4225052_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	3.9e-10	46.5
AWX88911.1\|4225260_4225728_-\|lysis	lysis protein	Q76H63	Enterobacteria_phage	4.1e-55	72.3
AWX90266.1\|4225724_4226222_-	lysozyme	K7P7Q3	Enterobacteria_phage	1.3e-78	84.2
AWX88912.1\|4226199_4226469_-\|holin	holin	K7P6H9	Enterobacteria_phage	2.1e-32	78.3
AWX90267.1\|4227381_4228071_-	antiterminator	I6PDF8	Cronobacter_phage	8.1e-60	55.4
AWX88913.1\|4228070_4228211_-	YlcG family protein	NA	NA	NA	NA
AWX90268.1\|4228851_4229448_-	hypothetical protein	A0A0U2RT94	Escherichia_phage	9.5e-57	54.3
AWX88914.1\|4229568_4229838_-	hypothetical protein	H6WRY4	Salmonella_phage	2.4e-36	83.0
AWX88915.1\|4229884_4230280_-	hypothetical protein	A0A193GYM6	Enterobacter_phage	6.1e-52	80.8
AWX88916.1\|4231276_4231504_-	hypothetical protein	NA	NA	NA	NA
AWX88917.1\|4232005_4232257_-	hypothetical protein	NA	NA	NA	NA
AWX88918.1\|4232253_4232724_-	hypothetical protein	R9TME7	Aeromonas_phage	2.3e-34	56.5
AWX88919.1\|4232720_4233023_-	MarR family transcriptional regulator	NA	NA	NA	NA
AWX88920.1\|4233022_4234453_-	helicase DnaB	Q9MCT4	Escherichia_phage	2.2e-184	66.7
AWX88921.1\|4234442_4235342_-	DNA replication protein	F1C5C3	Cronobacter_phage	7.8e-87	54.5
AWX88922.1\|4235567_4235888_-	hypothetical protein	A0A0M4RU01	Salmonella_phage	3.8e-36	68.9
AWX88923.1\|4235927_4236149_-	helix-turn-helix domain-containing protein	Q716D6	Shigella_phage	1.8e-13	55.1
AWX88924.1\|4236251_4236947_+	phage repressor protein	K7P7I4	Enterobacteria_phage	8.2e-76	62.4
AWX88925.1\|4237760_4237976_+	hypothetical protein	B5WZV1	Pseudomonas_phage	8.2e-11	47.1
AWX88926.1\|4238075_4238270_+	hypothetical protein	NA	NA	NA	NA
AWX88927.1\|4238358_4239330_+	hypothetical protein	M9P0E1	Enterobacteria_phage	1.4e-65	89.1
AWX88928.1\|4239337_4239622_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.6e-38	77.7
AWX88929.1\|4239638_4240385_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	5.3e-65	67.7
AWX88930.1\|4240381_4241005_+	exonuclease	A0A0S2SY31	Pseudomonas_phage	5.3e-58	60.2
AWX90269.1\|4241033_4241561_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	9.3e-56	60.4
AWX88931.1\|4241557_4242328_+	dcm methylase	D5LH17	Escherichia_phage	5.5e-65	51.6
AWX88932.1\|4242324_4242543_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	8.4e-11	47.2
AWX88933.1\|4242544_4242763_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	1.9e-15	58.6
AWX88934.1\|4242762_4243002_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	3.9e-09	43.6
AWX90270.1\|4243014_4243350_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AWX90271.1\|4243346_4244390_+\|integrase	integrase	G8C7S0	Escherichia_phage	8.5e-178	85.6
AWX88935.1\|4244459_4244684_-	hypothetical protein	NA	NA	NA	NA
4244404:4244450	attR	NA	NA	NA	NA
AWX88936.1\|4244822_4245689_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
AWX88937.1\|4245690_4245903_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
AWX88938.1\|4245948_4247334_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4

DBSCAN-SWA_11

4920748 : 4981330

Enterobacteria_phage(40.0%)

integrase,tRNA,transposase

attL 4914158:4914174|attR 4990151:4990167

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4914158:4914174	attL	NA	NA	NA	NA
AWX89536.1\|4920748_4921756_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AWX89537.1\|4922061_4923129_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWX89538.1\|4923125_4925870_+	ABC transporter ATP-binding protein/permease	A0A2H4PQG7	Staphylococcus_phage	5.1e-20	29.8
AWX89539.1\|4925869_4926994_+	hypothetical protein	NA	NA	NA	NA
AWX89540.1\|4927035_4927353_-	hypothetical protein	NA	NA	NA	NA
AWX89541.1\|4927675_4927873_-	DUF2574 family protein	NA	NA	NA	NA
AWX89542.1\|4933846_4934968_+	cupin domain-containing protein	NA	NA	NA	NA
AWX89543.1\|4935021_4936464_-	Cu(+)/Ag(+) sensor histidine kinase	A0A1V0SGX0	Hokovirus	5.4e-13	27.6
AWX89544.1\|4936453_4937137_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.0e-30	36.0
AWX90303.1\|4937309_4938695_+	copper transporter	NA	NA	NA	NA
AWX89545.1\|4938712_4939057_+	copper-binding protein	NA	NA	NA	NA
AWX89546.1\|4939101_4940367_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AWX89547.1\|4940378_4943528_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	9.8e-60	22.1
AWX89548.1\|4943600_4943948_+	DUF1294 domain-containing protein	NA	NA	NA	NA
AWX89549.1\|4943957_4944491_-	hypothetical protein	A0A1W6JNX6	Morganella_phage	8.2e-52	59.6
AWX89550.1\|4944607_4945336_+	helix-turn-helix-type transcriptional regulator	Q9EYF2	Enterobacteria_phage	1.4e-46	47.4
AWX89551.1\|4945567_4946002_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
AWX89552.1\|4945998_4946718_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AWX89553.1\|4946714_4947974_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AWX89554.1\|4947975_4948698_+	DUF1365 domain-containing protein	NA	NA	NA	NA
AWX89555.1\|4948694_4949915_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AWX89556.1\|4949911_4950397_+	DUF2878 domain-containing protein	NA	NA	NA	NA
AWX89557.1\|4950393_4950918_+	hypothetical protein	NA	NA	NA	NA
AWX89558.1\|4950914_4951466_+	DUF3833 domain-containing protein	NA	NA	NA	NA
AWX89559.1\|4951462_4952422_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
AWX89560.1\|4952456_4952870_+	hypothetical protein	NA	NA	NA	NA
AWX89561.1\|4953095_4954478_-	carbohydrate porin	NA	NA	NA	NA
AWX89562.1\|4954808_4956128_-	xylose isomerase	NA	NA	NA	NA
AWX89563.1\|4956675_4957599_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AWX89564.1\|4957635_4959060_+	MFS transporter	NA	NA	NA	NA
AWX89565.1\|4959118_4960798_+	glycoside hydrolase 43 family protein	NA	NA	NA	NA
AWX89566.1\|4960880_4961519_-	HNH endonuclease	NA	NA	NA	NA
AWX89567.1\|4961698_4962568_+	HNH endonuclease	NA	NA	NA	NA
AWX89568.1\|4963431_4964355_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AWX89569.1\|4964421_4965542_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.5e-137	89.6
AWX89570.1\|4966466_4967498_+\|transposase	IS630-like element ISSpu2 family transposase	NA	NA	NA	NA
AWX89571.1\|4967714_4969019_+	hypothetical protein	NA	NA	NA	NA
AWX89572.1\|4969062_4969584_-	hypothetical protein	NA	NA	NA	NA
AWX89573.1\|4969929_4973160_+	DEAD/DEAH box helicase	Q6NDX2	Leptospira_phage	2.9e-14	25.7
AWX89574.1\|4973201_4974125_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AWX89575.1\|4974229_4974424_+	hypothetical protein	NA	NA	NA	NA
AWX89576.1\|4974510_4976133_+	SAM-dependent DNA methyltransferase	J7I0U9	Acinetobacter_phage	8.1e-34	29.7
AWX89577.1\|4976129_4977308_+	restriction endonuclease	E3T4D5	Cafeteria_roenbergensis_virus	2.3e-14	28.1
AWX89578.1\|4977304_4979095_+	hypothetical protein	Q2P9X8	Enterobacteria_phage	2.6e-09	29.4
AWX89579.1\|4979094_4979994_+	hypothetical protein	NA	NA	NA	NA
AWX89580.1\|4980076_4981330_-\|integrase	integrase	Q7M297	Enterobacteria_phage	7.6e-80	39.4
4990151:4990167	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030171

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection