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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP025137 Lactobacillus sakei strain WiKim0072 plasmid pLSW72_1, complete sequence 0 crisprs NA 0 0 5 0
CP025136 Lactobacillus sakei strain WiKim0072 chromosome, complete genome 0 crisprs DEDDh,cas3,csa3,DinG 0 0 6 0
CP025138 Lactobacillus sakei strain WiKim0072 plasmid pLSW72_2, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. CP025136
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 79569 : 91623 12 Enterococcus_phage(30.0%) transposase NA
DBSCAN-SWA_2 191929 : 200038 9 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_3 1415471 : 1425105 9 Streptococcus_phage(33.33%) protease NA
DBSCAN-SWA_4 1520720 : 1529014 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 1647971 : 1740279 108 Lactobacillus_phage(39.53%) integrase,capsid,holin,tail,transposase,terminase,tRNA attL 1647634:1647650|attR 1677093:1677109
DBSCAN-SWA_6 1895951 : 1903347 7 Staphylococcus_phage(33.33%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP025137
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 3796 3 Clostridium_phage(33.33%) transposase NA
DBSCAN-SWA_2 8648 : 9602 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_3 13150 : 27031 11 Enterococcus_phage(22.22%) integrase,holin,transposase attL 22172:22214|attR 36357:36399
DBSCAN-SWA_4 34796 : 35825 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 41180 : 41630 1 Bacillus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage