CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP026548	Faecalibacterium prausnitzii strain 942/30-2 chromosome, complete genome	3 crisprs	DinG,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,WYL,csa3,PD-DExK,DEDDh	0	13	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP026548_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026548_2

682179-685446

TypeI

Consensus_repeat	Method
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	PILER-CR
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CRISPRCasFinder
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CRT

48 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of CP026548_2

>merge|CP026548|2|682179-685446|PILER-CR,CRISPRCasFinder,CRT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATAATAATCCAGTGCTCATTTTTTGATCTCCTTCGGTGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATATTCCATTTTACATTCCTATGCACTTAGGAGACCCGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATAAGACAGTTGCAACGCGATTGATGCCGGAAGAATGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATCGATCTGGAAAACAATGTGTATGAGACGAACGAGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATCTGCGTCTGCGGCCGGAGCATACCGAAGCTCACGTGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATCGCCTCCGGTGCGCTGTTGCCGTCGTACAGCGTCGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATTGCTCCGATTTAATGCACCGGACCGCATACCGGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATAGCCGCTCTATCGGGACGTTCCGCAGCCCGGACCGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATATAAGCAGCCTGCGGGTCAGGGAACAGACCGGGCGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATTCGCTACCAGTGGCACTAGGCATGGCAGTCAGGCTGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATTCTTGTGTCTCCTTCGATAACGCCCTTGCATCTGTGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATCTCAGTCGTACGGCTCAGTGAGCAAGAGCTGAGGTCGCCCTCCTTGCGGAGGGCGTGGATAGAAATTTTTCCAGGCCGCACTCCACCATCTTGCTGCTGGCCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATACAAATGAAACGGGTAAAAAATTAGTTGGAAATGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATAATCAGGATAACACCCTTGCAGACACGCTTATCCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATGACGAACGCAACGGCAATTTCGAGGAAGCAAAGGAGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCTCCTTGTCATGTAGCGCGTGATAAATCGCGTCCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCCGTTCTTCCCGAAAGAAACGGCAGACCAGTTGGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATCCACCCGGCGGGCATAGGCCGCGCTGGCAAGAGCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATGTAAGAAGAAGCTCGGTGCAATCAAAATCGGAAAGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCGTCATCAGAGTAGCGGACGGCAAAGTAGCCGCCGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATCCAGCTCAGGCGCTCAGTGTTGATACCTGCATGTCGCCCTCCTCGCAGAGGGCGTGGATAGAAATACCTCATAGCCTTTGCCAAGCGTCGCGTCGCAAGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATGGGTCAAACTTGAGGCCGTCCCGGTAGCCCTTCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATAGCGGTGCAGGCTCAACCACGGTGGGAGTGCTGGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATAGCGAGCTTTACAGCATCCCGGCATGAACGCCGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCAGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTTTGCGTTGTACCGCGCCGGTCCTGCGACGGCGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACTGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTGTGCGCTGCGCCGCTCCGGTGCAGGCAGGTCAAGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATACCCACGGACGGGAGCTCACATGGCAACCCTCAGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATAGGCTGTTGTAGTCGCTGAATACGCCGCTCCGGCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTACTCTCGTCGTGGATGCAATACCTACAATTTTTGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTGCCTCGTCACGGGTCAGATGCGGATGCGGCATCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATGTACCCGTTAGCAAAGGCCACCAGGCCGTTAGTGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATATTATCATTGATCGTATGAAGAGATCCAGAAATAGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATACGACAACAGCATACTTTCGCACACCACGGCGGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTCGTGGTGGCCTTGCCCATATCCAGTGCTGCTTGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTCGCTGGCCAGAGGGCAGCCATGCGCACTGCATCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATCAGACCGAAAGCATCCAACCAGTCGAAGAAGTCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCGACCTCGAAGCTGCAGGCAGTTTACCGCAAGTTTGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATACGCTGTATTTACGGTTGGATAGCTGGCTGATTTGGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTGACGGCAAGACCCAGCGCGTGGATGACCTCTTTGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATATGAGAAGCTGGGCATCAAGGATAAGTATACCGATGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATTTCGATCTTCTCGCGCAGATGGAACGGCTCATAGGCGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATCGGCCAGCCTGACCCTCCAGACCCGCCGCAGAACGTCGCCCTCCTCGCGGAGGGCGTGGATAGAAATGGCAAGAAGTTTGGCTTCGCACTGGATGTTCTCACGTCGCCTTCCTCGCGGAGGGCGTGGATAGAAATACCGCATAACCCCACTGGAAAACGCCATCACGCAGTCGCCCTCCTCGCGGAGGGCGCAAGTAGAAATC

>CP026548|2|1|682179-685378|PILER-CR
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AATAATCCAGTGCTCATTTTTTGATCTCCTTCGGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATTCCATTTTACATTCCTATGCACTTAGGAGACCC
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AAGACAGTTGCAACGCGATTGATGCCGGAAGAAT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGATCTGGAAAACAATGTGTATGAGACGAACGA
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTGCGTCTGCGGCCGGAGCATACCGAAGCTCACGTG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGCCTCCGGTGCGCTGTTGCCGTCGTACAGCGTCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TGCTCCGATTTAATGCACCGGACCGCATACCGG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AGCCGCTCTATCGGGACGTTCCGCAGCCCGGACCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATAAGCAGCCTGCGGGTCAGGGAACAGACCGGGCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCGCTACCAGTGGCACTAGGCATGGCAGTCAGGCT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCTTGTGTCTCCTTCGATAACGCCCTTGCATCTGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTCAGTCGTACGGCTCAGTGAGCAAGAGCTGAG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TTTTCCAGGCCGCACTCCACCATCTTGCTGCTGGCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACAAATGAAACGGGTAAAAAATTAGTTGGAAATG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AATCAGGATAACACCCTTGCAGACACGCTTATCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GACGAACGCAACGGCAATTTCGAGGAAGCAAAGGA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTCCTTGTCATGTAGCGCGTGATAAATCGCGTCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCGTTCTTCCCGAAAGAAACGGCAGACCAGTTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCACCCGGCGGGCATAGGCCGCGCTGGCAAGAGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GTAAGAAGAAGCTCGGTGCAATCAAAATCGGAAAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGTCATCAGAGTAGCGGACGGCAAAGTAGCCGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCAGCTCAGGCGCTCAGTGTTGATACCTGCAT
GTCGCCCTCCTCGCAGAGGGCGTGGATAGAAAT	ACCTCATAGCCTTTGCCAAGCGTCGCGTCGCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGGTCAAACTTGAGGCCGTCCCGGTAGCCCTTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGGTGCAGGCTCAACCACGGTGGGAGTGCTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGAGCTTTACAGCATCCCGGCATGAACGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTTGCGTTGTACCGCGCCGGTCCTGCGACGGCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGTGCGCTGCGCCGCTCCGGTGCAGGCAGGTCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACCCACGGACGGGAGCTCACATGGCAACCCTCAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGGCTGTTGTAGTCGCTGAATACGCCGCTCCGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TACTCTCGTCGTGGATGCAATACCTACAATTTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGCCTCGTCACGGGTCAGATGCGGATGCGGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGTACCCGTTAGCAAAGGCCACCAGGCCGTTAGT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATATTATCATTGATCGTATGAAGAGATCCAGAAATA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGACAACAGCATACTTTCGCACACCACGGCGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGTGGTGGCCTTGCCCATATCCAGTGCTGCTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGCTGGCCAGAGGGCAGCCATGCGCACTGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCAGACCGAAAGCATCCAACCAGTCGAAGAAGTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGACCTCGAAGCTGCAGGCAGTTTACCGCAAGTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGCTGTATTTACGGTTGGATAGCTGGCTGATTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGACGGCAAGACCCAGCGCGTGGATGACCTCTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGAGAAGCTGGGCATCAAGGATAAGTATACCGAT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTCGATCTTCTCGCGCAGATGGAACGGCTCATAGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGGCCAGCCTGACCCTCCAGACCCGCCGCAGAAC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGCAAGAAGTTTGGCTTCGCACTGGATGTTCTCAC
GTCGCCTTCCTCGCGGAGGGCGTGGATAGAAAT

>CP026548|2|2|682179-685446|CRISPRCasFinder
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AATAATCCAGTGCTCATTTTTTGATCTCCTTCGGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATTCCATTTTACATTCCTATGCACTTAGGAGACCC
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AAGACAGTTGCAACGCGATTGATGCCGGAAGAAT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGATCTGGAAAACAATGTGTATGAGACGAACGA
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTGCGTCTGCGGCCGGAGCATACCGAAGCTCACGTG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGCCTCCGGTGCGCTGTTGCCGTCGTACAGCGTCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TGCTCCGATTTAATGCACCGGACCGCATACCGG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AGCCGCTCTATCGGGACGTTCCGCAGCCCGGACCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATAAGCAGCCTGCGGGTCAGGGAACAGACCGGGCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCGCTACCAGTGGCACTAGGCATGGCAGTCAGGCT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCTTGTGTCTCCTTCGATAACGCCCTTGCATCTGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTCAGTCGTACGGCTCAGTGAGCAAGAGCTGAG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TTTTCCAGGCCGCACTCCACCATCTTGCTGCTGGCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACAAATGAAACGGGTAAAAAATTAGTTGGAAATG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AATCAGGATAACACCCTTGCAGACACGCTTATCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GACGAACGCAACGGCAATTTCGAGGAAGCAAAGGA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTCCTTGTCATGTAGCGCGTGATAAATCGCGTCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCGTTCTTCCCGAAAGAAACGGCAGACCAGTTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCACCCGGCGGGCATAGGCCGCGCTGGCAAGAGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GTAAGAAGAAGCTCGGTGCAATCAAAATCGGAAAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGTCATCAGAGTAGCGGACGGCAAAGTAGCCGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCAGCTCAGGCGCTCAGTGTTGATACCTGCAT
GTCGCCCTCCTCGCAGAGGGCGTGGATAGAAAT	ACCTCATAGCCTTTGCCAAGCGTCGCGTCGCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGGTCAAACTTGAGGCCGTCCCGGTAGCCCTTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGGTGCAGGCTCAACCACGGTGGGAGTGCTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGAGCTTTACAGCATCCCGGCATGAACGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTTGCGTTGTACCGCGCCGGTCCTGCGACGGCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGTGCGCTGCGCCGCTCCGGTGCAGGCAGGTCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACCCACGGACGGGAGCTCACATGGCAACCCTCAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGGCTGTTGTAGTCGCTGAATACGCCGCTCCGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TACTCTCGTCGTGGATGCAATACCTACAATTTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGCCTCGTCACGGGTCAGATGCGGATGCGGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGTACCCGTTAGCAAAGGCCACCAGGCCGTTAGT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATATTATCATTGATCGTATGAAGAGATCCAGAAATA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGACAACAGCATACTTTCGCACACCACGGCGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGTGGTGGCCTTGCCCATATCCAGTGCTGCTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGCTGGCCAGAGGGCAGCCATGCGCACTGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCAGACCGAAAGCATCCAACCAGTCGAAGAAGTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGACCTCGAAGCTGCAGGCAGTTTACCGCAAGTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGCTGTATTTACGGTTGGATAGCTGGCTGATTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGACGGCAAGACCCAGCGCGTGGATGACCTCTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGAGAAGCTGGGCATCAAGGATAAGTATACCGAT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTCGATCTTCTCGCGCAGATGGAACGGCTCATAGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGGCCAGCCTGACCCTCCAGACCCGCCGCAGAAC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGCAAGAAGTTTGGCTTCGCACTGGATGTTCTCAC
GTCGCCTTCCTCGCGGAGGGCGTGGATAGAAAT	ACCGCATAACCCCACTGGAAAACGCCATCACGCA
GTCGCCCTCCTCGCGGAGGGCGCAAGTAGAAATC

>CP026548|2|1|682179-685445|CRT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AATAATCCAGTGCTCATTTTTTGATCTCCTTCGGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATTCCATTTTACATTCCTATGCACTTAGGAGACCC
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AAGACAGTTGCAACGCGATTGATGCCGGAAGAAT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGATCTGGAAAACAATGTGTATGAGACGAACGA
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTGCGTCTGCGGCCGGAGCATACCGAAGCTCACGTG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CGCCTCCGGTGCGCTGTTGCCGTCGTACAGCGTCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TGCTCCGATTTAATGCACCGGACCGCATACCGG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	AGCCGCTCTATCGGGACGTTCCGCAGCCCGGACCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	ATAAGCAGCCTGCGGGTCAGGGAACAGACCGGGCG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCGCTACCAGTGGCACTAGGCATGGCAGTCAGGCT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TCTTGTGTCTCCTTCGATAACGCCCTTGCATCTGT
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	CTCAGTCGTACGGCTCAGTGAGCAAGAGCTGAG
GTCGCCCTCCTTGCGGAGGGCGTGGATAGAAAT	TTTTCCAGGCCGCACTCCACCATCTTGCTGCTGGCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACAAATGAAACGGGTAAAAAATTAGTTGGAAATG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AATCAGGATAACACCCTTGCAGACACGCTTATCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GACGAACGCAACGGCAATTTCGAGGAAGCAAAGGA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTCCTTGTCATGTAGCGCGTGATAAATCGCGTCC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCGTTCTTCCCGAAAGAAACGGCAGACCAGTTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCACCCGGCGGGCATAGGCCGCGCTGGCAAGAGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GTAAGAAGAAGCTCGGTGCAATCAAAATCGGAAAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGTCATCAGAGTAGCGGACGGCAAAGTAGCCGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCCAGCTCAGGCGCTCAGTGTTGATACCTGCAT
GTCGCCCTCCTCGCAGAGGGCGTGGATAGAAAT	ACCTCATAGCCTTTGCCAAGCGTCGCGTCGCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGGTCAAACTTGAGGCCGTCCCGGTAGCCCTTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGGTGCAGGCTCAACCACGGTGGGAGTGCTGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGCGAGCTTTACAGCATCCCGGCATGAACGCCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CTGCTGGCTCGGCTCAACGCCCAGCGGCATCCCA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTTGCGTTGTACCGCGCCGGTCCTGCGACGGCG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CCCCCAAGCGTGTGGTAGCTGCGATAGAGGTACT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGTGCGCTGCGCCGCTCCGGTGCAGGCAGGTCAA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACCCACGGACGGGAGCTCACATGGCAACCCTCAG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	AGGCTGTTGTAGTCGCTGAATACGCCGCTCCGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TACTCTCGTCGTGGATGCAATACCTACAATTTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGCCTCGTCACGGGTCAGATGCGGATGCGGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGTACCCGTTAGCAAAGGCCACCAGGCCGTTAGT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATATTATCATTGATCGTATGAAGAGATCCAGAAATA
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGACAACAGCATACTTTCGCACACCACGGCGG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGTGGTGGCCTTGCCCATATCCAGTGCTGCTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TCGCTGGCCAGAGGGCAGCCATGCGCACTGCATC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATCAGACCGAAAGCATCCAACCAGTCGAAGAAGTC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGACCTCGAAGCTGCAGGCAGTTTACCGCAAGTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ACGCTGTATTTACGGTTGGATAGCTGGCTGATTTG
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TGACGGCAAGACCCAGCGCGTGGATGACCTCTTT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	ATGAGAAGCTGGGCATCAAGGATAAGTATACCGAT
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	TTCGATCTTCTCGCGCAGATGGAACGGCTCATAGGC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	CGGCCAGCCTGACCCTCCAGACCCGCCGCAGAAC
GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT	GGCAAGAAGTTTGGCTTCGCACTGGATGTTCTCAC
GTCGCCTTCCTCGCGGAGGGCGTGGATAGAAAT	ACCGCATAACCCCACTGGAAAACGCCATCACGCA
GTCGCCCTCCTCGCGGAGGGCGCAAGTAGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
CP026548.1\|AXA83217.1\|681704_681995_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
CP026548.1\|AXA81333.1\|673026_673881_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
CP026548.1\|AXA81346.1\|691027_691477_+\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81335.1\|676649_677348_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
CP026548.1\|AXA81339.1\|680663_681695_+\|subtype-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
CP026548.1\|AXA81337.1\|679111_679996_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
CP026548.1\|AXA81345.1\|690038_690968_+\|chromosome-partitioning-protein-ParB	unknown	unknown	gnl\|CDD\|319264
CP026548.1\|AXA81341.1\|685809_686661_+\|8-oxoguanine-DNA-glycosylase	unknown	unknown	gnl\|CDD\|211589
CP026548.1\|AXA81338.1\|679995_680667_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|187768
CP026548.1\|AXA81336.1\|677344_679108_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
CP026548.1\|AXA81334.1\|674412_676572_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
CP026548.1\|AXA81340.1\|685626_685815_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81348.1\|692065_692530_+\|PcfB-family-protein	unknown	unknown	gnl\|CDD\|378920
CP026548.1\|AXA81331.1\|670610_671654_-\|[citrate-(pro-3S)-lyase]-ligase	unknown	unknown	gnl\|CDD\|225595
CP026548.1\|AXA81343.1\|687972_688254_+\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|378935
CP026548.1\|AXA83218.1\|689248_690082_+\|chromosome-partitioning-protein-ParA	unknown	unknown	gnl\|CDD\|379293
CP026548.1\|AXA81344.1\|688379_689249_+\|replication-initiator-A-domain-containing-protein	unknown	unknown	gnl\|CDD\|369151
CP026548.1\|AXA81332.1\|671646_673014_-\|triphosphoribosyl-dephospho-CoA-synthase-CitG	unknown	unknown	gnl\|CDD\|132169
CP026548.1\|AXA81347.1\|691603_692041_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378999
CP026548.1\|AXA81342.1\|687001_687538_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239489

Protein	Function_ID	Function_description	E-value
CP026548.1\|AXA83217.1\|681704_681995_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.66679e-33
CP026548.1\|AXA81333.1\|673026_673881_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.82931e-45
CP026548.1\|AXA81335.1\|676649_677348_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.46307e-88
CP026548.1\|AXA81339.1\|680663_681695_+\|subtype-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
CP026548.1\|AXA81337.1\|679111_679996_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.15649e-153
CP026548.1\|AXA81345.1\|690038_690968_+\|chromosome-partitioning-protein-ParB	gnl\|CDD\|319264	cd16407, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	4.87642e-50
CP026548.1\|AXA81341.1\|685809_686661_+\|8-oxoguanine-DNA-glycosylase	gnl\|CDD\|211589	TIGR00588, Includes:_DNA-apurinic_or_apyrimidinic_site_lyase, 8-oxoguanine DNA-glycosylase (ogg). All proteins in this family for which functions are known are 8-oxo-guanaine DNA glycosylases that function in base excision repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). This family is distantly realted to the Nth-MutY superfamily. [DNA metabolism, DNA replication, recombination, and repair].	4.51186e-36
CP026548.1\|AXA81338.1\|679995_680667_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	8.39891e-32
CP026548.1\|AXA81336.1\|677344_679108_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
CP026548.1\|AXA81334.1\|674412_676572_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.26464e-50
CP026548.1\|AXA81348.1\|692065_692530_+\|PcfB-family-protein	gnl\|CDD\|378920	pfam12687, DUF3801, Protein of unknown function (DUF3801). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 158 and 187 amino acids in length. This family includes the PcfB protein.	2.26511e-34
CP026548.1\|AXA81331.1\|670610_671654_-\|[citrate-(pro-3S)-lyase]-ligase	gnl\|CDD\|225595	COG3053, CitC, Citrate lyase synthetase [Energy production and conversion].	4.60667e-160
CP026548.1\|AXA81343.1\|687972_688254_+\|DNA-binding-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	4.75575e-05
CP026548.1\|AXA83218.1\|689248_690082_+\|chromosome-partitioning-protein-ParA	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	9.04296e-71
CP026548.1\|AXA81344.1\|688379_689249_+\|replication-initiator-A-domain-containing-protein	gnl\|CDD\|369151	pfam06970, RepA_N, Replication initiator protein A (RepA) N-terminus. This of family of predicted proteins represents the N-terminus (approximately 80 residues) of replication initiator protein A (RepA), a DNA replication initiator in plasmids. Most proteins in this family are bacterial, but archaeal and eukaryotic members are also included.	1.56908e-28
CP026548.1\|AXA81332.1\|671646_673014_-\|triphosphoribosyl-dephospho-CoA-synthase-CitG	gnl\|CDD\|132169	TIGR03125, citrate_citG, triphosphoribosyl-dephospho-CoA synthase CitG. Triphosphoribosyl-dephospho-CoA is transferred to, and becomes the prosthetic group of, the respective acyl carrier protein subunits of both citrate lyase and malonate decarboxylase. Members of this protein family are triphosphoribosyl-dephospho-CoA synthases specifically from citrate lyase systems. This protein sometimes occurs as a fusion protein with CitX, the phosphoribosyl-dephospho-CoA transferase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Energy metabolism, Fermentation].	4.11515e-98
CP026548.1\|AXA81347.1\|691603_692041_+\|hypothetical-protein	gnl\|CDD\|378999	pfam12957, DUF3846, Domain of unknown function (DUF3846). A family of uncharacterized proteins found by clustering human gut metagenomic sequences. This domain is found associated with an pfam07275 like domain. This suggests that this family may also be involved in evading host restriction.	6.86172e-37
CP026548.1\|AXA81342.1\|687001_687538_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239489	cd03395, PAP2_like_4, PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.32473e-29

>CP026548.1|AXA83217.1|681704_681995_+|CRISPR-associated-endonuclease-Cas2
MLVLITYDVHTETPAGRKRLRKVAKRCVDHGQRVQNSVFECLLDAAQYAVLKAELTSLIDPALDSLRFYQLGNNYKSKVEHIGVHPPFEQDGLLLF
>CP026548.1|AXA81339.1|680663_681695_+|subtype-I-C-CRISPR-associated-endonuclease-Cas1
MRKFLNTLYVLNKDAYLSLEGENIVLLCNKAEIGRVPLHTLEGIVCFSYPGASPALMGKCASLGVDLSFFSPQGRFLARAVGEERGNVLLRQTQYRIADSEAESCLYARNFILGKVYNARWVLERATRDHPQRVPVEQLKRTSAQLAAALPLIEQCDDLDQLRGLEGEAAQRYFDCFDSLILQQHDDFSFAGRSRRPPLDNTNALLSFAYSLLASDCTAALQSVGLDPYVGFLHRARPGRRSLALDLMEELRAVYADRFVLSCINQKILNPKHFQKQENGAVLLTDEGRRAFLGGWQTRKQETITHPFLNEKLPWGLVPYVQALLLARTLRGDMELYPPFFWK
>CP026548.1|AXA81338.1|679995_680667_+|CRISPR-associated-protein-Cas4
MGGADDWLPLSGIQHFCFCRRQWALIHLEQQWAENRRTVEGQLDHARCHDANQTERRGGLLITRGMQVVSRRLGLSGNCDVVEFRADPEGVSLQSTEGLWKPMPVEYKHGRAKASDADRLQLCAQAMALEEMLVCSIPEGALFYEETRRREVVPLTEELRQTTQKMADEMHAYFARGYTPKSKPGTHCNACSLKELCLPVLYQRADPKAYLRAHLDEMQEAAP
>CP026548.1|AXA81337.1|679111_679996_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSEPIKNRYDFVILFDVENGNPNGDPDAGNMPRIDPETGYGLVTDVCLKRKIRNYVETLKEDEKGYRIYIKDGVPLNRSDAEAISTLGIDPDLKAAKKADPDIDAKLRDYMCENYFDIRTFGAVMTTFVKGALNCGQVRGPVQLSFARSVDPIVPQEVTITRVAITTEADAEKKGTEMGRKHIVPYALYRAEGYVSANLARKTTGFSEDDLKLLWTAILNMFENDHSAARGKMAVRELIVFKHDSELGNAPAYKLFDSVTVQRKPDVDAARSYRDYTVTVADTLPEGVTCERLS
>CP026548.1|AXA81336.1|677344_679108_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILQALTAYYEQLLKQGKVEAPGWDSKFKVSYELRLGPDGQLLALNDLRQEVPKGKKTVIAPRELPVPHRVKRASGVAANFLCDNTSYLLGADEKGKPERSRQCFEACAALHHKVLDGVDSPAAKAILAFFDSWEPDTAPTHPLLAEQWADLNNNANLVFGYESPDGAHWLATTDDAIRAAWQSAFDTSDADAETARCLITGKEAGIARIHPAIKGVMGAQAAGAALVSFNAPAFCSYGHEQGANAPVSEYAAFAYTTALNLLLADRNCCQRIGDTTIVCWAENAAPAYSNAMLMFFCGGAEARGVSESDLAAALKALSQGRPVSFLDDKLDPNQNFYVLGISPNAARLSVRFFLRNSFGQFAKNLQDHADRLSITRPAFDKRENLSVWALAQETVNQKSRDKNPSPQLVGDLLRAILTGGPYPATLLNGVTLRIRAEREVTRGRASILKAYYLRNYPTELNKEVFTVSLNESSNVPYVLGRLFSVLETIQSVANPGINATIKDRYFNSACATPATAFPTLVKLAQKHLQKMSTPNEVHFSKQLTELMAQLPETGFPARLSLPEQGAFEIGYYHQTQKRYAKKNEEE
>CP026548.1|AXA81335.1|676649_677348_+|type-I-C-CRISPR-associated-protein-Cas5
MSMLIEVWGDYACFTRPEMKTERVSYDMITPSAARGLVEAIYWHPGLRYTVDRIYLLKPFGLDPEDEASTEEYTQRPIRFTNIRRNEVKSTLLSSAALSAAKGGTPPVLYTSEDIQQRAAMVLQDVHYVIECHFDLTDKAAPSDNPGKFQDILRRRLRKGQCYHQPCFGCREFPANFREWPGGSIPALKVTQDLGFMLHSLDYSDSANIRSQFFRAKLVDGVMECRDVEVFT
>CP026548.1|AXA81334.1|674412_676572_+|CRISPR-associated-helicase/endonuclease-Cas3
MEHSTRLAHISEDGTRTQTVYDHLAGTARLVGSFAAPFGAQSEAEFAAWLHDVGKYSDAFQLRLKGGPKVDHSTAGAQEAWVRQHLHTAFAVAGHHSGLPDGGSPADDPGDATLFGRSKKPVAPYDGWQEVTLPASTPPAWACADPLSLAFFTRMLYSCLVDADFIDTETFMDGKAAPRGSGTDIAALRDIVSAQAQRYLRAESPSPVSVQRNTVLRACLEKGAHGPQGLYTLTVPTGGGKTFASLAFALEHAAAQKMKRVIYVIPYMSIIDQTAAVFSGLLGAENVLADFSNAEYKTVEQDDLTPAQYRQMLASENWDAPVVVTTAVQFFESLYANRSSRCRKLHNIADSVIIFDEAQTLPGDYLAPCVSAIAQLIQHYHSTAVLCTATQPALEPLFRRFAPELHPQEITPDAARLYEVLRRTTLQDLGTLPQEEFAARLANHPQVLCVVNRRKTAQRLYAALPAEGSYCLTTLLCAADRRRQLDDIRQRLKEGLPCRVVSTSLIEAGVDVDFPVAYREQCGLDSLLQTAGRCNREGRRGAEESIVYRFRLDECSTPQMLRQNVSALDYTARHQDTLDTPRAIQLYFNELSDLRGPDAVDKHGILDAFLRGIRGCQFPFAQVAEEFRLIENAARTVYLPVGEGAALCEQLRSGHVTRTLLRKLGIYSVSCYKDQFDKLDAAGALELRPDGSAILTDTSCYSEKTGLAMDVETGIGLYF
>CP026548.1|AXA81333.1|673026_673881_-|LysR-family-transcriptional-regulator
MDEKDYELLHALDETRNITHAADKLYMTQSALSKRIKALEQELGVEIVLRSRQGIRFTPAGEQVLLHSAAAAREMEKMRRQLASIQGEACGTLRAGISVNFSYYRLPEVLTEYHKAYPKVRLDIATGHSRNIYQQMLDSSLDVAVLRGEYPWDGTQFLLSQENICLICSEENKDRPISDYLYIDHSSDATISAQMARWRYENGVTNDAGNFVVDNIMVCREMVERGLGWALMPEVALDNFKGYVKPCTFENGEPFVRRTYIFCQRDAAALPQVQLFMDMLKKHR
>CP026548.1|AXA81332.1|671646_673014_-|triphosphoribosyl-dephospho-CoA-synthase-CitG
METTVSLVQMLDARERRVQHQQELLAQYHKPLICFTMNICGPIKDSPLIRRGFARGRQLLRQQFLRAKLTPLYQDAVREVTGCEAFYVLDADPLTIKKFTTDIEDATPLGRLFDMDVIRPDGLKVDREELNLEGRRCLICGGPAKVCSSRRIHTVAELQEKTTEILTEARDAQDIADAARLAVRALLYEVTTTPKPGLVDRRNSGSHKDMDVFTFMDSAAALYPYFEDCARTGRETAEQPAPETFAALRPLGCEAEGEMLDATGGVNTHKGAVFSVGIVCAALGRLDRSLWAEAARVLAEVSAMTAGLTEKDFAGVTAENAATAGQKLYIQYGITGVRGQVEAGLPTVLNVGLPVLEEGLAKGYDFDRVGGGALLAILANSTDTNIIARSSRERQLALTEELKALLAQTPYPDKDALAALDDRFIAENLSPGGSADLLALTWLLHFATTEGNINE
>CP026548.1|AXA81331.1|670610_671654_-|[citrate-(pro-3S)-lyase]-ligase
MSEYTISQVYPTDKTVLAQIDTLLGQEGIRRDGNLDYICAMFDEEYNVIGTGSCFGNTLRCFAVSSAHQGEGLLNQIITHLIEVQCARGNMHLFLYTKVKSSKFFGDLGFYEIARVEDTLVFMENRRDGFGAYLRDLEKTRTEGKSAALVMNANPFTLGHQYLVEKAAAACDTLHLFVVSEDASLVPFAVRRKLVEAGVAHLPNVVLHDSGPYIISNATFPSYFLKDEAAVIDGHARLDLAVFTKIAAALNITARYVGEEPTSQVTGLYNQIMCEQLPKAGIECVVVPRKEANGKAISASTVRQCLQSGDWDTLETLLPKTSLDYFRSPEAEPVLARIRNAGNVVHY
>CP026548.1|AXA81340.1|685626_685815_-|hypothetical-protein
MHGKLLFGKIVAMPDSRWKLISIRTLCGEGNLDAEKTGVVVTISIYALGEEDVLVTPLRTAI
>CP026548.1|AXA81341.1|685809_686661_+|8-oxoguanine-DNA-glycosylase
MHTVPLTHQLVTIQDDFDLDKIIESGQCFRPQKLADGRYRFLSGGALLYLTPLGAGQYDAAWYGSDWECWANYFDLGRNYAALRCSLAGQSSYLDKSLEFGQGIRILHQDPWEMLITFLISQRKSIPAIRTAVERLARCCGEPLSAEGDEVFLFPTPQQLCGLSGAQLMGCGLGYRTRYIQNAAAQASSGTLDLGALAALPNDALFSRLLELDGVGKKVANCVCLFGYGRTAMAPIDVWIQRLIDEEFGGRDPFPSYGQQAGIVQQYLFYYKRSTRHSVAHKK
>CP026548.1|AXA81342.1|687001_687538_-|phosphatase-PAP2-family-protein
MNAELTFLQFLQSLHSPMLDGSMGFITRLGDFGILWVTLTALLLVFRKTRRVGCVLAAALLIDAVLCNLLLKPLVARVRPCDILTEVQLLIPHPDDFSFPSGHTAASFASVTALWLAGKKQWAMAALPVGVLIAFSRMYLCVHYPTDILGGVILGAACGWAGAWLVKKAERRMAIPRS
>CP026548.1|AXA81343.1|687972_688254_+|DNA-binding-protein
MFRRDAGQNAPLLRHKTKGKSRIMNQNQAKEYYKKLFVNYPDVLSVEEATTLLGFKSQTAIIRRIHQHRIRCLKVGRSFMIPKEYLIDYLLDS
>CP026548.1|AXA81344.1|688379_689249_+|replication-initiator-A-domain-containing-protein
MTLDYFYGQAGELFSFYRIPKALFQEPRFQSLSTDAKTLYGILLDRMSLSMKNGWLDEQNRVFIIFTIEDVKRALCCADNKVTKLLRELEKFGLIERKRRGLGKPSLVYVKNFSAESSKSIFQNRDFHDSGGFKNASQDPSKSRCNKTKENDTEMSETDPFYSEEADGMSKRTQLEEYFSQSLEIDLLLRLCPDDEDTIYQIVDLLVDTCATNRKLLRIAGDDKPAEVVRSRFMKLNADHIRFVLKCLAENSSPIRNMKQYLLASLYNAPTIMQLSYQNQTNHDLAMRR
>CP026548.1|AXA83218.1|689248_690082_+|chromosome-partitioning-protein-ParA
MKISKKATTVAIVNQKGGTGKTTTCENLGIGLAMEGKKVLLVDADPQGSLTISMGWQQPDELPTTLSTLMQKAINDQSIPPSEGVLHHAEGVDLIPANIELAGLEVSLVNCMNREKMLKQVLEGAKHEYDFILLDCTPSLGMLTVNALAAADTTLIPVQAQYLPVKGLEQLLQTVQKVRRQINTHLKIEGILLTMTDSLTTYDKQISNLIRQAYGGKIKVFEPTIPRSVRAAEISTTGESIFQYDPKGKVAEAYQSLTKEVLADAEKQLKRVAERGR
>CP026548.1|AXA81345.1|690038_690968_+|chromosome-partitioning-protein-ParB
MPKNSLNVSLKGADDIFSTEESRQEQQREQVQQIPIGELFPFKNHPFKVLDDEAMTRTVESIAQYGVLAPLIARPRPDGDGYEIISGHRRQYAAKLAGLDTLPVIVRQMSDDAAVILMVDSNLQREHILPSERALAYKMKLEAIKNQGARSDLTSAQVGRKLEAADIVGQEAGDSRNQVRRFIRLTNLIPELLDMVDEKKISFNPAVELSYLDESQQRDFLEAMDGTQNAPSVSQAQQLKKMAQCGEFTYEKAFDILGQEKKSEQDTVTIKNDILRKYFPRSYTPRQMEEKIIQLLDAWQKKQQRHNER
>CP026548.1|AXA81346.1|691027_691477_+|hypothetical-protein
MNNTIPFHSAPHAPQITVDVNILSMLKQAASCLTEMASENVYLAAIGPDMELTIIVEEDAPSILPCFDDDDALISVKGAPLFISYNPAQVLKLAGKRYLTGPVIFYRTDGHSTIVSLTVEDIYRFQTYLESHSTTLMADGQKLTCICID
>CP026548.1|AXA81347.1|691603_692041_+|hypothetical-protein
MRMAENTLSVLKIAPGQYPQQVEIDNNLKALQEAVGGTIAAVYPFADPVAIICNDDGKLMGLPLNRALRDENGQMYDAVAGDFLVVGLGEEDFASLTPELAQKYEQLFHQPEAFLKLGNRLLVLPVPDEPPAEKPRTKPPAEHDR
>CP026548.1|AXA81348.1|692065_692530_+|PcfB-family-protein
MAVQEEIEQKLFNIMISTTKLSARTVLRAVKAAFRLYHSKASQGKQSVRTLLRQNRGVSSVEISKTGIRGLERYAKKYGIDYAIRKDTSEVPPRYLVFFKAPDAEAFNSAFKEYSASLLNKDKRPSVLARLQELVQAAAELPGKVRHKEQERGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP026548_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026548_4

1068191-1068416

TypeIII

Consensus_repeat	Method
ATTGCAATTTATCCCCGCAAGGGGAC	CRISPRCasFinder

3 spacers

csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6

The CRISPR arrays of CP026548_4

>merge|CP026548|4|1068191-1068416|CRISPRCasFinder
AGTAAAACTACACCCCGCAAGGGGACGGAAACGATCCTTAATTTGACCAGTACCCCATTTTTTAGCGATTGCAATTTATCCCCACAAGGGGACGGAAACGCCTTAGTGCGGTAAAGAGTCTCCTCACAGTGGTATTGCAATTTATCCCCGCAAGGGGACGGAAACCGCGGGAGTGAAATCTCCATTTCAGAACCATGCAAATTGCAATTTATCCCCGCAAGGGGAC

>CP026548|4|4|1068191-1068416|CRISPRCasFinder
AGTAAAACTACACCCCGCAAGGGGAC	GGAAACGATCCTTAATTTGACCAGTACCCCATTTTTTAGCG
ATTGCAATTTATCCCCACAAGGGGAC	GGAAACGCCTTAGTGCGGTAAAGAGTCTCCTCACAGTGGT
ATTGCAATTTATCCCCGCAAGGGGAC	GGAAACCGCGGGAGTGAAATCTCCATTTCAGAACCATGCAA
ATTGCAATTTATCCCCGCAAGGGGAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026548.1\|AXA81693.1\|1068483_1069929_-\|hypothetical-protein	csx1	pfam09455_csx1_CAS-III	gnl\|CDD\|378186
CP026548.1\|AXA81683.1\|1055331_1056990_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
CP026548.1\|AXA81701.1\|1077972_1079049_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
CP026548.1\|AXA81686.1\|1058760_1060425_-\|acetolactate-synthase,-large-subunit,-biosynthetic-type	unknown	unknown	gnl\|CDD\|181458
CP026548.1\|AXA81698.1\|1075828_1076362_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
CP026548.1\|AXA81685.1\|1058181_1058745_-\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
CP026548.1\|AXA81687.1\|1061140_1062346_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|377544
CP026548.1\|AXA81696.1\|1071704_1071899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274783
CP026548.1\|AXA81690.1\|1063762_1064635_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379042
CP026548.1\|AXA81697.1\|1073346_1075845_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP026548.1\|AXA81694.1\|1069921_1070935_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81688.1\|1062360_1063059_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81702.1\|1079045_1079801_+\|hypothetical-protein	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|227838
CP026548.1\|AXA81684.1\|1057067_1058087_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
CP026548.1\|AXA81692.1\|1067020_1068112_+\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81695.1\|1070941_1071550_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378186
CP026548.1\|AXA81691.1\|1064753_1066682_-\|DNA/RNA-helicase	unknown	unknown	gnl\|CDD\|350790
CP026548.1\|AXA81700.1\|1076995_1077976_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|187794
CP026548.1\|AXA81699.1\|1076364_1077030_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP026548.1\|AXA81689.1\|1063300_1063756_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP026548.1\|AXA81693.1\|1068483_1069929_-\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.49768e-16
CP026548.1\|AXA81683.1\|1055331_1056990_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
CP026548.1\|AXA81701.1\|1077972_1079049_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.0944e-21
CP026548.1\|AXA81686.1\|1058760_1060425_-\|acetolactate-synthase,-large-subunit,-biosynthetic-type	gnl\|CDD\|181458	PRK08527, PRK08527, acetolactate synthase large subunit.	0
CP026548.1\|AXA81685.1\|1058181_1058745_-\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	2.61387e-66
CP026548.1\|AXA81687.1\|1061140_1062346_+\|AAA-family-ATPase	gnl\|CDD\|377544	pfam05673, DUF815, Protein of unknown function (DUF815). This family consists of several bacterial proteins of unknown function.	7.17969e-101
CP026548.1\|AXA81690.1\|1063762_1064635_-\|hypothetical-protein	gnl\|CDD\|379042	pfam13151, DUF3990, Protein of unknown function (DUF3990). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	1.29862e-35
CP026548.1\|AXA81697.1\|1073346_1075845_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
CP026548.1\|AXA81699.1\|1076364_1077030_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.81545e-75
CP026548.1\|AXA81702.1\|1079045_1079801_+\|hypothetical-protein	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.8543e-12
CP026548.1\|AXA81684.1\|1057067_1058087_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
CP026548.1\|AXA81698.1\|1075828_1076362_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	2.25867e-30
CP026548.1\|AXA81695.1\|1070941_1071550_-\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	0.00475703
CP026548.1\|AXA81691.1\|1064753_1066682_-\|DNA/RNA-helicase	gnl\|CDD\|350790	cd18032, DEXHc_RE_I_III_res, DEXH-box helicase domain of type III restriction enzyme res subunit. Members of this cd includes both type I and type III restriction enzymes. Both are hetero-oligomeric proteins. Type I REs are encoded by three closely linked genes: a specificity subunit (HsdS or S) for recognizing a DNA sequence, a methylation subunit (HsdM or M) for methylating the recognized target bases, and a restriction subunit (HsdR or R) for the translocation and random cleavage of non-methylated DNA. They show diverse catalytic activities, including methyltransferase (MTase), ATP hydrolase (ATPase), DNA translocation and restriction activities. These enzymes cut at a site that differs, and is a random distance (at least 1000 bp) away, from their recognition site. Cleavage at these random sites follows a process of DNA translocation, which shows that these enzymes are also molecular motors. The recognition site is asymmetrical and is composed of two specific portions: one containing 3-4 nucleotides, and another containing 4-5 nucleotides, separated by a non-specific spacer of about 6-8 nucleotides. Type III enzymes are composed of two subunits, Res and Mod. The Mod subunit recognizes the DNA sequence specific for the system and is a modification methyltransferase; as such, it is functionally equivalent to the M and S subunits of type I restriction endonucleases. Res is required for restriction, although it has no enzymatic activity on its own. Type III enzymes recognize short 5-6 bp-long asymmetric DNA sequences and cleave 25-27 bp downstream to leave short, single-stranded 5' protrusions. They require the presence of two inversely oriented unmethylated recognition sites for restriction to occur. These enzymes methylate only one strand of the DNA, at the N-6 position of adenosyl residues, so newly replicated DNA will have only one strand methylated, which is sufficient to protect against restriction. Both type I and type III REs are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.16717e-57
CP026548.1\|AXA81700.1\|1076995_1077976_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.7994e-42
CP026548.1\|AXA81696.1\|1071704_1071899_+\|hypothetical-protein	gnl\|CDD\|274783	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein. A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking].	7.90328e-05

>CP026548.1|AXA81692.1|1067020_1068112_+|hypothetical-protein
MDAESFAYIFASPNGEHQQDPLAKVKTAMLLIQKDSEARGYAPFIMRPSPLFTHGYFLLNSADAAAVNRICTGAATLQDEAAGVYDVDLARLWSSRWQNDFSFPQFKYLLYTHSDKLPLNAQLHLTPAMQLTLEWHANADARFSVLLRALKEIFFEAARSGQYLYDRDAAARLAQATGLSSTRATSAVRVVLAAVQSWQQHSSRLQRTRVLRCGTTQEGAEYSVVDPFISEFFHWLEQSFAVLHSGETCRYLPVNDSVQGSERLAPALGVLEELDLLHFALLGGSNSRLYLYVNQTQTLELADRGFYRNHLLERIAQRHTDAVRLMSWLFTSGFSSEQLWDRIEEYFLGLPIQGFDAPSAESR
>CP026548.1|AXA81691.1|1064753_1066682_-|DNA/RNA-helicase
MEPMKATSVNSRAEELFVQLFCEAFGPEKTENLQVQYPCVDIYGRHRYIDFALESPESKIAIEIDGETYHNPSKVSENKYADDLLKQNSLVYDNWKVYRWIYSQLEKQPEKVKDELITFLGTSPMFKAFEADLPVQMGQTIELRDYQQEATENLQKMREDGKTIALLYNATGVGKTITAATDAKAVGGRTLFLVNALKLASQAKETFAKVWPEATLGEYTGSQKDMTQTVIFATVQSISKDLEKFSPTDFDYLIVDECHHAAANTYQKIFTYFHPKFILGLTATPERSDGEDMLELFQNVAHKMDLKTAVERGVLVPIRCIRVKTNIDLTDVRINGIKYNSQDLESKLFIPERNQLIVDTYLKYVNGKKTVIFCASVDHAAEIAKYQPMAYVLAPENKRKLDQDMLFQGEKPEAWLDVPIDVSDYEIIDLFNWQNSVKDMISQIEFVRMVDVQSETVERYIKDGKVKPDLSIPFGDKRMFHYFREESIRNIAKQYGWDLIAPQNMADKFMKFIETMDMSYSYKPVLLKAIYEYMDSSGRVALPDVVDYFIDFYEDRKAHGMIAEKSTSIYQKGGYTRKDVEKNILSNPFKRFEDMRFLMRCKDVETIEVNPIIFRKLTREDWLHIVDVCDKSLEKYYLRLKK
>CP026548.1|AXA81690.1|1063762_1064635_-|hypothetical-protein
MNTVFEIRSALQWSQSKLADEIGVSFATVNRWENEKSTPNRLAQEKMLAICEENHITLAEIIHDAIIGDATEISAMHPNKMVLYHGSKSGIQGKIKPASRDRCDFGAGFYMGTDPLQPLTLICDYEQSVFYILSVDLHSLKTLDVPADIEWAMLVAYHRGRMEAARGTKFFQKYQELDKDYDMVIGSIANDRMFYVLDSFFEGTITDTALVKSLSALKLGRQYVAITQKACDAVKIEREVQLLWMERQALKKASEQNRSNGIAFANQICKEYRREGRFFDEILDGAKQRR
>CP026548.1|AXA81689.1|1063300_1063756_-|hypothetical-protein
MDLVQLKLCDIQGRLFELSLQAGYDSEDFMKRFMRSKVARDLDSEYNRMQWAGEEYLLEEFADECPQTQKGNARYDREVMYWTGYLYRYWHILTNEPSREIYAQAPSKTMNTNYLMFHTMAPELAIEDLKELHQQKKQSKKQKSRKPEQQI
>CP026548.1|AXA81688.1|1062360_1063059_-|hypothetical-protein
MEKLEAKLKAVDWAVRDVLVGTMRSLQQLDICRKDCFYYIPAERLQDGDFPVHYVALYQSQYVFGAQAGVRYYGEVMKCSAVRRSAITEVGPRRGTEENLYYRFDIREWKQLNRPIEAKETGFVRDFTNLFLLEHSVQTPELWLRTEEEYRLCSALKRAVWGDTINEPDNGLAFEFRGFTVSFAEGKIFVSDEDRAFARYEISHFLQDPGAVVRGIRRECLRRDSMRELSKI
>CP026548.1|AXA81687.1|1061140_1062346_+|AAA-family-ATPase
MNLTEWNARLHGLVIFRALLDDDVIAKFVDLTDRMAAAPQSTGAVCDAAASFEAALFEHTTNFGEYLSAAVLEAETVCVRQAAVSEVPPVLQTALDNELDFLQQLCSLTLDELLDAAGAADKLPFLPRWETKAIDLHAAYAQRMSEVGKKGYGMFAKHHVFTVENGQLVPVRYPDPQRLDELPGYEQEREKVIANTRALLAGMPANNVLLYGDAGTGKSSTVKAIANEFAADGLRLVEVKKNQLYQIPDLMDKLAANPLKFILFIDDLSFTANDDNFAALKAILEGSVGGRARNIAVYATSNRRHLIKETLSDRTGDDIHEADTRQELMSLSARFGLTVTFQRPEKARFEVILTELAKQHGIEMPHDELLTKAEAFAIRAGGRSPRVAKQFIEQCAAGVQK
>CP026548.1|AXA81686.1|1058760_1060425_-|acetolactate-synthase,-large-subunit,-biosynthetic-type
MQLNGSQIFVEVLCEQGVDTLFGYPGGAVLNLYDELYKNADRITHVLTAHEQGASHAADGYARATGRTGVVLATSGPGATNLVTGIATAYMDSVPMVAFTGNVTTEGLGKDGFQEAYIEGITMPITKHNFTVRRVEDLADTMRAAFRIAQSGRKGPVLVDIPKDVTAAVCEFTPKKPEPIRTVTTFNEEQVKWAAEIINGAQRPLVYFGGGVRSAASCQPLRDLLKKAEIPATYTLMAAGVVPYGDPMNIGMVGMHGCYTSNRAVADCDVLIAVGARFSDRVALNPKTFAKNATIIQIDIDASELGKNVDVDLAIVGDAAYVLNAMLPMIEDKKHPDWMKMIHEWQAQDYHPVSDASRLMPHQVIGEVCNQCGPEAVYVTDVGQHQMWAAQYIRHAKSRGFITSGGLGTMGFGYGAAIGAQMALGRDQRVVMFTGDGSFHMNLNEACTAVSYELPIITVIFNNQVLGMVRQWQTAFYGKRFSQTDPHRKTNFVKLAEGFGLKGYHCENLAQFQEAFADALKQKGPTWIECMIDKDEKVLPMIPGGGDINDIIMK
>CP026548.1|AXA81685.1|1058181_1058745_-|acetolactate-synthase-small-subunit
MESNQRRVISLLVDNQSGVLARVSNLFCRRGFNIDSLTVSATNDPTVSRITVSVSGTEKELQQLILQTERLEVTRQVFVLNESTALERELLLLKVMANVTNRAELREIAGIYKAKIIDLSPDSMVFELTGRPEKIDAFLKLMSDYQILEQCRTGVTALERGGMHQHMQKPAQEVREAQFPLPGTRCR
>CP026548.1|AXA81684.1|1057067_1058087_-|ketol-acid-reductoisomerase
MAIKKYYDSDCNLGVLDGKTVAVIGFGSQGHAHSENLAESGVNVVVGLRKGSAHWEKASEFAATHPNFKVMEVEEAAKAGDVVMMLVPDELCADIYNKQVAPYMTEGKALAFAHGFNIHFKTITAPKNVDVIMIAPKGPGHIVRRLYTEGEGCPSLICVEQDFTGKAKDIALAYASGIGAGRAGILETTFKEETETDLFGEQAVLCGGVCELIHAGFDTLVEAGYEPEMAYFETCHEMKLIVDLINEGGFSKMRYSISNTAEYGDYRTGKRLITAETRKEMKKVLTEIQDGTFASEFLTEMSPNGGRKVHFLAQRRMEAEHPIEKVGAELRGMMSWLKK
>CP026548.1|AXA81683.1|1055331_1056990_-|dihydroxy-acid-dehydratase
MRSDNVTKGSERAPNRSLFYALGYTPEELDRPLIGVVSAYSEIVPGHMNLDKIADAVKAGVQMAGGTPILIPAIGVCDGIAMGHVGMKYSLASRELICDSVETMLMAHQLDGLVLVPNCDKIVPGMVMAAVRMDVPAVVCSGGPMLAGTYGGEEVSLSKMFEAVGAYKAGMITDEQLEDCTCNCCPSCGSCSGMYTANSMNCLCEAIGIALPGNGTIPAVYSKRLLLAKHAGMAVMDMVKKGITARQIINERSIRNALTCDMALGCSTNTVLHLLAIAYEAGVPIDLKLFNEISAKTPNLCHLAPAGPTHMPDLYAAGGIPAVQAELAKKGLLDLDVPTVTGKTLGENIKGAHILNDKAIRPIDDPYSQTGGLQILWGNIAPDGCVVKRSAVAPEMQEHSGPARVFNSEETAIAAIYAGKIVPGDVVVIRYEGPKGGPGMREMLNPTSALAGMKLDKTVALITDGRFSGASRGAAIGHVSPEAASGGPIGLVEEGDTIHIDIPNASITLEVPDEVLAQRKAKYVAPEPNIKTGWLSRYARMVTSANLGAVLK
>CP026548.1|AXA81693.1|1068483_1069929_-|hypothetical-protein
MDKMGRDVLLLYMSPKNPNYKTQTNEGAVRYLIKEKETPDCILALCSETVRKKAVVEMPDGSTCTTLEYFRDALRRVGIPEERLVVIEVPDSMDDEKKQFQAISQLLEKINEGDTLSIDLSGGMRDTAMLLVTAARCMRDLRKVETRRVIYAELRGEEPVAHDRTQLYDLFDFVTAMDEFFSTGTAQKLKRYLWSEGEKDPVLHTLPTRINQFSEDLALCRVQKLNDDLNQIDQALKKTPKKSQNLTDLFFRLLKDRFSTEFAELLSSGEKALPALVSWCAGHGMYQQALTLLCEQMPEYVCQHIFVQPTPKGWEYLAAQMQNKGKPWVYPLFHFHFCRLTLMQKEYPYTTDLRLTLSRDDAEGNMLFGVANDAEMHDYLDMVLASGQLVIDPAIRPQLEQAALLYQRVMQYRNQINHASASDLGLQSERVLPLDTEHIKETLQKIAAYLHEIRPLKRNVPQGVKALPVTKTIPAGAVPNL
>CP026548.1|AXA81694.1|1069921_1070935_-|hypothetical-protein
MNDVKTWADIDASPLLQLPPEQRKKLHDANDERFRTFWAECFLTAQAPGRGEEAWNSVDFCKAFLDAFDFWEAKPGQTFSMYLRTAVRHAQAHDQQQEEMAVTGFGRETNRKIKKALEYMEKNGITESVLCRDPEKEQVIADIVGVGVKTLREALRNKQSVLSLDDTGGEDSALGDRVVSQEKSVEEKVEQSSEMLAWLHRGIGLMNLQQKEKYGKTAGPLWSSVLMGFLRNNDALPPAEDAPARLANCDDLRPLEQDNCLWDILLLHRYVEFTVQPPYAPKALECAALHALLDSERNPAQDKTVAEFLGVSRAAVSQRRKTWQQKLVQMKTEQEDG
>CP026548.1|AXA81695.1|1070941_1071550_-|hypothetical-protein
MLKTYITTVPLQGKLDPMLYQRDHAAPPTATCFPIVQVMRDTLEPGDTVQLLAIRQENADTARNYQRLLEELAQLGIAEDQVRQLHLPEDQRPETLIGLCRDLVDALPQVTRVYACITYGSKSIPVVTLTALTCAEATHTELEVGGVYYGEVKRENGRVLSARLYDMAALYQLAGLVGTMRDSKTAEQVFHQLIWMNEHRED
>CP026548.1|AXA81696.1|1071704_1071899_+|hypothetical-protein
MFELISTLGCAAAGAVAGAVKGASIGIAVGGPVGAIAGTIPCAIVGGVTGALAGNNVGHRIDKR
>CP026548.1|AXA81697.1|1073346_1075845_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MATKCVIIKPIPSISYKIDKHVFRLLCNSSTTRKGDGILNVLTLQSTYGGLLHDTGKAVYRAGGQRGSHSEQGYQFLHGVLPGAGWAPALDCVRYHHSAALRGAAKALPADSPAYIVYLADDLSAAADRREVEGESSSFRRDLPLDTVFTHLNGSHPGWMMPAQPQDGSLKLPRQQQPLSASVYADAVRKLSECLPDLQPQPEWINSLLGLLETQFSCFPSSTFTGESPDVSLFDHAKTTAAIAACISEYVQANNITDLRKALFEQEKDFCQKDVFLLYTADFSRIQKFLYTVHTENALRSLRSRSFFLELLMEHYLDELLAGCGVSRANLIYSGGGHCYVLLPNTAAVADTLTRWNRQFNRWLQQQFGTQLFLANAWTPCSGNDLTNTPAEKSPYKELFRRVNRLLEQHKFHRYTAEDLRQLNSTATYPDGRECKVCGTSANLKDDLCPWCKLFVDLSIKIQNTRVLVVSRQPSAADDCTLPALDGGSEYLSLTDQLSARKRLASGEPVARVYTKNAPFTGLTYSTNLYVGDYAASNSMEELAEQSEGVRRIAVCRMDVDNLGHAFISGFEQENEKDPVKRMHYVTLSRTSAFSRQMSLFFKCYINGILEGLQVSIVYAGGDDVFLVGSWNDVLEAAQRIQRNFTAFSCGALTLSAGIGIFDDHYPIRLSAEETAALEEAAKHLPGKNAVALFTPERKAVRDAKGNLLVQPEQGHIYAWDTFRTKVLTEKVGCLQSFFGKDNAEHGNALLYNLLALLREAENDRINLARYAYLLARLSPKKNAPDYKLYEQFSHSMMDWALDAVQRHQLITAIYIYVYQNRKGGDTDGRME
>CP026548.1|AXA81698.1|1075828_1076362_+|type-III-A-CRISPR-associated-protein-Csm2
MAGWNDNGRSYGGGGYNNSRSGYSNSYNGNRSGSGSYNNRSSYGQQKELPPEITPKKVPEDYVDEAERIMRSLMSQPKKVTTSKIRNLLSLVTDIYNTENIRTEEKLLPESIVKLNLMRVRVAYECGRDDTVKSFVAQTNLLEYLKGISTDRADLIRFAHYMEALVAFHRYFGGKEG
>CP026548.1|AXA81699.1|1076364_1077030_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYGKILIRCDLEVRTGMHIGGSSAFSAIGAVDSPVVRDPYTGYPIVPGSSLKGKLRTLLARSTCQDIENMPAFDKDDERILRLFGSSEPVRRSRLQFADAFLSNAKELSNVGVTEVKTENAISRANSVANPRQIERVIAGAKFGVSIVYDVTDPAQVEEDLSLLAKGMKLLQMDYLGGHGSRGSGRVSLKNFALEGYGAQVDLSHLKSLFDEVDSYELFSV
>CP026548.1|AXA81700.1|1076995_1077976_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MRWIVMNYFLFKLQFDTAVHFGGADSALSLYTSEETLRADTLFSALCHEALVQHGEESLEQLCAQVRQGKFLLSDTMPWYGETFYLPKPIAASESTEEVETTLRKKVKKLAWIPVLEFDRYARSLHEGHFTPDEQPESFGTHYEQTKAAVPMQGDTMPYQVGLFRFAPDCGLYFICGFTEDGQDEDLEYLLDWLGATGIGGKVSSGYGKFHVVAKIYLNEPFDEQTEWMYHALSAEHAPYLLLSTSLPQADELDSALKDASFQLVRRSGFMASDRVETPLKKKTQYALSAGSVLQNRYQGALYDVGLSDVHPVYRYSKPIFMGVTL
>CP026548.1|AXA81701.1|1077972_1079049_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MIQQDHLQIFDLTLNVWAPLFVGNGSSYTKKEYMYNTRNGKVSFLDEQKFFSFLVEHDLVDKYGQFMLSEQSNLWAFLTKDCGISDAELKTLTRYQIEVGDALDAEHSLKEIHAFQRDAQGHAYIPGSSIKGALRTAWLLSAVLADRSTGHSLVQNRRAAFPEETYVNQLHLHGSIASDAVNSIFRGIQVSDSLSISDNCMMLAGKTDSATDGGTHSINLCRECAAPGTAIRFKLTLDQSVLKGRITKDSLLESIQQFDAYYQQTYARHFTLPRGAVNLPQQPYLILGGGSGFFAKSLAYPYLGEKEGLRWTAEQMAQMFRRHKHERDAEKGISPHTMKYARFRGRLYPYGYCGVSIL
>CP026548.1|AXA81702.1|1079045_1079801_+|hypothetical-protein
MIQQIQLVLSPPNDVRIPQSWSYRLYGWLMSQISSEFGEQMHLQGEHPIAHFLCFSPEKQSLIWTVNLLNDAARQVVFPVLESAKEIPLHELTLPVSEVRTFPAISAEELIRSGRSRSETRAKIAFLSPCAFKQSGRYTIFPQETLLLQSLIAHWNAAFPEYALIDSDALQALQQGLHIVDYNLHTTRYLLKETRIPAFQGNVTIEARLAPPLLELWNALLSFASHGGVGIKTTLGMGGAATDFYKKTPVI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: CP026548_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP026548_5

1072542-1073222

TypeIII

Consensus_repeat	Method
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	PILER-CR
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	CRISPRCasFinder
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	CRT

10 spacers

csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6

The CRISPR arrays of CP026548_5

>merge|CP026548|5|1072542-1073222|PILER-CR,CRISPRCasFinder,CRT
ATTGCAGCTTATCCCCGCAAGGGGACGATAACGCGAGAGCATAGAAGATGAGCTGTCCGACCTCGATTGCAGCTTATCCCCGCAAGGGGACGATAACTCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAATATTGCAGTTTATCCCCGCAAGGGGACGATAACAGAACTGCAGTATGGATGTCGTTCACGCGGTAGATTGCAGCTTATCCCCGCAAGGGGACGATAACATCAAAGATCTTTCTAAACTCCTCGATATCGTAATTGCAGCTTATCCCCGCAAGGGGACGATAACGAGCAAGTGCTTTCTGTTCGTCGTAAGTCATCACATTGCAGCTTATCCCCGCAAGGGGACGATAACATCAAAGATCTTTCTAAACTCCTCGATATCGTAATTGCAGCTTATCCCTGCAAGGGGACGATAATTTCACTTTCTTGATCTGCTTCTTTTCGGCACGGATTGCAGCTTATCCCCGCAAAGGGACGATAACGTCACAGCTTGCTGCTTGTCCAGTTTGGCGTCCATTGCAGCTTATCCCCGCAAGGGGACGATAACGACCTTTGCCATTGCCTTCTTGTCCTTGCGGCTCATTGCAGCTTATCCCCGCAAGGGGGCGAAAACAAACTCCATTCTTATTTCAGATTAAATAAATAAGTACCATCCCCGTAAGGGGGCAAAAAC

>CP026548|5|2|1072542-1073162|PILER-CR
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GCGAGAGCATAGAAGATGAGCTGTCCGACCTCG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	TCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAAT
ATTGCAGTTTATCCCCGCAAGGGGACGATAAC	AGAACTGCAGTATGGATGTCGTTCACGCGGTAG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GAGCAAGTGCTTTCTGTTCGTCGTAAGTCATCAC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCTGCAAGGGGACGATAAT	TTCACTTTCTTGATCTGCTTCTTTTCGGCACGG
ATTGCAGCTTATCCCCGCAAAGGGACGATAAC	GTCACAGCTTGCTGCTTGTCCAGTTTGGCGTCC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GACCTTTGCCATTGCCTTCTTGTCCTTGCGGCTC
ATTGCAGCTTATCCCCGCAAGGGGGCGAAAAC

>CP026548|5|5|1072542-1073162|CRISPRCasFinder
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GCGAGAGCATAGAAGATGAGCTGTCCGACCTCG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	TCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAAT
ATTGCAGTTTATCCCCGCAAGGGGACGATAAC	AGAACTGCAGTATGGATGTCGTTCACGCGGTAG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GAGCAAGTGCTTTCTGTTCGTCGTAAGTCATCAC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCTGCAAGGGGACGATAAT	TTCACTTTCTTGATCTGCTTCTTTTCGGCACGG
ATTGCAGCTTATCCCCGCAAAGGGACGATAAC	GTCACAGCTTGCTGCTTGTCCAGTTTGGCGTCC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GACCTTTGCCATTGCCTTCTTGTCCTTGCGGCTC
ATTGCAGCTTATCCCCGCAAGGGGGCGAAAAC

>CP026548|5|2|1072542-1073222|CRT
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GCGAGAGCATAGAAGATGAGCTGTCCGACCTCG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	TCCCCGGTGCAGCCCCGGCGGATGGTCGGCAGAAT
ATTGCAGTTTATCCCCGCAAGGGGACGATAAC	AGAACTGCAGTATGGATGTCGTTCACGCGGTAG
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GAGCAAGTGCTTTCTGTTCGTCGTAAGTCATCAC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	ATCAAAGATCTTTCTAAACTCCTCGATATCGTA
ATTGCAGCTTATCCCTGCAAGGGGACGATAAT	TTCACTTTCTTGATCTGCTTCTTTTCGGCACGG
ATTGCAGCTTATCCCCGCAAAGGGACGATAAC	GTCACAGCTTGCTGCTTGTCCAGTTTGGCGTCC
ATTGCAGCTTATCCCCGCAAGGGGACGATAAC	GACCTTTGCCATTGCCTTCTTGTCCTTGCGGCTC
ATTGCAGCTTATCCCCGCAAGGGGGCGAAAAC	AAACTCCATTCTTATTTCAGATTAAATA
AATAAGTACCATCCCCGTAAGGGGGCAAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP026548.1\|AXA81693.1\|1068483_1069929_-\|hypothetical-protein	csx1	pfam09455_csx1_CAS-III	gnl\|CDD\|378186
CP026548.1\|AXA81697.1\|1073346_1075845_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
CP026548.1\|AXA81701.1\|1077972_1079049_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
CP026548.1\|AXA81698.1\|1075828_1076362_+\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
CP026548.1\|AXA81687.1\|1061140_1062346_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|377544
CP026548.1\|AXA81706.1\|1084800_1085001_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379084
CP026548.1\|AXA81689.1\|1063300_1063756_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81690.1\|1063762_1064635_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379042
CP026548.1\|AXA81694.1\|1069921_1070935_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81688.1\|1062360_1063059_-\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81702.1\|1079045_1079801_+\|hypothetical-protein	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl\|CDD\|227838
CP026548.1\|AXA81692.1\|1067020_1068112_+\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81703.1\|1080027_1083189_+\|NgoFVII-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|197297
CP026548.1\|AXA81695.1\|1070941_1071550_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378186
CP026548.1\|AXA81691.1\|1064753_1066682_-\|DNA/RNA-helicase	unknown	unknown	gnl\|CDD\|350790
CP026548.1\|AXA81700.1\|1076995_1077976_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	cd09663_csm4gr5_CAS-III-A	gnl\|CDD\|187794
CP026548.1\|AXA81699.1\|1076364_1077030_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
CP026548.1\|AXA81696.1\|1071704_1071899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274783
CP026548.1\|AXA81705.1\|1084497_1084734_+\|hypothetical-protein	unknown	unknown	unknown
CP026548.1\|AXA81704.1\|1083578_1083977_+\|8-oxo-dGTP-diphosphatase-MutT	unknown	unknown	gnl\|CDD\|239517

Protein	Function_ID	Function_description	E-value
CP026548.1\|AXA81693.1\|1068483_1069929_-\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	3.49768e-16
CP026548.1\|AXA81697.1\|1073346_1075845_+\|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	0
CP026548.1\|AXA81690.1\|1063762_1064635_-\|hypothetical-protein	gnl\|CDD\|379042	pfam13151, DUF3990, Protein of unknown function (DUF3990). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	1.29862e-35
CP026548.1\|AXA81704.1\|1083578_1083977_+\|8-oxo-dGTP-diphosphatase-MutT	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	1.25796e-52
CP026548.1\|AXA81687.1\|1061140_1062346_+\|AAA-family-ATPase	gnl\|CDD\|377544	pfam05673, DUF815, Protein of unknown function (DUF815). This family consists of several bacterial proteins of unknown function.	7.17969e-101
CP026548.1\|AXA81706.1\|1084800_1085001_+\|hypothetical-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	5.37469e-07
CP026548.1\|AXA81703.1\|1080027_1083189_+\|NgoFVII-family-restriction-endonuclease	gnl\|CDD\|197297	cd09203, PLDc_N_DEXD_b1, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. All members of this subfamily are uncharacterized. Other characterized members of the superfamily that have a related domain architecture ( containing a DEAD/DEAH box helicase domain), include the DNA/RNA helicase superfamily II (SF2) and Res-subunit of type III restriction endonucleases. In addition to the helicase-like region, members of this subfamily also contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in the N-terminal putative catalytic domain. The HKD motif characterizes the phospholipase D (PLD, EC 3.1.4.4) superfamily.	5.55325e-87
CP026548.1\|AXA81701.1\|1077972_1079049_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	2.0944e-21
CP026548.1\|AXA81699.1\|1076364_1077030_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.81545e-75
CP026548.1\|AXA81702.1\|1079045_1079801_+\|hypothetical-protein	gnl\|CDD\|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	9.8543e-12
CP026548.1\|AXA81698.1\|1075828_1076362_+\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	2.25867e-30
CP026548.1\|AXA81695.1\|1070941_1071550_-\|hypothetical-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	0.00475703
CP026548.1\|AXA81691.1\|1064753_1066682_-\|DNA/RNA-helicase	gnl\|CDD\|350790	cd18032, DEXHc_RE_I_III_res, DEXH-box helicase domain of type III restriction enzyme res subunit. Members of this cd includes both type I and type III restriction enzymes. Both are hetero-oligomeric proteins. Type I REs are encoded by three closely linked genes: a specificity subunit (HsdS or S) for recognizing a DNA sequence, a methylation subunit (HsdM or M) for methylating the recognized target bases, and a restriction subunit (HsdR or R) for the translocation and random cleavage of non-methylated DNA. They show diverse catalytic activities, including methyltransferase (MTase), ATP hydrolase (ATPase), DNA translocation and restriction activities. These enzymes cut at a site that differs, and is a random distance (at least 1000 bp) away, from their recognition site. Cleavage at these random sites follows a process of DNA translocation, which shows that these enzymes are also molecular motors. The recognition site is asymmetrical and is composed of two specific portions: one containing 3-4 nucleotides, and another containing 4-5 nucleotides, separated by a non-specific spacer of about 6-8 nucleotides. Type III enzymes are composed of two subunits, Res and Mod. The Mod subunit recognizes the DNA sequence specific for the system and is a modification methyltransferase; as such, it is functionally equivalent to the M and S subunits of type I restriction endonucleases. Res is required for restriction, although it has no enzymatic activity on its own. Type III enzymes recognize short 5-6 bp-long asymmetric DNA sequences and cleave 25-27 bp downstream to leave short, single-stranded 5' protrusions. They require the presence of two inversely oriented unmethylated recognition sites for restriction to occur. These enzymes methylate only one strand of the DNA, at the N-6 position of adenosyl residues, so newly replicated DNA will have only one strand methylated, which is sufficient to protect against restriction. Both type I and type III REs are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	8.16717e-57
CP026548.1\|AXA81700.1\|1076995_1077976_+\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.7994e-42
CP026548.1\|AXA81696.1\|1071704_1071899_+\|hypothetical-protein	gnl\|CDD\|274783	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein. A newly defined histidine kinase (TIGR03785) and response regulator (TIGR03787) gene pair occurs exclusively in Proteobacteria, mostly of marine origin, nearly all of which contain a subfamily 6 sortase (TIGR03784) and its single dedicated target protein (TIGR03788) adjacent to to the sortase. This protein family shows up in only in those species with the histidine kinase/response regulator gene pair, and often adjacent to that pair. It belongs to the pfam00691 domain family, which is the peptidoglycan-associated region of flagellar motor protein MotB, OmpA (whose N-terminal region forms an outer membrane beta barrel), and peptidoglycan-associated lipoprotein Pal. Its function is unknown. We assign the gene symbol pdsO, for Proteobacterial Dedicated Sortase system OmpA family protein. [Protein fate, Protein and peptide secretion and trafficking].	7.90328e-05

>CP026548.1|AXA81696.1|1071704_1071899_+|hypothetical-protein
MFELISTLGCAAAGAVAGAVKGASIGIAVGGPVGAIAGTIPCAIVGGVTGALAGNNVGHRIDKR
>CP026548.1|AXA81695.1|1070941_1071550_-|hypothetical-protein
MLKTYITTVPLQGKLDPMLYQRDHAAPPTATCFPIVQVMRDTLEPGDTVQLLAIRQENADTARNYQRLLEELAQLGIAEDQVRQLHLPEDQRPETLIGLCRDLVDALPQVTRVYACITYGSKSIPVVTLTALTCAEATHTELEVGGVYYGEVKRENGRVLSARLYDMAALYQLAGLVGTMRDSKTAEQVFHQLIWMNEHRED
>CP026548.1|AXA81694.1|1069921_1070935_-|hypothetical-protein
MNDVKTWADIDASPLLQLPPEQRKKLHDANDERFRTFWAECFLTAQAPGRGEEAWNSVDFCKAFLDAFDFWEAKPGQTFSMYLRTAVRHAQAHDQQQEEMAVTGFGRETNRKIKKALEYMEKNGITESVLCRDPEKEQVIADIVGVGVKTLREALRNKQSVLSLDDTGGEDSALGDRVVSQEKSVEEKVEQSSEMLAWLHRGIGLMNLQQKEKYGKTAGPLWSSVLMGFLRNNDALPPAEDAPARLANCDDLRPLEQDNCLWDILLLHRYVEFTVQPPYAPKALECAALHALLDSERNPAQDKTVAEFLGVSRAAVSQRRKTWQQKLVQMKTEQEDG
>CP026548.1|AXA81693.1|1068483_1069929_-|hypothetical-protein
MDKMGRDVLLLYMSPKNPNYKTQTNEGAVRYLIKEKETPDCILALCSETVRKKAVVEMPDGSTCTTLEYFRDALRRVGIPEERLVVIEVPDSMDDEKKQFQAISQLLEKINEGDTLSIDLSGGMRDTAMLLVTAARCMRDLRKVETRRVIYAELRGEEPVAHDRTQLYDLFDFVTAMDEFFSTGTAQKLKRYLWSEGEKDPVLHTLPTRINQFSEDLALCRVQKLNDDLNQIDQALKKTPKKSQNLTDLFFRLLKDRFSTEFAELLSSGEKALPALVSWCAGHGMYQQALTLLCEQMPEYVCQHIFVQPTPKGWEYLAAQMQNKGKPWVYPLFHFHFCRLTLMQKEYPYTTDLRLTLSRDDAEGNMLFGVANDAEMHDYLDMVLASGQLVIDPAIRPQLEQAALLYQRVMQYRNQINHASASDLGLQSERVLPLDTEHIKETLQKIAAYLHEIRPLKRNVPQGVKALPVTKTIPAGAVPNL
>CP026548.1|AXA81692.1|1067020_1068112_+|hypothetical-protein
MDAESFAYIFASPNGEHQQDPLAKVKTAMLLIQKDSEARGYAPFIMRPSPLFTHGYFLLNSADAAAVNRICTGAATLQDEAAGVYDVDLARLWSSRWQNDFSFPQFKYLLYTHSDKLPLNAQLHLTPAMQLTLEWHANADARFSVLLRALKEIFFEAARSGQYLYDRDAAARLAQATGLSSTRATSAVRVVLAAVQSWQQHSSRLQRTRVLRCGTTQEGAEYSVVDPFISEFFHWLEQSFAVLHSGETCRYLPVNDSVQGSERLAPALGVLEELDLLHFALLGGSNSRLYLYVNQTQTLELADRGFYRNHLLERIAQRHTDAVRLMSWLFTSGFSSEQLWDRIEEYFLGLPIQGFDAPSAESR
>CP026548.1|AXA81691.1|1064753_1066682_-|DNA/RNA-helicase
MEPMKATSVNSRAEELFVQLFCEAFGPEKTENLQVQYPCVDIYGRHRYIDFALESPESKIAIEIDGETYHNPSKVSENKYADDLLKQNSLVYDNWKVYRWIYSQLEKQPEKVKDELITFLGTSPMFKAFEADLPVQMGQTIELRDYQQEATENLQKMREDGKTIALLYNATGVGKTITAATDAKAVGGRTLFLVNALKLASQAKETFAKVWPEATLGEYTGSQKDMTQTVIFATVQSISKDLEKFSPTDFDYLIVDECHHAAANTYQKIFTYFHPKFILGLTATPERSDGEDMLELFQNVAHKMDLKTAVERGVLVPIRCIRVKTNIDLTDVRINGIKYNSQDLESKLFIPERNQLIVDTYLKYVNGKKTVIFCASVDHAAEIAKYQPMAYVLAPENKRKLDQDMLFQGEKPEAWLDVPIDVSDYEIIDLFNWQNSVKDMISQIEFVRMVDVQSETVERYIKDGKVKPDLSIPFGDKRMFHYFREESIRNIAKQYGWDLIAPQNMADKFMKFIETMDMSYSYKPVLLKAIYEYMDSSGRVALPDVVDYFIDFYEDRKAHGMIAEKSTSIYQKGGYTRKDVEKNILSNPFKRFEDMRFLMRCKDVETIEVNPIIFRKLTREDWLHIVDVCDKSLEKYYLRLKK
>CP026548.1|AXA81690.1|1063762_1064635_-|hypothetical-protein
MNTVFEIRSALQWSQSKLADEIGVSFATVNRWENEKSTPNRLAQEKMLAICEENHITLAEIIHDAIIGDATEISAMHPNKMVLYHGSKSGIQGKIKPASRDRCDFGAGFYMGTDPLQPLTLICDYEQSVFYILSVDLHSLKTLDVPADIEWAMLVAYHRGRMEAARGTKFFQKYQELDKDYDMVIGSIANDRMFYVLDSFFEGTITDTALVKSLSALKLGRQYVAITQKACDAVKIEREVQLLWMERQALKKASEQNRSNGIAFANQICKEYRREGRFFDEILDGAKQRR
>CP026548.1|AXA81689.1|1063300_1063756_-|hypothetical-protein
MDLVQLKLCDIQGRLFELSLQAGYDSEDFMKRFMRSKVARDLDSEYNRMQWAGEEYLLEEFADECPQTQKGNARYDREVMYWTGYLYRYWHILTNEPSREIYAQAPSKTMNTNYLMFHTMAPELAIEDLKELHQQKKQSKKQKSRKPEQQI
>CP026548.1|AXA81688.1|1062360_1063059_-|hypothetical-protein
MEKLEAKLKAVDWAVRDVLVGTMRSLQQLDICRKDCFYYIPAERLQDGDFPVHYVALYQSQYVFGAQAGVRYYGEVMKCSAVRRSAITEVGPRRGTEENLYYRFDIREWKQLNRPIEAKETGFVRDFTNLFLLEHSVQTPELWLRTEEEYRLCSALKRAVWGDTINEPDNGLAFEFRGFTVSFAEGKIFVSDEDRAFARYEISHFLQDPGAVVRGIRRECLRRDSMRELSKI
>CP026548.1|AXA81687.1|1061140_1062346_+|AAA-family-ATPase
MNLTEWNARLHGLVIFRALLDDDVIAKFVDLTDRMAAAPQSTGAVCDAAASFEAALFEHTTNFGEYLSAAVLEAETVCVRQAAVSEVPPVLQTALDNELDFLQQLCSLTLDELLDAAGAADKLPFLPRWETKAIDLHAAYAQRMSEVGKKGYGMFAKHHVFTVENGQLVPVRYPDPQRLDELPGYEQEREKVIANTRALLAGMPANNVLLYGDAGTGKSSTVKAIANEFAADGLRLVEVKKNQLYQIPDLMDKLAANPLKFILFIDDLSFTANDDNFAALKAILEGSVGGRARNIAVYATSNRRHLIKETLSDRTGDDIHEADTRQELMSLSARFGLTVTFQRPEKARFEVILTELAKQHGIEMPHDELLTKAEAFAIRAGGRSPRVAKQFIEQCAAGVQK
>CP026548.1|AXA81697.1|1073346_1075845_+|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MATKCVIIKPIPSISYKIDKHVFRLLCNSSTTRKGDGILNVLTLQSTYGGLLHDTGKAVYRAGGQRGSHSEQGYQFLHGVLPGAGWAPALDCVRYHHSAALRGAAKALPADSPAYIVYLADDLSAAADRREVEGESSSFRRDLPLDTVFTHLNGSHPGWMMPAQPQDGSLKLPRQQQPLSASVYADAVRKLSECLPDLQPQPEWINSLLGLLETQFSCFPSSTFTGESPDVSLFDHAKTTAAIAACISEYVQANNITDLRKALFEQEKDFCQKDVFLLYTADFSRIQKFLYTVHTENALRSLRSRSFFLELLMEHYLDELLAGCGVSRANLIYSGGGHCYVLLPNTAAVADTLTRWNRQFNRWLQQQFGTQLFLANAWTPCSGNDLTNTPAEKSPYKELFRRVNRLLEQHKFHRYTAEDLRQLNSTATYPDGRECKVCGTSANLKDDLCPWCKLFVDLSIKIQNTRVLVVSRQPSAADDCTLPALDGGSEYLSLTDQLSARKRLASGEPVARVYTKNAPFTGLTYSTNLYVGDYAASNSMEELAEQSEGVRRIAVCRMDVDNLGHAFISGFEQENEKDPVKRMHYVTLSRTSAFSRQMSLFFKCYINGILEGLQVSIVYAGGDDVFLVGSWNDVLEAAQRIQRNFTAFSCGALTLSAGIGIFDDHYPIRLSAEETAALEEAAKHLPGKNAVALFTPERKAVRDAKGNLLVQPEQGHIYAWDTFRTKVLTEKVGCLQSFFGKDNAEHGNALLYNLLALLREAENDRINLARYAYLLARLSPKKNAPDYKLYEQFSHSMMDWALDAVQRHQLITAIYIYVYQNRKGGDTDGRME
>CP026548.1|AXA81698.1|1075828_1076362_+|type-III-A-CRISPR-associated-protein-Csm2
MAGWNDNGRSYGGGGYNNSRSGYSNSYNGNRSGSGSYNNRSSYGQQKELPPEITPKKVPEDYVDEAERIMRSLMSQPKKVTTSKIRNLLSLVTDIYNTENIRTEEKLLPESIVKLNLMRVRVAYECGRDDTVKSFVAQTNLLEYLKGISTDRADLIRFAHYMEALVAFHRYFGGKEG
>CP026548.1|AXA81699.1|1076364_1077030_+|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MYGKILIRCDLEVRTGMHIGGSSAFSAIGAVDSPVVRDPYTGYPIVPGSSLKGKLRTLLARSTCQDIENMPAFDKDDERILRLFGSSEPVRRSRLQFADAFLSNAKELSNVGVTEVKTENAISRANSVANPRQIERVIAGAKFGVSIVYDVTDPAQVEEDLSLLAKGMKLLQMDYLGGHGSRGSGRVSLKNFALEGYGAQVDLSHLKSLFDEVDSYELFSV
>CP026548.1|AXA81700.1|1076995_1077976_+|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MRWIVMNYFLFKLQFDTAVHFGGADSALSLYTSEETLRADTLFSALCHEALVQHGEESLEQLCAQVRQGKFLLSDTMPWYGETFYLPKPIAASESTEEVETTLRKKVKKLAWIPVLEFDRYARSLHEGHFTPDEQPESFGTHYEQTKAAVPMQGDTMPYQVGLFRFAPDCGLYFICGFTEDGQDEDLEYLLDWLGATGIGGKVSSGYGKFHVVAKIYLNEPFDEQTEWMYHALSAEHAPYLLLSTSLPQADELDSALKDASFQLVRRSGFMASDRVETPLKKKTQYALSAGSVLQNRYQGALYDVGLSDVHPVYRYSKPIFMGVTL
>CP026548.1|AXA81701.1|1077972_1079049_+|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MIQQDHLQIFDLTLNVWAPLFVGNGSSYTKKEYMYNTRNGKVSFLDEQKFFSFLVEHDLVDKYGQFMLSEQSNLWAFLTKDCGISDAELKTLTRYQIEVGDALDAEHSLKEIHAFQRDAQGHAYIPGSSIKGALRTAWLLSAVLADRSTGHSLVQNRRAAFPEETYVNQLHLHGSIASDAVNSIFRGIQVSDSLSISDNCMMLAGKTDSATDGGTHSINLCRECAAPGTAIRFKLTLDQSVLKGRITKDSLLESIQQFDAYYQQTYARHFTLPRGAVNLPQQPYLILGGGSGFFAKSLAYPYLGEKEGLRWTAEQMAQMFRRHKHERDAEKGISPHTMKYARFRGRLYPYGYCGVSIL
>CP026548.1|AXA81702.1|1079045_1079801_+|hypothetical-protein
MIQQIQLVLSPPNDVRIPQSWSYRLYGWLMSQISSEFGEQMHLQGEHPIAHFLCFSPEKQSLIWTVNLLNDAARQVVFPVLESAKEIPLHELTLPVSEVRTFPAISAEELIRSGRSRSETRAKIAFLSPCAFKQSGRYTIFPQETLLLQSLIAHWNAAFPEYALIDSDALQALQQGLHIVDYNLHTTRYLLKETRIPAFQGNVTIEARLAPPLLELWNALLSFASHGGVGIKTTLGMGGAATDFYKKTPVI
>CP026548.1|AXA81703.1|1080027_1083189_+|NgoFVII-family-restriction-endonuclease
MLYPGLYEQVINNALNSELAKIPEARKSTAPIDTAEAAKVLAQYLTDVVQKGLENVQDNGGGIEAQIQLANQIVTTIQNTTQEADFAALGVDQRAEQLLALLQQNDPRLATTGKSAKDLDRPETSIAQSSLFTGAIHEPQMYTELKKEIVSADRIDMLVSFIKWSGLRLIMDELRQFAQSGGELRIITTSYMGATDVKAIEELRALPNTKIKVSYDTKRTRLHAKTYVFYRDTGFTTAYVGSSNLSNAAISSGLEWNVKVTRKDLPETIEKIAATFESYWNSSEFEYYDEGQRERLTRALKAEKYSETDHIGIYALDILPYSYQQEILDRLDAERTVRGYNRNLVVAATGTGKTVISALDYKRFCKQHPGQPCRLLFVAHREEILKQSLYTFRAVLKDANFGELYVGSHKADSIDHLFVSIQTFNSQELAAKTAADFYDYIVVDEFHHAAAPTYQKLLEYYQPKILMGLTATPERMDGKSVLDYFGGRIAAEIRLPEAIDRKLLCPFQYFGVTDAADLSSLKWRTGGYDKNELSNLYTLSGMVAERRADLVVNSILKYVTDIEEVKGLGFCVSISHAQFMARYFNTHGIPSMALTGDSPDEERNAAKQRLVSGELRFLFVVDIYNEGVDIPEVNTVLFLRPTESLTVFLQQLGRGLRLAENKDCLTVLDFIGQANKKYNFEEKFAALLSNTTRSVSRELKEGFVSAPKGCYIQLEKIAAKYVLDNISASYDRTSGLVARAAAFTEDTGLPLTLGNFLDYYHLDPRAIYSKKVCFSRLCIRAGAAPDFAEPLEETMTKALARFAVVDSRRWIRFLLGLLPKLDNTDFAALSPVEKRMLQMFYVTLWGKTAESWEDEEVLDNLYALSDSPVLLGELQALLQYQYDRIDFIDEPVDVGFDCPLDLHCTYTRDQLLVALDFLKPATVREGVKWLPEKQLDVFFVTLNKADKDYSPTTMYKDYSINESLLHWQSQSTTAENSATGQRYIHHREKGSRVLLFVREFKAEARFGGAGAYTYLGTVNYVKHEGSRPMNITWKLDRPIPAKFLKKTNKLIVG
>CP026548.1|AXA81704.1|1083578_1083977_+|8-oxo-dGTP-diphosphatase-MutT
MKMIRVVAAVICDDIQTKHKIYATARGYGEYKGGWEFPGGKIEPGETPQQALKREIREELDTEIAVGNLIDTIEYDYPAFHLSMDCFWCEVVSGELVLKEAEAARWLTKEELDSVPWLPADRILLAQIRPAL
>CP026548.1|AXA81705.1|1084497_1084734_+|hypothetical-protein
MVNKPQDFLTLTGAARRARSEGYDITHHSLRNLVAAGYISHVPNGSRIYIFYPNLVHFIQKGLTAEQSLDYQLSRTRN
>CP026548.1|AXA81706.1|1084800_1085001_+|hypothetical-protein
MFCENCGHQISDTAKFCSACGHPVGTAPSPGAVAPPAVPAKRESPRLKASSGNGSITKMSGTRRKP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP026548_2	2.18\|683360\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	683360-683393	34	MG711465	Faecalibacterium phage FP_Brigit, complete genome	33671-33704	0	1.0
CP026548_2	2.9\|682752\|35\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	682752-682786	35	MK415407	Phage FAKO27_000271F, complete genome	3381-3415	1	0.971
CP026548_2	2.11\|682888\|35\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	682888-682922	35	MK415407	Phage FAKO27_000271F, complete genome	1898-1932	1	0.971
CP026548_2	2.38\|684702\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684702-684735	34	NC_047910	Faecalibacterium phage FP_Epona, complete genome	31533-31566	1	0.971
CP026548_2	2.40\|684836\|35\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684836-684870	35	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	5859-5893	1	0.971
CP026548_2	2.27\|683964\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	683964-683997	34	NC_047914	Faecalibacterium phage FP_Taranis, complete genome	47552-47585	2	0.941
CP026548_2	2.23\|683699\|33\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	683699-683731	33	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	120544-120576	6	0.818
CP026548_5	5.5\|1072836\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	1072836-1072869	34	NZ_CP017759	Cupriavidus necator strain NH9 plasmid pENH92, complete sequence	170679-170712	6	0.824
CP026548_2	2.33\|684365\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684365-684398	34	MF351863	Synechococcus phage Bellamy, complete genome	54087-54120	7	0.794
CP026548_2	2.27\|683964\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	683964-683997	34	NZ_CP034087	Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence	308505-308538	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	AF083977	Bacteriophage Mu, complete genome	36109-36142	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	V01463	Bacteriophage Mu genome right end encoding the genes gin and mom	503-536	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	NC_013594	Escherichia phage D108, complete genome	36147-36180	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	KP010268	Enterobacteria phage SfMu, complete genome	36538-36571	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	LR595867	Escherichia virus Mu_3F6 genome assembly, chromosome: 1	36037-36070	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	MT374852	Yersinia phage vB_YpM_3, complete genome	35921-35954	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	MT374854	Yersinia phage vB_YpM_6, complete genome	2642-2675	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	MT374853	Yersinia phage vB_YpM_5, complete genome	4067-4100	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	MT374856	Yersinia phage vB_YpM_23, complete genome	1091-1124	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	MT591577	Yersinia phage vB_YpM_Tongde, complete genome	1076-1109	9	0.735
CP026548_2	2.48\|685379\|34\|CP026548\|CRISPRCasFinder,CRT	685379-685412	34	NC_000929	Enterobacteria phage Mu, complete genome	36109-36142	9	0.735
CP026548_5	5.1\|1072574\|33\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	1072574-1072606	33	MN694241	Marine virus AFVG_250M570, complete genome	34251-34283	9	0.727
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	558891-558924	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	538056-538089	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	500343-500376	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	447325-447358	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	538058-538091	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	387571-387604	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	456737-456770	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	446109-446142	10	0.706
CP026548_2	2.32\|684298\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	684298-684331	34	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	190246-190279	10	0.706
CP026548_2	2.46\|685244\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	685244-685277	34	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	56749-56782	10	0.706
CP026548_2	2.46\|685244\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	685244-685277	34	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	188339-188372	10	0.706
CP026548_2	2.46\|685244\|34\|CP026548\|PILER-CR,CRISPRCasFinder,CRT	685244-685277	34	NZ_CP016463	Bosea sp. RAC05 plasmid pBSY19_1, complete sequence	317644-317677	11	0.676

1. spacer 2.18|683360|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to MG711465 (Faecalibacterium phage FP_Brigit, complete genome) position: , mismatch: 0, identity: 1.0

ccgttcttcccgaaagaaacggcagaccagttgg	CRISPR spacer
ccgttcttcccgaaagaaacggcagaccagttgg	Protospacer
**********************************

2. spacer 2.9|682752|35|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to MK415407 (Phage FAKO27_000271F, complete genome) position: , mismatch: 1, identity: 0.971

ataagcagcctgcgggtcagggaacagaccgggcg	CRISPR spacer
gtaagcagcctgcgggtcagggaacagaccgggcg	Protospacer
.**********************************

3. spacer 2.11|682888|35|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to MK415407 (Phage FAKO27_000271F, complete genome) position: , mismatch: 1, identity: 0.971

tcttgtgtctccttcgataacgcccttgcatctgt	CRISPR spacer
ccttgtgtctccttcgataacgcccttgcatctgt	Protospacer
.**********************************

4. spacer 2.38|684702|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NC_047910 (Faecalibacterium phage FP_Epona, complete genome) position: , mismatch: 1, identity: 0.971

tcgtggtggccttgcccatatccagtgctgcttg	CRISPR spacer
tcgtggtggccttgcccatatccagtgccgcttg	Protospacer
****************************.*****

5. spacer 2.40|684836|35|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 1, identity: 0.971

atcagaccgaaagcatccaaccagtcgaagaagtc	CRISPR spacer
atcaggccgaaagcatccaaccagtcgaagaagtc	Protospacer
*****.*****************************

6. spacer 2.27|683964|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NC_047914 (Faecalibacterium phage FP_Taranis, complete genome) position: , mismatch: 2, identity: 0.941

ctgctggctcggctcaacgcccagcggcatccca	CRISPR spacer
ttgttggctcggctcaacgcccagcggcatccca	Protospacer
.**.******************************

7. spacer 2.23|683699|33|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 6, identity: 0.818

acctcatagcctttgccaagcgtcgcgtcgcaa	CRISPR spacer
agttcatagcctatgccaagcgtcgcggcacga	Protospacer
* .********* ************** *.*.*

8. spacer 5.5|1072836|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017759 (Cupriavidus necator strain NH9 plasmid pENH92, complete sequence) position: , mismatch: 6, identity: 0.824

gagcaagtgctttctgttcgtcgt--aagtcatcac	CRISPR spacer
gagcaagcgctttcagttcgtcgttcaggtcctc--	Protospacer
*******.****** *********  *.*** **

9. spacer 2.33|684365|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 7, identity: 0.794

tactctcgtcgtggatgcaatacctacaattttt	CRISPR spacer
tgctgctgtcgtggatgcaatacctacagtctta	Protospacer
*.** ..*********************.*.**

10. spacer 2.27|683964|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034087 (Methylocystis rosea strain GW6 plasmid pGW6_1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgctggctcggctcaacgcccagcggcatccca	CRISPR spacer
gtgctggttcggctcgacgcccagcgcgcgcgcg	Protospacer
 ******.*******.**********    * *.

11. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to AF083977 (Bacteriophage Mu, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

12. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to V01463 (Bacteriophage Mu genome right end encoding the genes gin and mom) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

13. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to NC_013594 (Escherichia phage D108, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

14. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to KP010268 (Enterobacteria phage SfMu, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

15. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to LR595867 (Escherichia virus Mu_3F6 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

16. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to MT374852 (Yersinia phage vB_YpM_3, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

17. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to MT374854 (Yersinia phage vB_YpM_6, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

18. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to MT374853 (Yersinia phage vB_YpM_5, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

19. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to MT374856 (Yersinia phage vB_YpM_23, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

20. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to MT591577 (Yersinia phage vB_YpM_Tongde, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

21. spacer 2.48|685379|34|CP026548|CRISPRCasFinder,CRT matches to NC_000929 (Enterobacteria phage Mu, complete genome) position: , mismatch: 9, identity: 0.735

accgcataaccccactggaaaacgccatcacgca	CRISPR spacer
agggcatatccccactggagaacgccaaccagat	Protospacer
*  ***** **********.******* *  *

22. spacer 5.1|1072574|33|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to MN694241 (Marine virus AFVG_250M570, complete genome) position: , mismatch: 9, identity: 0.727

gcgagagcatagaagatgagctgtccgacctcg	CRISPR spacer
tacccaacatagaagatgagctgtccaacctgt	Protospacer
     *.*******************.****

23. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

24. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

25. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

26. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

27. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

28. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
gtgcgccaacagtcgctgaattcgccgccccggc	Protospacer
. **  . ..*********** ******.*****

29. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

30. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

31. spacer 2.32|684298|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 10, identity: 0.706

aggctgttgtagtcgctgaatacgccgctccggc	CRISPR spacer
ctgcgccaacagtcgctgaattcgccgccccggc	Protospacer
  **  . ..*********** ******.*****

32. spacer 2.46|685244|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 10, identity: 0.706

cggccagcctgaccctccagacccgccgcagaac	CRISPR spacer
tggccagcctgacgctccaggcccgtcacgtcgt	Protospacer
.************ ******.****.*.*.  ..

33. spacer 2.46|685244|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 10, identity: 0.706

cggccagcctgaccctccagacccgccgcagaac	CRISPR spacer
tggccagcctgacgctccaggcccgtcacgtcgt	Protospacer
.************ ******.****.*.*.  ..

34. spacer 2.46|685244|34|CP026548|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 11, identity: 0.676

cggccagcctgaccctccagacccgccgcagaac	CRISPR spacer
ggatgagccggaccctccagacccgctgcctccg	Protospacer
 *.. **** ****************.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

733879 : 739759

Streptococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA81387.1\|733879_734686_+	XRE family transcriptional regulator	A0A0A8WIV9	Clostridium_phage	1.4e-07	40.8
AXA81388.1\|734804_735296_-	aminoglycoside adenylyltransferase	NA	NA	NA	NA
AXA81389.1\|735347_735725_-	TnpV protein	D0R0F4	Streptococcus_phage	5.0e-19	43.4
AXA81390.1\|735684_735957_-	XRE family transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	2.7e-11	46.4
AXA81391.1\|736236_737844_-	DUF4368 domain-containing protein	C7F8K5	Bacillus_phage	1.2e-24	25.5
AXA81392.1\|737978_738170_-	hypothetical protein	NA	NA	NA	NA
AXA81393.1\|738182_739022_-	ATP-binding protein	H7BWC4	unidentified_phage	4.3e-55	44.2
AXA81394.1\|739018_739759_-	replication protein	A0A1S5SFJ6	Streptococcus_phage	3.8e-39	55.6

DBSCAN-SWA_2

1898076 : 1906450

Staphylococcus_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA82399.1\|1898076_1899588_+\|tRNA	lysine--tRNA ligase	A0A2K9L3L6	Tupanvirus	3.5e-87	40.9
AXA82400.1\|1899928_1900378_-	protein tyrosine phosphatase	NA	NA	NA	NA
AXA82401.1\|1900374_1900791_-	DNA-binding response regulator	NA	NA	NA	NA
AXA82402.1\|1900811_1901288_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.7e-45	58.7
AXA82403.1\|1901309_1902506_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.7e-108	49.7
AXA83267.1\|1902518_1903145_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	6.3e-35	40.9
AXA82404.1\|1903123_1904248_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.4e-45	34.9
AXA82405.1\|1905130_1906450_+	DNA primase	A0A2H4JBE3	uncultured_Caudovirales_phage	2.5e-17	27.3

DBSCAN-SWA_3

2339029 : 2346989

Prochlorococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA82784.1\|2339029_2340043_-	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.7e-18	30.3
AXA82785.1\|2340039_2340309_-	hypothetical protein	NA	NA	NA	NA
AXA82786.1\|2340334_2340817_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AXA82787.1\|2341271_2341772_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.1e-17	39.0
AXA82788.1\|2341771_2343250_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.1e-57	32.7
AXA82789.1\|2343252_2344299_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.9e-66	43.4
AXA82790.1\|2344292_2344889_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.4e-23	34.6
AXA82791.1\|2344981_2345782_+	inosine monophosphate cyclohydrolase	NA	NA	NA	NA
AXA82792.1\|2345807_2346989_+	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase	Q58MG4	Prochlorococcus_phage	8.3e-12	50.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP026548

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection