CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP029556	Luteimonas sp. 83-4 chromosome, complete genome	1 crisprs	DinG,cas3,DEDDh,csa3,Cas9_archaeal,WYL	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP029556_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029556_1

2526265-2526362

Orphan

Consensus_repeat	Method
GCTCTAACCGTCTGAGCTACATAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029556_1

>merge|CP029556|1|2526265-2526362|CRISPRCasFinder
GCTCTAACCGTCTGAGCTACATAGCCAAATTTTCAGATTTCGTGTCTATGACCCCGACATTATGAGTGACGTGCTCTAACCGGCTGAGCTACATAGCC

>CP029556|1|1|2526265-2526362|CRISPRCasFinder
GCTCTAACCGTCTGAGCTACATAGCC	AAATTTTCAGATTTCGTGTCTATGACCCCGACATTATGAGTGACGT
GCTCTAACCGGCTGAGCTACATAGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP029556.1\|AXA85309.1\|2524763_2525993_-\|integrase	unknown	unknown	gnl\|CDD\|170049
CP029556.1\|AXA85311.1\|2528339_2529017_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184281
CP029556.1\|AXA85647.1\|2529049_2529424_+\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
CP029556.1\|AXA85305.1\|2516858_2518121_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379041
CP029556.1\|AXA85316.1\|2534182_2535460_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213747
CP029556.1\|AXA85307.1\|2521415_2521613_-\|hypothetical-protein	unknown	unknown	unknown
CP029556.1\|AXA85644.1\|2520198_2521289_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372671
CP029556.1\|AXA85648.1\|2530306_2530741_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378499
CP029556.1\|AXA85306.1\|2518849_2520073_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371695
CP029556.1\|AXA85312.1\|2530746_2531016_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377375
CP029556.1\|AXA85308.1\|2523186_2524286_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372671
CP029556.1\|AXA85314.1\|2531408_2533295_-\|glycerol-acyltransferase	unknown	unknown	gnl\|CDD\|235865
CP029556.1\|AXA85315.1\|2533594_2534137_+\|hypothetical-protein	unknown	unknown	unknown
CP029556.1\|AXA85313.1\|2531071_2531344_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377375
CP029556.1\|AXA85645.1\|2522178_2522403_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
CP029556.1\|AXA85303.1\|2513287_2514244_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274510
CP029556.1\|AXA85310.1\|2526521_2527121_+\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
CP029556.1\|AXA85304.1\|2514310_2515288_+\|endonuclease	unknown	unknown	gnl\|CDD\|227668
CP029556.1\|AXA85643.1\|2516298_2516802_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
CP029556.1\|AXA85646.1\|2527570_2528197_-\|DUF4126-domain-containing-protein	unknown	unknown	gnl\|CDD\|379253

Protein	Function_ID	Function_description	E-value
CP029556.1\|AXA85309.1\|2524763_2525993_-\|integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	3.10209e-58
CP029556.1\|AXA85311.1\|2528339_2529017_+\|hypothetical-protein	gnl\|CDD\|184281	PRK13729, PRK13729, conjugal transfer pilus assembly protein TraB; Provisional.	0.0065504
CP029556.1\|AXA85647.1\|2529049_2529424_+\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	1.83593e-71
CP029556.1\|AXA85305.1\|2516858_2518121_-\|hypothetical-protein	gnl\|CDD\|379041	pfam13148, DUF3987, Protein of unknown function (DUF3987). A family of uncharacterized proteins found by clustering human gut metagenomic sequences.	2.07484e-12
CP029556.1\|AXA85316.1\|2534182_2535460_+\|hypothetical-protein	gnl\|CDD\|213747	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme. Members of this protein family are the spore cortex-lytic enzyme SleB from Bacillus subtilis and other Gram-positive, endospore-forming bacterial species. This protein is stored in an inactive form in the spore and activated during germination. [Cellular processes, Sporulation and germination].	1.45744e-08
CP029556.1\|AXA85306.1\|2518849_2520073_+\|hypothetical-protein	gnl\|CDD\|371695	pfam11726, Inovirus_Gp2, Inovirus Gp2. Isoform G2P plays an essential role in viral DNA replication; it binds to the origin of replication and cleaves the dsDNA replicative form I (RFI) and becomes covalently bound to it via phosphotyrosine bond, generating the dsDNA replicative form II (RFII).	0.000817485
CP029556.1\|AXA85648.1\|2530306_2530741_-\|hypothetical-protein	gnl\|CDD\|378499	pfam10825, DUF2752, Protein of unknown function (DUF2752). This family is conserved in bacteria. Many members are annotated as being putative membrane proteins.	5.38807e-17
CP029556.1\|AXA85644.1\|2520198_2521289_+\|IS3-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	1.80323e-31
CP029556.1\|AXA85312.1\|2530746_2531016_-\|hypothetical-protein	gnl\|CDD\|377375	pfam04505, CD225, Interferon-induced transmembrane protein. This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.	8.34929e-20
CP029556.1\|AXA85308.1\|2523186_2524286_-\|IS3-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	1.92322e-29
CP029556.1\|AXA85314.1\|2531408_2533295_-\|glycerol-acyltransferase	gnl\|CDD\|235865	PRK06814, PRK06814, acyl-[ACP]--phospholipid O-acyltransferase.	2.68426e-148
CP029556.1\|AXA85313.1\|2531071_2531344_-\|hypothetical-protein	gnl\|CDD\|377375	pfam04505, CD225, Interferon-induced transmembrane protein. This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.	6.0614e-25
CP029556.1\|AXA85645.1\|2522178_2522403_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.09553e-10
CP029556.1\|AXA85303.1\|2513287_2514244_+\|hypothetical-protein	gnl\|CDD\|274510	TIGR03299, LGT_TIGR03299, phage/plasmid-like protein TIGR03299. Members of this uncharacterized protein family are found in various Mycobacterium phage genomes, in Streptomyces coelicolor plasmid SCP1, and in bacterial genomes near various markers that suggest lateral gene transfer. The function is unknown. [Mobile and extrachromosomal element functions, Other].	6.59782e-126
CP029556.1\|AXA85310.1\|2526521_2527121_+\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	4.14501e-90
CP029556.1\|AXA85304.1\|2514310_2515288_+\|endonuclease	gnl\|CDD\|227668	COG5377, COG5377, Phage-related protein, predicted endonuclease [DNA replication, recombination, and repair].	1.00158e-51
CP029556.1\|AXA85643.1\|2516298_2516802_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	1.5029e-62
CP029556.1\|AXA85646.1\|2527570_2528197_-\|DUF4126-domain-containing-protein	gnl\|CDD\|379253	pfam13548, DUF4126, Domain of unknown function (DUF4126).	2.48553e-42

>CP029556.1|AXA85309.1|2524763_2525993_-|integrase
MPLTEVVIRQAKPDAKTKRIYDTGGLYLEITPSGSKLWRWKFRFAGKERRLALGSYPATGLKDARQRRDEARSRLEAGIDPSAHRRAEKLTGSDRAANSFERIAREWLAVKEHEWTEKQFLKEQARIENHATPYIGGRPIADLGVMDIRPLIDRLVRANHLEQAHRLRFQLSRVFKFAIATERAARDPAADLSAVLPSRRKQRHPTITDPDTIGQLLRCIDGFEGSFPVACALKLAPLWFCRPGEIRMAEWSQINLDSEDPQYVVPPINRKLRRAAKESPDTPSHVIPLSRQAVEILRELHLVTGRGKYLFPGARDPRRNMSDGAINAAIARIGFKGKIVGHGFRHMASTLLREQGWSREAVEAQLSHEIGGTEGVYNLAKYLPERRNMMQAWADYLDELKNPQSSQNS
>CP029556.1|AXA85308.1|2523186_2524286_-|IS3-family-transposase
MKKRFTEEQIIGFLREAEAGLPVKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKELEAENTRLKKLLAEQMFENDVIKDALRKKLVTAPARRELVRHLVDKGLSERRSLAVVRMSASAYRYAPRPDRNVELRARILALARRHKRYGVGMIHLKLRQAGLLVNYKRVERLYQEAKLQVRRRKRKKVLPGERQPLIRPLAANQVWSMDFVFDRTAEGRVIKCLTIVDDATHEAIVIEVERAISGLGVTRVLDRLALTRGLPQVIRTDNGKEFCGKAMVTWAYERGVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFTHLLHARTVIGTWRREYNEDRPKKALGGLTPSAYAKQLASTTINPGL
>CP029556.1|AXA85645.1|2522178_2522403_-|AlpA-family-transcriptional-regulator
MTSLRIIPVSETAHRLKIGRSTLYNWLNPKSKSYNSLFPKPVRLGSSVGFIEHEIDQFILDLMSAREGSGVSGK
>CP029556.1|AXA85307.1|2521415_2521613_-|hypothetical-protein
MAFCAFCVVLEWWAGVAKLDTLDRIHPPPNSALITKMSGLNFCQSEIDAVRTILYWRPRKFKYDF
>CP029556.1|AXA85644.1|2520198_2521289_+|IS3-family-transposase
MKKRFSEEQIIGFLREADAGMPIKELCRRHGFSEASYYLWRSKFGGMTVSDAKRLKELEAENTRLKKLLAEQMFENDVIKDVLRKKFVTAPARRALVRDLVAKGLSERRALAAVRMSASALRYAPRPDGNVELRERIQALAQRHKRYGVGMIHLKLRQAGMLVNYKRVERLYQEARLQVRRRKRKKVPVGERQPLLRPTAANQVWSMDFVFDRTGEGCVLKCLTIVDDATHEAVAIEVERAISGQMLTRVLDRLALSRGLPRVIRTDNGKEFCGKAMVEWAHGRGVDLRLIEPGKPNQNAYVESFNGRLRDECLNEHWFTSLLQARTVIEIWRREYNEERPKKALGGLTPAAYAKQLAEAQLQ
>CP029556.1|AXA85306.1|2518849_2520073_+|hypothetical-protein
MESMVKKGRKMTLADSDTLTRHLIRYPNGTSDMVKEVGRVRRMHVFMKHMQEAVESVAKGGDDPFSNHIVGGQVVRRLTPQGRAFWRSVVHADSELLELCEGRRLNPWLRLGVHVARKWGPRLRGYTTHADTDALLVPGLPKLLARQFRLIRYVVSRKAFQDELKGLTRVARDMYASCAELMLKVLAVHSRLLSMRIDLYFEADAKLISESKAARLAIDKFVRELGRDNIIDDVLAYIVVREDGLDRCIHYHVWVAVDGHKHRDGFHLTEKLGKYWIDRCIGSPVLGSTKNCWERRAEYEHNSLGLLGPGDEEMLRGLRKAIAYMCKLGKMPHLYVKKNMGRNLRKSQPPRGQRGNPKRGAPRKAGNDVSVARRVLLGDLAALKHARREAELLPQDRRAAGVGAKAA
>CP029556.1|AXA85305.1|2516858_2518121_-|hypothetical-protein
MLLGLSALTISARDFAVTAPTDGEVISTQIYCMGIAEKQSGKGRAYKAIFKPILEFDLYIEELRGRGIANLPQDLSEVLVNEASWPAIFEALSGTSKQVALINLDAETFLKGSIMRNPGLVNEFFDSPSRMTKRLTSNKVLRALHPTLGICLLVQPVIYMDHLRRRGASEKAIGLMDRVIYGIAGPNTSRRPVEIQTPALSILHQVLLALLKRGLSRLLAGTYSREVLEFDETATSLWRQIASSLDSPFRQNPAPRVAEKSWRIASAIHVVAVTIERLRAGYRIDDPFPPITAYALESAWQIVVWSIGETNKVFQLMAEASQPTSKILTRRVDEAVAAHQLLRTYLGQCRTTILSMNQAQNVSGLSAHKFRFVVEHFTAAGLVHMTEDRDILFLPGFFHNPATPMPIPATYPAMALSQWI
>CP029556.1|AXA85643.1|2516298_2516802_+|DNA-repair-protein-RadC
MRPEASQGNRLYVRSELRRYRVANADEIIEAARAVAGQRMQRGESFTDPLASGRFFQDKLAGLEREVFAAVFLDKRHRLIEYVELFQGTVDGAEVHPREVVRKALRCNAAAVIVAHNHPSGHLEPSAADRAVTSRLKQALSLVDIRLLDHIIVGGLQAASLAARGWV
>CP029556.1|AXA85304.1|2514310_2515288_+|endonuclease
MKKNAALRLVDTRTLDRQQWLSVRQGGIGSSDAAAAVGLCPYKSQLELWMEKTGRTPAENAPPGMDDARYWGILLEPYVAVAYSQQTDRKVRKVNAVLQHPTCPHMLANIDREVVGCPDVQILECKTAGEWGSKLWRDGVPEYIQLQVQHQLAVTNQQAVDVAVLLCGQRLEIHRIERDEEVIARLMVLEARFWQYVTTDIEPPADGSESAGKALRQLYPGGGNTLDFCENRVLSDTFAELVVLKDELEVRGKHAERLKQTLQQAMGDAARAVFATGEVSFKRAQDGTGLDTKRLAQDHPELMAQYSVPKPGARRFLISAKADHS
>CP029556.1|AXA85303.1|2513287_2514244_+|hypothetical-protein
MHLVETMAYAGEKPWHGLGNKLTTLQPIDVWKRQAGMDWTIEESEVRYITGSQTVGAIHSFPEQKVLYRSDTKRPLAVVSKRFQVVQPEEVLEFYRDLTEDAGFELETAGVLREGRKFWALARTGQSTTLKGKDQVNGYLLLATACDGSLATTAQFTSVRVVCNNTLQIALGDNRGAVKVPHRSAFDAEAVKQQLGITVAPWAHFVAQMKDLVACPVDPDSVEGLLRRVLVYPGQSGKAPVVNELAVRSVRSLYEGGGRGAQLASSRGTAWGLLNSVTEYVDHHRRARSEDHRREAAWFGQGAQFKQRAWDELIQLTA
>CP029556.1|AXA85310.1|2526521_2527121_+|RNA-pyrophosphohydrolase
MIDPDGYRPNVGIVLMHPDGRVFWARRVRRDGWQFPQGGMNSDETPLEAMYRELREETGLLPEHVEVLGATPGWLRYRLPPRAIRHRDRLVCIGQKQVWFLLHLKGEEADVRLDLTDHPEFDHWRWVDFWYPVQNVVMFKRGVYSRALQHLAPLARGIAGPQAVPPPCREVRNFSAKRPRRRPPGGQRGSGGRPPTEGG
>CP029556.1|AXA85646.1|2527570_2528197_-|DUF4126-domain-containing-protein
MSQAHLFAIGVVLAWLAGIRVYLTVFGVGIAGAMGWIDLPQALAATESPWVLGVSGALALAEFFADKIPGVDSGWDLLHTLLRVPAGAFLAAAAMSPDGSLGPGVLATGAGVALTSHFLKSSSRAVLNTSPEPVTNWTASVGEDVMTVGGLALAFSHPWIALVIVVTATVLFAAFVWWVWRKVARGARRLLSPEPDATDPGTGLTPPR
>CP029556.1|AXA85311.1|2528339_2529017_+|hypothetical-protein
MNATNRKAGPARAWLPWVLAVLALALAGWGWLSAHGYRNQLLAARSTAAAGGAQAALQQQIATLRQSDQISRQAMLELQNTLTERDQQIAALRADLDFYERFVSPDVQRRGLSVHAAHVQPQAANVWRFELTLTQGREQAGESRGQARVAVEGSRAGKLERLDWAALRQAAEAPGIDYQLRYLQRVEGEFALPEGFVPTRLIVELRPAQGRPVEAAFNWKDIAGA
>CP029556.1|AXA85647.1|2529049_2529424_+|iron-sulfur-cluster-insertion-protein-ErpA
METQNETAAPGYQQLDAPLAFSTAAAAKVSELISEEGNADLKLRVYIQGGGCSGFQYGFEFDENQSEDDLAVVTDGVTLLVDPLSLQYLMGAVVDYTETLAGAQFSIRNPNAKTTCGCGSSFTV
>CP029556.1|AXA85648.1|2530306_2530741_-|hypothetical-protein
MPALPLRWRRAWPTALLGVGALAVGAVLLRFNPNAAGNPLPACPFHAVTGLYCPGCGSTRALHALVHGDVATALAMNPLLVISLPLLAWMALDAAGLRLPGATRMRAVIGNPKLWLVALCSYWLARNLPWPPFNWLAPGGFPGL
>CP029556.1|AXA85312.1|2530746_2531016_-|hypothetical-protein
MSHMPSPPVPNHLVWAILATVFCCLPFGIVSIVYASQVDGLRMSGNRLGAIEASEKARNWALAATFSPLVGLLLWVLFFGGLSALGIVL
>CP029556.1|AXA85313.1|2531071_2531344_-|hypothetical-protein
MANTQNIPNHLVWAILSTLFCCLPFGIVSIVYASKVDGLAMAGDIAGAQAASDDAKKWAMIAAGVSIGLMVLYILLVVVMGIGAGMSGQM
>CP029556.1|AXA85314.1|2531408_2533295_-|glycerol-acyltransferase
MAHNQFELLRQRRFLPFFIVQCLGAFNDNVYRQAIIALLFWLGVSTEERSTYTSLAPAIFILPYFLFSAHAGQIAEKLEKSRLIRITTTMEIAIMSLAAAGFAIKSMPLLLVALFATGVQSTLFGPVKYSILPGVLHKSELTGGNGLVEMGTSVSILSGMIVGGLVFTVAGAYGPYAAGALLVALAVLGNFTSRFIPPVAAGDPDLRIGWNPVTESLAAWRLARKQLAVRHAILGVSWFWFIGTLLTAQLPTYAEVNLGGRQELYIFALALFSIGTGVGSMLCEKLSGRRVELGLVPLGALGISVFLFDLYRARSGEAMLAGVSIAEFVHLPGTWRIMLDLVGVGLFAGFYVVPLFALIQGRSPSNEMSRVVAGMNIQNSLFIVAAAGLGIAVQRLLGWTIPQVFLALAIGNLVVTAWIFTIVPEFAMRFLAWLMTSALYRIRWRGVEENVPEEGAALIVCNHVSYMDALILSGVIKRPVRFVMYYKIFNIPVMSWIFRTANAIPIAGAREDAALMQRAFDEIDAALAAGEVVCIFPEGALTKDGDIAPFKSGVEKILERRPVPVVPMALRGMWASMWSRRDSRLGRMRVPRRFRAHVEVVADAPIDGHIASAAMLEDKVRALRGNAA
>CP029556.1|AXA85315.1|2533594_2534137_+|hypothetical-protein
MIRASANQFESTLEGLKISVKADHCVELASTFTQCAEGARITVTGVGQAKSFTFEVPELQFNPDSMLYRGALDGSYRAAGTTLIVGDMDLDGSEDFALRTGNAGGYGSPSYSIYLQQAGGHGFVYSPEFSELTEGSLGMFSVSADKIRVPRKSGCCEHWDDVFVVKGHQPVFVARAAPQE
>CP029556.1|AXA85316.1|2534182_2535460_+|hypothetical-protein
MDARQSSKLQQSRPAGAYGLTPQQSVDLIVRTALEYGISDQRQIAYMLASAQHESDQFRTAREYGGPRQAIVRGYGGGRNYFGRGYVQVTHDHRYAAMDRALELGGRVIANPDVVATDPHIGAQSLVVGMMRGLFTGKSLHSYVGGQQTDYVNARRTVNGTDKAALIAGYVLSWEKKLPSIVTRLEQEGLERRPMPGNTTLADGKIGPGDRGYEVQQLQVRLGELGLRGASGKRVTTDGVFSAETAHALKTFQARTGIGHDGVADAQTLMALGLEHLAPSRGLPQSVKSAASGFSPSDQRLQGKLDACVKALDHEAGKRWDESSGRVSAAAFLEAKRHGFSAQDDFRLVLSQRTETHREGDFVCLLRVGPSMSSDPAANRIRIAMNDALSNPSLPEMALSGVENGPQTQAVQASIQLNQTGVLKR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

504144 : 515219

Pseudomonas_phage(44.44%)

terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA83696.1\|504144_504870_+	hypothetical protein	A0A0S4L2W4	Pseudomonas_phage	4.4e-32	43.5
AXA83697.1\|504827_505256_-	hypothetical protein	NA	NA	NA	NA
AXA83698.1\|505320_505539_+	hypothetical protein	NA	NA	NA	NA
AXA83699.1\|505540_505771_+	conjugal transfer protein TraR	NA	NA	NA	NA
AXA83700.1\|505779_506022_+	hypothetical protein	NA	NA	NA	NA
AXA83701.1\|506018_506318_+	hypothetical protein	J9SNG3	Pseudomonas_phage	2.9e-14	44.2
AXA83702.1\|506322_506886_+\|terminase	small terminase subunit	J9SH37	Pseudomonas_phage	1.9e-22	43.3
AXA83703.1\|506885_508304_+	hypothetical protein	Q5ZQY5	Pseudomonas_phage	1.3e-200	74.6
AXA83704.1\|508303_509929_+	DUF935 domain-containing protein	A0A2H4JGA9	uncultured_Caudovirales_phage	1.6e-151	53.9
AXA83705.1\|509891_511148_+	hypothetical protein	A0A1B0T6H8	Thiobacimonas_phage	4.6e-45	42.9
AXA83706.1\|511248_511815_+	hypothetical protein	M4ST99	Rhodobacter_phage	3.4e-11	32.1
AXA83707.1\|512094_512799_+	hypothetical protein	NA	NA	NA	NA
AXA83708.1\|512936_513215_+	hypothetical protein	NA	NA	NA	NA
AXA83709.1\|513306_514308_+	hypothetical protein	A0A2H4J9A2	uncultured_Caudovirales_phage	3.9e-79	48.6
AXA83710.1\|514307_515219_+	hypothetical protein	A0SMP3	Pseudomonas_virus	8.7e-94	56.4

DBSCAN-SWA_2

772002 : 781478

Ectocarpus_siliculosus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA83919.1\|772002_774597_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.3e-105	34.1
AXA83920.1\|774668_775247_-	bacterioferritin	NA	NA	NA	NA
AXA85447.1\|775277_775757_-	peroxiredoxin	A0A1D8KSL1	Synechococcus_phage	3.8e-24	44.1
AXA83921.1\|775892_776807_+	cytochrome C biogenesis protein	Q8QNB4	Ectocarpus_siliculosus_virus	1.2e-10	46.9
AXA83922.1\|776820_777186_-	two-component system response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	1.5e-07	32.5
AXA83923.1\|777243_778236_-	oxidoreductase	NA	NA	NA	NA
AXA83924.1\|778232_778841_-	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	7.8e-06	25.6
AXA85448.1\|778860_779943_-	ionic transporter y4hA	NA	NA	NA	NA
AXA83925.1\|780044_781478_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	4.5e-36	26.1

DBSCAN-SWA_3

1416654 : 1497472

Streptococcus_phage(11.76%)

transposase,integrase

attL 1416472:1416519|attR 1507696:1507743

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1416472:1416519	attL	NA	NA	NA	NA
AXA84446.1\|1416654_1417809_+\|integrase	integrase	NA	NA	NA	NA
AXA84447.1\|1418641_1421026_+	hypothetical protein	A0A0M7RDT6	Lactobacillus_phage	1.7e-59	40.0
AXA84448.1\|1421995_1423372_+	DNA (cytosine-5-)-methyltransferase	Q6DMX0	Streptococcus_phage	1.8e-37	40.1
AXA84449.1\|1423368_1425270_+	hypothetical protein	NA	NA	NA	NA
AXA85518.1\|1425049_1428082_+	hypothetical protein	NA	NA	NA	NA
AXA84450.1\|1428078_1429155_+	hypothetical protein	NA	NA	NA	NA
AXA84451.1\|1429314_1430088_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	4.7e-32	34.4
AXA84452.1\|1430077_1431604_-\|transposase	IS21 family transposase	NA	NA	NA	NA
AXA84453.1\|1431924_1432152_-	hypothetical protein	NA	NA	NA	NA
AXA84454.1\|1433377_1434814_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
AXA84455.1\|1434899_1437482_-	DNA ligase D	A0A068CDF3	Rhizobium_phage	1.7e-38	33.0
AXA84456.1\|1437491_1437668_-	DUF3606 domain-containing protein	NA	NA	NA	NA
AXA84457.1\|1437692_1438616_-	Ku protein	NA	NA	NA	NA
AXA84458.1\|1441005_1441203_-	hypothetical protein	NA	NA	NA	NA
AXA84459.1\|1441417_1442026_-	hypothetical protein	NA	NA	NA	NA
AXA84460.1\|1442154_1442814_+	hypothetical protein	NA	NA	NA	NA
AXA84461.1\|1443085_1443370_+	hypothetical protein	NA	NA	NA	NA
AXA84462.1\|1444500_1445505_-	hypothetical protein	NA	NA	NA	NA
AXA85519.1\|1445544_1445808_+	hypothetical protein	NA	NA	NA	NA
AXA84463.1\|1446228_1446366_+	hypothetical protein	NA	NA	NA	NA
AXA84464.1\|1447344_1448499_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.4e-40	35.7
AXA84465.1\|1448373_1448757_-	hypothetical protein	U5P4I9	Shigella_phage	1.1e-13	51.2
AXA84466.1\|1448935_1449178_-	hypothetical protein	NA	NA	NA	NA
AXA84467.1\|1449174_1450149_-	hypothetical protein	NA	NA	NA	NA
AXA84468.1\|1450132_1450576_-	hypothetical protein	NA	NA	NA	NA
AXA84469.1\|1450568_1450799_-	hypothetical protein	NA	NA	NA	NA
AXA84470.1\|1450795_1451059_-	hypothetical protein	NA	NA	NA	NA
AXA85520.1\|1451298_1451673_+	DNA polymerase V	A0A218MND2	uncultured_virus	2.5e-15	38.4
AXA84471.1\|1451672_1452923_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.0e-84	42.5
AXA84472.1\|1452993_1453830_-	exonuclease	NA	NA	NA	NA
AXA84473.1\|1453826_1456223_-	helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.2e-09	31.8
AXA85521.1\|1456658_1458095_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
AXA85522.1\|1458200_1458911_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.4e-27	33.3
AXA84474.1\|1458925_1461583_-	histidine kinase	B5LWN0	Feldmannia_species_virus	2.3e-09	26.0
AXA85523.1\|1461605_1462193_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
AXA85524.1\|1462203_1464219_-	K(+)-transporting ATPase subunit B	E4ZFI9	Streptococcus_phage	7.0e-35	27.0
AXA84475.1\|1464260_1465994_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AXA84476.1\|1466004_1466097_-	potassium-transporting system small peptide KdpF	NA	NA	NA	NA
AXA84477.1\|1466113_1466836_-	hypothetical protein	NA	NA	NA	NA
AXA84478.1\|1468771_1468999_+	hypothetical protein	NA	NA	NA	NA
AXA84479.1\|1468995_1469298_-	transcriptional regulator	NA	NA	NA	NA
AXA84480.1\|1469441_1470266_+	hypothetical protein	NA	NA	NA	NA
AXA84481.1\|1470342_1470564_-	hypothetical protein	NA	NA	NA	NA
AXA84482.1\|1470590_1470791_-	hypothetical protein	NA	NA	NA	NA
AXA84483.1\|1471598_1472207_+	hypothetical protein	NA	NA	NA	NA
AXA84484.1\|1472304_1472616_+	hypothetical protein	NA	NA	NA	NA
AXA84485.1\|1472742_1473690_+	hypothetical protein	Q859H7	Micromonospora_phage	6.7e-12	29.0
AXA84486.1\|1473787_1475116_-	hypothetical protein	NA	NA	NA	NA
AXA84487.1\|1475393_1478096_-	helicase	A0A2K5B264	Erysipelothrix_phage	3.6e-204	42.8
AXA84488.1\|1478219_1479518_-	restriction endonuclease	NA	NA	NA	NA
AXA84489.1\|1479514_1482064_-	McrB	K4I1H4	Acidithiobacillus_phage	5.9e-31	41.4
AXA84490.1\|1482257_1484753_+	restriction endonuclease subunit M	A0A220A2U5	Liberibacter_phage	4.9e-70	35.8
AXA84491.1\|1484745_1486059_+	hypothetical protein	NA	NA	NA	NA
AXA84492.1\|1486058_1489403_+	restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.1e-69	26.3
AXA84493.1\|1489399_1490098_+	M48 family peptidase	NA	NA	NA	NA
AXA84494.1\|1492033_1492855_+	hypothetical protein	NA	NA	NA	NA
AXA84495.1\|1492851_1494138_+	hypothetical protein	NA	NA	NA	NA
AXA84496.1\|1494134_1494863_+	hydrolase TatD	NA	NA	NA	NA
AXA84497.1\|1495077_1495656_-	hypothetical protein	NA	NA	NA	NA
AXA84498.1\|1496035_1497472_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
1507696:1507743	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1738642 : 1747560

Escherichia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXA84704.1\|1738642_1739545_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.6e-23	34.2
AXA84705.1\|1739541_1740099_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.2e-40	48.9
AXA84706.1\|1740095_1740980_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	1.9e-93	56.4
AXA84707.1\|1740992_1742045_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.9e-84	47.1
AXA84708.1\|1742053_1743409_-	phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.7e-29	26.3
AXA84709.1\|1743424_1744399_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	1.0e-52	37.3
AXA84710.1\|1744406_1746107_-	hypothetical protein	A0A0P0C5Z9	Ostreococcus_mediterraneus_virus	2.4e-12	28.7
AXA84711.1\|1746081_1747560_-	hypothetical protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-14	28.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage