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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030108 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2, complete sequence 0 crisprs NA 0 0 0 0
CP030107 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence 1 crisprs NA 0 2 0 0
CP030109 Acinetobacter baumannii strain DA33382 plasmid pDA33382-85, complete sequence 0 crisprs NA 0 0 0 0
CP030106 Acinetobacter baumannii strain DA33382 chromosome, complete genome 0 crisprs DEDDh,csa3,cas3,WYL,cas6f,cas7f,cas5f,cas8f,cas3f,cas1 0 0 7 0

Results visualization

1. CP030107
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030107_1 359-483 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP030107_1 1.1|382|32|CP030107|CRISPRCasFinder 382-413 32 NZ_CP030107 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence 382-413 0 1.0
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP030107 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence 437-460 0 1.0
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP025885 Escherichia coli strain 503440 plasmid p503440_68, complete sequence 59591-59614 3 0.875
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP037863 Citrobacter sp. LY-1 plasmid unnamed2, complete sequence 79717-79740 3 0.875
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP012835 Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 plasmid pCFSAN001588_002, complete sequence 27552-27575 3 0.875
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP024882 Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence 20053-20076 3 0.875
CP030107_1 1.2|437|24|CP030107|CRISPRCasFinder 437-460 24 NZ_CP024977 Escherichia coli strain CV839-15 plasmid pCV839-15-p3, complete sequence 7765-7788 3 0.875
CP030107_1 1.1|382|32|CP030107|CRISPRCasFinder 382-413 32 NZ_CP030107 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence 360-391 5 0.844
CP030107_1 1.1|382|32|CP030107|CRISPRCasFinder 382-413 32 NZ_CP030107 Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence 415-446 7 0.781

1. spacer 1.1|382|32|CP030107|CRISPRCasFinder matches to NZ_CP030107 (Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence) position: , mismatch: 0, identity: 1.0

tatgtggacacttaccttgcaagattttttca	CRISPR spacer
tatgtggacacttaccttgcaagattttttca	Protospacer
********************************

2. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP030107 (Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtactgacaaaaaaaatattgtcc	CRISPR spacer
gtactgacaaaaaaaatattgtcc	Protospacer
************************

3. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP025885 (Escherichia coli strain 503440 plasmid p503440_68, complete sequence) position: , mismatch: 3, identity: 0.875

gtactgacaaaaaaaatattgtcc	CRISPR spacer
tttctgataaaaaaaatattgtcc	Protospacer
 * ****.****************

4. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP037863 (Citrobacter sp. LY-1 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

gtactgacaaaaaaaatattgtcc	CRISPR spacer
tttctgataaaaaaaatattgtcc	Protospacer
 * ****.****************

5. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP012835 (Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 plasmid pCFSAN001588_002, complete sequence) position: , mismatch: 3, identity: 0.875

gtactgacaaaaaaaatattgtcc	CRISPR spacer
tttctgataaaaaaaatattgtcc	Protospacer
 * ****.****************

6. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP024882 (Citrobacter freundii strain AR_0022 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 3, identity: 0.875

gtactgacaaaaaaaatattgtcc	CRISPR spacer
tttctgataaaaaaaatattgtcc	Protospacer
 * ****.****************

7. spacer 1.2|437|24|CP030107|CRISPRCasFinder matches to NZ_CP024977 (Escherichia coli strain CV839-15 plasmid pCV839-15-p3, complete sequence) position: , mismatch: 3, identity: 0.875

gtactgacaaaaaaaatattgtcc	CRISPR spacer
tttctgataaaaaaaatattgtcc	Protospacer
 * ****.****************

8. spacer 1.1|382|32|CP030107|CRISPRCasFinder matches to NZ_CP030107 (Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence) position: , mismatch: 5, identity: 0.844

tatgtggacacttaccttgcaagattttttca	CRISPR spacer
tatgtggacacttaccttgcaatatgtggaca	Protospacer
********************** ** *   **

9. spacer 1.1|382|32|CP030107|CRISPRCasFinder matches to NZ_CP030107 (Acinetobacter baumannii strain DA33382 plasmid pDA33382-2-2, complete sequence) position: , mismatch: 7, identity: 0.781

tatgtggacacttaccttgcaagattttttca	CRISPR spacer
tatgtggacacttaccttgcaagtactgacaa	Protospacer
***********************  .*  . *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP030106
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 122295 : 136881 25 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_2 273863 : 285533 14 Acinetobacter_phage(30.0%) head NA
DBSCAN-SWA_3 1441950 : 1462858 38 Acinetobacter_phage(42.11%) head,tail,integrase attL 1446818:1446833|attR 1468777:1468792
DBSCAN-SWA_4 1496128 : 1551765 62 Acinetobacter_phage(86.84%) transposase,terminase,head,capsid,tRNA,tail NA
DBSCAN-SWA_5 1555071 : 1680527 146 Acinetobacter_phage(80.43%) integrase,terminase,head,capsid,tRNA,tail attL 1563495:1563550|attR 1660410:1660465
DBSCAN-SWA_6 2269892 : 2333499 73 uncultured_Caudovirales_phage(28.57%) integrase,plate,terminase,portal,holin,capsid,tRNA,tail attL 2275423:2275438|attR 2322040:2322055
DBSCAN-SWA_7 3100146 : 3153103 55 Escherichia_phage(13.33%) integrase,transposase,tRNA attL 3103053:3103112|attR 3155356:3156175
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage