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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030787 Escherichia albertii strain 2013C-4143 chromosome, complete genome 5 crisprs NA 0 2 0 0

Results visualization

1. CP030787
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030787_1 729638-729749 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030787_2 1636074-1636156 Orphan I-F
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030787_3 1643788-1643936 Orphan I-F
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030787_4 3044669-3044787 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030787_5 3564465-3564597 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40387-40429 3 0.93
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386508-386550 4 0.907
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229392-229434 4 0.907
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239886-239928 4 0.907
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230798-230840 4 0.907
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211768-211810 4 0.907
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397094-397136 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404139-404181 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229089-229131 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229190-229232 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229291-229333 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239583-239625 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239684-239726 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239785-239827 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230495-230537 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230596-230638 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230697-230739 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211465-211507 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211566-211608 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211667-211709 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7442-7484 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84266-84308 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31299-31341 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30219-30261 5 0.884
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 11511-11553 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194009-194051 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194102-194144 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194288-194330 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211736-211778 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211936-211978 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204503-204545 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204596-204638 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204782-204824 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222230-222272 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222430-222472 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195337-195379 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195430-195472 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195616-195658 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213064-213106 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213264-213306 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176292-176334 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176385-176427 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176571-176613 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194019-194061 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194219-194261 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 8888-8930 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14105-14147 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51834-51876 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27288-27330 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27387-27429 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053046 Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence 58266-58308 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 19389-19431 6 0.86
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313592-313634 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194195-194237 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204689-204731 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195523-195565 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176478-176520 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 17905-17947 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40311-40353 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14196-14238 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 3468-3510 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 80320-80362 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 94-136 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 27994-28036 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 33065-33107 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 141016-141058 7 0.837
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MF374379 Escherichia phage DN1, complete genome 31158-31200 7 0.837
CP030787_3 3.1|1643816|32|CP030787|CRISPRCasFinder 1643816-1643847 32 MG945558 UNVERIFIED: Microviridae sp. isolate 3235-1801, complete genome 5971-6002 8 0.75
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 137979-138021 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 82842-82884 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 27027-27069 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3322-3364 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3321-3363 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3321-3363 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3321-3363 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 6859-6901 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56031-56073 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 114989-115031 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NC_049343 Escherichia phage 500465-2, complete genome 31803-31845 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18392-18434 8 0.814
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 102544-102586 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87179-87221 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12159-12201 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24780-24822 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 63889-63931 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 167181-167223 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 110192-110234 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 6900-6942 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198915-198957 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91424-91466 9 0.791
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 1-35 10 0.767
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 24893-24935 10 0.767
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27486-27528 10 0.767
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP019906 Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence 17877-17919 10 0.767
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 1-34 11 0.744
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 1-34 11 0.744
CP030787_4 4.1|3044707|43|CP030787|CRISPRCasFinder 3044707-3044749 43 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 1-34 11 0.744

1. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.93 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacggtttggt	Protospacer
*************************************.*.**

2. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 4, identity: 0.907 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga--	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
************************************  .*.**

3. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 4, identity: 0.907 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
************************************* * * .

4. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 4, identity: 0.907 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
************************************* * * .

5. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 4, identity: 0.907 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
************************************* * * .

6. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 4, identity: 0.907 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
************************************* * * .

7. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga---	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
***********************************.   .***

8. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
***********************************.*  ** .

9. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

10. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

11. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
***************.********************* * * .

12. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

13. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

14. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
***************.********************* * * .

15. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

16. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

17. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
***************.********************* * * .

18. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

19. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
***************.********************* * * .

20. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
***************.********************* * * .

21. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
***************.*********************.* .*

22. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
***************.*********************.* .*

23. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
***********************************. .* * *

24. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 5, identity: 0.884 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga--	CRISPR spacer
tgccggatgcggcgtaaacgccttatctggcctacg--ccagact	Protospacer
***************************.********  .*.**

25. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
***************.*******************..*  * *

26. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

27. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

28. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
***************.********************. * * .

29. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

30. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

31. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

32. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

33. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
***************.********************. * * .

34. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

35. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

36. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

37. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

38. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
***************.********************. * * .

39. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

40. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

41. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

42. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
***************.********************. * * .

43. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
***************.********************. * * .

44. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

45. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
***************.********************    * *

46. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacgatgtgcg	Protospacer
************************************.. .* .

47. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
***********************************. .. * *

48. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
***********************************.. *  *

49. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
.**************.********************* * .*

50. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
.**************.********************* * .*

51. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctac---ggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcatacattagccc---	Protospacer
******************************* ***   .**.*

52. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 6, identity: 0.86 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
************.**.********************* * *

53. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
***********************************..  . *

54. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
***************..*******************. * * .

55. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
***************..*******************. * * .

56. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
***************..*******************. * * .

57. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
***************..*******************. * * .

58. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcc---tacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggccacgaacaacac---	Protospacer
********************************    **..* *

59. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
***********************************..   * .

60. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
***************.*******************. .. * *

61. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga--	CRISPR spacer
ggccggatgcggcgtaaacgcattattcggcctacg--ccagact	Protospacer
 ******************** ****.*********  .*.**

62. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga--	CRISPR spacer
ggccggatgcggcgtaaacgcattattcggcctacg--ccagact	Protospacer
 ******************** ****.*********  .*.**

63. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
***********************************..    .*

64. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
***************.********************  .   *

65. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
***************.******* *************.  *

66. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
***************.******* *************.  *

67. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 7, identity: 0.837 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
***************.*******************.. .** .

68. spacer 3.1|1643816|32|CP030787|CRISPRCasFinder matches to MG945558 (UNVERIFIED: Microviridae sp. isolate 3235-1801, complete genome) position: , mismatch: 8, identity: 0.75 

tccaaaaccttgagaactgtaatgaaaggagg	CRISPR spacer
gctaaaaccttgagaactaaaatgaaagtttc	Protospacer
 *.***************. ********

69. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgctttatccggcctacattcgtgc	Protospacer
*********************.*************. ..  *

70. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
***************.*******************.. .*...

71. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
taccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
*.*************.*******************.. .** .

72. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccgtcctacaaaatcgt	Protospacer
***************************** *****..  . *

73. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccgtcctacaaaatcgt	Protospacer
***************************** *****..  . *

74. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccgtcctacaaaatcgt	Protospacer
***************************** *****..  . *

75. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccgtcctacaaaatcgt	Protospacer
***************************** *****..  . *

76. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
***************.*******************..  * .

77. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
***********************************..   . .

78. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgccttatccgtcctacaaagatgt	Protospacer
***************************** *****..    *

79. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
***************.*************.******  * . .

80. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.814 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga-	CRISPR spacer
tgccggatgcggcgtaaacgtcttatccggcct-tactgtggac	Protospacer
********************.************ .. . .***

81. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
***************.*******************..    .

82. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccgtcctacaatgcctg	Protospacer
***************.************* *****... *  .

83. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccggatgcggcgtggacgccttatccggcctacatacgggc	Protospacer
.**************..******************.  . **

84. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgtcggatgcggcgtaaacgccttatccgacctacaaaaatca	Protospacer
**.**************************.*****..     *

85. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
***************.*******************..  . .

86. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccggatgcggcgtaagcgccttatccggcctacaagaacgt	Protospacer
.****************.*****************..    *

87. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
***************.*******************..  . .

88. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccggatgcggcgtaagcgccttatccggcctacaagaacgt	Protospacer
.****************.*****************..    *

89. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
***************.************.******..  . *

90. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.791 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
***************.************.******..  . *

91. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.767 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgtcttatccggtctac--------	Protospacer
********************.*********.****

92. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.767 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgtcggatgcggcgtaaacgccttatccgacctacaaaatcac	Protospacer
**.**************************.*****..  . .

93. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.767 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
cgccagatgcggcgtgaacgccttatccggcctacaaaatcgt	Protospacer
.***.**********.*******************..  . *

94. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.767 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga----	CRISPR spacer
ggccggatgcggcgttaacgccttatccggcc----acttagcttac	Protospacer
 ************** ****************    .**..*

95. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.744 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgtcttatccggtcta---------	Protospacer
********************.*********.***

96. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.744 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgtcttatccggtcta---------	Protospacer
********************.*********.***

97. spacer 4.1|3044707|43|CP030787|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.744 

tgccggatgcggcgtaaacgccttatccggcctacggctcgga	CRISPR spacer
tgccggatgcggcgtaaacgtcttatccggtcta---------	Protospacer
********************.*********.***

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage