CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP030261	Flavobacterium sp. HYN0086 chromosome, complete genome	5 crisprs	csa3,DEDDh,cas3,PD-DExK,RT,WYL	0	7	2	0

1. CP030261

CRISPR-Cas detection and classification

Crispr_ID: CP030261_2

• CRISPR_ID: CP030261_2
• CRISPR_location: 1003993-1004112
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of CP030261_2

Consensus_repeat	Method
CGTTCCACGTGGAACGTTTTAAAAT	PILER-CR

spacers of CP030261_2

>2.1|1004029|26|CP030261|PILER-CR
CTTTTATTCGAATTCTTTTACTTCAA
>2.2|1004091|10|CP030261|PILER-CR
TCTTTAAATA

CRISPR arrays and Neighbor proteins around CP030261_2

CRISPR arrays

The CRISPR arrays of CP030261_2

>merge|CP030261|2|1003993-1004112|PILER-CR
CGTTCCACGTGGAACGATTTAATCTTTTATTCGAATTCTTTTACTTCAACGTTCCACGTGGAACGTTATAAAAACAACTTTATTTTCTTTAAATATGTTTCACGTGGAACGTTTCAAAAT

>CP030261|2|1|1003993-1004112|PILER-CR
CGTTCCACGTGGAACGATTTAATCTTTTATTCGAAT	TCTTTTACTTCAACGTTCCACGTGGA
ACGTTATAAAAACAACTTTATTTTCTTTAAATATGT	TTCACGTGGA
ACGTTTCAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP030261.1|AXB55908.1|1012591_1012942_-|competence-protein	unknown	unknown	unknown
CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein	unknown	unknown	gnl|CDD|378938
CP030261.1|AXB55901.1|1001737_1003609_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl|CDD|235362
CP030261.1|AXB55892.1|991772_992150_-|GxxExxY-protein	unknown	unknown	gnl|CDD|275083
CP030261.1|AXB55896.1|996077_996518_+|hypothetical-protein	unknown	unknown	gnl|CDD|188306
CP030261.1|AXB55910.1|1013431_1013911_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55904.1|1008174_1009680_+|glutamate--tRNA-ligase	unknown	unknown	gnl|CDD|234953
CP030261.1|AXB55911.1|1013999_1014197_+|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein	unknown	unknown	gnl|CDD|259805
CP030261.1|AXB55905.1|1009710_1011249_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55898.1|997394_999674_-|helicase	unknown	unknown	gnl|CDD|350795
CP030261.1|AXB55894.1|993644_994745_-|DNA-protecting-protein-DprA	unknown	unknown	gnl|CDD|376794
CP030261.1|AXB55907.1|1012331_1012586_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55897.1|996557_997319_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55893.1|992411_993386_+|tryptophan--tRNA-ligase	unknown	unknown	gnl|CDD|234866
CP030261.1|AXB55899.1|999774_1000359_-|OmpH-family-outer-membrane-protein	unknown	unknown	gnl|CDD|214922
CP030261.1|AXB55895.1|994982_995954_+|SPOR-domain-containing-protein	unknown	unknown	gnl|CDD|380133
CP030261.1|AXB55900.1|1000584_1001433_-|methyltransferase	unknown	unknown	gnl|CDD|372616
CP030261.1|AXB55903.1|1004579_1008011_-|hypothetical-protein	unknown	unknown	gnl|CDD|372724
CP030261.1|AXB55902.1|1004163_1004583_-|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl|CDD|272871

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP030261.1|AXB55901.1|1001737_1003609_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl|CDD|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
CP030261.1|AXB55892.1|991772_992150_-|GxxExxY-protein	gnl|CDD|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	9.15275e-44
CP030261.1|AXB55896.1|996077_996518_+|hypothetical-protein	gnl|CDD|188306	TIGR03319, RNase_Y, ribonuclease Y. Members of this family are RNase Y, an endoribonuclease. The member from Bacillus subtilis, YmdA, has been shown to be involved in turnover of yitJ riboswitch. [Transcription, Degradation of RNA].	0.000330875
CP030261.1|AXB55904.1|1008174_1009680_+|glutamate--tRNA-ligase	gnl|CDD|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein	gnl|CDD|259805	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	1.74794e-131
CP030261.1|AXB55898.1|997394_999674_-|helicase	gnl|CDD|350795	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1. Pif1 and other members of this family are RecD-like helicases involved in maintaining genome stability through unwinding double-stranded DNAs (dsDNAs), DNA/RNA hybrids, and G quadruplex (G4) structures. The members of Pif1 helicase subfamily studied so far all appear to contribute to telomere maintenance. Pif1 is a member of the DEAD-like helicases superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.0917e-49
CP030261.1|AXB55894.1|993644_994745_-|DNA-protecting-protein-DprA	gnl|CDD|376794	pfam02481, DNA_processg_A, DNA recombination-mediator protein A. The SMF family, of DNA processing chain A, dprA, are a group of bacterial proteins. In H. pylori, dprA is required for natural chromosomal and plasmid transformation. It has now been shown that DprA is found to bind cooperatively to single-stranded DNA (ssDNA) and to interact with RecA. In the process, DprA-RecA-ssDNA filaments are produced and these filaments catalyze the homology-dependent formation of joint molecules. While the E.coli SSB protein limits access of RecA to ssDNA, DprA alleviates this barrier. It is proposed that DprA is a new member of the recombination-mediator protein family, dedicated to natural bacterial transformation.	1.21144e-96
CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein	gnl|CDD|378938	pfam12732, YtxH, YtxH-like protein. This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.	2.11136e-11
CP030261.1|AXB55893.1|992411_993386_+|tryptophan--tRNA-ligase	gnl|CDD|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	1.3574e-168
CP030261.1|AXB55899.1|999774_1000359_-|OmpH-family-outer-membrane-protein	gnl|CDD|214922	smart00935, OmpH, Outer membrane protein (OmpH-like). This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.	3.1377e-19
CP030261.1|AXB55903.1|1004579_1008011_-|hypothetical-protein	gnl|CDD|372724	pfam13779, DUF4175, Domain of unknown function (DUF4175).	1.56322e-12
CP030261.1|AXB55900.1|1000584_1001433_-|methyltransferase	gnl|CDD|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.62963e-23
CP030261.1|AXB55895.1|994982_995954_+|SPOR-domain-containing-protein	gnl|CDD|380133	pfam18175, HU-CCDC81_bac_2, CCDC81-like prokaryotic HU domain 2. Second of two HU domains found in bacterial proteins typically fused to a C-terminal transmembrane helix and an extracellular peptidoglycan-binding domain. The HU domains in many of these proteins are predicted to function in tethering the nucleoid to the cell envelope.	1.8913e-24
CP030261.1|AXB55902.1|1004163_1004583_-|rRNA-maturation-RNase-YbeY	gnl|CDD|272871	TIGR00043, Endoribonuclease_YbeY, rRNA maturation RNase YbeY. This metalloprotein family is represented by a single member sequence only in nearly every bacterium. Crystallography demonstrated metal-binding activity, possibly to nickel. It is a predicted to be a metallohydrolase, and more recently it was shown that mutants have a ribosomal RNA processing defect. [Protein synthesis, Other].	3.87836e-33

Protein sequences

>CP030261.1|AXB55901.1|1001737_1003609_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MFLEEYDVIVVGAGHAGSEAAAAAANLGSKTLLVTMSLQNIAQMSCNPAMGGIAKGQIVREIDALGGYSGIVSDKTAIQFKMLNKSKGPAMWSPRVQSDRMRFAEEWRMMLEATPNLDFYQEMVKGLIIEDGRIKGIRTSLGVEIRSKSVVLTNGTFLNGLIHIGEKQFGGGRAGESAATGITEDLIKAGFEAGRMKTGTPPRVDGRSLDYSKMNEEKGDAKPAKFSYSDVTAPLTHQRSCHMTYTSLNVHDILREGFDRSPMFNGRIKSLGPRYCPSIEDKINRFADKERHQLFVEPEGWNTCEVYVNGFSTSLPEDIQFKALSSVAGFEKVKFFRPGYAIEYDFFPPTQLKHTLETKLVEGLYFAGQINGTTGYEEAASQGLMAGINAHLKVHEKDPLILKRDEAYIGVLIDDLITKGTEEPYRMFTSRAEYRTLLRQDNADFRLTPMSYEIGLASEDRLRRMERKLNESEKMVSFFKETSVSVAETNPILEAKESAPITQGDKMFKIFSRPQVELEDMVKFEKVEDYIRENDLDEEIVEQAVIQVKYSGYIEKERNNADKLNRLEEVKIPENFDYNKIKSMSIEAKQKLSKIRPVTISQASRISGVSPSDISVLLIYMGR
>CP030261.1|AXB55900.1|1000584_1001433_-|methyltransferase
MNVLNKKHLLTVKDHSVSKEIFDLYYDEELDMLITSPQPELENLGKYYESEDYISHTDNKRSLFEKAYHFVKNIALQNKLNLINSEQPKKGKLLDIGAGTGDFLLTAKNNGWETIGVEPSERAKNIAKQKGISFVEEISSLENNSLDVITMWHVLEHVPNLELQIQELKRLLKPTGTLIVAVPNYKSFDADHYQTFWAAYDVPIHFWHFSKKSIQVLFERVDMKLEKILPMKFDSFYVSLLSEKYKTGKMNYIKAFFIGLKSNWKASKTKEFSSHIYVLKNK
>CP030261.1|AXB55899.1|999774_1000359_-|OmpH-family-outer-membrane-protein
MKKALVIIALSVFAVSCNKTAEVKEVKTAYVDTSVLMKEYTEAKDLEAKYKAQAEEKGRQLQAEISRFKQDAANFQSQAQANGQAWAQQRGAELQKREQQLGYAQQALAQQLQQESGVEMDSLVSGVKKFIKEYGKKNGYSYIYGTGDAATVLYAEEKYDITKQIIKELNDKYKAEPKSDAKPAAETKEGEAKK
>CP030261.1|AXB55898.1|997394_999674_-|helicase
MQNVSEAAAYTLQFINQTQKSIFLTGKAGTGKTTLLREIIATTHKNTVVVAPTGIAALNAGGVTIHSMFQLPFSAFIPSYDVSAQFTETVKFENKESLRRHFKMNNVKRNVIRNMELLVIDEVSMLRADLLDAVDFMMQSVRRNSQPFGGVQVLFIGDLLQLPPVIRDEEWRTLKNYYRGKFFFHSHVLQQYPPIYIELSKIYRQTDDTFISVLNNLRNNQITPEDIAVLNQYVKPDFDFKENKGYITLTTHNAKADSINSQSINDLQGKEYIYTPFLVGDFPEKIFPVEEELKLKVGAQIMFVKNDLSFEKRYFNGKMGVIKSLSDEEIFVHFPEENMTLEVEKYEWKNIRYKVNEQTKEIEEEVLGTFAHYPIKLAWAITVHKSQGLTFDKAALDVSQVFLPGQAYVALSRLRSLNGLILLSPMQMNGISNDQDVMDYALNKATEEVLKNALHFETKNFIHNYLINSFNWTELAQEWRNHRFSYNENAAGSEKSKHAVWAHRRLETIEQLLEPSQKFIIQLNKIFSKETVDLFFVKERVEAAYDYFFKPMDKLIDDLIYKIAEIQKFKKVKEFYEELHFLEDLQTKAVLRLLKAKLLIEVVVSGEAISKEKLSSPFITNYKINKAERIRDELKITNTDIFRTEEPVVRYKTAKTDKNALKTAKKTTVEETHDLWLEKNSVEDIARMRKLNVQTIEGHLIRLIQAKKIDINEVLPYDKILALREAFEFYQEESLSGLKEKHGDEFTWDELKMFKASIN
>CP030261.1|AXB55897.1|996557_997319_-|hypothetical-protein
MKIVRLFLVYFIFCSLNMRAQDLKPEYQIIISKFISEVKSGNKTAVSNRIKFPLKRDYPIPAIKNKTDFVKKYNQIFDPVLIDKITKSDPAKDWSEMGWRGIMLNQGDVWIDTDGKISSVNYQSEAEKKLKNSLIASQKKNVNSSISDFKQPVAILETSKFRIRIDDLGNGKYRYASWSTKQKMTDKPDLVIENGVFFADGTGGNHHYEFKKGDFKYECHFIVLGEKNSAPAALIVYQAEKKILSQNAKIVSR
>CP030261.1|AXB55896.1|996077_996518_+|hypothetical-protein
MKKIFKTLVFLLLLNSHSFFAQQIQNNSTQDLEFNKSEAETQRMLRENHKKLDDKIELLKKELKELETKKKSLSKSENNLKSTKEKISKLELANQKIENKITTTTVSDEEIQKQKIKTKENEVNIQKLKLTQITQEKELEKAMSAI
>CP030261.1|AXB55895.1|994982_995954_+|SPOR-domain-containing-protein
MKIEVYISQLLYRYQCVTVPGFGAFLTEIHSAQLNEGTNSFFPPKKTISFNSRIKNNDGLLANHIAQAEKTSYGFAVSAIAFEVLNWKKTLDENEVILLKNIGELRLNSEGNIVFRPNDQTNYLANSFGLSPFVSPVVKKEIFEKKIEKIAAKEKEAVLLYENEEQTKSSNSFLRYAAILVLGLGITGSIGYPLYQNQIDTQTLLVEKSVQKKVQNKIQEATFFIKSPLPAVTLSVDSAKVETVEPTMPYHIMAGAFRSEQNARKAYNQLIKDGFKARMLEENKHGLFPVLYGSYATMKEAEEAQKEIQKGENPQAWILVENL
>CP030261.1|AXB55894.1|993644_994745_-|DNA-protecting-protein-DprA
MTDQELFYLLALLKVDGVGDIMGKKLLHSFGSAEAIFNAKNNHLVAVDGIGTVLLKNLKDKSVFEKAQKELELIKKNDIQVSFFQDETYPERLKHCIDGPILIFTAGNINLYHKRIISIVGTRQITSYGTEFCRKLIEDLAPLDPVIVSGFAYGVDIVAHQAAMNCNLQTIGVLAHGLNQIYPRTHKKYMAKMELNGGFITEFWSDSNPDKEKFVRRNRIVAGMTEATIVIESADKGGSLITANMANEYNRDVFAVPGRITDKYSQGCNNLIKMQKANVITDAADLIYMLNWDLKEKPKNIQKQLFVELEPDEQKIYDFLLKNGKELLDIIAVECNFPIYKMSGILINMELKGIIRPLPGKLFEAI
>CP030261.1|AXB55893.1|992411_993386_+|tryptophan--tRNA-ligase
MAKILTGVQSTGTPHLGNLLGAIIPAIELSNNPDNESYLFIADLHSITQIKDGKTLRENTYSTAAAWLACGLNPEKVTFYRQSDVVQTTELTWYLSCFFPFQRLTLAHSFKDKADRLDDVNAGLFTYPMLMAADILLYDAEFVPVGKDQLQHLEITRDVASRFNHQMGETFVLPEAKIQENIMLIPGTNGGKMSKSANNIINIFLDDKALRKQVMSIETDSTPLEEPKNPDTCNAFAIYSLLGNEEQIAEMRANYLGGNYGYGHAKQALLELITEKFKTEREKYNYYINNLDEVDSLLKKGAAKASVIADGVLAKVREVLGFSK
>CP030261.1|AXB55892.1|991772_992150_-|GxxExxY-protein
MTENEMSNIVIGLAIEIHKKLEPVLLENVYKECLFYKIKQRGLLVEKEKSLPLVFEEVKLDCGYRVDLLVENKFLIEIKSVESLTVNHLAQTLTYLKLGNFKLGLLINFSESLLKNGIRRVVNNL
>CP030261.1|AXB55902.1|1004163_1004583_-|rRNA-maturation-RNase-YbeY
MINFNYETDFTLGDEQAFSDWLSAVIVSENKNEGEINYIFCDDEYLHKINVEYLDHDTLTDIISFDYTVGNELNGDIFVSVERVADNAKDFNVSFADELKRVLSHGILHYCGYKDKSDEDAQLMRAKEEEKMKMFHVEQ
>CP030261.1|AXB55903.1|1004579_1008011_-|hypothetical-protein
MKTTSAIYQKLEAFIKKYYTNELIKGMLLFTGFGLLYFLFTLFVEYFLWLKPLGRTFLFWLFIAVEVFLLVRLIIFPLFKLFKLQKGIDYTQASKIIGNHFTEVSDKLTNFLQLSADNNAESSELVLASIEQKANSLQPIPFGNAINFKANKKYLPLALVPVLLFAVFYISGNSNIISQSLNRVVHFNSAFLPPAPFKFVVLNSNLQAEQNKDFMIKMESVGNIVPENVMIHIGDESYFMESSQPGKFEFKVEKPAEDISFSFEGNNVTSQEYELKVITVPSIANFEMVLNFPSYLKKKSETIQGIGNAIVPEGTTVTWKMNTKSTQEIVWKRDNEVFRFNKIENDFKLAKNISQNTEYQILTSNDKVKNYEKLDYQLSVIKDQYPTINVGPAPDSLKLDKNYILGRLGDDYGLSKLQIVYYERNKPQSAKRGNIPVKAGVFDQFVFNFPSNLPVEEGVSYEYYFEVFDNDAPHGFKSTKSSTFSDRVATTDEIRDQELQQQNQNINSLSKSLKNQNKQISEMDKLQNTGKEKNNLEFKDQQKINDFIKRQKQQDEMMKQFSEKMNQNLDKFKSDKKDKTADDLQKRLDNAEKDLEKNQKLLDELKNLNDKLNSEELFDKMEKFKQISKNQSRNLEQLVELTKRFYVSKKAEQVAEKLNKLSEQQEQLSNKEKENTKEKQDEINKSFDKIQEDLKDLKEENKTLKKPLDIPSDASKEKDVDNDLQKASEELSKKNTSSAKPKQKSAAKKMKSMAQEMQSEMEGGEQEQMEEDVAMLRQILDNLLAYSLSQEDVMKQFKAMKLGSSTFTKNIKIQQNLKQQFRHVDDSLFALSLRNPKVAEDVTKEIGNVQYNMDKAIETLTDVQIPRGVSHQQYAVSSANKLADFLSDLLNNMQMSMSKPGAGKPKPGDGQGMQLPDIIQKQKGLADKMKEGMKPGQKPGDKPGEGQDGKSGQGQNGQGKEGQGKEGQGKEGQGKEGQGNKSGDKGSSGKDGKNGKGEKNGNDGEDGEGDAEAIMEIYKEQVKLREALQKELAKKGLDAQGKSIIDQMKQSEKQILNKGFKNENLQRILNIQQELWKLNNAVQQQGQDTQRQSETNKAEFTNRSNALPSSLLEYLNSVEILNRQSLPLRSNFNQKVQEYFNTK
>CP030261.1|AXB55904.1|1008174_1009680_+|glutamate--tRNA-ligase
MSKQVRVRFAPSPTGPLHIGGVRTALFNYLFAKKHNGVFYLRIEDTDQTRFVPGAEAYIMEALEWLGIAPEETVGKNEKFGPYRQSERKDLYQQYADQLINSGWAYYAFDTPEALDAHRKQHEAEGKTFIYNHHNREKLDTSLVISAEETAKRIANGEHYVIRFKTPVDETLHLKDIIRGDVKFETNLLDDKVLFKSDGMPTYHLANIVDDHLMETSHVIRGEEWLPSMPLHVLLYKAFGWEAPEFAHLPLILKPIGNGKLSKRDGDKMGFPVFPLEWKTEEGVSSGYREKGFFPEAVVNFLALLGWNDGTDKELFTLEELAEAFDLNRVHKAGAKFDPEKNKWFNHQYLVKQNDEDLAKAFTPILQEKGIDISKYNITRIVSLIKERAHFVSEFWDLTDFFFQAPTSYDEKASKNWKEETPALMQELISTLEYIDGFDSANIESVVKDWLTKNEIGMGKVMQPFRLSLVGALKGPHLFDIVEIIGKEETISRIQKAISTL
>CP030261.1|AXB55905.1|1009710_1011249_-|hypothetical-protein
MNFFVKYFFTFEPNLTKKTKPMKNLFVSISLMASAYLSSQTTIIDKKFDEKVIPITFEYLPISQKFVLFSGEKIKMTASLFTTTASAFDVNGKESKLFENQKYYKCTYSNSENAFMNVDIEKSIWSYNYKVYFNNQVADLSSEKIKDMNFSYFGIDIGSVAFAQYQRGAGTIDGAFNDFYLLGFSNQKNRYGINFEKDDIFLEVIELKSGSRKRVQIEKPDLTLLKGDAYAKSKNTITFTSKLNGNENFDLITKSISADFKTVIIYKSTYDFDGKKLKTVPFTLKLENNFFVISNNGGGPLYSVSSGPDEFDNLNINNYLEDKKTGDLYVFGIFSDEPIKKIGERTHLKGYYVFKFDKDGNKLWESINNIDDKEFFEKIKYGQGFDVRLAEYNENLVFSASINAFTEFTNASIIDKKNGAVLKSSFLEYNNNASHEKFSAFINNTYDYKELRNKSFSPISFAAMTLNDDLFKYLKSIPEGDKRLHFTTLFSQQGIWLVETDNKNYYKVLLFK
>CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein
MGTGLIIFLVLAFFIFMSSFFTVKQQTSVIIERFGKFQSVRNSGLQLKIPLVDRLAGRVNLKIQQLDVIIETKTRDNVFIKMKVSVQFKVIQEKVYEAFYKLEYPHDQITSYVFDVVRAEVPKLKLDDVFERKDDIAVAVKRELNEAMSTYGYDIINTLVTDIDPDIQVKNAMNRINAADREKTAAEFEAESSRIRIVAKAKAEAESKRLQGQGIADQRREIARGLVESVEVLNSVGINSQEASALIVVTQHYDTLQAIGADTNSNLILLPNSPQAGSDMLNNMVASFSASNQVGEMMKKNNKKIEKPKPIQPQSGYEDDIQPDVQQ
>CP030261.1|AXB55907.1|1012331_1012586_-|hypothetical-protein
MEKKKYSSYAEIERDLEILKLEKDINYQKLVLSFQKTKESITPQNIVSGFVSSYTDYFKNSYPQILQSIIPIVVNWFTNKKRGS
>CP030261.1|AXB55908.1|1012591_1012942_-|competence-protein
MAFEELKENSEKIQDQTKVYIDSHLAYYKLWGFKVAMKSTTLIFKFTLILLCFSMVLIFGSFAAAYAFGDLLGSNALGFLAVGGIYIFFTILLFFIKDKMVEGPILEKFSEIFFND
>CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein
MSNNSNTIAAILAGAAVGAAIGILFAPEKGSKTRAKIKEGIDDAKHNLQDSFEASSEVLREKFTGATKNLDGTLNDLLSNVSHKTEEVITFLESKLADLKAQNAKLQK
>CP030261.1|AXB55910.1|1013431_1013911_-|hypothetical-protein
MKILYFTLAMLFANVAISQTHQITKHNGDQLDVNFIKNENGLIYYSLNGSSEEVKISKHAVSSITNKQTKQTQKVSDKIVVDSKDDYKMVTVLPQEKTIGLKQAASFTGVSTRTKGEPPIANQNQTAMRIKTKSASNGYPFVSIVEKGDGKYEAVSYAY
>CP030261.1|AXB55911.1|1013999_1014197_+|hypothetical-protein
MKQFEKYLLREILSKLHHNKNENIKLSFQEINSETCCNKNYEFLKTTNFILVSLTANFNFYKNHL

Crispr_ID: CP030261_3

• CRISPR_ID: CP030261_3
• CRISPR_location: 1018333-1018455
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP030261_3

Consensus_repeat	Method
GTTCGAATTTTGACTACGCTTATAAACCTTCAAG	CRISPRCasFinder

spacers of CP030261_3

>3.1|1018367|55|CP030261|CRISPRCasFinder
GAAATTTGAAGTTTTTTTATGTTTAATTTTTAGAAAAAATTAATTAAATATATTG

CRISPR arrays and Neighbor proteins around CP030261_3

CRISPR arrays

The CRISPR arrays of CP030261_3

>merge|CP030261|3|1018333-1018455|CRISPRCasFinder
GTTCGAATTTTGACTACGCTTATAAACCTTCAAGGAAATTTGAAGTTTTTTTATGTTTAATTTTTAGAAAAAATTAATTAAATATATTGGTTCGAATTTGGACTACGCTTATAAACCTTCAAG

>CP030261|3|1|1018333-1018455|CRISPRCasFinder
GTTCGAATTTTGACTACGCTTATAAACCTTCAAG	GAAATTTGAAGTTTTTTTATGTTTAATTTTTAGAAAAAATTAATTAAATATATTG
GTTCGAATTTGGACTACGCTTATAAACCTTCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP030261.1|AXB55914.1|1017348_1017645_+|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55919.1|1022563_1022797_+|DUF2007-domain-containing-protein	unknown	unknown	gnl|CDD|378182
CP030261.1|AXB58963.1|1025825_1026095_-|DUF1294-domain-containing-protein	unknown	unknown	gnl|CDD|377743
CP030261.1|AXB55924.1|1031044_1032442_-|licheninase	unknown	unknown	gnl|CDD|366548
CP030261.1|AXB55921.1|1025245_1025677_+|ribose-5-phosphate-isomerase-B	unknown	unknown	gnl|CDD|376799
CP030261.1|AXB55922.1|1026210_1028334_+|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl|CDD|225094
CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein	unknown	unknown	gnl|CDD|259805
CP030261.1|AXB55911.1|1013999_1014197_+|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55910.1|1013431_1013911_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55913.1|1017123_1017342_+|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55912.1|1014861_1016979_-|glutamine--tRNA-ligase	unknown	unknown	gnl|CDD|235424
CP030261.1|AXB55916.1|1018888_1019566_-|LysE-family-translocator	unknown	unknown	gnl|CDD|280058
CP030261.1|AXB55917.1|1019580_1020249_-|DUF2807-domain-containing-protein	unknown	unknown	gnl|CDD|371327
CP030261.1|AXB55907.1|1012331_1012586_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein	unknown	unknown	gnl|CDD|378938
CP030261.1|AXB55920.1|1022853_1024395_-|T9SS-C-terminal-target-domain-containing-protein	unknown	unknown	gnl|CDD|275036
CP030261.1|AXB55908.1|1012591_1012942_-|competence-protein	unknown	unknown	unknown
CP030261.1|AXB55915.1|1017647_1018007_+|dihydroneopterin-aldolase	unknown	unknown	gnl|CDD|376737
CP030261.1|AXB55923.1|1028443_1030939_-|hypothetical-protein	unknown	unknown	gnl|CDD|275036
CP030261.1|AXB55918.1|1020272_1022453_-|ribonuclease-R	unknown	unknown	gnl|CDD|273947

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP030261.1|AXB55924.1|1031044_1032442_-|licheninase	gnl|CDD|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	1.55247e-40
CP030261.1|AXB55919.1|1022563_1022797_+|DUF2007-domain-containing-protein	gnl|CDD|378182	pfam09413, DUF2007, Putative prokaryotic signal transducing protein. This is a family of putative prokaryotic signal transducing proteins of Pii-type.	0.000582353
CP030261.1|AXB58963.1|1025825_1026095_-|DUF1294-domain-containing-protein	gnl|CDD|377743	pfam06961, DUF1294, Protein of unknown function (DUF1294). This family includes a number of hypothetical bacterial and archaeal proteins of unknown function.	1.4646e-22
CP030261.1|AXB55915.1|1017647_1018007_+|dihydroneopterin-aldolase	gnl|CDD|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	2.19588e-30
CP030261.1|AXB55922.1|1026210_1028334_+|RNA-binding-transcriptional-accessory-protein	gnl|CDD|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein	gnl|CDD|259805	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and, in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	1.74794e-131
CP030261.1|AXB55912.1|1014861_1016979_-|glutamine--tRNA-ligase	gnl|CDD|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP030261.1|AXB55916.1|1018888_1019566_-|LysE-family-translocator	gnl|CDD|280058	pfam01810, LysE, LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.	2.7495e-14
CP030261.1|AXB55917.1|1019580_1020249_-|DUF2807-domain-containing-protein	gnl|CDD|371327	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).	1.95285e-45
CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein	gnl|CDD|378938	pfam12732, YtxH, YtxH-like protein. This family of proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved. Proteins is this family are functionally uncharacterized.	2.11136e-11
CP030261.1|AXB55920.1|1022853_1024395_-|T9SS-C-terminal-target-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	1.6803e-12
CP030261.1|AXB55921.1|1025245_1025677_+|ribose-5-phosphate-isomerase-B	gnl|CDD|376799	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase. This family of proteins contains the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB).	3.81684e-79
CP030261.1|AXB55923.1|1028443_1030939_-|hypothetical-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	8.29307e-13
CP030261.1|AXB55918.1|1020272_1022453_-|ribonuclease-R	gnl|CDD|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0

Protein sequences

>CP030261.1|AXB55915.1|1017647_1018007_+|dihydroneopterin-aldolase
MGVIKLKNIRTFSYHGCLIEEGKIGSDYTVDLKIKTNLQKSAETDHLLDTVDYVHLNKIVTEEMAIRSHLLEHVAKRINIRVLAEIETVEKTTVWVSKINPPIGGDVESVTIKMTEIRK
>CP030261.1|AXB55914.1|1017348_1017645_+|hypothetical-protein
MFEIIILLRAELEVDEIAEYYESLSDGLGTKFFNEYQKYVDTLNTFPFFEEKYNIVRTLPLKKFPYTIHFTVDEINKIVAVHAVISNYQDPNTTRIKL
>CP030261.1|AXB55913.1|1017123_1017342_+|hypothetical-protein
MRQLTVTIPDDFYETFISFFKHVPEVSINETQENEIPLWQQEMVLDRIKNAKPEDYISWEESKKKLNAKWNK
>CP030261.1|AXB55912.1|1014861_1016979_-|glutamine--tRNA-ligase
MASEEKSLNFIEQIIEEDLKSGLSQTKLHFRFPPEPNGYLHIGHASSIALNFGLGIDYQSPVNLRFDDTNPEKEEQEFVDAIKKDVEWLGYTWAEERYASDYFQQLYDWAVLLIKKDKAYVDSQSSEDMAIQKGTPSTVGTDSPYRNRSVEENLDLFERMKNGEFEAGTHILRAKIDMKSTNMLMRDPIMYRILHKHHHRTGDAWKIYPMYDWAHGQSDYLEEISHSFCTLEFLPHRELYDWFLDQILDENKLRPKQREFARRNLSHTVVSKRKLQQLVKEKHVNGWDDPRMSTISGLRRRGYTAASLRNFANTIGIAKRDNLINVSVLEFCIREDLNKIAPRVMAVLDPVKLVITNYPEGKEEWLEAENNQEDENAGFRKVPFSRELYIEREDFLEEAPAKFFRLTLGKEVRLKNAYIIKGESVIKDAEGNITEIHVTYDTDSLSGSGTEASQRKVSGTLHWVSIQHALEAEVRLYDRLFTDEAPDSYKEKNFLDFVNPNSLEIVTGFVEPSLSTAQNEDKFQFQRLGYFTVDKDSTASKLVFNKTVGLKDAWEEKGKKEENSINNSLKEINKYFKVESKPERIAIESAIGENIKNVTSFSLLQNSLKKNINNNKASLLFAQFILKYGSWKSTDFEEEDIKKLYSMSLKSESTYVRSKALLNLRDIEEASFKNQFDDEILKLYSNPPKNASERENEILAEMVKK
>CP030261.1|AXB55911.1|1013999_1014197_+|hypothetical-protein
MKQFEKYLLREILSKLHHNKNENIKLSFQEINSETCCNKNYEFLKTTNFILVSLTANFNFYKNHL
>CP030261.1|AXB55910.1|1013431_1013911_-|hypothetical-protein
MKILYFTLAMLFANVAISQTHQITKHNGDQLDVNFIKNENGLIYYSLNGSSEEVKISKHAVSSITNKQTKQTQKVSDKIVVDSKDDYKMVTVLPQEKTIGLKQAASFTGVSTRTKGEPPIANQNQTAMRIKTKSASNGYPFVSIVEKGDGKYEAVSYAY
>CP030261.1|AXB55909.1|1013026_1013353_-|YtxH-domain-containing-protein
MSNNSNTIAAILAGAAVGAAIGILFAPEKGSKTRAKIKEGIDDAKHNLQDSFEASSEVLREKFTGATKNLDGTLNDLLSNVSHKTEEVITFLESKLADLKAQNAKLQK
>CP030261.1|AXB55908.1|1012591_1012942_-|competence-protein
MAFEELKENSEKIQDQTKVYIDSHLAYYKLWGFKVAMKSTTLIFKFTLILLCFSMVLIFGSFAAAYAFGDLLGSNALGFLAVGGIYIFFTILLFFIKDKMVEGPILEKFSEIFFND
>CP030261.1|AXB55907.1|1012331_1012586_-|hypothetical-protein
MEKKKYSSYAEIERDLEILKLEKDINYQKLVLSFQKTKESITPQNIVSGFVSSYTDYFKNSYPQILQSIIPIVVNWFTNKKRGS
>CP030261.1|AXB55906.1|1011328_1012312_+|SPFH-domain-containing-protein
MGTGLIIFLVLAFFIFMSSFFTVKQQTSVIIERFGKFQSVRNSGLQLKIPLVDRLAGRVNLKIQQLDVIIETKTRDNVFIKMKVSVQFKVIQEKVYEAFYKLEYPHDQITSYVFDVVRAEVPKLKLDDVFERKDDIAVAVKRELNEAMSTYGYDIINTLVTDIDPDIQVKNAMNRINAADREKTAAEFEAESSRIRIVAKAKAEAESKRLQGQGIADQRREIARGLVESVEVLNSVGINSQEASALIVVTQHYDTLQAIGADTNSNLILLPNSPQAGSDMLNNMVASFSASNQVGEMMKKNNKKIEKPKPIQPQSGYEDDIQPDVQQ
>CP030261.1|AXB55916.1|1018888_1019566_-|LysE-family-translocator
MINDILAGLPWGLFLSFMVGPVFFILLETSITKGFRAAIVFDCGVVLGDIFFIAIAYLGSYRLIQSLKDKPALFIFGGIIMLAYGIISFVRLKNEEKIDDDEIDRDIIKRNYGSLFIKGFLLNVINIGVLGFWLAVIISIGPKLEMQNSRMLTFFTSVIITYLLVDCLKIVLAKQLKSKMTPTNIVKIKKGISIVLMVFGVALITQGWFPKEKEMVKNAFEKIEK
>CP030261.1|AXB55917.1|1019580_1020249_-|DUF2807-domain-containing-protein
MKKLIIGAAILFVQMSFGQVTKELGEFDTVKVYDKLNVKLVQSSENKVVIKGAREAEVEAVNKNGILKLRMPFPKLLSGNDLDITLYYKRIELIDVNEGAEVTSKETLKATSFKVSAQEGGKINVDLNVDKLKVSSVSGGEITATGKADNLDASLGAGGYFLGSKLATSQTKVSVSAGGKADVNASTLVDAKVSAGGSIYIYGKPKQINQKTVFGGKIEEVK
>CP030261.1|AXB55918.1|1020272_1022453_-|ribonuclease-R
MSKKIRKPIKKEKDFSGKIIKILSQNANKPFNYKQIGAKLELDDTNSRNQIIKELKILASQKKIIESEPGKYLVKAESQDYYEGTIDMTSRKTAYFICPDFAEDVFIPTNNLNRALDKDKVKVYVYNRRKGKRPEGEVIEVVERDKTEFVGVIDMQPNFAFVSTANPKMYTDIFIPKDKIGEAENGDVVLVKIEDWPKRADSPFGSVIKVLGKPGEHNTEIHAILAEYGLPSDFPVEVEVYAQKIDTSIQESEIAKRRDMRDTLTFTIDPKDAKDFDDALSFKKLENGNFEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPNEEKYTFSAIFEVSPTAQVINQWFGRTVIYSDQRFAYEEAQYIIETKDNTIPVDVSITGESYVVSDEITEATLKLDELAKILRKKRMQNGAISFDKVEVKFNLDAEGEPEGVYFKVSKDANHLIEEFMLLANRKVAEYIGKQKKTFVYRIHDEPNEDKLIAMQTVIAKFGYKIDFRNKGDISKSLNALMEEVNGKKEQNLIDTLAIRSMSKAKYSTDNIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDNGASVDEEVYETKCLHCSNMESLATNAERDSIKYMQVKYMQDHQDEEFLGVISGVTEWGIYVEIVSNKCEGMVRIREIKDDYYTFDEKQYALVGSTSNSILQLGDEIYVKVKNADLVKKQLDFHFLRRAE
>CP030261.1|AXB55919.1|1022563_1022797_+|DUF2007-domain-containing-protein
MESFKTIAVFNYQHETVVLKHLLEQEEIPYFFENEMTLSVVPMYTSALGGIKLKVHPNDFEEVQKILDNLNNPLTIV
>CP030261.1|AXB55920.1|1022853_1024395_-|T9SS-C-terminal-target-domain-containing-protein
MHLLVNMFLYLLEIYKKQFMKKTLLILLFPLLSIGQTQIGTDINGETAQNYSGSSISLSSDGRVVAISASVEAGNGADSGQVRVFKNISGVWIQQGQAINGKDPYDSSGDSLSLSSDGSVVAIGSRYNDRNGYDSGQVRVYKNVSGVWTQVGADISGKANEDYSGWSVSLSADGTVVAIGAPGNDGSEGYRFYTGQVRIFKNISGVWTQIGADIYGEGAFDQSGDSVSLSADGNVVAIGAIYNKGNGTDSGHVRIYKNVSGVWTKIGADIDGKAIYDRIGSKLSLSADGNVVAIGRNFNESIGYSSSSGQVRVYKNVSNVWTQQGADINGEAISDSSGSSVSLSSDGSVVAIGAPYNAGNGQYSGHVRIYKNVSGVWIQLGFDIDGKAVGDRSGSSVSLSSNGNVVAIGAPLSSENGNYSGQVRVFDLSAAVLSSASFVLSSSSVYPNPSSDIVNIDLNQDLTLQKVNIYNTLGQLIKTENSNSISVSSLSTGVYFFEIITDRGKETKTVLVK
>CP030261.1|AXB55921.1|1025245_1025677_+|ribose-5-phosphate-isomerase-B
MKISIGNDHAGPEYKKAIVEMLKAKGYEVTNYGTDTDASVDYPDFGHPVANDVSEGKADFGIVICGSGNGIAMTVNKHPKVRAGLCWTKEIAYLTRLHNDANIVSIPARFTSIPQAVEIVETFLTTAFEGGRHQNRVNKIACS
>CP030261.1|AXB58963.1|1025825_1026095_-|DUF1294-domain-containing-protein
MEVLLLYFLFVNSLTFIITGYDKFQAKRNKRRIQEAVLFLLAFIGGSIGLFIGMIFFRHKTSKFTFIMKFLYIILVQAVVIYLKYNRNI
>CP030261.1|AXB55922.1|1026210_1028334_+|RNA-binding-transcriptional-accessory-protein
MTNIQFIAKSVQAPAVSIQNTVKLLEEDCTIPFISRYRKDATGNLDETVIEQIAKLQKDYDTLVKRKEAVLKSIEEQKALTPDLKKKIEDSFDLQEIEDFYLPYKKKKKTKADVAREFGLEPLAKIIMSESDVDVDFVSTQYINENVINEEAAMQGARDIVAEWINENIYVRKQLRRLYQRKAVIATKVVKKKAEEEGAQKFNQYFDWEEPLTKAPAHRLLAMLRAENEGFIKMKIDVDIDDAYDVIDEIIIKKQNSTTAHLQLAIEDSYKRLLNPAIGNETLQEAKAKADANSIQVFANNLGQLLLAPPLGEKRILAIDPGFRSGCKVVCLDEKGDLLYNETIYPHAPQHEETMAIKKIRSMVNAYQIDAISIGNGTASRETEFFIKKIAFDKPVQVFIVSEAGASVYSASKIAREEFPNYDVTVRGSVSIGRRLSDPLAELVKIDPKAIGVGQYQHDVDQTKLKEELDNTVIRCVNSVGININTASKHLLSYVSGIGEKLAENIVQYRSENGPFEDRKQLKKVPRLGDKAYQQGAAFIRITNAKNPLDNSAVHPEAYSVVEKMAKDLKLSVNELIANKEKTALIKPEKYITPEIGLLTLKDIIKELEKPGLDPRKSAKVFEFDANVKSIKDLKTGMILPGIVNNITNFGCFVDIGIKESGLVHISQLKAGFVSDVNEVVKLHQHVDVKVTEVDEDRKRIQLTMVL
>CP030261.1|AXB55923.1|1028443_1030939_-|hypothetical-protein
MKKTLLFLLFFLQFFSISAQNPTEIEHNFGTIPGFDDEVKCILIQSDGKIIMAGKFSSYNGNSNIKQIVRLNPDGSIDYSFNYIREGEYYEILSIALQSDGKILVGGTNYLAEKRLIRLNVDGSKDNTFDVGSNFIVKNRVSSISIQPDGKILAAGDYLIARLNSDGSNDASFNLGTGFDNKISSIALQQDGKIVAGGSFNKFKGINQNYLIRLNSDGSKDSTFDIGTGFTGFVNSIIIQPDGKIIVGGRFGTYQGNSQNRLIRLNTNGSKDSSFVVDNYRDVNDSTGVTSLALQSNGKIVVGYGGSGNSDKSAVLQYLNPDGTEDQNFIGTRFNHDIYSVAILNDGKILVGGKFRGWRNNIQNYNIQYYMVCLNADASKDMTFNKETGFDGIILCSALQKDGKILVGGYFNNYKGILQRNLIRLNSDGSIDNSFNLQYKFNNSITSIILQPDGKILVMGSFTYYDNNNYNTSKQYLIRLNPNGSLDTSFAKRFDYEVSAIALQTDGKILVHTYQDNFPNLPKNKLYRLHQDGTQDQSFLTGTDLNNVAYSIVEQSDGKILVGGQFTSFQGTTQNRLIRLNADGSKDNSFNIETGFDASVRCITLQDDGKILVGGDFDNFKEIPQVNLIRLNKDGSKDESFDLGIGFGHLPRSSYSLGVKSIVLQKDKKIIVGGEFQSYKESVQNRLILLNTDGSKDNSFDIGTGFNAPIETIALYSDGKILLGGWFLSYKDQLSSNLIRLKGTEVVLSNEDFIEENKSFSLWPNPVKNTLSINSLNESNYSVKIYDLLGRLIYTNENVSTSIDVSSFNSGLYLIKIKTENGEASQKFIKI
>CP030261.1|AXB55924.1|1031044_1032442_-|licheninase
MKNLLLITVAFWCLESNAQKQSFPANIKFDHGLMASTKNSLDAQNNYDLWKTNFVETCSNGRYRVKFDPSSQTVSEGIGYGMLLSAYKADKDLFDGLWLYYKDNVNGNKVMNWKINGCSETIGQNGATDAELDAAFALIVADYQWGSTGNINYKTDATALISAIKNYEVEANTYVLKPGDQFGGSQITNPSYFSPAYYRAFGVFTNDITFWNQVAAKSYTVINNNLTVNNAVGGLVSDWCEASGAYSSQAGGYNNGGKSYTYDAARTPWRIAVDYLWYGNADAKTYAKKSSDFVRVNLGGSANIKDGYNQNGTVNGQWHNATFVGAFACAAMAGENQAHLDASYTDLKNLNEPNSYFNHTLKTLYSFLLTGNFYLPPTATLSNENFDIEKSTVTLFPNPSADRITVSAPGKSTISIISSSGSVIHQQKTTSELTEINLANQSRGVYFVKISNDDFKSITKKVILK

Crispr_ID: CP030261_4

• CRISPR_ID: CP030261_4
• CRISPR_location: 2721444-2721545
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP030261_4

Consensus_repeat	Method
TACTTTATGTCATTACTTTGCAGGGCTTC	CRISPRCasFinder

spacers of CP030261_4

>4.1|2721473|44|CP030261|CRISPRCasFinder
TCCCGAAGCTTCGGGATCGCTCAGCCTGACAAGCGTTGTGTTTT

CRISPR arrays and Neighbor proteins around CP030261_4

CRISPR arrays

The CRISPR arrays of CP030261_4

>merge|CP030261|4|2721444-2721545|CRISPRCasFinder
TACTTTATGTCATTACTTTGCAGGGCTTCTCCCGAAGCTTCGGGATCGCTCAGCCTGACAAGCGTTGTGTTTTTACTTTATGTCATTACTTTGCATGGGCTT

>CP030261|4|2|2721444-2721545|CRISPRCasFinder
TACTTTATGTCATTACTTTGCAGGGCTTC	TCCCGAAGCTTCGGGATCGCTCAGCCTGACAAGCGTTGTGTTTT
TACTTTATGTCATTACTTTGCATGGGCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP030261.1|AXB57283.1|2734065_2735010_+|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57266.1|2712747_2713131_+|DUF3037-domain-containing-protein	unknown	unknown	gnl|CDD|378608
CP030261.1|AXB57270.1|2716533_2717289_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57271.1|2717285_2718140_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57276.1|2722697_2725145_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl|CDD|181856
CP030261.1|AXB57275.1|2721626_2722547_-|homoserine-kinase	unknown	unknown	gnl|CDD|234920
CP030261.1|AXB57277.1|2725782_2727297_+|histidine-ammonia-lyase	unknown	unknown	gnl|CDD|376303
CP030261.1|AXB57265.1|2711975_2712758_+|aminotransferase-class-I-and-II	unknown	unknown	unknown
CP030261.1|AXB57282.1|2732283_2733804_+|hypothetical-protein	unknown	unknown	gnl|CDD|379719
CP030261.1|AXB57278.1|2727345_2727990_+|DUF47-domain-containing-protein	unknown	unknown	gnl|CDD|224310
CP030261.1|AXB57279.1|2728020_2729361_+|inorganic-phosphate-transporter	unknown	unknown	gnl|CDD|376541
CP030261.1|AXB57274.1|2719859_2721149_-|threonine-synthase	unknown	unknown	gnl|CDD|236418
CP030261.1|AXB57269.1|2715756_2716263_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
CP030261.1|AXB57273.1|2718844_2719729_-|hypothetical-protein	unknown	unknown	gnl|CDD|379425
CP030261.1|AXB57268.1|2714865_2715438_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
CP030261.1|AXB57284.1|2735072_2735588_-|DUF421-domain-containing-protein	unknown	unknown	gnl|CDD|225205
CP030261.1|AXB57281.1|2730523_2731924_+|WG-repeat-containing-protein	unknown	unknown	gnl|CDD|379719
CP030261.1|AXB57272.1|2718143_2718848_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57267.1|2713521_2714631_-|pectate-lyase	unknown	unknown	gnl|CDD|226384
CP030261.1|AXB57280.1|2729636_2730272_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP030261.1|AXB57266.1|2712747_2713131_+|DUF3037-domain-containing-protein	gnl|CDD|378608	pfam11236, DUF3037, Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	1.93699e-63
CP030261.1|AXB57276.1|2722697_2725145_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl|CDD|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
CP030261.1|AXB57275.1|2721626_2722547_-|homoserine-kinase	gnl|CDD|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	5.98523e-125
CP030261.1|AXB57277.1|2725782_2727297_+|histidine-ammonia-lyase	gnl|CDD|376303	pfam00221, Lyase_aromatic, Aromatic amino acid lyase. This family includes proteins with phenylalanine ammonia-lyase, EC:4.3.1.24, histidine ammonia-lyase, EC:4.3.1.3, and tyrosine aminomutase, EC:5.4.3.6, activities.	0
CP030261.1|AXB57278.1|2727345_2727990_+|DUF47-domain-containing-protein	gnl|CDD|224310	COG1392, COG1392, Phosphate transport regulator (distant homolog of PhoU) [Inorganic ion transport and metabolism].	1.55143e-29
CP030261.1|AXB57282.1|2732283_2733804_+|hypothetical-protein	gnl|CDD|379719	pfam14903, WG_beta_rep, WG containing repeat. This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).	1.161e-06
CP030261.1|AXB57279.1|2728020_2729361_+|inorganic-phosphate-transporter	gnl|CDD|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	9.49791e-74
CP030261.1|AXB57274.1|2719859_2721149_-|threonine-synthase	gnl|CDD|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
CP030261.1|AXB57269.1|2715756_2716263_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.16309e-13
CP030261.1|AXB57273.1|2718844_2719729_-|hypothetical-protein	gnl|CDD|379425	pfam14022, DUF4238, Protein of unknown function (DUF4238). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 274 and 374 amino acids in length.	1.11801e-13
CP030261.1|AXB57268.1|2714865_2715438_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.03808e-16
CP030261.1|AXB57284.1|2735072_2735588_-|DUF421-domain-containing-protein	gnl|CDD|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	6.89058e-32
CP030261.1|AXB57267.1|2713521_2714631_-|pectate-lyase	gnl|CDD|226384	COG3866, PelB, Pectate lyase [Carbohydrate transport and metabolism].	2.45872e-45
CP030261.1|AXB57281.1|2730523_2731924_+|WG-repeat-containing-protein	gnl|CDD|379719	pfam14903, WG_beta_rep, WG containing repeat. This repeat contains an N-terminal WG repeat motif. The extent of the repeat is poorly defined. This repeat may form a beta solenoid structure (Bateman A pers. obs.).	8.15843e-10

Protein sequences

>CP030261.1|AXB57274.1|2719859_2721149_-|threonine-synthase
MKYYSLNHNAPKVSFQEAVIQGLASDKGLYFPESITALDPSFFDKIESLSHEEIAFEAIKQFVGDEIPAEKLKEIIAETLVFDFPVVKVEDGIYSLELFHGPTMAFKDVGARFMSRCLGYFNKDKKDAKNTVLVATSGDTGGAVASGFLGVEGVDVVILYPSGKVSDIQEKQLTTLGQNIKALEVDGVFDDCQDMVKKAFLDETLAHKNLTSANSINIARWLPQMFYFFFAYKALKSQNKPLVFSCPSGNFGNICAGIMAKKLGLPIEHFVASTNVNDTVPRFLENGKYDPKPSKATISNAMDVGNPSNFIRIQELYNNDLKAFEKDFSSYSYTDEETLEALKKIYNTDGYIAEPHGAVGYLGLKKELQKYPNAIGIFLETAHPIKFLDVVEPALGITLPIPAQIESVINEDKVSVKIGTYEELKDFLG
>CP030261.1|AXB57273.1|2718844_2719729_-|hypothetical-protein
MKQPIDQNQHIIPQVYLKQFGYVLNNQYKVSVLKIGEKFTRQKSIKSFLAQTNIFDIKSDNPEIGRLFESLNCDIENVYLEIINDLETENKLSEKSQAILLQLIPNFIARSNEWRSNLLFLLNSDAKENVLKMICAHRAESLEELIQKDFYRVMADNPSDDIINRALLFFQEYLLRRIGNYEIVILKSQEGKPWFTTDNPIVLENRTRKFEFMTKESEVYFPLNPDYLIYLHFKDSDDKTNELRSLQSNMIHLVSDEQNFDLQQKIMRNAHEYVIIDGEFKYRIGEEIIEDEEI
>CP030261.1|AXB57272.1|2718143_2718848_-|hypothetical-protein
MIELLDIRNQKLWDEINQKFNIEYAESSDNEYGVYSINNSVTFFIDKSNLCKDSFTHEMLHVYMTIKDLYFTSSLKLTFTQSKILSENLTLQLIEHIGNCLDHVKMLPIYLELGFDRKKFVKDYNQYKCSQEEITQFNNYYKVGKKVNLKMIDAYVGRLVSVLCDPNEDFDYSSDLNKLEKVDPLLFKIIARLINHTKEIKVIDRTIFEDDHRTVISNFYKNMIKWISKNSFAS
>CP030261.1|AXB57271.1|2717285_2718140_-|hypothetical-protein
MEKLQEIFSTRELALIIWGVIIVIFLLIKVKLGDSFTRLIGAFFASKLSAGYLIMILYSICFLYFLNFFGLWDFTLLKDSILWFITFAIVTFFKIDKAYNNNFFIELLNEIFKLTLFLEFVSNLYTFNFWIEFLIFPILLIISLLKSFSELDIKNEITTKFLSNIIAITGLTYFALSVYKSFQDYHNFFSVHNMNSLILPVVLSTLSIPLFYFFALYNTYEQLFLRLPIMNSDPKVQKKLKLQIFYKAKFNLIKVNYLREKLIDFDVNNISDIQEKLDRITSFQ
>CP030261.1|AXB57270.1|2716533_2717289_-|hypothetical-protein
MKKCAYCDTKTKLTKEHIWPRCLITRMPNLTFRYIGSQDKFVTSELVVSDVCSKCNNEKLSKLDSYFCSLYDKSFKDFHEEKKQFIFEYNYDLLLRNLLKIIYNSSRTINSEDNYFENFKHFILNGNETWGNVILILDIITPCTTNGIKIYPTSMRCGTVDVGIKNENFIIWAVSVNSYYFYILISKEKKISETLVEELNNVYNRIPGTIIHPYKTQTLISDFSNQNSYDAHVDFVNNTSEAFYKYTKNSK
>CP030261.1|AXB57269.1|2715756_2716263_-|GNAT-family-N-acetyltransferase
MITKALLEDIPALTTLINSAYRGETSKKGWTTEAHLLEGKRTDEAEMTEIFLDPKNTILKFTENDKIIGSVLLVEKGHQLYLGMLTVSPELQNSGIGKKLLAEAENQAKTLGLSSIIMTVISVREELVAWYKRRGYVDTGEREAFPESEIHVTISDVPLEFIYLEKSI
>CP030261.1|AXB57268.1|2714865_2715438_+|Crp/Fnr-family-transcriptional-regulator
MYNLLRKNIERKVPLTDEEWNIIVSKAELIKLKKNQFLQTQDSNNSYEGFILKGSFKTYILNENGTETVIFFSFENEWMCDLESFYHQKPTTYNIKAIEDSEILVISKVKKAQLFEEVPKIMQFHVLMIERANVAIQQRLLDVLNKTSKQRYLDFKDRYPQKVQSINNKNLSSYLGVSHEFLSKIKRKVS
>CP030261.1|AXB57267.1|2713521_2714631_-|pectate-lyase
MKLKSTLSMFLLTLIFGFTACNSEEIASTSTEASTETTIEAVTSTPTAKIGNCAEVPGWASQNGGTTGGGSSAETTVTTYAQLKSAIENTSVKVIKVSGTITITTRLSFQDQTGKTIYGANGAKLVSTNQTKDASGIINIKRCKNIIIRNLIFEGPGAYDTDGWDNAILDECTNVWVDHCEFRDGVDGNFDIKNKSDYISVTYSKFHYLKPPKAGGSGGSDDHRYSNLIGSSDGATGDRGKLRITFARCWWAPGCKERMPRVRFGKVHLVNNFFNSTVSNKCVAAGFEANIRVESNVFEGVKTPIDLMSGFTAVTASDNVFTNTTGNQAGSGTAFTPPYSIVKLAKTAVKADISANAGATLGGNVCGSF
>CP030261.1|AXB57266.1|2712747_2713131_+|DUF3037-domain-containing-protein
MQDNHLYEYAVIRVVPRVEREEFLNIGIILFCKKAKYIKVLFHLNKEKIQALSADFDIEQLECNLTSLEKITNGAKDGGPIAEFEIPERFRWLTAIRSSAIQTSRPHPGLCQDLEKTIQRLFEELVL
>CP030261.1|AXB57265.1|2711975_2712758_+|aminotransferase-class-I-and-II
MKNNFDLRTVNVMRYITPLREGGSLPALAEADDDFKYVLKFRGAGHGVKALIAELVGGQIAKALKLQLPELVFANLDEAFGRTEADEEIQDLLQGSQGLNLALHFLSGSITFDPAVTTVDAKLASQIVWLDAYITNVDRTFKNTNMLIWHKELWLIDHGACLYFHHSWNNWEQHAKSPFALIKDHVLLPQATLLKEVDAEFKAILIPEILEEIVNTIPVDWLQWEDTDETPEGLRNVYLQFLKTRLENSEIFVNQAQNAR
>CP030261.1|AXB57275.1|2721626_2722547_-|homoserine-kinase
MEIKLFCPATIANLSCGFDVLGLCLDNAGDEMIVRKVDQKGVRITKIVGADLPLETEKNVSGVAALAMLETLDELDFGFEIEIYKNIKAGSGIGSSAASSAGAVFGINELLGRPYSRKDLVQFAMQGEKLASGNAHADNVAPALLGGFTLVRSYAPLDIIRIDSPEELYATVVHPQIELKTSDARSVLKQNVSLKSAIMQWGNVGGLIAGLYTKDYELIGRSLHDEIVEPLRSVLIPGFDLIKQTAYENGALGSGISGSGPSIFALSRGKETADQIAKAMSEVYEKMNLPYEIHVSKINPDGVRIL
>CP030261.1|AXB57276.1|2722697_2725145_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MKVLKFGGTSVANAQNIKLVLEIINQKAKNERLVVVVSALSKVTDLLQSAAAKAAANDEDFRNIVAEIEKKHLDTLKELIPVSEQSSLLSHVKRIINHLETLLDGCFLLGELSPRTADTILSFGELLSSYIIAQAYQQVDKNAAYKDSRELIKTNADFGKAVVNFEVSNKLIQEYFASNESNINILPGFIAQTLDGITSTLGRGGSDYTAAIIAGALDADQLEIWTDVNGMFTANPKIVKQAQPIANISYQEAMELSHFGAKVLYPPTIQPVLRKNIPILIKNTFEPEAEGTLISDRVLTKDTVVKGISHIDHISLLTLEGPGMIGVAGSSRRLFEVLSQEKINVIFITQASSEHSICIGILNSDADNAEAAINRAFEIEISQNKIDPCYVEKDLCIIALVGENMKNHQGLSGRMFSTLGKNNVNIRAIAQGASERNISTVINERDVKKALNTLHENFFEENTKQLNLFVMGVGNVGEKFIEQIHSQKKFLKDNLKINVRVIALSNSRKMLFDEDGISLKEWQSALDNGETANAADFIARAKELNLRNSIFVDITANASVSETYEQFLKQSMAVVTCNKIACSSAYDNYKKLKSLSRQYNAPFLFETNVGAGLPIIDTVKNLIASGDKVHKIQAVLSGSLNFIFNNFDKNNSFHDVVKEAGLQGFTEPDPKIDLSGIDVARKILILIRESGYEMDIDAIANESFLPADCLATTNNEDFFASLIKHASHFEGIYNEALAKDSRLKYVAQFENGKASVGLQFIPKDHPFYNLEGKDNIVLFYTDRYVDQPLLIKGAGAGAAVTASGIFADVIRIGNN
>CP030261.1|AXB57277.1|2725782_2727297_+|histidine-ammonia-lyase
MREIHYISTETITLETLQEILSYNKTLELSEEAKVNVQKCRDYLDKKMALHSEPIYGINTGFGSLCNVKISNENLSKLQENLVKSHACGTGEEVPSEIVKMMLLLKIQSLSYGHSGVQLKTLERLVDFYNNDILPIIYTQGSLGASGDLAPLAHLSLPLIGEGIVLFEGKKTASAEVLKHFNWEPIVLQSKEGLALLNGTQFMSAYGAHILIKAYKYSYLADLIGTISLEGFDGRIEPFNELIHYIRPHKGQIITAQRINEFLEGSEIIAQEKKHVQDPYSFRCMPQVHGASKDAIDYVRKVFKTEINSVTDNPNIFIEADQIISGGNFHGQPLALALDFMAIALAELGSISERRTYQLISGQRNLPAFLVDNPGLNSGFMIPQYTAASIASQNKQLATPSSVDSIVSSNGQEDHVSMGANGATKALRVLDNLERILAIELLNASQAIAYREPLKSSDFIEMFLNSYREVVPLVKEDRILHNDIENTALFLESFQIENDLLTMA
>CP030261.1|AXB57278.1|2727345_2727990_+|DUF47-domain-containing-protein
MSINSIFQFLVPKDKKFFPLFEEASSNLIELASNLHEAVNLPLKEREVLFQKIDELEQRGEDITRQTNLELSRNFITPFDREDIHTLITSIDNVADYLHGAASRMRLYQVDKITKSIRKMTEINLEACQNIDSAVKELRNLKNFKVIKDACARINKLENKSDNVYNKAVFEIFENETDAKNIIKYKEVLSVLESATDKCKSVANILESISVKHS
>CP030261.1|AXB57279.1|2728020_2729361_+|inorganic-phosphate-transporter
MTLLILIIVLALIFDYINGFHDAANAIATVVATKVLTPFQAVLWAAFFNFLAYWVFGFGVADTVAKTADTMQIDLVVILAGVIAAICWNLLTWWLGIPSSSSHTLIGGFAGAAVAHAIAVHGFSGYVGPDGTTHHWYDIVSWYKAGKDGGMPSGVLIIIAFIVLAPLLGALASYLISIWLLNASRKSIGPKIFTVALMLVTIWFVYTQMIPYEEIIKDGHKPRFANSEFWSVALEPHNIKWLLVAFIVLTVSAFCLIFSSLNLHQADAALKKMQLLSSAAFSLGHGGNDSQKVMGIIAAAVVVYINTNPGVHMDPWLDVVLPSEDGAFKMPSWIPLACYSAIAAGTLSGGWKIVKTMGSKITKVSSFEGVAAETAGALTLYFTEHLKIPVSTTHTITGSIIGVGLTKRVSAVRWGVTVSLIWAWILTIPISALLAGLVYFVLSVFI
>CP030261.1|AXB57280.1|2729636_2730272_+|hypothetical-protein
MDAIFKTPLIFNGEEETVVLMYGNYIISKMTQADADFAIKNIDQRMFDESSFDSIIKVRNVVEYEFEPENDAAIMFGVANGGITSYETIDFKDVETTKNAEKSFGECFKQIGFRREEKQLTALKAAISPGIVTAFVGGLGAIITWLSYSFQDWEPSRTQRVKWFAYLFVKISKSVGYLPFLIITAVLTIICLFWMIKRMANPPLLVKAVKA
>CP030261.1|AXB57281.1|2730523_2731924_+|WG-repeat-containing-protein
MKKVIAISVLVVIMSITVIKICKFYRNENDDKNKELTVSAANFKMQSYKGWGLVDILGKNVTECKYDNIYHLNDKFYAVKFKEKWGIINNKGREITELIYDDVESIGENIFKAVSKGTCKIIGLSDKYNIALAKAGFDSCDLVSVYPSSLLRVERNEQADFLDDRGNIVSERKYDKIDILDIAYDADFISFSSGMIGVKLNLKYGFIDSTGKEVVKCKYDFAEAFKGDVTVALKDKNWFIIDKKGNEIKLSKKYSRVTQFVNGIAEVITNCSIDDINYQNAIYTEKPTCGYIDKTGKEIVPLIYYYECYADANSNANFAEGLALVCKNEKYGFIEKNGKHVIALKYQEAQPFVDGLALVKSNNKWGFINKKGKEAIAIKYDSSTDFLEGFAVVEINDKWGFVDKTGKEITSIQYDDCTSFSNGLAAVKLNNKWGFIDKKGKVKIPIIYDETRSFINGVACVKLIEE
>CP030261.1|AXB57282.1|2732283_2733804_+|hypothetical-protein
MMKKIITILLLVSTATFYAQEKDAIEQYKYGFIDIKTGKEITPFKYDKVYSFEKGGGVVKLDGKYGFINREGKEITPIKYDSVSNFDRRMAKVMLNKKYGIINREGKEITPIKYDEITYYSNELIEVRINEKYGIVNRDGKEITPLIYDRIIYSLGSLAVKVNNKFGFLNQQGEETTEKKYEQIGNPVNIGKISLTPALLNHKWSFFNNQGKEVFPVQYDTYEDLGDNSKLYKMMKVASNNRWGCINENLREVLPPKYDEIYFEQLSSIINIIKVRLNNKWGVFDMLGNELVTVECDEIEVYLGFIFVRIDGKWGAKSSDGKEILPPKYQQIAADGYNDLLVKINDKWGVVVATGEEILTPKYQDINHLYGSEFFAVKINDKWGVSKGTDQIVIPALYDEDFDYSDSTITATLKNKIIVFDKKGKVISKKRKVVRKDFPSNWCNFMNSNKPKEKQQQFASDFIKVKKNDKWILTDNEGGEVSFPIKHTNWKDSYNELICTVKVKIN
>CP030261.1|AXB57283.1|2734065_2735010_+|hypothetical-protein
MKKIVITTIFLSLVISVNAQKKKVASKPAASKTNVEKVSAAKGINENNYGAVIKYTNEIVSCLNNQHKEINDRDEYYRRWSDYFLDNKANSKNRVIYSPYIAYDLTKNNARCTKSSAPNFMEETDSTFYNENYSLLVGTFQKMALVWNDMASFSKPNIPNTDYGKKKCEELRDLLATYYETSEKLSLRNKELQKELFPYSVAKSPYKTAYIYLRNDMDAITDFVTICSNANNLKADSIKNALAELDASVTEHLLYANEHETPSNYKSFYDMANNSIVLRIKAKLNGKGLEVKDIEQLINNYNDGVVPAYNRAMN
>CP030261.1|AXB57284.1|2735072_2735588_-|DUF421-domain-containing-protein
MHFPYLDIIIRSVAVYFFMTIALRIFGKKELSQLNTADIILILLISNSVQNAMVGPDTSLIGGLVAALVLFVVNFVIKKLTRRYKGLNDLLMDKPEVLIHDGILDFKNLSRLDISHEELKEAAREHGLEHLTDIKLAMLEIDGTISIISGNKKQLNQTHYKRKHNHKNLRK

Crispr_ID: CP030261_5

• CRISPR_ID: CP030261_5
• CRISPR_location: 3546775-3546897
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP030261_5

Consensus_repeat	Method
AGAAATTAATATCTTTAGAAATTCCAAT	CRISPRCasFinder

spacers of CP030261_5

>5.1|3546803|67|CP030261|CRISPRCasFinder
TCCAATTGATGAAGAAATTAATATCTTTAGAAATTCCAATCTTTAAATTCCAAATTCCAATTGATGG

CRISPR arrays and Neighbor proteins around CP030261_5

CRISPR arrays

The CRISPR arrays of CP030261_5

>merge|CP030261|5|3546775-3546897|CRISPRCasFinder
AGAAATTCTAATCTTTAAAATTCCAAATTCCAATTGATGAAGAAATTAATATCTTTAGAAATTCCAATCTTTAAATTCCAAATTCCAATTGATGGAGAAATTCATATCTTTAGAAATTCCAAT

>CP030261|5|3|3546775-3546897|CRISPRCasFinder
AGAAATTCTAATCTTTAAAATTCCAAAT	TCCAATTGATGAAGAAATTAATATCTTTAGAAATTCCAATCTTTAAATTCCAAATTCCAATTGATGG
AGAAATTCATATCTTTAGAAATTCCAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP030261.1|AXB57946.1|3545050_3545653_-|hypothetical-protein	unknown	unknown	gnl|CDD|379310
CP030261.1|AXB57941.1|3539781_3540459_-|hypothetical-protein	unknown	unknown	gnl|CDD|377540
CP030261.1|AXB57940.1|3537773_3539552_-|30S-ribosomal-protein-S1	unknown	unknown	gnl|CDD|235775
CP030261.1|AXB57945.1|3543618_3544311_-|(d)CMP-kinase	unknown	unknown	gnl|CDD|234579
CP030261.1|AXB57943.1|3541346_3542075_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57953.1|3554260_3555070_-|M48-family-peptidase	unknown	unknown	gnl|CDD|320690
CP030261.1|AXB57949.1|3549796_3550351_+|RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274357
CP030261.1|AXB57948.1|3547079_3549533_-|endopeptidase-La	unknown	unknown	gnl|CDD|223542
CP030261.1|AXB57955.1|3557759_3559664_-|1,4-alpha-glucan-branching-enzyme	unknown	unknown	gnl|CDD|235445
CP030261.1|AXB59085.1|3559741_3561022_-|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179486
CP030261.1|AXB57954.1|3555154_3557554_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|376446
CP030261.1|AXB59084.1|3550364_3550898_+|anti-sigma-factor	unknown	unknown	gnl|CDD|226393
CP030261.1|AXB57951.1|3551958_3552690_+|DUF2807-domain-containing-protein	unknown	unknown	gnl|CDD|371327
CP030261.1|AXB59083.1|3544351_3544960_-|hypothetical-protein	unknown	unknown	gnl|CDD|379310
CP030261.1|AXB57944.1|3542175_3543552_-|MFS-transporter	unknown	unknown	gnl|CDD|340866
CP030261.1|AXB57939.1|3536975_3537497_+|biopolymer-transporter-ExbD	unknown	unknown	gnl|CDD|376792
CP030261.1|AXB57950.1|3550881_3551940_+|hypothetical-protein	unknown	unknown	gnl|CDD|372574
CP030261.1|AXB57942.1|3540603_3541329_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB57947.1|3545657_3546677_-|penicillin-binding-protein	unknown	unknown	unknown
CP030261.1|AXB57952.1|3552774_3554100_-|MFS-transporter	unknown	unknown	gnl|CDD|341035

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP030261.1|AXB57939.1|3536975_3537497_+|biopolymer-transporter-ExbD	gnl|CDD|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	9.56819e-14
CP030261.1|AXB57941.1|3539781_3540459_-|hypothetical-protein	gnl|CDD|377540	pfam05656, DUF805, Protein of unknown function (DUF805). This family consists of several bacterial proteins of unknown function.	6.84666e-30
CP030261.1|AXB57940.1|3537773_3539552_-|30S-ribosomal-protein-S1	gnl|CDD|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
CP030261.1|AXB57945.1|3543618_3544311_-|(d)CMP-kinase	gnl|CDD|234579	PRK00023, cmk, (d)CMP kinase.	3.3465e-114
CP030261.1|AXB57950.1|3550881_3551940_+|hypothetical-protein	gnl|CDD|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	0.00496979
CP030261.1|AXB57953.1|3554260_3555070_-|M48-family-peptidase	gnl|CDD|320690	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase. This subfamily contains peptidase M48C Oma1 (also called mitochondrial metalloendopeptidase OMA1) protease homologs that are mostly uncharacterized. Oma1 is part of the quality control system in the inner membrane of mitochondria, with its catalytic site facing the matrix space. It cleaves and thereby promotes the turnover of mistranslated or misfolded membrane proteins. Oma1 can cleave the misfolded multi-pass membrane protein Oxa1, thus exerting a function similar to the ATP-dependent m-AAA protease for quality control of inner membrane proteins; it cleaves a misfolded polytopic membrane protein at multiple sites. It has been proposed that in the absence of m-AAA protease, proteolysis of Oxa1 is mediated by Oma1 in an ATP-independent manner. Oma1 is part of highly conserved mitochondrial metallopeptidases, with homologs present in higher eukaryotes, eubacteria and archaebacteria, all containing the zinc binding motif (HEXXH). It forms a high molecular mass complex in the inner membrane, possibly a homo-hexamer.	2.05771e-89
CP030261.1|AXB57949.1|3549796_3550351_+|RNA-polymerase-sigma-factor	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.03203e-34
CP030261.1|AXB57948.1|3547079_3549533_-|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
CP030261.1|AXB57954.1|3555154_3557554_-|glycosyl-hydrolase	gnl|CDD|376446	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31. Glycosyl hydrolases are key enzymes of carbohydrate metabolism. Family 31 comprises of enzymes that are, or similar to, alpha- galactosidases.	0
CP030261.1|AXB59084.1|3550364_3550898_+|anti-sigma-factor	gnl|CDD|226393	COG3876, COG3876, Uncharacterized protein conserved in bacteria [Function unknown].	0.00887508
CP030261.1|AXB57955.1|3557759_3559664_-|1,4-alpha-glucan-branching-enzyme	gnl|CDD|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
CP030261.1|AXB59083.1|3544351_3544960_-|hypothetical-protein	gnl|CDD|379310	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain. This family is related to pfam03734.	2.07533e-43
CP030261.1|AXB57944.1|3542175_3543552_-|MFS-transporter	gnl|CDD|340866	cd06177, MFS_NHS, Nucleoside:H(+) symporter family of the Major Facilitator Superfamily of transporters. The prototypical members of the Nucleoside:H(+) symporter (NHS) family are Escherichia coli nucleoside permease NupG and xanthosine permease. Nucleoside:H(+) symporters are proton-driven transporters that facilitate the import of nucleosides across the cytoplasmic membrane. NupG is a broad-specificity transporter of purine and pyrimidine nucleosides. Xanthosine permease is involved in the uptake of xanthosine and other nucleosides such as inosine, adenosine, cytidine, uridine and thymidine. The NHS family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.1455e-162
CP030261.1|AXB57946.1|3545050_3545653_-|hypothetical-protein	gnl|CDD|379310	pfam13645, YkuD_2, L,D-transpeptidase catalytic domain. This family is related to pfam03734.	1.58344e-47
CP030261.1|AXB57951.1|3551958_3552690_+|DUF2807-domain-containing-protein	gnl|CDD|371327	pfam10988, DUF2807, Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).	1.7397e-49
CP030261.1|AXB59085.1|3559741_3561022_-|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
CP030261.1|AXB57952.1|3552774_3554100_-|MFS-transporter	gnl|CDD|341035	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.21407e-95

Protein sequences

>CP030261.1|AXB57947.1|3545657_3546677_-|penicillin-binding-protein
MLKQIVLFLMILICSASFGQVGGRYTYQFLNLTTSPRQAALGGDIITIYDEDVNQAMSNPALINADMDNHLAMNYGSYYGEASYGTASYAYTYDRHLQTFYAGVSYVNYGSFEGYDENGQATSNFTGSEGALTVGYSYNVPYTNFYVGTNAKLITSSLESYNSIGGAIDLGLLYLDEKNDLNFALVFRNLGTQFTTYSGIKENLPFEIVAGVSQELEHVPIRWHLTLENLQQWNISFSNPNRGETNIDGSTSQEKVSFFNNALRHVTFGVELFPKRAFNLRVGYNFRRGEELRVDEQRNFSGVSLGFGLKMNRLKFNYSYSRYTLAANTSLFGLILNFQ
>CP030261.1|AXB57946.1|3545050_3545653_-|hypothetical-protein
MKIFYLFLFVTVSFFTGSKLSFKEESAISTIEMERINSRIIDLKNMINVDHNYNQKIAFLIDMKVPSGKNRFFVYDLEKNVIIDQGLVAHGSGSETGIKGMLKFSNMPNSNCTALGRYAVGKTYRGIFGKAYRLAGLEETNNNAFKRAIVLHHYSAVPLEEQDYYISNSHGCPMVNEQFFKRIEKIIDGSKSNILMDIYY
>CP030261.1|AXB59083.1|3544351_3544960_-|hypothetical-protein
MIKKIIFVCIFIILAFAAYYLASNKRNENLTSLDKKRIESQVLEIKKFIKTNSRYNNRIAFFIDMKIPSGKNRFFVYDLKSNKIIDKGLVAHGSGSETGIKGKLRFGNVPNSLKTSLGKYSIGSNYIGKFGKAYKLYGLDTTNNNAFKRDIVFHYYYDVPYQEKDGYICNSYGCPMVNKKYFERIAKIIDSSESDILMSIYY
>CP030261.1|AXB57945.1|3543618_3544311_-|(d)CMP-kinase
MKKITIAIDGFSSTGKSTLAKQLAKELEYVYVDTGAMYRAVAYFAMQHNMIGSDFFDKKALIDALPNIQLEFRFNAEMGFAEMYLNGENVEKPIRTIEVSSFVSKVAEVSEVRSKLVEQQKEMGTNKAIVMDGRDIGTVVFPNAELKIFMTASAETRAQRRFDELQQKGDNVSYEDVLKNVIERDHIDTHREDSPLVIADDAIEIDNSYLNKEEQFAAVLELVNDVVKTI
>CP030261.1|AXB57944.1|3542175_3543552_-|MFS-transporter
MGIKNRLIVMSFLQFFVWGAWLITIGNYWFGTKNWEGTQFGLVFGTMGIASLFMPTLTGIIADRWVNAEKLYGGLHILYAVVLFAIAQVTTPDTFIAVMLLAMCCYMPTIALSNSISYTSLKLNNKNIVKDFPPIRVWGTIGFIVAMWITNLSGSKATEYQFYIAGIGALILGFYSFTLPKCEPQRLIKENATWIETLGLESFKLFGNYKMALFFVFSMFLGGALQLTNAYGDVFLDEFKHFPKYADSFVIQYSTIIMSISQVSETLFILAIPFFLRRFGIKQVMLISMLAWVLRFGLFAFGDPVQGLWMIILSCIVYGMAFDFFNISGSLFVESNTDSKIRSSAQGLFMMMTNGVGAVLGSLTSGWAIDRFFTKSFNSTIELAGFLQTDPANEKMAEFVKSQGNTISADGAFTNPVLMKDWHTIWLSFAIYALVIAIAFAVLFKHKHDPKEIENLSH
>CP030261.1|AXB57943.1|3541346_3542075_-|hypothetical-protein
MEKQQYLPPFESITSVTSKITSFGYGLTMIFGLIISVGLFVPIFFIRINEEILFGYIFIGIPLFLISFYYIKNTLSYTTIIIDSKGIKYFNKFKEKMVNEILWEDFESINKFEGSTYFLNRRTDSCYFNYDVASQVANRGKVLFYWFVRKNGMVSLHKETFHGKHIFSFFYTNRLDLVRSLLLGIRHFRPDLRIHPLAYGLHYINPKTFEIDYGRRTDAAVLACLIMIILAMALFFIILFAS
>CP030261.1|AXB57942.1|3540603_3541329_-|hypothetical-protein
MKKNKKCQLPPFEPITSIPLTLINYSFGGLFILPLVLLVASASIFLNENNVLAAVCITILLLVTTIFIIVHAVDVWKRIYTTISIDEKGIHYYNKFNKKVVKTIAWKNFVKKKTHTPGFGNDLYDITIEYPLRGIRAYFCFYILFNKEEVMIKEIFQGNHIFYAFYYNRIQLIRTFLLGVKHFKPELKISPTVFIKHFIDPETFVIQYGKRRLLFFYSTLLVVLFSLICFLIIFGIIFSRK
>CP030261.1|AXB57941.1|3539781_3540459_-|hypothetical-protein
MNWYLKVFRDYFNIEGRARRSEYWMFSLYNFSFATILFIIDAIFRLSLNFFPFGWFCILYAVTSFVPSIAVTVRRLHDVGKSGWMILLCLIPFFGGIWLFILLILNGDSQKNEYGENPKFESKDEDCSNADYIIQLVLISTLINVLIYKVVAEFINSEVFYKFYKSINYPSLLFWSIVPITLSFALKDKNKRLPFLILGSIYFLYTMKEVFDTLKELLYNWYLFS
>CP030261.1|AXB57940.1|3537773_3539552_-|30S-ribosomal-protein-S1
MSEQTKSQEEFLANFNWHNFQEGIDAVDEKNLQEFEELVSKTFIATDQEEVVEGVVVRITDRDVIVDINAKSEGVISLNEFRYNPNLKVGDKVEVLIDIREDKTGQLVLSHRKARTIKSWDRVIAANETGEIVNGFVKCRTKGGMIVDVFGIEAFLPGSQIDVKPIRDYDVYVNKMMEFKVVKINHEFKNVVVSHKALIEADIEVQKKEIIGQLQKGQVLEGVVKNITSYGVFIDLGGVDGLIHITDLSWSRINHPSEVLELDQKLNVVILDFDDEKTRIQLGLKQLNAHPWDALDANLTVGDKVKGKVVVIADYGAFIEVAEGVEGLIHVSEMSWSTHLRSAQDFVKVGDVVEAVILTLDRDDRKMSLGIKQLTQDPWTDITSKYPVGSKHTGIVRNFTNFGIFVELEEGIDGLIYISDLSWTKKIKHPSEFVNVGEKLDVVVLELDVEGRKLSLGHKQTTANPWDQYEDSFAVGTIHNGEISEIVDKGATVEFGDDIVAFIPTRHLEKEDGKKLKKGDTADFKVIEFNKEFKRVVASHTAIFREEEEKNVKAATENTSSNSTTNAPAATLGDNNDVLAALKAKMEKTEKK
>CP030261.1|AXB57939.1|3536975_3537497_+|biopolymer-transporter-ExbD
MKNLPKKIRSKKLNSRVDLTAMVSVSFLLIIFFMLVGELSKPKVLDLSAGNECCDCPVPHYGENRTFTIILGPNDKLIYYAGILAIPKIEPQITQYGKEGIRKKIETYNNAALKYAEQLGKTGRSISVIIKPAKKSNYGNLVDILNELKRANIDSYAIVPQFTPEETKLLAAK
>CP030261.1|AXB57948.1|3547079_3549533_-|endopeptidase-La
MSNHKILTIDNLSLQEFDSEAELIPLLTPEDEEEMNNEELPVSLPILPLRNTVLFPGVVIPISAGRDKSIKLINDANAGGKIIGVVSQINEEDEDPSKDDIHKIGTVARILRVLKMPDGNVTVILQGKKRFEIDEVVLEEPYMTATIKEVVEERPEENDSEFTAILDSVKELAIQIIKESPNIPSEATFAIKNIESQSFLINFVSSNMNLSVKEKQGLLSINGLKERALETLRYMNVELQKLELKNDIQSKVRFDLDQQQREYFLHQQMKTIQEELGGVSQEEEMDEMGLKAKTKKWDEKTQKHFEKELSKMRRMNPQSPDFGIQRNYLELFLELPWGEYSKDKFDLKFAQKVLDKDHFGLEEVKKRMIEHLAVLKLRNDMKSPIICLTGPPGVGKTSIGRSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTSNPVFILDEIDKLSSGNSGDPSSALLEVLDPEQNSAFYDNFLEMGYDLSKVMFIATSNNMAAIQPALRDRMEVIKMSGYTIEEKVEIAKRHLFPKQLEAHGLTAKDLTIGKKQLEKIVEGYTRESGVRNLETKIAQVIRNAAKSVAMEEEYNKKVTDEDIISILGVPRLERDKYENNDVAGVVTGLAWTSVGGDILFIESLISEGKGSLTITGNLGTVMKESATIALEYIKANAKKLGLGIELFQKYNIHLHVPEGATPKDGPSAGIAMLTSLVSLLTQKKVKKSLAMTGEITLRGKVLPVGGIKEKILAAKRAGIKEIILCHENKSDIDEIKAEYLEGLTFHYVKEMSEVLALALTDQNVKNAKTFK
>CP030261.1|AXB57949.1|3549796_3550351_+|RNA-polymerase-sigma-factor
MSQNNQNIEELIALCKNNNQKAQFEIYNRYCKAMYNVAYRIVKDEHFAQDVMQEGFLKAFTKINDYKQEVAFGAWLKKIIINYSIDFYKKNNAFQVEDLSKQLYKVEENDGIISENIDLDNLKVKQVLDAILQLKDNYRMVLTLFYIEGYDQEEICEILNITYANCRTTLSRAKDSLRRKLEEI
>CP030261.1|AXB59084.1|3550364_3550898_+|anti-sigma-factor
MKNEKDSLDKLFSRLENQWDVQELNSDHQVDFMQKLNKKEPKKKYWFMTAIAASIVLMLGISIFYKNEKPKEFKFASKETKRTDSIFNILIDNELVKLKEKSSPENEQIINDALKQMKTFDADYQKIINELQKNGENKQIIYAMISNLQTRISFLQTVLQRIEDNEKFKNTSNEKTL
>CP030261.1|AXB57950.1|3550881_3551940_+|hypothetical-protein
MKKHYNLLILFILIPFLGFSNDDAFITKQKNIKKTYIVNSNAGIDIDNKYGNITVSTWNEDKIDLDITIKVNGPNENWVNERLNSIDVDITALKGMVTAITNLGNSSLKSKGSNNSFEINYVIKIPKNGSVKLVNKYGNISTLSLEANTDINCKYGKVTLGKLNGSNNQIEIAYCQNSSIDYIKTGSIDAKYSGLKINDSGNLNLSANYTDVTLNEAQNIKYQCNYGTFKFQKINSLNGSGNYLTINVGEVSSSFSFDTNYSKINIGTMNEKAGNVSINSGYTDISLGYAPNYAFDFDVSARYSNIKHDNTLDISVSETKSNSKRISGFYRKKGQNKVNINSNYGNISLIKN
>CP030261.1|AXB57951.1|3551958_3552690_+|DUF2807-domain-containing-protein
MKKSILLLLLAVFLVNSNAKAQWSNNKVNGNGKIVTQTRTTGDYDGIKIAGSFDVDLVAGKEGKITIKGEENLLAVIKVEVEGNELKIYVEKGTQIRTSTGKKIEVIVPFDKISAVTLSGSGDIRTKNKISSDNLSAKLSGSGNFNLEIDTKNLDLALSGSGDVALKGRADSFTSKISGSGNVNAANLKSKNVEANVSGSGNSVVNCESSLTGKVSGSGNIKYLGNPEKRDVKVSGSGSISKG
>CP030261.1|AXB57952.1|3552774_3554100_-|MFS-transporter
MKNLQKGDKKLLNAWAFYDWANSVYTLTIASAVFPIFYEALFSDRDHYIDVFGLHLKNSALISFITAFAFLVVSFISPLLSGIADYVGNKKSFMKFFCYLGALSCMGLYWFDLDNIYVGLLFYFLGLLGYWGSLVFYNSYLPDIAFEEQQDRISAKGYSLGYIGSVILLIVNLAMIMKPKLFGITGTDGEAAMKAMRYSFIMVGVWWILFSQYTYYYLPKGSKETGQKLTKSVIFNGFKELKKVWALLQENIPLKRYLGGFFVSSMAVQTVMLVATYFGAQEIQWSSKEESTIGLIICILIIQLVAVVGAVLTSRASAKFGNIPTLIVINIIWAVFCALAFFITLPMHFYVMATVAGFVMGGIQALSRSTYSKLLPETEDTASFFSFYDVAEKIGIVIGMCVYGIIDQITGSPRAAIVILGIFFVTAIFLLRRVHKKDVSN
>CP030261.1|AXB57953.1|3554260_3555070_-|M48-family-peptidase
MKKYFFLGIFGALAMACATNPITGKQNLNFVSNSELFPSSFQQYSQFLSENKVVTGTADAKLVETVGYKIKLAAEKYLTYLGQSQYLKDYRWEYKLVDNKEVNAWCMPGGKIVVYSGILPITQNEAGLATVMGHEVSHALANHGAQRMSAAQLQQIGGVALDAATSGKSESTRQIFSQAYGLGSEVGVMLPFSRSNESEADKIGLTLMAIAGYNPDDAIAFWTRMSAKSGGAGTPEFMSTHPSDATRIANIKSLIPEAKATALKVGTIK
>CP030261.1|AXB57954.1|3555154_3557554_-|glycosyl-hydrolase
MITNTSLEYKGDLYPSKIVSYEHEGDSIFFNTDNKVILKVTILRDSLIRFRFTTKGYFSNDFSYAIDKTQLHGYNFLELTEEETFFQIRTSKVKCKIQKADLRLAIYDLNDFLILEDELGFHWEESYEYGGNIVKMSKFSKDGECYYGLGDKATQMNLKGKRVENFATDQYAYQKDQEPLYKVVPFYIGLHNKQSYGIFFDNTFRTFFDFCQERRNVTSFWAEGGEMNYYFFYGPQMQDVVTSYTDLTGKPELPPLWVLGYHQCKWSYYPESKVKEITSKFRELQIPCDAIYLDIDYMEGFRCFTWNKNYFPDPKKMVAELAEDGFKTVVIIDPGIKIDKDYWVYQEALEKDYFCKRADGPYMKGKVWPGECNFPDYTNPAVREWWAGLFKELVSEIGVKGVWNDMNEPAVMEVPNKTFPMDVRHFYDGNPCSHRKAHNIYGTQMARATYHGVKRFTYPKRPFVITRSAYSGAQRYTSSWTGDNVATWEHLWIANIQVQRMSISGMGFTGSDIGGFAEQPTGELYARWIQLGVFHPFCRTHSSGDHGNQEPWAFDEEVINITRKFVSLRYQLLPYLYTMFWQYIEEGLPMLKPLVYYDQDDTQTHYRNDEFIFGNQILVCPILEPNAVGRRMYIPRGEWYNYWTNELFIGGREIWIDIKFDEIPVFVKAGAIIPKYPVQQYVGELEFDELTLDVYFKNGKEKSVVYEDAQDGYDYKKGRYSFLSLRTIGKEKELIIQLHKEGKYDTPYSKYKINLIGLPFKVSEIEIDNEKIEFDKINFEQNNFLIVDKEFNELHIVGE
>CP030261.1|AXB57955.1|3557759_3559664_-|1,4-alpha-glucan-branching-enzyme
MTKVITHSLFTDFDIDLFKAGKHFKLYEKLGAHLIEVNGVKGVYFAVWAPTAHSVSVVGDFNYWTQGEHNLNVRWDSSGIWEGFIPDISKGALYKYKIQSNIGGIVTEKADPFALYCEKPPHTASVVWDLDYSWKDENWMQNRQQFNALDKPYSVYEVHLGSWKRAEHNRFLSYLELADDLVKYVKETGFTHVEFMPIMEYPYDPSWGYQLTGYFAPTSRFGKPQDFMVLVDKLHQEGIGVILDWVPSHFPDDAHGLGYFDGSHLYEHPDRRKGYHPDWKSLVFNYGRNEVRAFLISNAVFWLQNYHVDGLRVDAVASMLYLDYSRKEGEWEANIFGGRENLDSISFLKEFNEVIYANFNGVQTIAEESTSFPMVSRPTFTGGLGFGMKWMMGWMHDTLKYFQKETVYRKYHQNDLTFSMTYAFTENFMLPFSHDEVVYGKKSLNYKMPGDEWQRFANLRLLYGYMFTHPGTKLLFMGAEFGQTSEWNFEQSLDWHLLQYDFHSGIKRLITDLNQLYKSHPALYEKQFTGDGFEWINYSDHQNAVLSYIRKGNNPDENVIVVCNFTEVIRENYRIGIPKKGKLEEIFNSDALIYGGGGVGNRKSLKTESISYDGRDFSVELILPPLSVTVYSFV
>CP030261.1|AXB59085.1|3559741_3561022_-|glucose-1-phosphate-adenylyltransferase
MKFKKKNVVAIILGGGQGSRLFPLTETRSKPAVPIGGKYRLVDIPISNCINSDIFKIFVLTQFNSASLNAHIKNTFNFSIFSQSFVDILAAEQTPDNPTWFQGTADAVRQCMSHFLKHDFDHALILSGDQLYQMDFNEMLEAHIAADAEISIATLPVNAKDAPEFGILKTDHENNIHAFIEKPHASLLPEWESEVSEHMQEKGKKYLASMGIYIFNKSLLVELMGDQETKDFGKEIIPQAVGKHKILSYQYEGYWTDIGNIESFFEANIGLTADIPEFNLFDNENKIFTRPRLLPPSKFRNSIINQSLISEGCIINAKEIKSSVIGIRSRIEEGTVLENCYVMGNDFYQDLDELNYESGINKIHVGIGENCFIKNALIDKNVRIGNNVHISGGKHLDNFTNELYSIKDGIVVIKKGVTLSDNFRIE

Crispr_ID: CP030261_6

• CRISPR_ID: CP030261_6
• CRISPR_location: 4015682-4015805
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP030261_6

Consensus_repeat	Method
CGTCTCTACAGAAAAACCTTTGTCACTTTGAACCT	CRISPRCasFinder

spacers of CP030261_6

>6.1|4015717|54|CP030261|CRISPRCasFinder
TTGTTGCTTTGAACCTCTCAATTTCGATATTCTTTGCGAAGACGCACTGCTGTG

CRISPR arrays and Neighbor proteins around CP030261_6

CRISPR arrays

The CRISPR arrays of CP030261_6

>merge|CP030261|6|4015682-4015805|CRISPRCasFinder
CGTCTCTACAGAAAAACCTTTGTCACTTTGAACCTTTGTTGCTTTGAACCTCTCAATTTCGATATTCTTTGCGAAGACGCACTGCTGTGCGTCTCTACAGAAAAACCTTTGTCGCTTTGAACCT

>CP030261|6|4|4015682-4015805|CRISPRCasFinder
CGTCTCTACAGAAAAACCTTTGTCACTTTGAACCT	TTGTTGCTTTGAACCTCTCAATTTCGATATTCTTTGCGAAGACGCACTGCTGTG
CGTCTCTACAGAAAAACCTTTGTCGCTTTGAACCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP030261.1|AXB58260.1|4014655_4015399_-|rhamnogalacturonan-acetylesterase	unknown	unknown	gnl|CDD|238859
CP030261.1|AXB58265.1|4022598_4023822_-|glycosyl-hydrolase-family-88	unknown	unknown	gnl|CDD|369381
CP030261.1|AXB58263.1|4019517_4021107_-|glycoside-hydrolase	unknown	unknown	gnl|CDD|350115
CP030261.1|AXB58258.1|3999774_4007043_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB58252.1|3988690_3990667_-|hypothetical-protein	unknown	unknown	gnl|CDD|143586
CP030261.1|AXB58251.1|3987560_3988568_+|hypothetical-protein	unknown	unknown	gnl|CDD|225117
CP030261.1|AXB58268.1|4025841_4027515_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl|CDD|369630
CP030261.1|AXB58257.1|3998511_3999636_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB58259.1|4007489_4014065_-|hypothetical-protein	unknown	unknown	gnl|CDD|372639
CP030261.1|AXB58262.1|4017301_4019302_-|pectate-lyase	unknown	unknown	gnl|CDD|312856
CP030261.1|AXB58269.1|4027527_4030659_-|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl|CDD|274948
CP030261.1|AXB58256.1|3996635_3998390_-|hypothetical-protein	unknown	unknown	unknown
CP030261.1|AXB58270.1|4030692_4032138_-|glycoside-hydrolase-family-28-protein	unknown	unknown	gnl|CDD|227721
CP030261.1|AXB58261.1|4015833_4017189_-|glycoside-hydrolase-family-28-protein	unknown	unknown	gnl|CDD|227721
CP030261.1|AXB58266.1|4023827_4024793_-|DUF4861-domain-containing-protein	unknown	unknown	gnl|CDD|379779
CP030261.1|AXB58253.1|3990691_3991609_-|hypothetical-protein	unknown	unknown	gnl|CDD|371704
CP030261.1|AXB58254.1|3991645_3992965_-|hypothetical-protein	unknown	unknown	gnl|CDD|372639
CP030261.1|AXB58255.1|3993106_3995494_-|hypothetical-protein	unknown	unknown	gnl|CDD|379398
CP030261.1|AXB58267.1|4024805_4025744_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223730
CP030261.1|AXB58264.1|4021352_4022576_-|glycosyl-hydrolase-family-88	unknown	unknown	gnl|CDD|369381

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP030261.1|AXB58260.1|4014655_4015399_-|rhamnogalacturonan-acetylesterase	gnl|CDD|238859	cd01821, Rhamnogalacturan_acetylesterase_like, Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.	5.53129e-83
CP030261.1|AXB58265.1|4022598_4023822_-|glycosyl-hydrolase-family-88	gnl|CDD|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	1.06319e-104
CP030261.1|AXB58263.1|4019517_4021107_-|glycoside-hydrolase	gnl|CDD|350115	cd09001, GH43_FsAxh1-like, Glycosyl hydrolase family 43 such as Fibrobacter succinogenes subsp. succinogenes S85 arabinoxylan alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been annotated as having beta-1,4-xylosidase (beta-D-xylosidase; xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. This subfamily includes the characterized Clostridium stercorarium F-9 beta-xylosidase Xyl43B. It also includes Humicola insolens AXHd3 (HiAXHd3), a GH43 arabinofuranosidase (EC 3.2.1.55) that hydrolyzes O3-linked arabinose of doubly substituted xylans, a feature of the polysaccharide that is recalcitrant to degradation. It possesses an additional C-terminal beta-sandwich domain such that the interface between the domains comprises a xylan binding cleft that houses the active site pocket. The HiAXHd3 active site is tuned to hydrolyze arabinofuranosyl or xylosyl linkages, and the topology of the distal regions of the substrate binding surface confers specificity. It also includes Fibrobacter succinogenes subsp. succinogenes S85 arabinoxylan alpha-L-arabinofuranosidase (Axh1;Fisuc_1769;FSU_2269), Paenibacillus sp. E18 alpha-L-arabinofuranosidase (Abf43A), Bifidobacterium adolescentis ATCC 15703 double substituted xylan alpha-1,3-L-specific arabinofuranosidase d3 (AXHd3;AXH-d3;BaAXH-d3;BAD_0301;E-AFAM2), and Chrysosporium lucknowense C1 arabinoxylan hydrolase / double substituted xylan alpha-1,3-L-arabinofuranosidase (Abn7;AXHd). A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	5.24004e-131
CP030261.1|AXB58264.1|4021352_4022576_-|glycosyl-hydrolase-family-88	gnl|CDD|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	2.61212e-109
CP030261.1|AXB58252.1|3988690_3990667_-|hypothetical-protein	gnl|CDD|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	7.79938e-32
CP030261.1|AXB58251.1|3987560_3988568_+|hypothetical-protein	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.22744e-09
CP030261.1|AXB58268.1|4025841_4027515_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl|CDD|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	1.5634e-41
CP030261.1|AXB58262.1|4017301_4019302_-|pectate-lyase	gnl|CDD|312856	pfam09492, Pec_lyase, Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.	2.95837e-157
CP030261.1|AXB58269.1|4027527_4030659_-|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl|CDD|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
CP030261.1|AXB58259.1|4007489_4014065_-|hypothetical-protein	gnl|CDD|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	4.01031e-31
CP030261.1|AXB58270.1|4030692_4032138_-|glycoside-hydrolase-family-28-protein	gnl|CDD|227721	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane].	3.84777e-92
CP030261.1|AXB58261.1|4015833_4017189_-|glycoside-hydrolase-family-28-protein	gnl|CDD|227721	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane].	3.84863e-69
CP030261.1|AXB58266.1|4023827_4024793_-|DUF4861-domain-containing-protein	gnl|CDD|379779	pfam16153, DUF4861, Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding.	1.5498e-57
CP030261.1|AXB58253.1|3990691_3991609_-|hypothetical-protein	gnl|CDD|371704	pfam11751, PorP_SprF, Type IX secretion system membrane protein PorP/SprF. This entry describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Cytophaga johnsonae (Flavobacterium johnsoniae), that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss of the rapid gliding phenotype.	4.20644e-101
CP030261.1|AXB58254.1|3991645_3992965_-|hypothetical-protein	gnl|CDD|372639	pfam13585, CHU_C, C-terminal domain of CHU protein family. The function of this C-terminal domain is not known; there are several conserved tryptophan and asparagine residues.	1.0414e-30
CP030261.1|AXB58255.1|3993106_3995494_-|hypothetical-protein	gnl|CDD|379398	pfam13884, Peptidase_S74, Chaperone of endosialidase. This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, pfam12219. The endosialidase protein forms homotrimeric molecules in bacteriophages. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and presumably bind to DNA.	1.60811e-16
CP030261.1|AXB58267.1|4024805_4025744_-|alpha/beta-hydrolase	gnl|CDD|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.59209e-24

Protein sequences

>CP030261.1|AXB58260.1|4014655_4015399_-|rhamnogalacturonan-acetylesterase
MKKYILLTFLITTISFAQKTSVYCIGDSTMANKKDPEKNPEHGWAQVLQPFFKDNIVVINKAVNGRSTKSFINEKRWDSIYKKLKKGDYVLIEFGHNDEKIEDSTRYTNPHTSYRYNLIRFVQESREKGAVPILLTSIARRNFNDKGVLVPTHGDYPLETRLVAQEYKVPFIDLEYYTELLEQSYGPEKSKQLHLHYKAGENPYYDKDKADDTHLSLKGAAAIAQIVINQIKGLEGASIQKLKAGIK
>CP030261.1|AXB58259.1|4007489_4014065_-|hypothetical-protein
MRLKITFLVLFLISPILSFTGYSIFAQSVSGAASNTGCQNSGIVTASSVGLGATPQYQLLRSGTVVAPVPGDGTQFTNDPVFTGLITGSYVVNARASTGGTVYSSTTIAVTDGYTPMVVTTPTKVAGCVGGNAVLTATVTAGKSPFTYTIATQAAPGTILQSSGSIAASTFTFNGLPANSYVVSVTDSCGQTVIGATAITNPTLTLNDIKLGYIAYPGYLPAYNCSAPLNIINSANFRYITTNTILSTADAANFTWKVKYQGQLYGKDTDGDGFSDVGGAGYPSSQSSIGMPAIATRAGIEADLANMRAVLIDNCGNTKEFPISLNYNAITSTNCGGSGIIRIGPSTLACLPIDMTFTNTANAADVITGTLTTSSGIFTGFTAGATYHVTYIDAGGNTTGDFSLPVSQNLTIPAAPNITLTQYASSANANYLGYGTLSINVSPFQVGDAISYVVTASNNSLVPIGHSGNITLDGAGYANFPKVNASDPTGTWPKGNYTLDITTACGTKSINVTVAGYAATVSESNTITSVCGGFNYVMNGTFDVPSAYQVIIFSGPSSVGQTRDLASATASLPFNGLSYGTYVFALRTKSGSLNLLTQTFTYDANNAIIVDKTNTGGYVCASGATNGVLTITATSISPPPGNVLQYALSTDGGVNYGPYQNGNTFSGLTDDTYFFRVKDDCGNIITQSAQIGVAAAPTITADGIATPATVCNAGSGTIQLDVDVLGAVSYLWAGPGINAGNQNVKDPIINYADLLVGANNITATVTFGAPCNSSTVSNLTINVNPLPTIAITNPAGVCAPNSVDITSAAITAGSDAGLTYTYFSDDIGTVPVADPAAITVADTYYIKGTNVNGCSSISPVVITINDLPLASINYLATPYCKTGTAVVEEIGIAGGTYSSDPDLIINTATGEIDLAASTVGDHTVTYTFNDGSCSNTTTTVITINALPTAAISYPNTPYCQAGTAVSTEIGILGGAYSGDAGLSIDEITGTIDLAGSTAGNHTVTYFFSDGTCSNSTTTSIVINPVTLPSALSNINAQCEATPTAPTLTDICAGTITAATTTVFPITTQGTTVVTWTFDYGNGYTQSVNQNVIIEDTFSPVMPILSDVTGQCEATPTVPIASDACTGAVTGVTTTPFPITAKGTTVVLWTFDDGNGNTSFANQNVTIIDTTAPTAPVLTDLTGECSVTPTAPTTVDNCDSAAITGTTSTSFPITAQGTTTVTWNFTDSSGNTTTVNQNVIIDDVTPPAVPVLANVTGECSATPAVPTTVDACSGTITGTTSTSFPITTQGTTAVTWSFDDGNGNISTAVQNVTIQDTFSPVMPILADVTGQCEATPTVPIASDDCAGAITGVTTTPFPITAKGTTVVLWTFDDGNGNTSFANQNVIITDTTPPTAPVLTDLTGECSLIPTAPTTVDNCDSGTITGTTSTSFPITTQGTTIVAWNFTDSSGNTTTVNQNVIIDDVTPPTAPILADVTGECSVSPAVPTALNACSGVITGSTSTIFPITTQGTTAVTWSFDDGNGNIATAVQNIIIDDVTPPVVPVLADVTGECSVSPAVPTALDACTGVITGSTSTIFPITTQGTTVVTWSFDDGNGNIATAVQNVIIDDVTPPTAPILAAVTGECSVSPTIPTALDDCAGIITGSTSTIFPITTQGTTVVTWRFDDGNGNIATAVQNIIIDDVTPPTAPILAAVTGECSVSPPIPTALDDCAGTITGSTSTIFPITTQGTTVVTWSFDDGNGNIATAAQNIIIDDNTPPAVPVLADITGQCSVTPAAPTTTDACSGLITGTTTAAFPITAVGTTIVTWTFSDANGNSVTANQNVIISQIALAGTETAVCSTANAGYTITLSVNGQAPYTAAGTGAPGTWSGNIWTSGLISAGTNYSVNLQDASACNTVTVAGVSPNCCSFNVTCPTFQPLTVSCYDEVPSQVSLTEAQFEALGNGDGQIAETNCGVIEITAANSPDPGCNANVTRTYTVTEYDDANRNGLRDAGENTILNTAICTQIIQVHDTTAPVFTETPPPAVINADCDTIPAAPAFTATDNCGSAAVSYDETRVDGDCSSRYTLIRTWTASDQCGNQNSLVQTINVSCVEEIYNAISVNGDGLNDSFVIKGIDCYPENVVKIYNRYGVIVYERNGYDNVTNPFEGFSDGRATIARGNKLPAGTYFYTLEYDSNGRKIEKAGYLYVSSQ
>CP030261.1|AXB58258.1|3999774_4007043_-|hypothetical-protein
MKNRLLPLLFVLGSFSAYSQVVVGKKDPTSYSAQLEVFATNKGILIPRVALTSSTDTTTMSDGNIDSLLLYNTTSGSDIKPGYYYWYVDRWHRLAVSGEASGIAGGNGAPGIKGDPGYPGEGVTFYTDNSTGNVYVQNPDGTWTAINGKNGIDGRNGISGGNGLPGTKGLDGTIQMYIDYSSGIVYVRDPKDNTKWVPLNGEDGIDGIPGVDGSPGTAGSITTLDAIVVDPKGDIYAYVGTDKTVKGRDDAWRDRTADWVKINGLDGSDGIAGGPGVPGIDGVSAPSNATVWVDSKTGYVYVKDPATGKWVKVTGNDGIPGVDGSPGTAGSITTLDAIVVDPKGDIYAYVGTDKTVKGRDDAWRDRTSDWVKINGLNGENGIPGANGAPGTAGSITTLDAIIKAPNGDIYAYVGTDKTVKGRDDAWRDRTADWVKINGLDGSDGIAGGPGVPGIDGVSAPSNATVWVDSKTGYVYVKDPATGKWVKVTGNDGIPGVDGSPGTAGSITTLDAIVVDPKGDIYAYVGTDKTVKGRDDAWRDRTSDWVKINGLNGENGIPGANGAPGTAGSITTLDAIIKAPNGDIYAYVGTDKTVKGRDDAWRDRTAEWVKINGLNGANGIAGANGAPGTAGSITTLDAIIKAPNGDIYAYVGTDKTVKGRDDAWRDRTADWVKINGLNGSDGIAGGPGVPGIDGVSPPSNATVWIDSKTGYVYVKDPETGEWVKVSGNKGDKGDKGDKGDKGDSAYEIWQGLPGNDGKSYDEFLDGLKGATGATGASAYEIWQGLPGNDGRSYDEFLEGIKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEDWKAIPGNDGRSYDEFLNGLKGATGATGASAYEDWKAIPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEDWKAIPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEDWKAIPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEIWQGLPGNDGRSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWKAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEDWIAIPGNDGKSYDEFLNGLKGATGATGASAYEEWKTKEGNATKTYEDFMDSLKGVGGKVTQGANIVITGAGTDDDEYVVNAIIPQQAIDEFTAAAGDSSFELSAEPSALSKVKLYINGVRIDKDAISVSGKTVTYIPANNGSYVLMANDNVMIDYLK
>CP030261.1|AXB58257.1|3998511_3999636_-|hypothetical-protein
MAQTETVVTPNGKKVTFYPGAPGTADNGLTITSGNIQLGGALTKPSILTTTSAYTLAILGLQTGTSTDDLVVTDANGVLRKIAPSNLITKYDLSSTTPNTVLEVNGLGAALAAASVNIKPSATVGEVLTTTATGVVGWKKPAVDAGDITTKADLTSSTPSVLTVSGTGATLINATVGIKPSENIDEVLTTGPGGVVGWKKVGAGDITAKADITTNTPSTVLQVSGTGATLVAASVDIKPSVNVGEVLTTTEAGVVGWKAAAASNLMEIKKISSNYTVTTADYTIIASKLTGDITISLPDATANKGRILVINQFNTLLADGKTPVIVNFNKSVIYSDSVSLPYLAGSIFEGATAGSAKVTLQSDGTDWYVITYNM
>CP030261.1|AXB58256.1|3996635_3998390_-|hypothetical-protein
MVQSFAQVNGTVVIGGKQKGDDHATLEILSNNGTKGMMPPRATTAQITAMESGLTEDSKGLVIYDTDQNCLKTWLGTTWSQCNDRAEYTYVSGSIEGEFYEDTPVDGRNFIKIKINVTKPGLVCFGTYDFEALHDIMIISNPMYVKMTGEQELKLFLGGSPKTAGTEIILTDYYAFKDGELPDLARFNIDELKPKRIVEVPAEYTFVSAEAVGDYAIGVPVNSRNNYIKLKLNVTKTGLYDIGMPVIKSVQYDDYTDKDLLINTQGVFNETGEQEILLTVAGVNNNSNYKRQYPYIYNNYNVQIEDNKATIEVIGQVDINFNNFNAIDRALYKITDIGPVQGEYYWGVPLTGSNYMVATVNVTKPGTYNLGSIDVTNTSDDERNRFVERENFVKFRAMGTFHTVGMHKVLLQGSGITFKNILATDAQEFLILDIFDSRAIVDIMTELEEEGRADMLNVLVHFQEKPLKYKTAKCTFSATSIHGNYVKNSPLDSSHYIKVAVNITEPGLVHFTGQNNTSATNHVTFDSGLVYFDSVGTKEVILYGKGVFDGTNNNVDVYDVNNSVPLVDQYKILGFLETVSFTVN
>CP030261.1|AXB58255.1|3993106_3995494_-|hypothetical-protein
MKHFKDGIIVILALFGFYSAQAQVGVGTLTPDNSAQLDITSSNKGVLMPRVALTKTTDQSPVTGVIAKSLLVYNTATVNDVTPGFYYWDGSKWSRMIAGNDPIQFTETLTTLHYDNTNNQLTYIDEKGVSNVLQLLSQAGPQGMQGIQGIPGAVGPQGPQGEQGATGLQGEQGAAGPQGPQGEQGVAGPQGIQGEPGLTGPQGIQGEQGAAGPQGPQGEQGAAGPQGPQGEQGAVGPQGPQGEQGAAGPQGIQGETGAAGPQGIQGETGATGPQGIQGETGATGPQGIQGEQGVPGPQGIQGIQGLQGEKGEAGAPPTIGAGSVTSSNLITVTNGANNAFKDTEISLTAGTAGQIMQTVGTTPTWVDAPLAVKEPWFNTATNKQATENTQNIYQMGNIGIGTAFPNAPLQFENVFANRKIVLYQNGNNDNMVYGLGVNNAQFRLQVPTTANGFSFNAGTGATGSKELARIYGNGKMHVANAIIVDADGISDGTLSPANSGLVFGSVSSQVGISSNRTSVVSGSNRFGLDFWTENVKRMSINTVGNVGIGTTAPDTRFNVEGGISHFRNDGKQLVVENSTSTDGSNELIFKAGTTGYYLGTAIGGTSGNNFSIARARYMNPNLAISPGVATRIFQIDGTTNNFSIGDGLPTADKLTVYGTISCVDANGTAFNVTSDRRYKKDIAPITDALSIVERVQGVSYNWRKEEFKEMNFNDKHQLGVIAQDIEKILPEAVSKNDQGFYTVNYTMLIPVLVEAVKEQQKEISTSNAAIKELQNNQAMQQKEIEELKALIKNLK
>CP030261.1|AXB58254.1|3991645_3992965_-|hypothetical-protein
MENKDLYKVKLSDFKMVNKRGSYALGLFAGLFTCNIMNAQFVNSGEVKIADNTIMAIYMDYNNETSGNFINDGQTYIFQNWNNDGKVGYTPAGNGQTFFTGQQSQSIEGSKQSDFQNVIFDNMSALVPFNLKTMISVGKNSDFKNGIINAFYAETDQLHDKSKMIFLENANHTAAGDQSFVDGRVEKRGNAEFYFPVGNELFYRPSYHAVNGSAANVYTTQYFYQNSDPAYPHSNKDESILKINDKEYWKISQDQGSEKIVLSLTLDHDTTPSDYFQQNSDTELAIVRWDESLNKWVNEGGVLSADITGEAYEKLLTAQVSGYGIFTMAVVKKTEDPVEDVVVYNALSPNDDGVNDTFHIKGISEYPDNTVEIYNRWGVKVYDTVSYNESDNMFRGYSDGRVTVKRGDKLPTGTYFYILKYNVNGKGKEKTGYLYINNQ
>CP030261.1|AXB58253.1|3990691_3991609_-|hypothetical-protein
MKKIFYVITIFVLGAFEVSAQQESQYTQYMYNTMTINPGYTGTRGLPSIFGLYRTQWVGLDGAPKTANFSIEAPISSNGQGLGLSVISDKIGPSQETTLTASYAYPIQLSADVHLSLGISASGNFMQIDYNKLNVERPEDHFLSGNLTKNSPNFGAGIYFHSSKWYAGLSVPMILETKFYDDVKTSVASQRMHFYAMGGYVFDLNDNLKFKPAAMVKMVSGAPLAVDLSANFLISEKLTLGAAYRWDAAVSAMAGFQVTSGLNVGYAYDYDTQKIGNYNSGSHEIFLRFDLFSGTKYRLVTPRFF
>CP030261.1|AXB58252.1|3988690_3990667_-|hypothetical-protein
MISKKIKTALALLCICLVQMQGINAQNKKAAKADEVYNKFAFIEAGKLYKSLVDKGDTSTEVYTKLGNCYYFNGQSPEAADSYAKVFNSGKSVTPEFYFRYAQALNNSKKYNEANAVMKKYYAVTGKKDLSENWKEQKLMADIQKQSGRYDIKPVSLNSPVSDFGTSFDGKDKVMFASARDSGVIIKRKHSWNEKSFMKIYTANVTADGDLEDAAPVKGDINTKYHQSSPAITKDGKYMYFTRNNYMDGKLGADKNGTNFLKIYVAENVKGEWKNVKELPYPINSDGFSSAHPALSPDETQLFFASDRNNSFGNSDLYVVSLKKGNLVGNDVTKLSDEINTPGRETYPFMDKKGILYFASDGHPGLGGLDVFAAMKDQAGIYHVVNVGDGINTPEDDFAYVINDSKKGYFSSNRTGNDDINRFVENKPVIFDFDIRSIIFGTIAENGKPLPDLKVEVFDSNNASIATGVTDNQGNYKVFVDPYQNYRVVYSKPLYAEKTVNAEQLKPLEKREISFELTKEVEVIVDGETVKIKDGDDLTDKLKLNPIYFDLNGYNIRQSSKKELDKVVALMKDRPNISIKVNSYTDSRGRDEFNMKLSQNRAKSTVNYIIKAGIEKERISGEGFGETHLLNHCSNGVKCSENEHELNRRSEFIISFSK
>CP030261.1|AXB58251.1|3987560_3988568_+|hypothetical-protein
MRKITHHYTLTPEWQLKVVEQLNTKLIDNKLINVPNDIGKGFFYFSPIMEGISVVYADLTVTTPLKITRLKSDNELFIFHFDLSKHTNMVKINHLDYEIGSFNQLDLIILDNNIESSITPVLNERTIALRLLIDKKLLQDFIRKINEKENYFSKSKTNKKAFYHYGSVDSNSILLIQSITSKSVNDLSFDSFIKGISLKVLGNFFNKFYSTVDEDTQVTDLENKSLEKTKEYLLNNLYGPFPSLTFLAGMAGMSDSKYKSLFKKRFSNTPKNLFITEKMNLAQKLLKSGEYSTLTAVMYELNYTKLNYFCSKYFEQLKTKATDDFVKKNQKDQKK
>CP030261.1|AXB58261.1|4015833_4017189_-|glycoside-hydrolase-family-28-protein
MNSKYLLLLFFTWVSFSQNSDFPSERVDSIVKRIQLPVIPAYQINVLKLGAKGDSITNNKKVFDKAMALCKKNNGGTIIVPKGIYKINGPIHFVSNVNLKIEKGAKIKFSDNPKDYLPMVLTSWEGTMLYNYSPLIYAESCTNIALTGEGVIDGEGGKTWKTFKAKEGEGKNRSREMNHNSTPISERKFGEGYFLRPQMIQFLNCKNILVENIRIENSPFWCLHLLKSESITIRGISYKSLNHNNDGIDPEYAKDVLIENVNFDNGDDNVAIKAGRDHEGRANTATPSENIVIRNCNFKGLHGVVIGSEMSAGVRNVFVENCKTAGYLKRGIYLKTNADRGGYIKDVFVRNIKLDEVEDCLYMTANYHGEGKGFQSDISNVHFSNITCKKASESGIVIQGFADKKIRNISLRNIEIKSAKNALSNENAENVVMTDVFIGQRAGVPSAVSKP
>CP030261.1|AXB58262.1|4017301_4019302_-|pectate-lyase
MILLKKTSLLFILFWSIGMTAQNTYKNWSEIIRKSDASWFASAEAKKIAENVLLYQRDIGGWPKNIQMQQELNEKQKKDLIALKKTAVETTTDNGATCQEMLFMSKMYAQVKDERYAASFLKGLNYLLEAQYANGGWPQFYPLKKGYYTHITYNDDSMVNILNVIRAVADQTDYYSIKPSKEVVEKCKKSFDKGIDCILKTQYKQNGVLTAWCAQHDEVTLAPANARAFELASLSGYESAKIVLLLMSLEKPSPEVVTAVKSAVAWFEKTKITTLEEKRVLNDAGKIVDKKMIPATNATPIWARFMDLETNEPFFCDRDGIRKKSIDQIGAERRNGYSWYSEAPKEVLKRFPDWAVKNGTKVSASEKKNVTLITVAQDGSGDFTKIQDAVYACPAFPYEKVTIHVKNGTYNEKVRIPEWNTNVILKGESKENTIITFDDNFSKIGLGRNSTFYTYTVLVEGDDFSASNLTIKNTSGERGQAIALSVVANRAKISNCNLLGNQDTLYISGKDAKQYFKDCYIEGTTDFIFGSATALFENCIIHSIKSSYITAASTPEGTAFGFVFRNCKLTANADAKDVYLGRPWRIYAKTVFINCEMGGHIKPEGWENWSKPEAEKKAFYAEYNCTGEGFQPSKRVSWSHQLTKKEAGQYTIENILKDKISNWYLR
>CP030261.1|AXB58263.1|4019517_4021107_-|glycoside-hydrolase
MRNIKIILFLLSVCTFQKNSAQVWVPDNGDGTYTNPIIHADYSDPDVVRAGDDYYMTASSFNCNPGLPILHSKDLVNWKIVGYALSKQPPFETYDKVQHGNGVWAPSINYHNNEFYIYYPDPDFGIYMIKAKKAEGPWSEPLLVKAGKGLIDPSPLWDTDGKAYLVHAFAGSRAQIKSLLVVCTMNSEGTVVNNDEVMVIDGHDGEGTIEGPKFYKRNGYYFIFAPAGGVPTGWQTVLRSKNVFGPYEKKKVLEQGSTAINGPHQGAWVTTQTGEDWFFHFQDKGAYGRIVHLQPMKWVNDWPVMGEDFDKNGIGEPVTTYKKPNVGKKYPIEIPAASDEFNEPKLGLQWQWQANKQINWGFPTSLGYLNLFCNTTTPNIFNAPNLLLQKFPAEEFTATTKVTFNPRLNGESTGLIVMGLDYSYLCFKNDNGKLYLNQKTGTFSNVVSETETKPVLIESNTIYLRVKIKKGGICSFFYSLDDKKYEPVGKDFTAKEGRWIGAKVGLFALGEVVKNDSGNAAVDWFRITK
>CP030261.1|AXB58264.1|4021352_4022576_-|glycosyl-hydrolase-family-88
MKNTRKQSYLMSVLMICVMTITSCKVTSQEPAKKDIVIGKNAKWSDKMALTLMKRHPEAYMLDDAKKPKWDYVHALVLHSIEELYKKNPDSRYKAYVRGYVDELVQADGTIKTYEFEKYNIDLVLPGRLLFDVYAYSKEDKYLKAMQLIRKQLTEQPRTESGGFWHKQIYPNQMWLDGLYMGEPFYAEYTAKFENGKSFDDIAKQFELIQLHATDPKTGLLYHGWDESKQMPWADKQTGNSPNFWSRSLGWYVMALVDVLDYMPKDHPKQKELVKYLNNVSEALLKFQDKSGLWYQVTDKVDGKGNYLEASGSAMFSYAFAKGANKGYLPAKFKKSANKAFDGLTKVLIKKVDEDGGITLTNCCQVAGLGGNPYRDGSYEYYVNERKKDNDPKATGPFILAALELNR
>CP030261.1|AXB58265.1|4022598_4023822_-|glycosyl-hydrolase-family-88
MSKSLFGKINLKKTAIVLLLFLGCKGIAQNQNSSENTVVPSDLKWSERAALTILNKYPRAWQLDGNEKPKWDYKMGFVLSGFEKLYQKTNDKKYLNYIKEYVDGMIDSTGNIKKYDIKEYNIDYLNPGKLLFNLYEITKDSRYLQIIGKLRNQLETQPRTASGGFWHKQIYPNQMWIDGLYMAEPFYTQFTVKYEKGKSLDDIARQFELVHNHIVDKKTGLVYHAWDESKEIAWADKQTGTSPTIWGRGIGWYMVALVETLDYFPKSHPKYKVLVEYLNQISKNVNQYKSKSGLWYQVADKPELFGNYVEPSASGMIIYAFAKGANKGYLAGSYKSTAKKSFDSFVKEFVKVDKKGEVNILNVSSNVGLGGKPFRDGTNQYYLTAKPKENGAIGIGAFLLASIELEK
>CP030261.1|AXB58266.1|4023827_4024793_-|DUF4861-domain-containing-protein
MKAKITTAILFLAGITAVNAQKYDIKTNKTYAEISAKTDGKWEGRKYKGGTVFKNVDRLKLAPEHTDHSFDIRYEGPGWENNRIGYRLYLDWRNAIDIFGKKTSENILPLVGQDGFDSYHNMSDWGADILKAGKGIGIGSIDRYLNNEKLHFREVDSTIAAVSNKANESVVKVNYYGWKTASDKIDFISELTIKPNELYTQHTIKASKEIKGICTGIVKQKNTEVLKKESKNKKWAYLATYGEQSLVPDKLGMAIFYEISTIENIADTDLDYLLVFKPTTKATTFYLLGAWEQEVNGIKNKEEFVKYLDQKLEVLNKKSKM
>CP030261.1|AXB58267.1|4024805_4025744_-|alpha/beta-hydrolase
MQKVRLILVVFFYVIAVQSQQYKIDTSYTIKSTFTKLLKKYPFITIPEVTTNQDVTAMFDLVYNKEQERTLHFDAFVNTKKKKNPAVIMIHGGGWRSGNKNQMQFLGKEIAAKGYSCFAIEYRLSLEAKYPTGVIDVKNAIRFIKDNARKFNVDPNKIAVLGCSSGGQMAALIGTTNENPIFEDTTFKSKHSSKVNAIVDVDGVLAFKHPESSEGDMAAFWLGGKSDEIPENWKNASALTHTNKNTPPILFICSSIPRFHAGRDDMITILNENKIYNEVQTIPDSPHSFWFYEPWFGQTVSYTVRFLDKIFK
>CP030261.1|AXB58268.1|4025841_4027515_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKIIIMLGLIAVSVSSCSDYIEEDSRSYVPADATYKTATGFQLLVNSNYAWLKGIYGGNPWLFEAGTDMYAEGRTPEPAGLSQYALLIPSSDNVADLYNSCYQQIQAVNKTVYYSTVTEQTPNINTLVGEARYLRANAYFLLVQTYGGVPIVLDNITTPVLSFTRNTAEEVYTQIIADLDFALANVGTASYATAGKVNKRAVNDLLAKVYLTRGYESFGKADDFSKAAAYADAAIAGQTLAISFDQLFKPGNDLNAETIFSVQYDKASTSTDPTKLGNNQFYYFSSYLGGAETGAPLRSYNLCPTDYALGLYEKGDARWNATFMTEILEGPETTNGVTKTILYYPYYRSSNPASLKVRHFYEPKWFTPADKTAWMTANASRLASTFVYHPWGEYSAAHTLIKNLDCYTIPVKKFDDPDPTTPSSTGPVSTRDIIVSRLGETYLVAAEAYLKAGNPATGLDRLNEVRRRAGVANATLAQFNIDYILDERGRELLGEYKRWFDLKRTGTLVARASAHNYKIKEANFVGVDGKLKILRPIPQTVLDLNQNKDFPQNPGY
>CP030261.1|AXB58269.1|4027527_4030659_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MNFKKLSKKKEKYSFVFLFFLNLLLCNTTNAQSGIIEGKITDAAGLSLPGVNIQEKGTKNGTSTDFEGSFKINVTNPKATLVISYLGFQTQEVSIAGKSKINVSLAEQSNSLNEVVVVGYGSVKKTDLTGSVSTISAATITERNTINPLEAIQGSTPGVQISSSSGRAGDGFKVVIRGNNSLIADSSNPSMVGSSPLYVVDGVPMDGIDFLNPQDIARMDVLKDASSAAIYGSRGSNGVIIVTTKSGTSAKAGISVTFDTSYGNKTTARLPKMMTGEEWWKFHQVAYMSATPQTQTPAQLASLAGNQSPLLVSRANSGYNFDWYDAVLKTGMTENNYLNITGRSDSGLSYNLGFGIQSDRGLIENDATDKYSFKLGLNHKINDKFSTGVNVTIARLNNQLGSDLAMQDAFRLSPLMSPWAIDAAGNEQVGTLFFLPGKLTYPNGSWVINKTSTVNPLMEIANSSQTEKTWQTVGNVYFQYQPIKWLSFKTTFSAGIMDTTESAAYTAQTNAGVTLNGKNSAILESANNFNYTWDNQIDLKHTFNEVHDFSLLLLQSLYSNVDENSYMSSNNQPFDVGTDNMGSGVQTSYVIRSAYAKNTLNSYAVRLNYAFKDKYLVTASTRWDGSSVLSEGNKWQSFPSLALGWKLSKESFLENSSVVSDLKIRASIGYTGNDNVAPYTSQALLNQQTFYASGANVVPGWQSENLANPNLTWEKTREYNLGIDFGFLKNRISGSVDVYDRLSDDLIYKQQLPAETGWKNTFANVGSVSNKGIEVLLTTKNIKSQNVNWETTFTFTKNVNKLESIYNQDQVSDIGNKLILGAPLNPNYNYVYDGVWQESEAAQAASYGMAPGQARPQDLNGDGVFNQDDRTVIGNPNPEWQGSLYSKLTVGQFDFNFSVLTSQGQTVLSTFHQNFADVSDRGRQKLAMEYFIPTNGTGIEANANTVNPRPGPVATGAGAYWTSLFGYYRDASYVKIKNISLGYTLNSDLLKKLKISNLRVYVNVLDPFVFTKFDGYDPEWAGSPFGVNRPASVTTQLGLSVKF
>CP030261.1|AXB58270.1|4030692_4032138_-|glycoside-hydrolase-family-28-protein
MIPAKNLKFNWIVFLTALTIAVVSCAKKTSSITTNASNPWKKMDLVLKSIPQTHFEDKVYNINDFGAVADGKTLNTEAFQKAIKQCAANGGGQVLVPNGKYLTGAIYLESNVNLHLQDNAEILFSLNPKDYPIVHTSWEGTEVMNYSPLIYAKNKTNIAVTGKGTLNGQADSTNWWIWSGGKNYGWKKGIPSQNDPTNREVLVDMAEKGVPVAERIFGEGRYLRPNFIEFFECNTALIKDVTIINSPFWILHPIKTNNMIIDGVTVNSHGPNNDGCDPEYSQNIVIKNCTFNTGDDCIAIKSGRDADGRRVAIPSKNIIVQNCKMIDGHGGVVIGSEISAGVNNVFVENCVMDSPNLDRAIRIKTNSKRGGVIEDIFVRNLEVGTVKECVLKLNMFYNVYGSQTGNFIPTIRNVSLENVNVKNGGKYSVWAEGYAASPVENITLKNVKIQKVDSVYLLKNVKNINFINTYINEKKVESIKH

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030261_2	2.1|1004029|26|CP030261|PILER-CR	1004029-1004054	26	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	325161-325186	4	0.846
CP030261_2	2.1|1004029|26|CP030261|PILER-CR	1004029-1004054	26	NZ_CP050184	Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence	213858-213883	4	0.846
CP030261_2	2.1|1004029|26|CP030261|PILER-CR	1004029-1004054	26	NZ_AP018173	Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome	152149-152174	4	0.846
CP030261_1	1.4|979606|33|CP030261|CRT	979606-979638	33	AJ842011	Bacteriophage 11b complete genome	10139-10171	7	0.788
CP030261_1	1.4|979606|33|CP030261|CRT	979606-979638	33	NC_006356	Flavobacterium phage 11b, complete genome	10139-10171	7	0.788
CP030261_1	1.3|979558|30|CP030261|CRT	979558-979587	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	698934-698963	8	0.733
CP030261_1	1.4|979606|33|CP030261|CRT	979606-979638	33	NZ_CP009963	Collimonas arenae strain Cal35 plasmid unnamed, complete sequence	36805-36837	8	0.758
CP030261_1	1.7|979759|33|CP030261|CRT	979759-979791	33	LR596902	Roseburia phage Jekyll genome assembly, chromosome: 1	37530-37562	8	0.758
CP030261_1	1.8|979810|33|CP030261|CRT	979810-979842	33	NZ_CP012421	Rickettsia amblyommatis strain Ac37 plasmid pRAMAC18, complete sequence	12223-12255	8	0.758
CP030261_1	1.8|979810|33|CP030261|CRT	979810-979842	33	NC_017029	Rickettsia amblyommatis str. GAT-30V plasmid pMCE_2, complete sequence	13693-13725	8	0.758
CP030261_1	1.8|979810|33|CP030261|CRT	979810-979842	33	NC_013938	Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM18, complete sequence	12384-12416	8	0.758
CP030261_1	1.8|979810|33|CP030261|CRT	979810-979842	33	NZ_CP015014	Rickettsia amblyommatis isolate An13 plasmid unnamed_3, complete sequence	12812-12844	8	0.758
CP030261_1	1.3|979558|30|CP030261|CRT	979558-979587	30	MK448686	Streptococcus phage Javan157, complete genome	4455-4484	9	0.7
CP030261_1	1.3|979558|30|CP030261|CRT	979558-979587	30	MK448951	Streptococcus phage Javan470, complete genome	4455-4484	9	0.7
CP030261_1	1.6|979708|33|CP030261|CRT	979708-979740	33	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	168822-168854	9	0.727
CP030261_1	1.1|979429|33|CP030261|CRT	979429-979461	33	MK075006	Staphylococcus phage phiSP119-3, complete genome	43992-44024	10	0.697
CP030261_1	1.1|979429|33|CP030261|CRT	979429-979461	33	MK075002	Staphylococcus phage phiSP38-1, complete genome	43379-43411	10	0.697
CP030261_1	1.4|979606|33|CP030261|CRT	979606-979638	33	MN698241	Pelagibacter phage HTVC027P, complete genome	50627-50659	10	0.697

1. spacer 2.1|1004029|26|CP030261|PILER-CR matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.846

cttttattcgaattcttttacttcaa	CRISPR spacer
cttttattcatattcttttacttaat	Protospacer
*********. ************ * 

2. spacer 2.1|1004029|26|CP030261|PILER-CR matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 4, identity: 0.846

cttttattcgaattcttttacttcaa	CRISPR spacer
cttttattcatattcttttacttaat	Protospacer
*********. ************ * 

3. spacer 2.1|1004029|26|CP030261|PILER-CR matches to NZ_AP018173 (Calothrix sp. NIES-2098 plasmid plasmid1 DNA, complete genome) position: , mismatch: 4, identity: 0.846

cttttattcgaattcttttacttcaa	CRISPR spacer
cttttatgcgaattctattactttat	Protospacer
******* ******** ******.* 

4. spacer 1.4|979606|33|CP030261|CRT matches to AJ842011 (Bacteriophage 11b complete genome) position: , mismatch: 7, identity: 0.788

--taataattgagcttgtaaagctgccatatctgc	CRISPR spacer
atcagca--tgagcttgtaatgctgccatatctga	Protospacer
  .*..*  *********** ************* 

5. spacer 1.4|979606|33|CP030261|CRT matches to NC_006356 (Flavobacterium phage 11b, complete genome) position: , mismatch: 7, identity: 0.788

--taataattgagcttgtaaagctgccatatctgc	CRISPR spacer
atcagca--tgagcttgtaatgctgccatatctga	Protospacer
  .*..*  *********** ************* 

6. spacer 1.3|979558|30|CP030261|CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.733

tttcgcttttgccgtagcttcggcatctgc	CRISPR spacer
ggcgacctttgccggagcttcggcatcggc	Protospacer
  . .*.******* ************ **

7. spacer 1.4|979606|33|CP030261|CRT matches to NZ_CP009963 (Collimonas arenae strain Cal35 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

-----taataattgagcttgtaaagctgccatatctgc	CRISPR spacer
gtgcgtagt-----agcttgtaaagctgccgtagctgc	Protospacer
     **.*     ****************.** ****

8. spacer 1.7|979759|33|CP030261|CRT matches to LR596902 (Roseburia phage Jekyll genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.758

agcctgctgtgctttcaatgcctcagcatccgc	CRISPR spacer
ctgcttttctgcctttaatgcctcagcatccgc	Protospacer
   ** .* ***.**.*****************

9. spacer 1.8|979810|33|CP030261|CRT matches to NZ_CP012421 (Rickettsia amblyommatis strain Ac37 plasmid pRAMAC18, complete sequence) position: , mismatch: 8, identity: 0.758

tgcaagtttagcttgaagcgcctctgcatcggc	CRISPR spacer
agcaagtttagctttaagagcctctttttgcgc	Protospacer
 ************* *** ****** . *  **

10. spacer 1.8|979810|33|CP030261|CRT matches to NC_017029 (Rickettsia amblyommatis str. GAT-30V plasmid pMCE_2, complete sequence) position: , mismatch: 8, identity: 0.758

tgcaagtttagcttgaagcgcctctgcatcggc	CRISPR spacer
agcaagtttagctttaagagcctctttttgcgc	Protospacer
 ************* *** ****** . *  **

11. spacer 1.8|979810|33|CP030261|CRT matches to NC_013938 (Candidatus Rickettsia amblyommii AaR/SC plasmid pRAM18, complete sequence) position: , mismatch: 8, identity: 0.758

tgcaagtttagcttgaagcgcctctgcatcggc	CRISPR spacer
agcaagtttagctttaagagcctctttttgcgc	Protospacer
 ************* *** ****** . *  **

12. spacer 1.8|979810|33|CP030261|CRT matches to NZ_CP015014 (Rickettsia amblyommatis isolate An13 plasmid unnamed_3, complete sequence) position: , mismatch: 8, identity: 0.758

tgcaagtttagcttgaagcgcctctgcatcggc	CRISPR spacer
agcaagtttagctttaagagcctctttttgcgc	Protospacer
 ************* *** ****** . *  **

13. spacer 1.3|979558|30|CP030261|CRT matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 9, identity: 0.7

tttcgcttttgccgtagcttcggcatctgc	CRISPR spacer
caatttatttgtcttagcttcggcatctgc	Protospacer
.  . . ****.* ****************

14. spacer 1.3|979558|30|CP030261|CRT matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 9, identity: 0.7

tttcgcttttgccgtagcttcggcatctgc	CRISPR spacer
caatttatttgtcttagcttcggcatctgc	Protospacer
.  . . ****.* ****************

15. spacer 1.6|979708|33|CP030261|CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.727

cgctaatttagcctggcgggcttcctcttcaac	CRISPR spacer
ccatggcgcagcctgacgggcttcctcttccac	Protospacer
*  *... .******.************** **

16. spacer 1.1|979429|33|CP030261|CRT matches to MK075006 (Staphylococcus phage phiSP119-3, complete genome) position: , mismatch: 10, identity: 0.697

cttagcttttgcatctgcagctaatcttgcttt	CRISPR spacer
tttaccttttgcacctgcagctaataagaatga	Protospacer
.*** ********.***********   . *  

17. spacer 1.1|979429|33|CP030261|CRT matches to MK075002 (Staphylococcus phage phiSP38-1, complete genome) position: , mismatch: 10, identity: 0.697

cttagcttttgcatctgcagctaatcttgcttt	CRISPR spacer
tttaccttttgcacctgcagctaataagaatga	Protospacer
.*** ********.***********   . *  

18. spacer 1.4|979606|33|CP030261|CRT matches to MN698241 (Pelagibacter phage HTVC027P, complete genome) position: , mismatch: 10, identity: 0.697

taataattgagcttgtaaagctgccatatctgc	CRISPR spacer
taataattgtgcttgtaatgctgctcggttcct	Protospacer
********* ******** *****.  .*.. .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	327001 : 338427	11	Enterobacteria_phage(25.0%)	NA	NA
DBSCAN-SWA_2	719872 : 725993	8	Lactococcus_phage(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>CP030261|327001:338427|DBSCAN-SWA
ATTATTCTTTAAACATTCCATCTATAATAGCTACATTAGTCGCTCTATTAATTTTATTACCTCCCCAATAATTACTTGCAAAAACATTAAATACAAAAACATTATGTAACAAATCAATTTGATTTACTCCTATTTTTCCATTTTGCACTACTATGTCTAAATTATACTGACCACCTCTTAATAAAAGTTTGGGAATTTCTAAATCAACATATCCATTCTTTAAAATATTATTGAATTTCACTCCCATTTCATCCGAATAAAAATCAGCAATTTTAACTTCATTATTATCTCTAAAAACTACTCCAAAAACTAAGCTTTCAACGGAAATTTCTTTCACTATTTCGAAATAAAATCTAAATTTAGAATATTCTCCAGAAAATAATTCGTTAACATTTTGTCCTTTATCATTAAAAAGCATGACGTTAGAAAATTTCAATTCCCCACTTCCTTTTCTATCTCTTCTTGTTAATAAATTATTTCCTGTTTTCTTGTTTTCATTTGCTAGATAGTAATTTACAGCTTCATGTGAATCACCCTTAAAAATAATCTTTCCATACTCCATCACAATCCCCGTAGTACATAAACTTTTCACAGCTGTCATATTATGACTCACAAACAAAACAGTTCTTCCTTCTCCTTTTGCAATATCCTGCATTTTACCAATAGCTTTTTTCTGAAATTCAGAATCACCTACAGCAAGTACCTCATCAATTACTAAAATTTCAGGTTCAAGAAATGCCGCTACGGCAAAAGCCAAACGCACTGTCATTCCCGAACTATATCGTTTAACTGGAGTATCTATATAACGTTCACAACCCGAAAATTCAATAATTTCATCAAGCTTAGAAAAAATTTCTTTTTTAGTCATTCCTAAAATGGCTCCATTAAGAAATATATTTTCTCTCCCTGTCATTTCACCATTAAAACCAGTTCCAACTTCTAATAAAGAAGCTATTCGCCCTCGAGATTTTATACTGCCTGTTGTAGGTGCAGTTACTTTTGAAAGAATTTTTAAAAGTGTGGACTTTCCTGCTCCATTTTTACCAATAATCCCTAAAACTTCTCCTCTCTGAACCTCAAAATCAATATCTTGTAGAGCCCAAACATAGTCTGATTTTCCTTTTGTAGAACGATCATTTGTGTCCCCAATTTTTAAATAGGGATTTTCTTTTCCACGAATTTTATGCCACCATCTATTTATGTCATGACTTAGAGTTCCAGTTCCAACCTGACCCAAACGGTATTGTTTGGAAATATTTTCGGCTTTTAAAATAATATCTTTCATGTAGAATAAAATGTAGACTTAAAACAAGTAATGAACTTTTAGTGTTTAATTTTTATTATTTAATTAAACTGTGTCTATAAAACTTTTTTCTGTTTTATTAAAAACTAGTAATCCAATAAAAAAAACAATTGATGTCACAACTATTGTATAAACTAAACCATAAATTGAGATATTACCAATATCTAAAAGCATAAAACGAGATGTCTCAATTACATATGCTAGTGGATTATATTGAACCATCCAGCCTACATTTGGGATCTTTTCTTTTATTAATTCCATGGGGTACATTACTGCTGATAAATACATTAACAATTGTATCCCAAAACCGACCAAATTATTTAAATCACGGTACTTTGTAACCATCGAAGAAATCAGCATTCCTAATCCTAATCCTAAAATCCCCATAAATATAATTAACATAGGAAAAAAAAATATTGATGCATTTAAACTCAATTTCGCGCCTTGGAAATAGTAGAAAATATAAAAAGCAACGAAAATACCAAATTGAATGCCAAATTTGATTAAATTCGAAACTACAATGGACAAAGGTGTAATAATTCGGGGAAAATAGACTTTTCCAAATATAGAAGCATTGCTTTTAAATGTATCTGAAGTACCTGTTAAACATGAAGTAAAATAATTCCATACTGTAATACTTGCAAGATTAAATAAAAAAGGAGGAATTACTCCTGTGCTAATTCCTGCAACATTATTGAAGATTATAGTAAAAGTAATAGATGTAAATAACGGCTGAATTAAATACCATAACGGCCCTAAAACCGTTTGTTTATATACAGTTATTATATCCCTTTTTACAAAAAGCATTAATAAATCTCGATACTGCCAAATTTCTTTGAAGTTAAGTGAGAAAAAATTATTCTTGGGTGTTATTTCAAACAACCATTCATTTGTGTTTTTAGAATCCATTTAAAAGAACTTGAATGTCTTGCTTTATAAAATTAACAAGATTTTTAACATTTTAAAAATTATTTAAAAATGCGAAAAGGCGTTTTTTTAAAAAAACACCTTTTCATTATACTTTGAGATTTATATTATAATTATTTGTCTAAGACTTCAAAAGTTGAGTTCATGCTTTTAAACTCTGGAACAATTTTTTTCATTTTAGAGACTATATCATCATTTTCATAAAAATCAGCTATGCCGATAAGTTCATCTACATCAATATGCAAATTCTCATATTCATCTTGAATTTCTTGTGCAATCATGATTTTCTCATGGTAAGTCGGCAATGTTTTAGAAGTGTCATTTAACAATTCTTCGTACAATTTTTCGCCAGGCCTTAGACCAACAATCTTGATTTTTATTTCTTTATCTGGAATAAAACCAGCAAGTTTAATCATTTTTTTAGCTAAATCAATTATTCGAACCGGCTTACCCATATCAAATATATAGATCTCCCCCCCATTACCCATTGCTCCAGCTTCCAAAACTAATTGGCAAGCTTCTGGAATAGTCATAAAATAACGAATAATATCTTGATGTGTTATTGTAACAGGTCCTCCCTCTGCAATTTGTTTAGTAAACAAAGGAACAACCGAACCATTTGAACCTAAAACATTACCAAAACGAGTTGTAATAAACTTTGTTCCGCCCTCAATATTTTCTCTTTGATTTTTTAAAAATAAAGATTGAACATATTTTTCAGCAATACGCTTACTTGCGCCCATTACATTACTTGGGTTAACAGCTTTATCTGTAGAGACCATAACAAATTTCTTTACATGGTACTTACAAGCTAAATCTGCTAAATTTTTGGTTCCTTTAATATTAGTTTGAATAGCCTGAGAAGGGTTTTCTTCCATTAAAGGCACATGTTTATATGCTGCCGCATGAAAAACAACATGTGGATTATAATTTTTAAATACCTTTTCTAAAGCTTTTTTACTTCTGACATCAGCAATTACTGCCACAATCTTTGCACTAGAATTCATAGCTTGAGTTTCTAGACATAAATTATGCAATGGCGTTTCTGCATGATCTAAAACTATAACAGTTTTTGGATTAAAGTTTAGAACCTGTCGGACAATTTCGCTTCCAATAGAGCCAGCAGCTCCTGTAATTAAAATTGTCTTATCTTTTAACTGTTTAGAAATTGATTTACTATCAAGAACTATAGGTTTTCTTTCTAATAAATCTTCAATCTGAATATTCTTAACTTTTTGAGAAATTTCTTTTTGATTTTCCCAATCTGAAATTAAAGGAACTGTATATACTCTGTAATTAAATTCCAAACATTGATCAACAATGATTAGTTGTTCTTCCTTGCTTAAACTTTTATCAGCAATAATTACACCTTCTGCAGCGACAGATCGCATTAATGCTGGAAGCTTTTTTCTTAATATCAAAATAGGAAGATCAAGCATACGCTTCGAAGCATTCTGATTGTTCTTATCTACAAATCCTACTATTTTAAATCGAGAAGGCGTTTCAAACTTAAGAGCATTTGCTACAGAAATTGCATTGGCATCTGTACCATAAATAACTGTTCTAACCAATTTTGTGGTCGCTTTTTCTGAAAAGTACATTTCAAAAGTCTGTTTTACTATTACGCGATATAAAAACAAACCACAAAATGACAAAACTAAATTTATAAACAGTGCAGTATTCAAAAAGGCTTTATGCCCAGTGTACAATTCAAAAACTAAATTTATAAATAAGAAAAACACCAAAACCGACATTTGAGAAAAAAGCAGTTTTATTGCATCTATATAACCAGAATGCCTGATAATTCCTGAATATGTCCGGAAGAGCCAAAAGAAAAATACGTTTACAAAAATTAAACTTGCAACAAAATAAAAATCATGAGATGTAATGATATATCCAATTGCAGTCCCTTCAAAAAGCAAATACGTAAAAGAGAATGAAAATAACAGAATCATCACATCGATAGCAATGATTATCCATCTCGGCAGATAACTCAGGTTATTAATGTTAAACCTAATATTCCTTGGAGAAAAGGTTTTATACAATAAAGATGTAATACTATTTGGTTTATCTGTACTCAATTGGGTTTTTATTTAAATATATGAAATCTGAATGGTGTACAAAAATACAAATTAAAGGTTTTAAATAATTAATTATATAGGCAAATTAAATTTTAACACCTTTTTTCTTTTGTTTTAAAAAATCGATCAAATATTTTCCATAACCAGATTTAACTAAAGGCAACGCTAATTCCTCAAGCTGTTCATCGTTAATAAAACCTTGCCTCCATGCAATTTCTTCAATACACCCAACTTTCAATCCTTGTCTTTCTTCTAAAACCTGCACAAATTGTCCTGCCTGCATTAAACTATTAAAAGTTCCTGTATCAAGCCAAGCTGTTCCTCTACTTAAAATTCCAACTTTTAATTGTCCCTTTTCAAGATAAACCTTATTAACATCAGTTATTTCATATTCACCACGAGCACTTGGCTTAATGTTTTTAGCTATTTCGACAACACTATTATCATAAAAATAAAGACCTGGAACTGCATAATTTGATTTCGGCTCTAAAGGCTTTTCTTCAATAGAAATTGCATTTTTAGCTTCGTCAAATTCAACCACCCCATATCTTTCAGGATCAGACACATGATAAGCAAAAACAACGCCACCATCTGGATCAGCATTATCTTTTAACAATTGCTGCATATTTGTTCCAAAGAAAATGTTATCTCCTAGTACTAAAGCAACTTTATCTTTCCCAATAAATTCTTCGCCTATTACAAAAGCTTGAGCTAATCCATTAGGATTTGGCTGTTCTGCATAACTAAATTTACAACCAATTGTACTTCCATCTCCTAAGAGTTTTTTAAAATGAGGTAAATCATGAGGGGTCGATATAATCAAAATTTCATTGATACCTGCCATCATCAAAGTAGATAATGGATAATAAATCATTGGTTTATCATATACAGGCATTAATTGTTTACTTACTGCCAATGTAAGGGGATGCAATCTTGTGCCAGAACCTCCTGCTAAAATAATTCCTTTCATAAACTTAATTTTAGATTGTGATTTTAGATTTTAGATGTTTAATTTTTCAAACCTCTAGAATTCTAATCTAATTTTTTAAACAAACATTTTTTTTAAGCTTTCTTTATAATTTGGAATATTTAAATTATAAATTGCTTTTATTTTTTCTTTACTTAACAATGAAAAGCTTGGTCTTTTTGCCGGAGTTGGGTACAATGCTGATGGAATTCCTCCTACTTTGCAATTATAACCTCCAAATTCTTTTATACTTAATGCAAATTCGTACCAGCTAATTTCTCCTTCATTCGAATAATTATAAACTCCAGGAATCCACTTTGAAGATTCAATGATGTCAATCATTGCCTGTGCCAAATCTGCCGCATAAGTTGGCGAACCAATTTGGTCGTTTACAACATTAATTTCATCTCTTTCCTGCATTAATCGCTGCATCGTTTTTACAAAATTATTTCCAAATTTGCTGTAAACCCAAGAAGTTCTAATAATAATCGATTCAGGATTTTCTTTTAAACATGCGATTTCACCGGCTAGCTTACTTTCTCCATAAACATTTATTGGATTAGTTTCAGCCTCTTCATCTAAAACAATTGATGAACAACCATCGAATACGTAATCTGTCGAAATTTGAATTAATCTAGCATTATTCTCTCTGGTAAATCTTGCTATTAATTCTATTGCTAAGTGGTTCACTCTAAAAGCTAAATCTTTTTCTGATTCAGCTTTATCAACAGCAGTATAAGCTCCACAATTAAATATAATATTAGGACGAATTGCCTCTAATTGAGACTGAAGCATTTCTAAGTTATCTAATGTAATTTGAGTTCTATCTGCAAATACCCATTTATATTGAGGATAAGAAGATGCTAAAACTGAAAGTTCAGATCCTAATTGTCCCGTTGCACCAGTTACTAGAATTTTTTTCATTAAAATAAACTATTACAATTTTCAATAAAAGGAAGAATTTGATCTTTTTCTGAAACTATTGCTTCTTCCAGATTCATTCCCCAATCAATATTCAAAGACGGATCATCGTATTTAATTCCGCCCTCAGAGGCTTTGTTGTAAAATTGATCACATTTATACATTACTGAAGCTGTTTCGCTAATAACAGAAAATCCGTGTGCAAATCCTTGAGGCACTAATAATTGTTTTTTATTCTCGGCTGATAATAAAACACTAAATGCTTTTCCATAAGTAGGAGAATCTTTTCTTAAATCTACCGCAACATCAATAATTTCCCCTTCTAAAACACGAACTAATTTTGTCTGCGCGAAAGGAGGATTTTGGTAATGTAAACCTCTTAAAGTTCCTTTCTTTGAGAATGATTGATTATCTTGAACAAATTCTATATTAATTCCTAAATCATCAAATTTTGTTTTACTATAAGATTCAAAAAAGTAACCTCTTTCGTCTCCAAATACTGTTGGTTCTACAATTACCAAGTCTTTTATATATGTTTCTTCAATTTTCATTTTTAATTTTATATTCATTTAAAGAAATTAATAATAACCTCCTTTATTCTATTTTTATCTTCTTGTGTAATGTTTGACCCAGATGGCAGACACAATCCTTTTTCGAATAATTTTTCTGCAACTTTATTTCCATAATATGGATATTGCTCAAAAACTGGCTGTAAATGCATTGGTTTCCAAAGAGGTCTGCTTTCAATATTTGCCTTTTCAAGAGCAAGTATTAGATCATCTTTATTTTTCTGATTTTTTGTTTCAATCAAAATAGTATTTAACCAATAATTTGAAAAATAATCTTTATTTACAACTTCAAAAATCTCAACACCATCGATATTTCTGAAAATCTCCTTATAAAATTTATGATTCTCTCGTCTGCTTTTCACATTTTTATCCAAAATTTTTATTTGTCCTAAACCAACTCCAGCGCATACATTGCTCATTCTATAATTATAGCCAATTTCACTATGTTGATAATGAATTGCATTATCTTTAGATTGAGTAGCGTAAAAAATAGCTTTTTCTTTTACTTTTTTGGAGTTTGTAAGTAATGCGCCTCCGCTAGAGGTTGTGATAATTTTATTACCATTAAATGATAAAACTCCAAAAGTACCGAAAGTACCGCATTTTTTTCCCTTATAAGAACTTCCTAAAGCCTCTGCACTATCTTCAATAATTGGAATTCCATATCGATCCGCAATGGCGTGAATTTCATCTACTTTATACGGGTTACCATACAAATGAACCGTAATAATTGCTTTAGGTTTTTTGCCTTTTTTGATTCTATCCTGAATAGCAATTTCGAGAAATTCTGGACAAATATTCCAAGTATCTTCTTCGCTATCTACAAAAACAGGAGTTGCTCCCTGATATAAAATAGGATTCGCTGATGCCGAAAAAGTCATGCTTTGGCAAATAACTTCATCATTCTTATTTACTCCCAACAAAATTAATGCTAAATGAATTGCTGAAGTTCCAGAATTTAAGGCCGTGACAAATGATTCATCATCAAAATAATTTTGTAAAGAACTTTCGAACTCATCTACATTAGGACCGCCTGAAGTTATCCAATTTGTATCTAAAGCTTTGTGAACATATTCATGCTCAAAACCACTTTGCTGCGATAACGAAAGAAAAATCCTTTTACTACTCATTTAATCTCCAATAAGTGGGATCATATCTTACATCGTCTTCACTCACATTTGATAAAGGTAATATTGAAAATGAAATTAATTTTGAATTACTTTCTAGTGATTGTATTGCATTTGCATAACCTGCCGGAATATGAACTATTTTACTATCTGACTCAGATACCAAAACAGTCTCAATACTTAAATCTTTTGAAGGATTTTCCCAATTATCAATTTTTACAAAATGAATTTTAAAAGATCCGCTCAAACAATAAAAATTTTTAGCATCTAATTTATGACCTTGCCAGGCACGTATAGGGTTTTCATCAGAATTGCTTATGATGTAAAATCTTTCGATGTCTTTAAATGAAAAGTCGTTTACGTAAGAAATCGTTCCGCGATGATCTGAGAAATTACCTCCTTGAATTATTTTTGGAATCATGCCTTTAATTTTAAATTGATTTTATTCAACAAATAAAACTTTAAGCTATATAATAAAAGTAACGGTGTAACCACTATTATAAATAGTACTATATCATTAACTTTTTGATATAAAAAGATAACTAAGGCTGATACTGCAGTTTGAGCGATTGCATAGTATAAAGACACCAAACGATGTTGTATCTTATATTCATTACTTAAAACTTGATATAAATGAAGACGATGCGCTTCAAAAATATTTTGTTTTAAATATAGTCTATGGATAATGGTACAAACAGCATCAACACCATAAATAGCCAGAAACAACAACCAAATAACAGAATTAGTTATTAAAATAAGTTTTAAAACTAAATAAATTATCCAAAATGCAATAGCTATACTTCCTACATCTCCGGCAAAGCATTTAGCCTTTTTTCTATAATTAAAAAATAGAAAAACAAGACTTGCAATCATTCCGTATTTGATAAAATTACCGTCGGTAAATAATTGCAATTTTGTATTTACGTATAGCAAAGCTCCAAGAACAATTAAAGTGTAAAGACCAGTTATTCCGTTTATACCATCCATGAAATTGTAGGCATTAATGAGTCCTATAGCCAAAACATAAGCGATTAATACTCCCCAAATTGGAACCAAACTAAACAGTCCCAAATCATAAAATATCAAAGTAATAGCTACAAAGTGCACTGAAATTCGGATTTTATTTGACAGACTTTGAATGTCATCCCAAAAACTAACCAAACTAACTAAAGTTATTCCAGTAAAAAAGAAATAATTGCTTTCAATATGCTGTAGAAAATACATTAAAGCAGCAAACCAAAAAATGATTCCACCGCCTCTTAATGTAATCTCTGTATGAGAACTTCTTTGATTAGGCTTATCAATAATATTAAAACGATCTGCTACTTTAAAATAGAGCAGCATTAAAATCATCAAGAGAATTCCGAGTATTGTGTATTCCATTATTTATTTACAAAATTTATTGTACAAATTAATGTAGAGTGCAAGTTACTTACTCCCAATTTGTATCTTTAATTTCATCGTAAACTTTTTGAATACCTTCTTCTAAAGTTATTTTTGCCTTCCAGCCTAAACCACCTAATTTAGAAACGTCCATTAATTTACGAGGAGTGCCATCAGGTTTTGTCTTATCTGTCAGAATTTCTCCTTCAAAACCAACAACTTTTTTTACCAGTATGGCTAAATCTAAAATTGAAATATCATCTCCAATTCCAATATTAACCAGACCTGAATCATTATAGTTTTCCATTAAAAACAAACATGCCTGAGCTAAGTCATCAGAGTGCAAAAATTCTCTCTTAGGGCTTCCTGTTCCCCAAATTGTAACTGATGAATCTCCGTTACGTTTAGCAATGATAAATTTTCTTAACATTGCAGGTAACACATGAGAATTTTTTAAATCATAATTGTCATTCGGACCATACAAATTAGTTGGCATAACAGAAATAAAATTACATCCAAATTGATCTCTATATGCATCACACATTTTAATACCTGCAATTTTTGCGATTGCATATGGCTCATTTGTAGGCTCTAATTCTCCCGTAAGCATGTACTCCTCTTTCAACGGCTGAGGAGCCATTTTAGGATAAATACAAGACGACCCAAGAAACATTAATTTTTTTACATCATTTAGGTACGATTGATGAATTACATTATTCTGAATCATCAAGTTTTCATAAATAAAGTCCCCTCTATAAGTATCGTTGGCAATAATTCCACCGACTTTTGCAGCTGCTAAGAAAACATAATCTGGTTTTTCTTTTTCAAAAAATTCTGCAACAGCCTGCTGGTTTCTTAAATCCAGCTCAGAAGAAGTTCTTAAAACAAAATTGGTATATCCTTCAATTTTTAATTGACGTAAAATAGCTGAACCTACCATTCCACGATGTCCAGCTATGTATATTTTATCATTTAAATTCATAATGACTGCTTCTAATTCAAGAATAATGCTATTCTTAGTTATTTGGAATTAATAATTAATACTAGATCTTACTTCTTTTAACATTTTCTCTTTTAGGACGTACTGGAGATCAGACGCCATCATTTCTTTAACTAATCCGGCCAAATCATATTGCGGCACCCAGCCTAATTGAGTTTTTGATTTTGTTGGGTCTCCAATTAATAAATCTACCTCTGTTGGACGGAAATATTGTGGATCAACAGAAATAACTTGTTTACCCAACTCAATTTGGTAAGCAGGATTGCTACAAGAAGCTACATATCCTTTTTCATTTACCCCTTCTCCTCTAAATTCGATATCTATACCTACTTCGGCAAATGACATTTTAACAAAATCACGTACATAAGTAGTTTCTCCCATAGCAATAACATAGTCCTCAGCAACATCTTGCTGCAGGATACGCCACATTGCCTCTACGTAATCTTTAGCATGTCCCCAGTCACGTTGGGCATCAAGATTTCCTAAATACAAGCAGTCTTGTTCTCCTAATGCAATAGCTGCAGTTGCCATTGTTATTTTGCGAGTTACAAAAGTTTCTCCTCTGCGTGGTGATTCGTGATTAAACAAGATTCCGTTGCAAGCAAACATATTATATGCCTCTCGATAGTTTTTAGTAATCCAAAAACCATAAATTTTTGCTGCCCCATAAGGTGAACGCGGATAGAAAGGTGAGTTTTCATCATAAAACCCTTTTGCATTTTTATTTTCTGCTAAACCACCATACAGCTCAGATGTCGACGCCTGATAAATACGCGTTTTCTTCTCTAATCCTAAAATACGAACTGCCTCTAGAATTCTTAAAGTACCAATACCATCAACATTTGCAACATATTCTGGAGAATCAAAAGAAACCTTTACGTGACTCATTGCTCCTAAATTATAGATTTCATCAGGCTGCACCTCTTGAATGATTCTAATAATATTTGTTGAATCTGTTAAATCTCCGTAATGCAGCTTAAAATTCACATGAGTTTCGTGTTGATCCTGATAAATATGATCAATACGTTGTGTATTAAATGAAGAAGCTCTTCTTTTAACACCATGAACCATGTAACCTTTCTCTAATAATAGTTCTGCTAAGTAAGAACCATCTTGTCCTGTAATTCCTGTTATAAGTGCAATTTTCAT

Protein sequences of DBSCAN-SWA_1

>CP030261|327001:338427|331396_332281_-|AXB55366.1|DBSCAN-SWA
MKGIILAGGSGTRLHPLTLAVSKQLMPVYDKPMIYYPLSTLMMAGINEILIISTPHDLPHFKKLLGDGSTIGCKFSYAEQPNPNGLAQAFVIGEEFIGKDKVALVLGDNIFFGTNMQQLLKDNADPDGGVVFAYHVSDPERYGVVEFDEAKNAISIEEKPLEPKSNYAVPGLYFYDNSVVEIAKNIKPSARGEYEITDVNKVYLEKGQLKVGILSRGTAWLDTGTFNSLMQAGQFVQVLEERQGLKVGCIEEIAWRQGFINDEQLEELALPLVKSGYGKYLIDFLKQKKKGVKI
>CP030261|327001:338427|333764_334898_-|AXB55368.1|DBSCAN-SWA
MSSKRIFLSLSQQSGFEHEYVHKALDTNWITSGGPNVDEFESSLQNYFDDESFVTALNSGTSAIHLALILLGVNKNDEVICQSMTFSASANPILYQGATPVFVDSEEDTWNICPEFLEIAIQDRIKKGKKPKAIITVHLYGNPYKVDEIHAIADRYGIPIIEDSAEALGSSYKGKKCGTFGTFGVLSFNGNKIITTSSGGALLTNSKKVKEKAIFYATQSKDNAIHYQHSEIGYNYRMSNVCAGVGLGQIKILDKNVKSRRENHKFYKEIFRNIDGVEIFEVVNKDYFSNYWLNTILIETKNQKNKDDLILALEKANIESRPLWKPMHLQPVFEQYPYYGNKVAEKLFEKGLCLPSGSNITQEDKNRIKEVIINFFK
>CP030261|327001:338427|334890_335316_-|AXB55369.1|DBSCAN-SWA
MIPKIIQGGNFSDHRGTISYVNDFSFKDIERFYIISNSDENPIRAWQGHKLDAKNFYCLSGSFKIHFVKIDNWENPSKDLSIETVLVSESDSKIVHIPAGYANAIQSLESNSKLISFSILPLSNVSEDDVRYDPTYWRLNE
>CP030261|327001:338427|332356_333202_-|AXB55367.1|DBSCAN-SWA
MKKILVTGATGQLGSELSVLASSYPQYKWVFADRTQITLDNLEMLQSQLEAIRPNIIFNCGAYTAVDKAESEKDLAFRVNHLAIELIARFTRENNARLIQISTDYVFDGCSSIVLDEEAETNPINVYGESKLAGEIACLKENPESIIIRTSWVYSKFGNNFVKTMQRLMQERDEINVVNDQIGSPTYAADLAQAMIDIIESSKWIPGVYNYSNEGEISWYEFALSIKEFGGYNCKVGGIPSALYPTPAKRPSFSLLSKEKIKAIYNLNIPNYKESLKKMFV
>CP030261|327001:338427|336327_337260_-|AXB55371.1|DBSCAN-SWA
MNLNDKIYIAGHRGMVGSAILRQLKIEGYTNFVLRTSSELDLRNQQAVAEFFEKEKPDYVFLAAAKVGGIIANDTYRGDFIYENLMIQNNVIHQSYLNDVKKLMFLGSSCIYPKMAPQPLKEEYMLTGELEPTNEPYAIAKIAGIKMCDAYRDQFGCNFISVMPTNLYGPNDNYDLKNSHVLPAMLRKFIIAKRNGDSSVTIWGTGSPKREFLHSDDLAQACLFLMENYNDSGLVNIGIGDDISILDLAILVKKVVGFEGEILTDKTKPDGTPRKLMDVSKLGGLGWKAKITLEEGIQKVYDEIKDTNWE
>CP030261|327001:338427|327001_328285_-|AXB55363.1|DBSCAN-SWA
MKDIILKAENISKQYRLGQVGTGTLSHDINRWWHKIRGKENPYLKIGDTNDRSTKGKSDYVWALQDIDFEVQRGEVLGIIGKNGAGKSTLLKILSKVTAPTTGSIKSRGRIASLLEVGTGFNGEMTGRENIFLNGAILGMTKKEIFSKLDEIIEFSGCERYIDTPVKRYSSGMTVRLAFAVAAFLEPEILVIDEVLAVGDSEFQKKAIGKMQDIAKGEGRTVLFVSHNMTAVKSLCTTGIVMEYGKIIFKGDSHEAVNYYLANENKKTGNNLLTRRDRKGSGELKFSNVMLFNDKGQNVNELFSGEYSKFRFYFEIVKEISVESLVFGVVFRDNNEVKIADFYSDEMGVKFNNILKNGYVDLEIPKLLLRGGQYNLDIVVQNGKIGVNQIDLLHNVFVFNVFASNYWGGNKINRATNVAIIDGMFKE
>CP030261|327001:338427|328348_329212_-|AXB55364.1|DBSCAN-SWA
MDSKNTNEWLFEITPKNNFFSLNFKEIWQYRDLLMLFVKRDIITVYKQTVLGPLWYLIQPLFTSITFTIIFNNVAGISTGVIPPFLFNLASITVWNYFTSCLTGTSDTFKSNASIFGKVYFPRIITPLSIVVSNLIKFGIQFGIFVAFYIFYYFQGAKLSLNASIFFFPMLIIFMGILGLGLGMLISSMVTKYRDLNNLVGFGIQLLMYLSAVMYPMELIKEKIPNVGWMVQYNPLAYVIETSRFMLLDIGNISIYGLVYTIVVTSIVFFIGLLVFNKTEKSFIDTV
>CP030261|327001:338427|337308_338427_-|AXB55372.1|DBSCAN-SWA
MKIALITGITGQDGSYLAELLLEKGYMVHGVKRRASSFNTQRIDHIYQDQHETHVNFKLHYGDLTDSTNIIRIIQEVQPDEIYNLGAMSHVKVSFDSPEYVANVDGIGTLRILEAVRILGLEKKTRIYQASTSELYGGLAENKNAKGFYDENSPFYPRSPYGAAKIYGFWITKNYREAYNMFACNGILFNHESPRRGETFVTRKITMATAAIALGEQDCLYLGNLDAQRDWGHAKDYVEAMWRILQQDVAEDYVIAMGETTYVRDFVKMSFAEVGIDIEFRGEGVNEKGYVASCSNPAYQIELGKQVISVDPQYFRPTEVDLLIGDPTKSKTQLGWVPQYDLAGLVKEMMASDLQYVLKEKMLKEVRSSINY
>CP030261|327001:338427|333201_333750_-|AXB58934.1|DBSCAN-SWA
MKIEETYIKDLVIVEPTVFGDERGYFFESYSKTKFDDLGINIEFVQDNQSFSKKGTLRGLHYQNPPFAQTKLVRVLEGEIIDVAVDLRKDSPTYGKAFSVLLSAENKKQLLVPQGFAHGFSVISETASVMYKCDQFYNKASEGGIKYDDPSLNIDWGMNLEEAIVSEKDQILPFIENCNSLF
>CP030261|327001:338427|329343_331311_-|AXB55365.1|DBSCAN-SWA
MSTDKPNSITSLLYKTFSPRNIRFNINNLSYLPRWIIIAIDVMILLFSFSFTYLLFEGTAIGYIITSHDFYFVASLIFVNVFFFWLFRTYSGIIRHSGYIDAIKLLFSQMSVLVFFLFINLVFELYTGHKAFLNTALFINLVLSFCGLFLYRVIVKQTFEMYFSEKATTKLVRTVIYGTDANAISVANALKFETPSRFKIVGFVDKNNQNASKRMLDLPILILRKKLPALMRSVAAEGVIIADKSLSKEEQLIIVDQCLEFNYRVYTVPLISDWENQKEISQKVKNIQIEDLLERKPIVLDSKSISKQLKDKTILITGAAGSIGSEIVRQVLNFNPKTVIVLDHAETPLHNLCLETQAMNSSAKIVAVIADVRSKKALEKVFKNYNPHVVFHAAAYKHVPLMEENPSQAIQTNIKGTKNLADLACKYHVKKFVMVSTDKAVNPSNVMGASKRIAEKYVQSLFLKNQRENIEGGTKFITTRFGNVLGSNGSVVPLFTKQIAEGGPVTITHQDIIRYFMTIPEACQLVLEAGAMGNGGEIYIFDMGKPVRIIDLAKKMIKLAGFIPDKEIKIKIVGLRPGEKLYEELLNDTSKTLPTYHEKIMIAQEIQDEYENLHIDVDELIGIADFYENDDIVSKMKKIVPEFKSMNSTFEVLDK
>CP030261|327001:338427|335312_336278_-|AXB55370.1|DBSCAN-SWA
MEYTILGILLMILMLLYFKVADRFNIIDKPNQRSSHTEITLRGGGIIFWFAALMYFLQHIESNYFFFTGITLVSLVSFWDDIQSLSNKIRISVHFVAITLIFYDLGLFSLVPIWGVLIAYVLAIGLINAYNFMDGINGITGLYTLIVLGALLYVNTKLQLFTDGNFIKYGMIASLVFLFFNYRKKAKCFAGDVGSIAIAFWIIYLVLKLILITNSVIWLLFLAIYGVDAVCTIIHRLYLKQNIFEAHRLHLYQVLSNEYKIQHRLVSLYYAIAQTAVSALVIFLYQKVNDIVLFIIVVTPLLLLYSLKFYLLNKINLKLKA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB55363.1|327001_328285_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.2e-10	26.8
AXB55364.1|328348_329212_-	ABC transporter permease	NA	NA	NA	NA
AXB55365.1|329343_331311_-	polysaccharide biosynthesis protein	L7Y3T9	Megavirus	1.7e-30	30.5
AXB55366.1|331396_332281_-	glucose-1-phosphate thymidylyltransferase	H9NC64	Sphingomonas_phage	1.4e-101	64.1
AXB55367.1|332356_333202_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.1e-37	36.9
AXB58934.1|333201_333750_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.5e-40	49.4
AXB55368.1|333764_334898_-	pyridoxal phosphate-dependent aminotransferase	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	6.5e-14	27.7
AXB55369.1|334890_335316_-	hypothetical protein	NA	NA	NA	NA
AXB55370.1|335312_336278_-	UDP-GlcNAc--UDP-phosphate GlcNAc-1-phosphate transferase	NA	NA	NA	NA
AXB55371.1|336327_337260_-	GDP-L-fucose synthase	M1HVW2	Paramecium_bursaria_Chlorella_virus	6.4e-108	61.0
AXB55372.1|337308_338427_-	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	2.7e-121	62.2

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>CP030261|719872:725993|DBSCAN-SWA
AATGAACAAAGGAAAATTAATTGTTTTTTCAGCACCGTCTGGATCAGGAAAAACAACTATAGTAAAACATTTACTAGGGAAAGAAGATTTAAACTTAGAATTTTCGATCTCAGCGGCTTCACGCGATCCACGCGGAGAAGAGGAACACGGAAAAGATTATTATTTTATTTCGTTAGAACAATTCAAAAAACACATTAAAGCCGAAGAATTCCTAGAATGGGAAGAAGTATACCGCGATAATTTCTACGGAACTTTAAAAGCCGAAATCGAAAGAATCTGGGCGATGGGAAAAAATGTAATTTTTGATATTGATGTTGCCGGCGGTCTTCGAATCAAACATAAATTTCCAGAACAGACTTTAGCCGTTTTTGTAAAACCTCCAAGTGTTGATGAACTCAAACGCCGATTGAAACAACGTTCGACAGAGAGCGAAGATAAAATCAATATGAGAATTGCAAAAGCTTCTGTTGAATTGGCTACAGCTCCTCAGTTTGATACTATTATCAAAAACTATGATTTAGATACAGCAAAAGAAGAGGCGTATCAATTGGTAAAGGATTTTGTCTCTAAATAGTTATTTAGTCTTTAGCTGTTAGTCCTTAGTCTGAGAAGAAATTAAATTAAACATTTACATGAGCGGCATTAAGTCCTATAAAGAATTATACATTTGGCAAAAAGGAATAAAAATAGTTCTTCTAGTATATAAAATCACAAAGAGCTTTCCTAAAGAAGAAATATACGCTTTAGCAAATCAATTAAAAAGGGCCAGCGTATCTATTCCTTCAAATATTGCGGAAGGTTTTGCGCGTCAAACCGACAAGTCATTTAACCATTTTTTGAATATTTCAAGAGGTTCTCTAAATGAGATAGAAACACAATTAATTATTGCAAAAGAATTAGAATTTATTTCTGATGACAATCTATTTAATGAGATTATGTCTTTAATTGAAGAAGAAAGTAAAATGATAAGTGCTTTTTGTAAAAATCTCAAAGACTAAAAAACTAAGGACTAAGAACTAAGTACTATAAAATGAAGATAGGCCTTTATTTCGGAACATATAACCCCATTCATGTTGGTCATTTGATCATTGCCAATCACATGGCTGAGTTTGCAGATTTGGATCAGATTTGGATGGTCGTTACACCTCATAATCCGTTAAAAAAGAAAGCTACTCTGCTGGATGATCATCATCGTTTGCAAATGGTTTATCTGGCGACGGAAGATTATCCAAAAATTAAACCATCGGATATTGAGTTTAAGTTACCTCAGCCGAATTATACGGTCATTACTTTAGCTCACTTGCAAGAGAAATATCCCAATCATGAATTCTCTTTGATAATGGGAGAAGATAATTTGAAAACGCTTCATAAGTGGAAAAATTACGAAGTGATTCTCGAAAACCATGACATTTATGTTTATCCGCGTATTTCTGATGAACCTGAGAATACGGAATTAAAATCTCATCCAAAAATTCATGTAATCGATGCGCCAATTGTAGAAATTTCTTCGACTTTTATTCGAAACAGCATAAAGGAAGGAAAAAATATTCAGCCTTTATTGCCTCCAAAAGTTTGGGAATATATCGATCATAATAATTTTTATAAAAAATAAACAACTTGAATTGCCTTCAGTTTTAACTGGAGGTTTTTTATTTTAAAAAATCATTCCGTAGAATGTATCGTCGGTAGAATTAAATTTGAATTATGATGATGCGTTCCTTAGGAACGTTTGATTAATGAGGTTTGCCATTTCCACAAAACAAGTGTCCCTACAGGACACAACGCAAAAACGATACTATTTTTTTCTACCGATGAGATATTCCTACGGAATATAAAATATTGTTTTTGATAAAATTAATTACATAAAAAAACCTGAACTTACGTTCAGGCTTTTGCTTATTATTATGCTTCAACATTAACTTCACTTTTAACTCGGCTTCTAATCTCGCTTAGCGATTGATCTACTAAAAGTTTTCCATCTCTGAAAACCTCCTTCAATTCGCCTTGTTTTTCTTCTTCCCAAGAAACATTATCTGTTAAATGATACTTGCCGTCGATTAAATCAATTTTCATTAATCCTTTGGCAGATTTTTTAGTTCCGTCATCAGTAATAGGATCTTTGAAGATGGCTCTTCCCTGTCCGTTTACCTCTCCGTAAGTTGCTTTCATGGCAAAACCAAAAGTATCTCTAGTATTATATTGGTAAGTAAAAGATCCAATTCCTAGAACTACATTGGTAGAAGCAAAACCTTTTGCTTTCAATCTTTCGCAGATCTGAGTTGCTCTCGCCACCGTAATACTGTCGCCGTAAATTGCTCCGATTTGTGGAACTAATTCCTTAAAGCCTTTGTCATTCAACGTTCCGCCAAAAACATCCCAAATTAGCTCTATTACGCCTTTCTTTTCTTGTTCTGTTTTACCATTCGGATTGCCGCAGATAATATCAACTGGATCACCGCTGTCAGGACGAATTACGACTTTACCTTCTCTTGAAACAATTTCTTCTTTTAATCTCGGAAGATAGTCGGTTAAAACTTTCCATAAATCCCAAGTATCAGAAACGATAGAAACAATTCCTTTTGGATAGACTTCTGTGATTAATCTTTTAAATGTTTCATACTCGCCTTCTGTAGTTCCCATGCACATTACAGAATGTTCTGTCGCTGCCACTGAACCTGCAACAAGTTCTAAATCTGAATTGGCATTATAATATTCTTCAAGAAAATCGATTACGGGAATGGTATCAGATCCTGTAAAATTCAATAAATGTCCAGCTGCTGATGTTATTGATGCTTCTATTCCGCCCATTCCTCTCATTGAAAAATCGTGTGCCTGCCAATCTACAAATTCTGGTACCGAAGAAGTTTCCGTCGCATATTTGTCTAAAACTTTTCTGTATTCTTTTGCAATTGTCGCTGAATTACAAGGAAGCCAAACTACTGCTGAAAGTAATGTTTCGAAATAATTGGTCAGCCAGAAAAACTCCGGAATTGTATTGTACATCGTAAACATTGGAACTCGCAACGGAACGCTCGTTCCTTCTGGCAAAGCTTTAAACACCATCGGAATATATCCTAGATCGTGTAAATCTTCAATATGTTTAGTTCCAACTTGGTTTTCGCCCAAATAATTATTGATTCTTCGAGCATATTTTGCAACCACTTCTTCTTTTGATTTTTTAAAGAAATACTCTTCAAAGTCATGAATAATATATTTTTTGATGAAATACTGCAATCCGAAAAATACAACTTCATCAACTTCTTCTAATCTTGATTTTCTAGGTGTCCAGTTAGAATATACTAATGTTGTTCCGTCTGGGTATTGTCTTCTATGGTCAACTTTATAACCGTCTGTTAATAATAGTGGGTTCATATTTTTAGTTAATTTAATTAATTATTATTACATTAAAAATCGATATACTTTGCTGGAACTTCATCTGTAAGCCAGACATTGTTATCAGACAAATAAAACTTAAATCCGTCTCTGTGCATAGCACCACTTCTAACGGTTAAAATCTGAGGAGTTCCTCGTCTGCTTCCTACTTTAATAGCGGTTTCTTTGTCTTTTGAAAGGTGTACGTGCTGACGGCTCATTTTCTGCAAACCTTCTTTTTTAATGTTCTCCAGAAATTTTCCAACCGTTCCGTGATACAAATATTCCAAGGGTTCTGTTTCTGCTAAATTCAATTCAACTGAAATAGAATGTCCCTGACTTGCACGGATTTTTGTTTTGTTTTCATTAAATGCGAAACGTTTTTTATCGTTGCTTTCTACAACATAATCTAAAAGTTCAAAATCCAATTTATTGCCTTTTTGAGAACATTTAGAAATTAATTCCTCTACATCTGCCCAGCCGTTTTCATCTAATTTTAAATTTATAGTTTCTGGCGAATGTCTAAGCACCAGACTTAAAAATTTGCTGACACTTTTTGCTATTTTTTCATTCATTACCTACGAAATGTTCCTATGGAACATCTTCAATTTTTATAATTTCTAATTATTTTAAATCGTCCCTAACCTCCATCAAAGCAAATCCTAAAAGATTTAAACCTTTCCATTTCGCCGGATTTAAAACATCTTTGTCATCACCTGCCATACCAATTCCCCAAATTGCGTCGACCGGACTGGCCTCAACGATCACTCTGTTTTTTGTGTTTAGTAAAAATGTTTTCAAATCAGGATTTTGGCTAAACTTATGGTAATTTCCTTCTTTTACAATTTCGTATCTGGCCGCCAACCAAAGAGTTTCATTATAATTCTTTACTTCTCTTCCAAGCTTTTTGGCTTCAGCAGGAGATTTGGCCATAAGGATTTTCATCAAAACCTTATCATCATTAAATAATTCTGCTTTCTTTGCCATCATCCAATGTTCGGCAGTTTTGTAGGTTACTTTTTCAACTTCAAAAGAACTTAACCACCACTGACTGAAGCAGGTTTTAGTAATCGTCCCATCTTTACTCGGCTGATGTCCCCAGAAAAACAAAAACTTACTTTCTTGGGCTATATTATCTATATTGTATTTCATATTAATTGATCTAACTTAATTTGAGTAACTCGTTCGTTATCAAAATCTTTGAAAGAATTTGTGGTAAAGATTTTGTCAAAACAATCTAAAACTTCAAATCCTTTATTAAAAATGCCGTGGCTTACTGCTAAATATAATTTGCCGGCATTTTTGTTTTTTAATTCTTCGGCCAAACCGACAAAAGTTCCGCCTCCGTCGCAAATATCATCGACAATTAAACAGTCCATTCCGTTTAAATCATCTTCGTAAACTTTAAAACCAGACAATTTTCCAGTTTTCACATCTCGGCTTTTACTGCATTCTACAACTTCAACTCCGCCTAAAAATTCAGAAACTTTGTAGATTTTCTTTAAAGCACCGCCATCTGGAGAAATCAATTTTACATTTTCACCAATTATCTTTAAAATTTCCTGGATAAAAGTATGATTTGGGATTACAGTGCAATTGTTAACCAACGCTGGTGTAACTTCAGAATGTGCATCAAAAACAAAAACTTTATTTAATTGCAAGCCGTTAATAATATCAGCGTAGACTTTTACAGATAACGGTTCGCCCGGAATCATGACACGGTCTTGTCTTGCCGCTGGAAAATACGGAATAAAGAGATCAATTATTTTGACATCCATTCTACGTAACGCATCAACTGTAATGCATAATAATCCTAAATCATTGAATGAATTTAATCGGTGTGTAATTGTTATTTTTTGAGTTGTATCGAAATCTGGATTGATTTTAATGTGTGGTTCTCCGCCAGAAAATGTGAAACTTTGAAATTTGATTTCTTCCTGATTTTGAAAAGGAGAAAATTTTGGGTCAAGATTTAGTATCATAATAGTATTATTTTGCGTTAATTATACGCAAATGTAGAATTAAATTTTAAATAAACAATTTATTTTGTGTAAAAATTACGCAAACTTTATTTCGAAGTGAAACCCTTCCTTGATTAACTCATTGTATTTTAATTTGTTAAACCTAAAAAGTTTGGCGGGACGACCTGTTTTTATTGGTGAAAAATTTTCTGTTTGTTCTAAAATACCGTAACTCAATATTTTTTTTCTAAAATTTCGTCGGTCAATTTCTTTTTCTAAAATGGTACAATACAAATTTTCAAGATCAGAAAACAGGAATTCCTCCGGAAGTAAATCGAAACCAATTGGCTCGTAAGTCAGTTTACCTTTTAGTCTCTGAATCCCTTTTTCCAAAATTAAATTATGATCGAATGCTAAAGGTGGAATTTCATCTATTTTAAACCATTGCACTTTTTCGGCATCCGTATTAGCTTTAATTTCTAGGTTCGAAGCGTCAACCAATGCATAATAAGCCACCGAAATAACTCGATTTCTGGAATCTCTATAAATATCATCTCCAAAAGTGTACAATTGCTCCATAAAAGTCAGCTGTACATTGGTTTCTTCATGCAATTCACGAATAACCGCATCGCTCAAAGATTCGTTATCTTGAACCAAACCGCCTGGCAAAGCCCAATATTTTTCTGAAGAACCAAATTGCTGCTCAATCAACAACACATACAAATCACTGTTTTTGTATCCAAAAACAATCGCGTCGACAGCAATTCTAATATTCTGTAATTTTTCCAT

Protein sequences of DBSCAN-SWA_2

>CP030261|719872:725993|725300_725993_-|AXB55707.1|DBSCAN-SWA
MEKLQNIRIAVDAIVFGYKNSDLYVLLIEQQFGSSEKYWALPGGLVQDNESLSDAVIRELHEETNVQLTFMEQLYTFGDDIYRDSRNRVISVAYYALVDASNLEIKANTDAEKVQWFKIDEIPPLAFDHNLILEKGIQRLKGKLTYEPIGFDLLPEEFLFSDLENLYCTILEKEIDRRNFRKKILSYGILEQTENFSPIKTGRPAKLFRFNKLKYNELIKEGFHFEIKFA
>CP030261|719872:725993|720503_720869_+|AXB55701.1|DBSCAN-SWA
MSGIKSYKELYIWQKGIKIVLLVYKITKSFPKEEIYALANQLKRASVSIPSNIAEGFARQTDKSFNHFLNISRGSLNEIETQLIIAKELEFISDDNLFNEIMSLIEEESKMISAFCKNLKD
>CP030261|719872:725993|721773_723243_-|AXB55703.1|DBSCAN-SWA
MNPLLLTDGYKVDHRRQYPDGTTLVYSNWTPRKSRLEEVDEVVFFGLQYFIKKYIIHDFEEYFFKKSKEEVVAKYARRINNYLGENQVGTKHIEDLHDLGYIPMVFKALPEGTSVPLRVPMFTMYNTIPEFFWLTNYFETLLSAVVWLPCNSATIAKEYRKVLDKYATETSSVPEFVDWQAHDFSMRGMGGIEASITSAAGHLLNFTGSDTIPVIDFLEEYYNANSDLELVAGSVAATEHSVMCMGTTEGEYETFKRLITEVYPKGIVSIVSDTWDLWKVLTDYLPRLKEEIVSREGKVVIRPDSGDPVDIICGNPNGKTEQEKKGVIELIWDVFGGTLNDKGFKELVPQIGAIYGDSITVARATQICERLKAKGFASTNVVLGIGSFTYQYNTRDTFGFAMKATYGEVNGQGRAIFKDPITDDGTKKSAKGLMKIDLIDGKYHLTDNVSWEEEKQGELKEVFRDGKLLVDQSLSEIRSRVKSEVNVEA
>CP030261|719872:725993|724391_725225_-|AXB55706.1|DBSCAN-SWA
MILNLDPKFSPFQNQEEIKFQSFTFSGGEPHIKINPDFDTTQKITITHRLNSFNDLGLLCITVDALRRMDVKIIDLFIPYFPAARQDRVMIPGEPLSVKVYADIINGLQLNKVFVFDAHSEVTPALVNNCTVIPNHTFIQEILKIIGENVKLISPDGGALKKIYKVSEFLGGVEVVECSKSRDVKTGKLSGFKVYEDDLNGMDCLIVDDICDGGGTFVGLAEELKNKNAGKLYLAVSHGIFNKGFEVLDCFDKIFTTNSFKDFDNERVTQIKLDQLI
>CP030261|719872:725993|723867_724395_-|AXB55705.1|DBSCAN-SWA
MKYNIDNIAQESKFLFFWGHQPSKDGTITKTCFSQWWLSSFEVEKVTYKTAEHWMMAKKAELFNDDKVLMKILMAKSPAEAKKLGREVKNYNETLWLAARYEIVKEGNYHKFSQNPDLKTFLLNTKNRVIVEASPVDAIWGIGMAGDDKDVLNPAKWKGLNLLGFALMEVRDDLK
>CP030261|719872:725993|719872_720445_+|AXB55700.1|DBSCAN-SWA
MNKGKLIVFSAPSGSGKTTIVKHLLGKEDLNLEFSISAASRDPRGEEEHGKDYYFISLEQFKKHIKAEEFLEWEEVYRDNFYGTLKAEIERIWAMGKNVIFDIDVAGGLRIKHKFPEQTLAVFVKPPSVDELKRRLKQRSTESEDKINMRIAKASVELATAPQFDTIIKNYDLDTAKEEAYQLVKDFVSK
>CP030261|719872:725993|723275_723818_-|AXB55704.1|DBSCAN-SWA
MNEKIAKSVSKFLSLVLRHSPETINLKLDENGWADVEELISKCSQKGNKLDFELLDYVVESNDKKRFAFNENKTKIRASQGHSISVELNLAETEPLEYLYHGTVGKFLENIKKEGLQKMSRQHVHLSKDKETAIKVGSRRGTPQILTVRSGAMHRDGFKFYLSDNNVWLTDEVPAKYIDF
>CP030261|719872:725993|720901_721483_+|AXB55702.1|DBSCAN-SWA
MKIGLYFGTYNPIHVGHLIIANHMAEFADLDQIWMVVTPHNPLKKKATLLDDHHRLQMVYLATEDYPKIKPSDIEFKLPQPNYTVITLAHLQEKYPNHEFSLIMGEDNLKTLHKWKNYEVILENHDIYVYPRISDEPENTELKSHPKIHVIDAPIVEISSTFIRNSIKEGKNIQPLLPPKVWEYIDHNNFYKK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXB55700.1|719872_720445_+	guanylate kinase	A0A1W6JK60	Lactococcus_phage	4.7e-13	33.6
AXB55701.1|720503_720869_+	four helix bundle protein	NA	NA	NA	NA
AXB55702.1|720901_721483_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
AXB55703.1|721773_723243_-	nicotinate phosphoribosyltransferase	A0A218KC49	Bacillus_phage	4.9e-155	56.7
AXB55704.1|723275_723818_-	RNA 2'-phosphotransferase	A0A2R2ZGT8	Clostridioides_phage	1.7e-52	53.0
AXB55705.1|723867_724395_-	DUF1768 domain-containing protein	A0A0E3TB23	Enterococcus_phage	1.0e-38	47.6
AXB55706.1|724391_725225_-	ribose-phosphate pyrophosphokinase	A0A291LA84	Escherichia_phage	2.4e-45	42.6
AXB55707.1|725300_725993_-	NUDIX hydrolase	A0A1V0SIB1	Klosneuvirus	5.0e-09	34.2