CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	1 crisprs	NA	2	1
CP030275	Rhodobacter sphaeroides 2.4.1 plasmid pC, complete sequence	0 crisprs	NA	0	0
CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	0 crisprs	NA	0	0
CP030272	Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence	0 crisprs	csa3	0	4
CP030271	Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence	0 crisprs	csa3,DEDDh,cas3	0	7
CP030276	Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence	0 crisprs	csa3	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP030273_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030273_1

67197-67275

Orphan

Consensus_repeat	Method
TTGTTTCGCGCGCGAAACAAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP030273_1

>merge|CP030273|1|67197-67275|CRISPRCasFinder
TTGTTTCGCGCGCGAAACAAATCGGGGGGTCGGCAGGGCGGCACGGCGGGGGCAAATTGTTTCGCGCGCGAAACAAATC

>CP030273|1|1|67197-67275|CRISPRCasFinder
TTGTTTCGCGCGCGAAACAAATC	GGGGGGTCGGCAGGGCGGCACGGCGGGGGCAAA
TTGTTTCGCGCGCGAAACAAATC

Protein	Signature genes	Signature genes Name	Protein_function
CP030273.1\|AXC63813.1\|69557_70697_-\|sugar-transporter	unknown	unknown	gnl\|CDD\|226055
CP030273.1\|AXC63801.1\|57829_58555_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
CP030273.1\|AXC63811.1\|67305_68421_+\|nuclease	unknown	unknown	gnl\|CDD\|274586
CP030273.1\|AXC63814.1\|71425_72226_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
CP030273.1\|AXC63805.1\|61413_62454_-\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
CP030273.1\|AXC63809.1\|65339_65672_-\|hypothetical-protein	unknown	unknown	unknown
CP030273.1\|AXC63818.1\|77656_78958_+\|DUF2793-domain-containing-protein	unknown	unknown	gnl\|CDD\|371324
CP030273.1\|AXC63817.1\|75695_77054_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226081
CP030273.1\|AXC63819.1\|79139_80081_+\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
CP030273.1\|AXC63820.1\|80196_81519_+\|hypothetical-protein	unknown	unknown	unknown
CP030273.1\|AXC63816.1\|74545_75538_+\|hypothetical-protein	unknown	unknown	unknown
CP030273.1\|AXC63807.1\|63084_64023_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
CP030273.1\|AXC63804.1\|60565_61417_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
CP030273.1\|AXC63802.1\|58921_59704_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|366246
CP030273.1\|AXC63815.1\|72289_74545_+\|glycosyl-transferase-family-1	unknown	unknown	gnl\|CDD\|379549
CP030273.1\|AXC63806.1\|62457_63021_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|376414
CP030273.1\|AXC63808.1\|64073_65036_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|370826
CP030273.1\|AXC63810.1\|65726_67181_+\|chromosome-partitioning-protein	unknown	unknown	gnl\|CDD\|274585
CP030273.1\|AXC63812.1\|68719_69541_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213187
CP030273.1\|AXC63803.1\|59678_60569_-\|glucose-1-phosphate-thymidylyltransferase	unknown	unknown	gnl\|CDD\|130274

Protein	Function_ID	Function_description	E-value
CP030273.1\|AXC63813.1\|69557_70697_-\|sugar-transporter	gnl\|CDD\|226055	COG3524, KpsE, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	1.37396e-72
CP030273.1\|AXC63801.1\|57829_58555_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	2.53227e-11
CP030273.1\|AXC63811.1\|67305_68421_+\|nuclease	gnl\|CDD\|274586	TIGR03454, partition_RepB, plasmid partitioning protein RepB. Members of this family are the RepB protein involved in replicon partitioning. RepB is found, in general, as part of a repABC operon in plasmids and small chromosomes, separate from the main chromosome, in various bacteria. This model describes a rather narrow clade of proteins; it should be noted that additional homologs scoring below the trusted cutoff have very similar functions, although they may be named differently. [Mobile and extrachromosomal element functions, Plasmid functions].	9.68349e-12
CP030273.1\|AXC63814.1\|71425_72226_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	2.5419e-33
CP030273.1\|AXC63805.1\|61413_62454_-\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
CP030273.1\|AXC63818.1\|77656_78958_+\|DUF2793-domain-containing-protein	gnl\|CDD\|371324	pfam10983, DUF2793, Protein of unknown function (DUF2793). This is a bacterial family of proteins with unknown function.	3.80205e-32
CP030273.1\|AXC63817.1\|75695_77054_-\|hypothetical-protein	gnl\|CDD\|226081	COG3551, COG3551, Uncharacterized protein conserved in bacteria [Function unknown].	4.52734e-49
CP030273.1\|AXC63819.1\|79139_80081_+\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	2.71163e-15
CP030273.1\|AXC63807.1\|63084_64023_-\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.06441e-72
CP030273.1\|AXC63804.1\|60565_61417_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.37587e-123
CP030273.1\|AXC63802.1\|58921_59704_+\|sulfotransferase	gnl\|CDD\|366246	pfam00685, Sulfotransfer_1, Sulfotransferase domain.	7.28903e-11
CP030273.1\|AXC63815.1\|72289_74545_+\|glycosyl-transferase-family-1	gnl\|CDD\|379549	pfam14307, Glyco_tran_WbsX, Glycosyltransferase WbsX. Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.	9.36814e-151
CP030273.1\|AXC63806.1\|62457_63021_-\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|376414	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.	5.08975e-99
CP030273.1\|AXC63808.1\|64073_65036_-\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|370826	pfam10134, RPA, Replication initiator protein A. Members of this family of bacterial proteins are single-stranded DNA binding proteins that are involved in DNA replication, repair and recombination.	2.32126e-121
CP030273.1\|AXC63810.1\|65726_67181_+\|chromosome-partitioning-protein	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	9.92759e-59
CP030273.1\|AXC63812.1\|68719_69541_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	1.78218e-89
CP030273.1\|AXC63803.1\|59678_60569_-\|glucose-1-phosphate-thymidylyltransferase	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.32712e-162

>CP030273.1|AXC63810.1|65726_67181_+|chromosome-partitioning-protein
MAETRGRKTAGRGRVEMRKSPPAREPQVPLPPYFNISPDAALAELEAPLTTAGFAEIARSCAQGRDDLAARGLDAEGRRSLRLFSTWEITRYLIPVATAHFRRVLKANPDLPQGISETEGGAKWFTLDEVLRLRAHFAAEGSKAKEYRPYRPAGLPAKLVAVANFKGGVGKTSTAAHLAMSAALDGYRVLVIDLDSQGSMTSIFGGRVADEWGTVFPLLARHYAAHLQAENRARVARGDPPVPMDETLTEAQKIRAGDLIAKTHWPNIDLIGAQLNLYWAEFQIPVWRMQGRSWKLWDALTDVLAEDGVLDRYDVIFLDTPPALGYLTINGLAAADILLVPLGASFLEFDSTGRFFDMLHSTFRSIEEGENIAARALGREELAFEWDAVRAVLTRYDGAQQAEMAALMQAYMGRTMAPERQDFTALIGQAGEQVNGIYEADYRDFNRDTYIRGRETFDATYAAFKRLLVGIWRREELAAADAAE
>CP030273.1|AXC63809.1|65339_65672_-|hypothetical-protein
MRIWQFSAHIARQLSGFSKRFPRLASHGGRGPLKRRGLPASVSFGLYIVTGSGGFGQVLEETRERGGSGKPLRLRNPEDPTPKPRFSDSGTPIFRPGARAPCWTDGAACA
>CP030273.1|AXC63808.1|64073_65036_-|RepB-family-plasmid-replication-initiator-protein
MADFFICDILDALPKDDMASMEHPVFSLATRPDLRVLDYAHNGVRITVTPSVRGLATLFDKDILIYCVSQLMAALNAGRAISRTLHLTAHDLMTATHRETSGDGYQRLREAFERLAGTRITTNMEVGGREITTGFGLIESWQIVRRSRGGRMVQVMVTLSEWLFQAVLTKSVLTLSRDYFRLRKPLERRIYELARKHCGQQPEWRVSIATLAKKSGSASPLRVFRKMIRDMIAADSLPGYSLAEEPGDLLCVTRRAAVLAPGLAPALRDTTLERVRARMPGWDVHALVAEWHAFWHSSGQPRLRSADAAFLGWIERRVPG
>CP030273.1|AXC63807.1|63084_64023_-|glycosyltransferase
MTDAPPPRIALLLATYNGAANLEAQLESFAAQTLRPTWLVVSDDGSTDATRALLAAFAARHPWLALRLVEGPCRGSAQNFLHLLGQVPPEADMAALSDQDDVWLPEKLARGAAAMADLPADLPVLYGGSSWICDAELGNRRPYPLPVRPPGFRHALVQNIAGGNTMMLNRGAIALLAAASREPERIVVHDWWIYQIVSGAGGRVIFDPVPLLLYRQHGGNLIGANDGFRAKYRRLRMLLSGGFRQWNAINIRALSASAHRFTPENRRLLAEFEALRRAGPWGRLRQLKRIGLYRQGLPGRLSLWLAAVLGRI
>CP030273.1|AXC63806.1|62457_63021_-|dTDP-4-dehydrorhamnose-3,5-epimerase
MQIEETELPGVLILTPRVFGDARGSFCEAWNRATLQGLGIDLDFVQDNQSISAPVGTVRGLHYQAPPHAQDKLVRVGHGAILDVAVDVRVGSPTYGRWVGVELTAGNARQLLVPKGFLHGFVTREPDTVVLYKTTDVYAPDCDGAVHFADPDLGIDWGIDPASAVLSDKDARAPRFADWTSPFSIEV
>CP030273.1|AXC63805.1|61413_62454_-|dTDP-glucose-4,6-dehydratase
MKLIVTGGAGFIGSAVVRKAVADGHHVVNLDCLTYAACLDNLASVAGAPNYVFEKADIRDAEAMARIFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYWVGQGKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETYGLPYVLTNCSNNYGPFHFPEKLIPVVILKALAGAPIPVYGKGENVRDWLYVEDHADALLTVLARGENHRSYNIGGENEAKNIDIVRKICAILDARRPKATPYADQIAFVTDRPGHDLRYAIDPTRIRTELGWRPSVTLDEGLERTVDWYLANEPWWRALQDRAGVGERLGVKA
>CP030273.1|AXC63804.1|60565_61417_-|dTDP-4-dehydrorhamnose-reductase
MILVFGRTGQVARELARQAPDARFLGRDEADLADPEACARAIREAKPDAVINAAAWTAVDRAEEEEAPATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGAYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPTPAADIAAACLAMARGLAARPDLSGTYHLSGGPDVSWADFAREIFRQAELDCLVADIASADYPQKAHRPANSRMDCSDLARFGLSRPDWRQGLARVLADLQEVSE
>CP030273.1|AXC63803.1|59678_60569_-|glucose-1-phosphate-thymidylyltransferase
MSVRKGIILAGGSGTRLYPLTIGVSKQLMPVYDKPMIYYPLSVLMLAGIREIAIITTPQDQEQFRRALGTGAQWGISLTYLVQPRPEGLAQAYTIAEEFLAGSPSCMVLGDNIFFGHGLPDLLALADAKTEGGTVFGYHVADPERYGVVAMDERGRVTQIVEKPKVAPSNYAVTGIYFLDARAPDLVHGIRPSERGELEIVSLLEIYLEEGLLDVQRMGRGFAWLDTGTHASLLDAGNFVRTLQLRQGMQTGCPEEIAFARGWVDAEALTGMAAQLSKNDYGRYLQGLLTDRMMEG
>CP030273.1|AXC63802.1|58921_59704_+|sulfotransferase
MRAASPRVRFLVAGAQKCGTTALHRFLSAHPGLFLPAGKELHFFDRPLPDDWSGPEGPLYETAFAQARPDQLCGEATPVYLFHTPSLQRIRAYNPAMRLILLLRDPVLRAYSHWRMERTRGAETLPFPEAIRAGRARVAEDWRTFSYVERGFYGAQLTELERLFPREQRLVLWTDEMQRDHAGTLARIWRFLGCAAPPVPPPPAEIRPLDPAPGLAPLAEEDARYLRSLYAPDIALTEALTGRDLSLWREGALSPPSSGR
>CP030273.1|AXC63801.1|57829_58555_+|sulfotransferase
MDRDLPETPALVLGASGGSGTRVAGQLLRAAGGYLGGARNEAGDSLALVAAIEALAARGARLLEGGRPEEADLALWRAALTEHLALHAGEPFWGWKNPRSMFLLPFSVALVPGLRFIHMVRDGRDMALSGNRRQYERHVPEGPGTPADRARFWAESNLRVKRHAEAVLGDRYAILRFEDLCRDPEGCMARLGRQFGLRLEPAGTGIEVRPPDGVGRHRALPAADRAAVEAAAAPAMEAFGY
>CP030273.1|AXC63811.1|67305_68421_+|nuclease
MAKRKRLTLPPLGGFAPGPASASEASPAPASPPALGPGLAPAPISRVTGEAAATAALREVAEELGAARSEGRLVLRLELDRIEEGWLVRDRIGLEAEELASLMTSLSAHGQRSPIEVTDMGEGRFGLISGWRRVTALRRLHAETGEERFATVLALLRRPDTAAAAYVAMVEENEIRAGLSYFERARIAAKAVEAGVFATDKLALQQLYGSASRAKRSKIGSFLGIYRALEGALRYPSALPERLGLALARRLEEEPGVAAKITAALAAAAPDSAEAELALIADLLAPAAEAAPEQEPARPSAPDPAPDAPAPAPAPDPAPAQPRSTRPPAPAAELRPGLFLKAEGAGSLHLYGPAVDETFRARLRDWLASEG
>CP030273.1|AXC63812.1|68719_69541_-|ABC-transporter-ATP-binding-protein
MIELRNVSKSYVLNGTRKVVARDLNFTFPSGESVGLLGRNGAGKSSLLRMLAGTMLPDTGEILSSGTISWPVGFSGSFHPELTGAQNVRFVARLYGVDTEAMIAFVRDFAEIGQHFHLPVRSYSSGMRSRLAFGISMAVPFDTYLIDEVTAVGDAAFSAKSNAILRARLEESGAVIVSHSMPLLKKLCRSGAVLHDGQLFYYERIEQAIRHHESMMRGALPRWMRGDLDEGEGEEAGAAAPGPRARARAGAARAGGGRAARPGPASGTSEPRG
>CP030273.1|AXC63813.1|69557_70697_-|sugar-transporter
MPAAAPRAAARLRHHGLLASFLGLVLAPILASGLYLFAIAEDQYTSTVGFSVRTEEMGSALDLLGGLSSFGLTGGGSASDSDILYQFIQSQELVQRINERIDLRAIYSKPGFDPVFSFDPDGGIEDLVDYWKDMVRISYDSTTGLIELRVHAFTPEDAQAVAQGILDESNRMINDLSAIARADATRYAREELDNAVERLRVQRVAMTEFRSRTQIVDPSADIQAQMGLLNTLQQQLASASIDLNLLRQTTQPSDPRIAQNERRIGVIEELIQREREKFGLGGGTGTGASTYSTMIAEFERLTVDLDFAEKAYIAALTNHDAAIAEAQRMSRYLATYVRPTLAQQSLYPQRGLLTLMIGGFALMLWAIGMLIYYSVRDRR
>CP030273.1|AXC63814.1|71425_72226_+|sugar-ABC-transporter-permease
MTGLSGLLAGRRFLWGRSVLSLMLREMATSYGRSPGGYLWAVAEPVAALTLLTVVFSFLMRSPPLGNNFPLFYATGYLPFMYYTALTAKIGQAIRFSRPLLAYPAVSFFDAILSRFLLNTLTNLVVFVIVMVGIIAFYDLNVSLDLPAILEAFSMAAALAMGVGTLNCYLFSVAPVWERVWAILNRPMFLLSGIFFLMETVPEPFRTLLSYNPLTHVIAKMRQGFFATYDARLVDPLYAYSVSLVCLFFGMLLLNRHHRMLLNEGA
>CP030273.1|AXC63815.1|72289_74545_+|glycosyl-transferase-family-1
MLKFHRLRRFARILVLTGEERRYLRAIRKSGLFDRTYYRGAYPGLNPIYLKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKELPEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYRGEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQDGDLWRKHLIEGILPETGLEEKLEAFVEAPEAGFWVADGQHYTGTQWWGSNVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQVDGTLAHAIERVLGYLTARAGQKVLQTSELRPAAAAAPAKPAFVSAFYLPQFHPVPENDAWWGKGFTEWRSVVKAPSMFEGHLQPMLPADLGFYDLRATEVMGEQAAMAREAGIDAFCVYHYWFDGRRILEAPIDRLMARPEIDFPFYLCWANESWRRNWDGLSGTVLLEQTYGAGFEEKLAADTAPYLRDPRYARPDGRRPRFVIYRPEDMPDPQASVARLREGWRRAGIGEVELGAVRFHVEGAHPVPEGLFDFWVEMPPHGLVKGPDYLFGGPDGNRMPAAMNPAFSGLIYDYAAVARRALSETYVRTLPKATIAGVMPGWDNTARRGAAGHVAYGANPATFNVWLAGALERRVPASYRRELFVNAWNEWAEKAVLEPSLTFGDLNLQVMRQHLGAAEPATHLAEPPAHGMRSH
>CP030273.1|AXC63816.1|74545_75538_+|hypothetical-protein
MARVVLHIGTHKTATTTIQDMFAHNADLLRQHGVIYPRLSRVAGHHGLVMEWNKLPDMYALPQGSIATLKQLTRDYAHVPGTLVLSSEEFSRGKPGAQVDFRAVRELLSDFESVSVVCVLREQWQFMQSIYLQASKERQPPKPSTMVDSVLKRDMTDGLWIDYNLLYDHLLSAFAPEEITFLDFDACRRHRDGVVGAMLDTLGCGLSASSLQVVHDGLSNVSPLALPTFAACVITEPDQAAPWVIDCATGAFRIEYGEEAKSCLWTYPEFQQLFAYAKERNGRLSERRKAVQPEFRISESDPEENRVYRDGLNTSFWIRCSRWIYRARRG
>CP030273.1|AXC63817.1|75695_77054_-|hypothetical-protein
MTSDQTPARPALLVLGMHRSGTSALAGVLGRAGFALPQELMPPTEHNPRGYFESTRIFRLNDALLAAAGSSWDDWRAFDADWHLSPAAEPFHAEAQEALAAEFPGTAPIVLKDPRICRLLPFWTRALTEAGFRPLAVCTHRPAREVGASLARRNGWPEARGLLLWLRHVLDAEAQTRGRPRVFVSYDGLLADWRGTLGRIAEAFDLALPRPLDEAAPEIEAFLSADLRHAPETPAAAAGLSDWIARPEEILDRKAAGEDRPGDRETLDRIAAEVAAAAPLLADLSGAVEEQGARLEREAALRHEAQTILQQERQRLDDLTAELQLQLHHRTLHVAELERHAGELAQQLRQKTQHAAELERHAEELAQQLRQQRSHAAELERHAGELSALTHELRQQVHHKGRHVQELEAHSGELEARLLALEAEHAALLGSTSWKVTHPLRRMSLALRRPKT
>CP030273.1|AXC63818.1|77656_78958_+|DUF2793-domain-containing-protein
MSDASPILSLPYILPSQAQKHVTHNEALQRLDVLVQPAVLDRDRSAPPAAPAAGARHLVGPGAEGAWAGREEAFAVWDAEAAVWRFLAPQPGWQTFVLAEGAGLVFTAQGWRTLIGLLPEFPSLGIATSADATNRLAVAGPATLFTHAGASHRIKVNKAAEAETASLLFQSDWSGRAEIGLAGSDDFALKVSPDGTSFRTALSADRASGRVALPQGAVVTGSLTGSAVQASAADATPGRLLTVGAFGLGAPAPLVGNAGAVDGALAPGFYGYDSAQGSSGGPAGVQAGLLLHQSRGAGEVQLFLVEAGGGGLMPGILFSRARGEGAWSPWVAGGIVESAGNANGRYIRHQDGTQSCWQKVTTSASADVVAPFPAAFSTATGLVTVSSVVSNGAQALSPRLTGRTTTSVGVSVFSATNTRLAAQVELISMGRWY
>CP030273.1|AXC63819.1|79139_80081_+|calcium-binding-protein
MPEVSPFPSLSPLSAPLAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDMEGEWIDLRGVGAITGFGDLMANHLSEVNGHVVIEVGANRITLEGISSEMLTRDDFLF
>CP030273.1|AXC63820.1|80196_81519_+|hypothetical-protein
MTLLRTTLLTALLSLALGAGAEAAPEAIYGPGPRALDNREIFAAANLPLWQELDRAGVEGIVLNASFLMTTDFRGIGAKGEKRRPDDTYLTDADLGGLAAIVARTGLQVTYEAGVGLSGARCDASLSPEALGRAAAAFEFERNVRRLTDAGIPVSAINVDGPMLRLLPDSDKPAGCRETAGAGFDVRSAGQIVHAYMVELRDRIEAAQEKQTVQVRWLVNLPLWQVGRVPRNPVYSEPTPDAKPTTDLTDAVRSLAKAQAEQELPGRALEIAEVVIGYPYSMGKQNPNRYAIRVRNLWLSSRALNPRSGHPPPLGFIVNTHSYLNPCLKREGRPDVAFLTFRRGKGSVSEACQRAQIGEDTVANAQDGAMDNDADYLRDSFTYADELSPGGELARQLVLRDGTRIADHVAHIYYQSWGVNPLSNAWYMERLIERLEHGDR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	67220-67252	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	60898-60930	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NC_009040	Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence	21550-21582	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	60874-60906	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	104690-104722	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	19476-19508	0	1.0
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	3847-3879	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	75966-76004	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	69648-69686	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	69619-69657	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	113436-113474	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	10724-10762	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	119408-119446	0	1.0
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NC_011960	Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence	63100-63138	1	0.974
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NC_011960	Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence	72598-72630	2	0.939
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	28105-28137	2	0.939
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	NC_009040	Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence	30261-30299	2	0.949
CP030273_2	2.1\|75966\|39\|CP030273\|CRISPRCasFinder	75966-76004	39	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	18781-18819	3	0.923
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	291403-291435	7	0.788
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1573927-1573959	7	0.788
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	558458-558490	7	0.788
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK864266	Gordonia phage Arri, complete genome	8692-8724	9	0.727
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MN284907	Gordonia phage Fireball, complete genome	8624-8656	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK864264	Gordonia phage VanDeWege, complete genome	8812-8844	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MH479910	Gordonia phage Danyall, complete genome	8520-8552	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MT639651	Gordonia phage Portcullis, complete genome	8580-8612	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MH479917	Gordonia phage KimmyK, complete genome	8648-8680	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MH669015	Gordonia phage TillyBobJoe, complete genome	8335-8367	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK814761	Gordonia phage SmokingBunny, complete genome	8499-8531	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	KX557286	Gordonia phage Twister6, complete genome	8431-8463	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK864267	Gordonia phage Valary, complete genome	8884-8916	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK967381	Gordonia phage RogerDodger, complete genome	8884-8916	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MT310872	Gordonia phage Evamon, complete genome	8501-8533	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MT521998	Gordonia phage Jambalaya, complete genome	8332-8364	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK864265	Gordonia phage Barb, complete genome	8648-8680	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	NC_030913	Gordonia phage Wizard, complete genome	8624-8656	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MK305889	Gordonia phage Mutzi, complete genome	8520-8552	10	0.697
CP030273_1	1.1\|67220\|33\|CP030273\|CRISPRCasFinder	67220-67252	33	MN010760	Gordonia phage Nubi, complete genome	8521-8553	10	0.697

1. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

2. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

3. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NC_009040 (Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

4. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

5. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

6. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

7. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
ggggggtcggcagggcggcacggcgggggcaaa	Protospacer
*********************************

8. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

9. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

10. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

11. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

12. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

13. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	Protospacer
***************************************

14. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NC_011960 (Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence) position: , mismatch: 1, identity: 0.974

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctccagttcggccgcgtgctgcgtctt	Protospacer
*************** ***********************

15. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NC_011960 (Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence) position: , mismatch: 2, identity: 0.939

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
cgggggccggcagggcggcacggcgggggcaaa	Protospacer
 *****.**************************

16. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.939

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
cgggggccggcagggcggcacggcgggggcaaa	Protospacer
 *****.**************************

17. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to NC_009040 (Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence) position: , mismatch: 2, identity: 0.949

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
ttccgcatggcgctccagttcggcctcgtgctgcgtctt	Protospacer
*************** ********* *************

18. spacer 2.1|75966|39|CP030273|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.923

ttccgcatggcgctcgagttcggccgcgtgctgcgtctt	CRISPR spacer
tccggcatggcgctcgagttcggccgcctgctgcgtctt	Protospacer
*.* *********************** ***********

19. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.788

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
gccgggtcgccagggcggcaaggcgggcgaaca	Protospacer
*  ****** ********** ****** * * *

20. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.788

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
gccgggtcgccagggcggcaaggcgggcgaaca	Protospacer
*  ****** ********** ****** * * *

21. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.788

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
gccgggtcgccagggcggcaaggcgggcgaaca	Protospacer
*  ****** ********** ****** * * *

22. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK864266 (Gordonia phage Arri, complete genome) position: , mismatch: 9, identity: 0.727

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agatccttggcagggcggtccggcgggggcaac	Protospacer
.*.   *.**********. ************

23. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MN284907 (Gordonia phage Fireball, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

24. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK864264 (Gordonia phage VanDeWege, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

25. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MH479910 (Gordonia phage Danyall, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

26. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MT639651 (Gordonia phage Portcullis, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

27. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MH479917 (Gordonia phage KimmyK, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

28. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MH669015 (Gordonia phage TillyBobJoe, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

29. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK814761 (Gordonia phage SmokingBunny, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

30. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to KX557286 (Gordonia phage Twister6, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

31. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK864267 (Gordonia phage Valary, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

32. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK967381 (Gordonia phage RogerDodger, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

33. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MT310872 (Gordonia phage Evamon, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

34. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MT521998 (Gordonia phage Jambalaya, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

35. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK864265 (Gordonia phage Barb, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

36. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to NC_030913 (Gordonia phage Wizard, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

37. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MK305889 (Gordonia phage Mutzi, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

38. spacer 1.1|67220|33|CP030273|CRISPRCasFinder matches to MN010760 (Gordonia phage Nubi, complete genome) position: , mismatch: 10, identity: 0.697

ggggggtcggcagggcggcacggcgggggcaaa	CRISPR spacer
agactcctggcagggcggtccggcgggggcaac	Protospacer
.*.   ..**********. ************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

56791 : 67181

Enterobacteria_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC63800.1\|56791_57628_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.0e-49	41.1
AXC63801.1\|57829_58555_+	sulfotransferase	NA	NA	NA	NA
AXC63802.1\|58921_59704_+	sulfotransferase	NA	NA	NA	NA
AXC63803.1\|59678_60569_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	7.7e-87	54.9
AXC63804.1\|60565_61417_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.1e-32	38.5
AXC63805.1\|61413_62454_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-91	52.1
AXC63806.1\|62457_63021_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.7e-32	43.5
AXC63807.1\|63084_64023_-	glycosyltransferase	NA	NA	NA	NA
AXC63808.1\|64073_65036_-	RepB family plasmid replication initiator protein	A0A0K1Y6J9	Rhodobacter_phage	1.3e-58	39.1
AXC63809.1\|65339_65672_-	hypothetical protein	NA	NA	NA	NA
AXC63810.1\|65726_67181_+	chromosome partitioning protein	A0A0K2FLP4	Brevibacillus_phage	2.2e-06	26.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP030272

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

371624 : 429099

Vibrio_phage(17.65%)

tail,tRNA,integrase,transposase,protease

attL 371771:371789|attR 398503:398521

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC63209.1\|371624_373001_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
371771:371789	attL	NA	NA	NA	NA
AXC63210.1\|373517_374810_+\|integrase	integrase	NA	NA	NA	NA
AXC63211.1\|374806_375508_-	hypothetical protein	NA	NA	NA	NA
AXC63212.1\|375504_375720_-	hypothetical protein	NA	NA	NA	NA
AXC63213.1\|375716_375926_-	DUF4031 domain-containing protein	A0A0A8IK97	Aurantimonas_phage	7.7e-14	59.1
AXC63214.1\|376082_376352_-	hypothetical protein	A0A1X9HWB1	Ruegeria_phage	6.9e-07	36.7
AXC63215.1\|376348_376576_-	hypothetical protein	NA	NA	NA	NA
AXC63216.1\|376670_377108_+	hypothetical protein	Q8W6P3	Burkholderia_virus	1.6e-13	36.6
AXC63217.1\|377104_377611_+	hypothetical protein	M4SPS7	Rhodobacter_phage	3.3e-10	39.2
AXC63218.1\|377932_378577_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXC63219.1\|378601_381721_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXC63220.1\|381737_382901_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXC63221.1\|382997_384833_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AXC63222.1\|385068_386871_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXC63726.1\|387395_388223_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXC63223.1\|388405_389911_+	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
AXC63224.1\|389924_390398_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
AXC63225.1\|390541_391201_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
AXC63226.1\|391348_392260_-	porin	NA	NA	NA	NA
AXC63227.1\|392500_392674_-	DUF465 domain-containing protein	NA	NA	NA	NA
AXC63228.1\|393159_393888_+	DUF2306 domain-containing protein	NA	NA	NA	NA
AXC63229.1\|394020_394239_-	hypothetical protein	NA	NA	NA	NA
AXC63230.1\|394395_396174_+	SLC13 family permease	NA	NA	NA	NA
AXC63231.1\|396307_396772_-	cupin domain-containing protein	NA	NA	NA	NA
AXC63232.1\|396830_397547_-	LrgB family protein	NA	NA	NA	NA
AXC63233.1\|397539_397893_-	CidA/LrgA family protein	NA	NA	NA	NA
AXC63234.1\|398001_398658_-	HyuE hydantoin racemase	NA	NA	NA	NA
398503:398521	attR	NA	NA	NA	NA
AXC63235.1\|398658_399495_-	ABC transporter permease	NA	NA	NA	NA
AXC63236.1\|399496_400360_-	ABC transporter permease	NA	NA	NA	NA
AXC63237.1\|400592_401858_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXC63238.1\|401883_402861_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-21	32.2
AXC63239.1\|403072_403786_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXC63240.1\|403933_404371_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
AXC63241.1\|404367_405267_-	EamA family transporter RarD	NA	NA	NA	NA
AXC63242.1\|405761_406259_+	bacterioferritin	NA	NA	NA	NA
AXC63243.1\|406938_408045_+	glycosyltransferase	NA	NA	NA	NA
AXC63244.1\|408051_409524_-	GGDEF domain-containing protein	G3MA91	Bacillus_virus	3.7e-09	32.1
AXC63245.1\|409921_411085_+	AI-2E family transporter	NA	NA	NA	NA
AXC63246.1\|411094_413821_-	methionine synthase	NA	NA	NA	NA
AXC63247.1\|413817_414897_-	5-methyltetrahydrofolate--homocysteine methyltransferase	A0A140XBC7	Dickeya_phage	1.3e-14	54.0
AXC63248.1\|415172_416051_+\|protease	viral aspartic protease	NA	NA	NA	NA
AXC63249.1\|416047_417091_+	lipocalin	NA	NA	NA	NA
AXC63250.1\|417443_417677_+	hypothetical protein	NA	NA	NA	NA
AXC63251.1\|418096_418291_+\|tail	phage tail protein	A0A0U4JEJ6	Pseudomonas_phage	8.8e-12	58.2
AXC63252.1\|418571_419069_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	6.8e-24	37.7
AXC63253.1\|419083_419380_+\|tail	phage tail assembly protein	E5E3Q0	Burkholderia_phage	8.4e-14	51.2
AXC63254.1\|419406_419535_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
AXC63255.1\|419544_421872_+\|tail	tail tape measure protein	A0A2I7S9D9	Vibrio_phage	7.0e-55	37.9
AXC63256.1\|421864_422275_+\|tail	phage tail protein	A0A193GYE0	Enterobacter_phage	8.6e-33	50.4
AXC63257.1\|422271_422484_+\|tail	phage tail protein	R9TR63	Vibrio_phage	9.9e-09	47.8
AXC63258.1\|422480_423455_+\|tail	phage tail protein	D4HTW7	Vibrio_phage	1.0e-44	38.6
AXC63259.1\|423598_424426_+	DNA adenine methylase	A0A219VHB5	Ochrobactrum_phage	3.9e-93	62.3
AXC63260.1\|424754_425822_+	restriction endonuclease	A0A1S5SAB0	Streptococcus_phage	3.3e-60	38.8
AXC63261.1\|425989_427006_-	DUF2971 domain-containing protein	NA	NA	NA	NA
AXC63262.1\|427399_427921_+	diacylglyceryl transferase	NA	NA	NA	NA
AXC63263.1\|427948_428770_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	8.9e-21	32.2
AXC63264.1\|428766_429099_+\|tRNA	tRNA-binding protein	NA	NA	NA	NA

DBSCAN-SWA_2

739306 : 746477

Rhizobium_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC63532.1\|739306_740653_+	S49 family peptidase	A0A068CE01	Rhizobium_phage	6.7e-58	47.0
AXC63533.1\|740661_740973_+	hypothetical protein	NA	NA	NA	NA
AXC63534.1\|740969_741389_+	hypothetical protein	NA	NA	NA	NA
AXC63535.1\|741600_742416_+	hypothetical protein	A0A1S5R1J5	Pseudomonas_phage	4.2e-15	29.8
AXC63536.1\|742422_742740_+	hypothetical protein	NA	NA	NA	NA
AXC63537.1\|742743_743070_+	hypothetical protein	NA	NA	NA	NA
AXC63538.1\|743203_743521_+	hypothetical protein	I3UM16	Rhodobacter_phage	2.8e-23	57.9
AXC63539.1\|743573_743795_-	hypothetical protein	NA	NA	NA	NA
AXC63540.1\|743787_744060_-	BrnT family toxin	K4NX81	Burkholderia_phage	2.4e-15	48.2
AXC63541.1\|744287_745094_+	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	5.6e-84	58.6
AXC63542.1\|745148_745958_+	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	7.1e-63	49.1
AXC63543.1\|745970_746477_+	hypothetical protein	F8TVB7	EBPR_siphovirus	3.9e-11	48.2

DBSCAN-SWA_3

885676 : 909343

Acidithiobacillus_phage(18.75%)

terminase,capsid,portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC63654.1\|885676_887008_-	DNA (cytosine-5-)-methyltransferase	A0A191SB20	Nostoc_phage	6.4e-53	36.2
AXC63655.1\|887059_887488_-	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	8.7e-36	50.4
AXC63656.1\|887740_888223_-	hypothetical protein	F8TVB7	EBPR_siphovirus	1.2e-12	51.8
AXC63657.1\|888235_889045_-	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	9.2e-63	49.4
AXC63658.1\|889099_889906_-	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	3.4e-81	57.0
AXC63743.1\|890274_890634_-	hypothetical protein	NA	NA	NA	NA
AXC63659.1\|890888_891206_-	hypothetical protein	I3UM16	Rhodobacter_phage	3.7e-23	57.9
AXC63660.1\|891424_891751_-	hypothetical protein	NA	NA	NA	NA
AXC63661.1\|891754_892072_-	hypothetical protein	NA	NA	NA	NA
AXC63662.1\|892078_893563_-	hypothetical protein	A0A1S5R1J5	Pseudomonas_phage	1.7e-14	30.8
AXC63663.1\|893578_894469_-	hypothetical protein	A0A2H4J8C7	uncultured_Caudovirales_phage	8.1e-28	31.0
AXC63664.1\|894468_899643_-	hypothetical protein	F1C5E9	Cronobacter_phage	2.4e-07	28.5
AXC63744.1\|899898_900243_+	YbjQ family protein	M4STD1	Rhodobacter_phage	5.9e-19	48.1
AXC63665.1\|900205_900568_-	hypothetical protein	NA	NA	NA	NA
AXC63666.1\|900630_901077_-	hypothetical protein	NA	NA	NA	NA
AXC63667.1\|901174_901645_-	hypothetical protein	M4QQ74	Salicola_phage	1.2e-17	38.9
AXC63668.1\|901756_902179_-	hypothetical protein	NA	NA	NA	NA
AXC63669.1\|902175_902502_-	hypothetical protein	NA	NA	NA	NA
AXC63670.1\|902512_903535_-\|capsid	minor capsid protein E	K4I3Z3	Acidithiobacillus_phage	1.1e-105	56.3
AXC63671.1\|903616_904006_-\|head	head decoration protein	K4ICP8	Acidithiobacillus_phage	3.6e-20	45.7
AXC63672.1\|904141_905488_-	S49 family peptidase	A0A068CE01	Rhizobium_phage	8.7e-58	48.2
AXC63673.1\|905484_906975_-\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	1.9e-178	67.4
AXC63674.1\|906974_907184_-	hypothetical protein	NA	NA	NA	NA
AXC63675.1\|907180_909343_-\|terminase	phage terminase large subunit family protein	A0A291AUS9	Sinorhizobium_phage	1.9e-102	35.4

DBSCAN-SWA_4

913991 : 923677

Rhodobacter_phage(44.44%)

integrase

attL 908914:908929|attR 924764:924779

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
908914:908929	attL	NA	NA	NA	NA
AXC63681.1\|913991_914513_-	DUF1937 family protein	I3UM60	Rhodobacter_phage	2.7e-23	42.3
AXC63682.1\|914649_914910_-	hypothetical protein	NA	NA	NA	NA
AXC63683.1\|914906_915248_-	hypothetical protein	A0A1X9HW32	Ruegeria_phage	1.8e-07	41.6
AXC63684.1\|915247_915493_-	hypothetical protein	NA	NA	NA	NA
AXC63747.1\|915551_916238_+	helix-turn-helix domain-containing protein	H6WBQ3	Rhodobacter_phage	1.5e-13	40.0
AXC63685.1\|916496_916598_+	hypothetical protein	NA	NA	NA	NA
AXC63686.1\|916594_916792_+	hypothetical protein	NA	NA	NA	NA
AXC63687.1\|916788_917121_+	hypothetical protein	NA	NA	NA	NA
AXC63688.1\|917123_917243_+	hypothetical protein	NA	NA	NA	NA
AXC63689.1\|917302_917713_+	hypothetical protein	I3UM32	Rhodobacter_phage	3.5e-18	44.0
AXC63690.1\|917731_918718_+	DUF2303 family protein	H6WBP5	Rhodobacter_phage	7.5e-75	46.9
AXC63691.1\|918814_918967_+	hypothetical protein	NA	NA	NA	NA
AXC63748.1\|918968_919163_+	hypothetical protein	NA	NA	NA	NA
AXC63692.1\|919165_919369_+	hypothetical protein	NA	NA	NA	NA
AXC63693.1\|919361_920471_+	phage Gp37/Gp68 family protein	A0A0A8ILD3	Aurantimonas_phage	1.4e-85	50.1
AXC63694.1\|920454_920715_+	hypothetical protein	NA	NA	NA	NA
AXC63695.1\|920701_920956_+	hypothetical protein	NA	NA	NA	NA
AXC63749.1\|920987_921413_+	DUF4326 domain-containing protein	A0A2H4PFT6	Mycobacterium_phage	1.1e-19	37.7
AXC63696.1\|921718_922435_+	hypothetical protein	A0A0U2BXK1	Paracoccus_phage	3.5e-82	64.3
AXC63697.1\|922523_922802_+	DNA-binding protein	NA	NA	NA	NA
AXC63698.1\|922678_923677_+\|integrase	site-specific integrase	A0A068CCA6	Rhizobium_phage	2.5e-09	24.4
924764:924779	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP030271

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

220166 : 245676

Paracoccus_phage(26.67%)

head,capsid,terminase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC60011.1\|220166_221225_-	ImmA/IrrE family metallo-endopeptidase	A0A0U4JD08	Gordonia_phage	1.0e-40	34.9
AXC60012.1\|221246_221891_-	hypothetical protein	NA	NA	NA	NA
AXC60013.1\|222104_222587_-	hypothetical protein	F8TVB7	EBPR_siphovirus	7.1e-10	47.0
AXC60014.1\|222599_223409_-	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	3.8e-64	50.2
AXC60015.1\|223462_224269_-	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	9.8e-81	56.6
AXC60016.1\|224670_225669_+	histidine kinase	NA	NA	NA	NA
AXC60017.1\|225681_226071_+	response regulator	NA	NA	NA	NA
AXC60018.1\|226141_226459_-	hypothetical protein	I3UM16	Rhodobacter_phage	2.1e-23	58.9
AXC60019.1\|226592_226931_-	hypothetical protein	NA	NA	NA	NA
AXC60020.1\|226934_227252_-	hypothetical protein	NA	NA	NA	NA
AXC60021.1\|227258_228743_-	hypothetical protein	A0A0S3UG21	Pseudomonas_phage	3.6e-12	30.2
AXC60022.1\|228759_229650_-	hypothetical protein	NA	NA	NA	NA
AXC60023.1\|229649_234656_-\|tail	tail tape measure protein	A0A0U4JEA4	Pseudomonas_phage	9.5e-49	53.0
AXC62781.1\|234718_234955_-	hypothetical protein	NA	NA	NA	NA
AXC62782.1\|235038_235413_-	hypothetical protein	NA	NA	NA	NA
AXC60024.1\|235415_235856_-	hypothetical protein	A0A2P1N076	Streptomyces_phage	2.5e-06	34.4
AXC60025.1\|235865_236246_-	DUF3168 domain-containing protein	A0A0U2BX31	Paracoccus_phage	2.0e-28	55.6
AXC60026.1\|236249_236417_-	hypothetical protein	NA	NA	NA	NA
AXC60027.1\|236413_236887_-	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	1.1e-26	51.9
AXC60028.1\|236883_237216_-\|head,tail	head-tail adaptor protein	A0A0U2BXJ0	Paracoccus_phage	2.0e-16	44.5
AXC60029.1\|237212_237719_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AXC60030.1\|237723_238014_-	hypothetical protein	NA	NA	NA	NA
AXC60031.1\|238146_239481_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	7.1e-52	37.4
AXC60032.1\|239734_240478_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AXC60033.1\|240488_241448_-	S49 family peptidase	I3ULZ8	Rhodobacter_phage	3.0e-20	36.2
AXC60034.1\|241444_242713_-\|portal	phage portal protein	Q6DMU2	Streptococcus_phage	6.6e-23	25.8
AXC60035.1\|242826_243699_-	multidrug DMT transporter permease	NA	NA	NA	NA
AXC60036.1\|244017_245676_-\|terminase	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	1.7e-79	32.3

DBSCAN-SWA_2

376989 : 386036

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC60176.1\|376989_379212_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	8.3e-114	40.9
AXC60177.1\|379335_379857_-	single-stranded DNA-binding protein	A0A0U2C0X4	Paracoccus_phage	4.6e-47	77.6
AXC62788.1\|380070_380685_+	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	3.8e-24	45.3
AXC60178.1\|380797_382090_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.5e-94	45.8
AXC60179.1\|382196_382754_-	superoxide dismutase family protein	NA	NA	NA	NA
AXC60180.1\|383045_383372_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.3e-19	54.4
AXC60181.1\|383387_385052_+	protein translocase subunit SecD	NA	NA	NA	NA
AXC60182.1\|385061_386036_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.0e-52	42.3

DBSCAN-SWA_3

630642 : 667532

Paracoccus_phage(20.0%)

head,protease,capsid,terminase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC60412.1\|630642_631377_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXC60413.1\|631392_631689_+	hypothetical protein	NA	NA	NA	NA
AXC60414.1\|631695_632373_-	MFS transporter permease	NA	NA	NA	NA
AXC60415.1\|632514_632712_+	RNA polymerase subunit sigma	NA	NA	NA	NA
AXC60416.1\|632806_633460_+	hypothetical protein	NA	NA	NA	NA
AXC60417.1\|633928_634381_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXC60418.1\|634619_635372_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXC60419.1\|635730_636585_+	hypothetical protein	NA	NA	NA	NA
AXC60420.1\|637624_639058_+	hypothetical protein	NA	NA	NA	NA
AXC60421.1\|639104_639398_+	hypothetical protein	NA	NA	NA	NA
AXC60422.1\|641169_642381_+	hypothetical protein	NA	NA	NA	NA
AXC60423.1\|642377_644183_+	hypothetical protein	NA	NA	NA	NA
AXC60424.1\|644175_644694_+	hypothetical protein	NA	NA	NA	NA
AXC60425.1\|644848_645346_-	hypothetical protein	F8TVB7	EBPR_siphovirus	5.6e-10	47.0
AXC60426.1\|645358_646168_-	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	4.9e-64	50.0
AXC60427.1\|646222_647029_-	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	1.6e-83	57.8
AXC60428.1\|647332_648238_+	DMT family transporter	NA	NA	NA	NA
AXC60429.1\|648308_648626_-	hypothetical protein	I3UM16	Rhodobacter_phage	2.1e-23	58.9
AXC60430.1\|648762_649101_-	hypothetical protein	NA	NA	NA	NA
AXC60431.1\|649104_649422_-	hypothetical protein	NA	NA	NA	NA
AXC60432.1\|649428_650913_-	hypothetical protein	G8DH61	Emiliania_huxleyi_virus	1.6e-12	32.5
AXC60433.1\|651819_656841_-\|tail	tail tape measure protein	A0A0U4JEA4	Pseudomonas_phage	3.1e-47	52.5
AXC60434.1\|656964_657210_-	hypothetical protein	NA	NA	NA	NA
AXC60435.1\|657284_657671_-	hypothetical protein	NA	NA	NA	NA
AXC60436.1\|657667_658111_-	hypothetical protein	A0A2P1N076	Streptomyces_phage	1.8e-07	33.3
AXC60437.1\|658120_658501_-	DUF3168 domain-containing protein	A0A0U2BX31	Paracoccus_phage	3.8e-27	53.2
AXC60438.1\|658504_659062_-	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	2.9e-15	37.3
AXC60439.1\|659061_659394_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AXC60440.1\|659390_659732_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AXC60441.1\|659728_660163_-	hypothetical protein	NA	NA	NA	NA
AXC60442.1\|660233_661535_-\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	1.3e-79	43.1
AXC60443.1\|661547_662387_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.4e-69	58.1
AXC60444.1\|662383_663634_-\|portal	phage portal protein	M4QP41	Tetraselmis_viridis_virus	5.8e-80	40.3
AXC60445.1\|663633_665343_-\|terminase	terminase large subunit	A0A2H4J559	uncultured_Caudovirales_phage	6.2e-133	41.9
AXC60446.1\|665344_665821_-	hypothetical protein	NA	NA	NA	NA
AXC60447.1\|665863_666763_-	HNH nuclease	I3ULZ4	Rhodobacter_phage	3.9e-30	56.1
AXC60448.1\|666869_667532_-	hypothetical protein	G8DGC1	Emiliania_huxleyi_virus	4.2e-37	40.6

DBSCAN-SWA_4

978156 : 987245

Azospirillum_phage(40.0%)

head,capsid,terminase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC60729.1\|978156_979767_-\|terminase	terminase large subunit	B0VK29	Azospirillum_phage	2.1e-37	27.0
AXC60730.1\|979766_980162_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
AXC60731.1\|980158_980473_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AXC60732.1\|980475_980892_-	DUF3168 domain-containing protein	NA	NA	NA	NA
AXC60733.1\|980884_981307_-	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	6.8e-09	40.5
AXC60734.1\|981290_981602_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AXC62812.1\|981820_983269_+	hypothetical protein	NA	NA	NA	NA
AXC60735.1\|983253_983604_-	HNH endonuclease	Q38456	Bacillus_phage	5.5e-20	48.9
AXC60736.1\|983606_984203_-	hypothetical protein	NA	NA	NA	NA
AXC60737.1\|984202_985738_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	5.0e-41	36.0
AXC60738.1\|985734_986055_-	gene transfer agent family protein	NA	NA	NA	NA
AXC60739.1\|986051_987245_-\|portal	phage portal protein	M1PLL1	Streptococcus_phage	1.5e-40	31.5

DBSCAN-SWA_5

1108187 : 1120317

Paracoccus_phage(50.0%)

head,protease,capsid,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC62817.1\|1108187_1109363_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	1.5e-58	38.3
AXC60843.1\|1109364_1109598_+	hypothetical protein	NA	NA	NA	NA
AXC60844.1\|1109602_1110166_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.4e-30	49.3
AXC60845.1\|1110231_1111428_+\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	3.6e-63	42.2
AXC60846.1\|1111522_1112122_+	hypothetical protein	NA	NA	NA	NA
AXC60847.1\|1112121_1112457_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AXC60848.1\|1112453_1112852_+	DUF3168 domain-containing protein	NA	NA	NA	NA
AXC60849.1\|1112889_1113303_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AXC60850.1\|1113302_1113821_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
AXC60851.1\|1113813_1114464_+\|tail	phage tail tape measure protein	D6PFD6	uncultured_phage	3.3e-10	28.1
AXC60852.1\|1114473_1115106_+	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	6.1e-62	51.9
AXC60853.1\|1115105_1115990_+	DUF2163 domain-containing protein	A0A0B5A5B8	Paracoccus_phage	7.2e-61	43.6
AXC62818.1\|1115986_1116427_+	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	1.5e-27	47.1
AXC60854.1\|1116426_1120317_+	host specificity protein	A0A0B5A7K5	Paracoccus_phage	2.3e-220	37.6

DBSCAN-SWA_6

1655985 : 1696265

Paracoccus_phage(33.33%)

tRNA,head,protease,capsid,terminase,portal,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC61342.1\|1655985_1657026_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
AXC61343.1\|1657111_1660396_-	hypothetical protein	NA	NA	NA	NA
AXC61344.1\|1660486_1660948_+	peroxiredoxin	NA	NA	NA	NA
AXC61345.1\|1661358_1662702_+	M23 family peptidase	A8ATH6	Listeria_phage	1.5e-20	46.7
AXC61346.1\|1662691_1663210_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA
AXC61347.1\|1663405_1664182_-	DUF2189 domain-containing protein	NA	NA	NA	NA
AXC61348.1\|1664551_1665679_-	peptide chain release factor 2	NA	NA	NA	NA
AXC61349.1\|1665787_1668337_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
AXC61350.1\|1668428_1669664_-	N-acetylmuramoyl-L-alanine amidase	C8CHK8	Thermus_virus	4.8e-10	37.9
AXC61351.1\|1669712_1670864_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AXC61352.1\|1671031_1671775_+	DsbA family protein	NA	NA	NA	NA
AXC61353.1\|1672110_1673244_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA
AXC61354.1\|1673374_1674589_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXC61355.1\|1674699_1675923_-	5-aminolevulinate synthase 1	V5LQ39	Emiliania_huxleyi_virus	3.6e-34	29.1
AXC61356.1\|1676057_1676627_-	5-aminolevulic acid synthase	NA	NA	NA	NA
AXC61357.1\|1676856_1678230_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
AXC61358.1\|1678226_1678670_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXC61359.1\|1680085_1680418_+	hypothetical protein	NA	NA	NA	NA
AXC62835.1\|1680450_1684068_-	hypothetical protein	A0A0U2C146	Paracoccus_phage	1.3e-103	37.0
AXC61360.1\|1684067_1684493_-	hypothetical protein	S4TR39	Salmonella_phage	1.3e-10	31.4
AXC61361.1\|1684542_1685217_-	hypothetical protein	A0A0U2C133	Paracoccus_phage	7.1e-16	32.6
AXC61362.1\|1685225_1685870_-	hypothetical protein	NA	NA	NA	NA
AXC61363.1\|1685873_1688195_-	hypothetical protein	A0A2H4PI09	Pseudomonas_phage	8.6e-21	29.6
AXC61364.1\|1688255_1688525_-	hypothetical protein	NA	NA	NA	NA
AXC61365.1\|1688599_1688932_-	hypothetical protein	NA	NA	NA	NA
AXC61366.1\|1689058_1689544_-	HNH endonuclease	Q6XQ94	Escherichia_phage	4.2e-18	39.5
AXC61367.1\|1689709_1690129_-	hypothetical protein	NA	NA	NA	NA
AXC61368.1\|1690192_1690561_-	hypothetical protein	NA	NA	NA	NA
AXC61369.1\|1690566_1691031_-	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	4.1e-15	34.0
AXC61370.1\|1691031_1691349_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AXC61371.1\|1691350_1691692_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
AXC61372.1\|1691715_1692825_-\|capsid	phage major capsid protein	NA	NA	NA	NA
AXC61373.1\|1692897_1693422_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	3.0e-30	50.6
AXC61374.1\|1693418_1694645_-\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	7.5e-32	30.8
AXC61375.1\|1694684_1696265_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	8.5e-145	53.3

DBSCAN-SWA_7

1909217 : 1927057

Bacillus_phage(50.0%)

tRNA,head,protease,capsid,terminase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXC61578.1\|1909217_1909862_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXC61579.1\|1909810_1910182_-	DUF2155 domain-containing protein	NA	NA	NA	NA
AXC61580.1\|1910178_1910649_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA
AXC61581.1\|1910648_1911023_-	NADH:ubiquinone oxidoreductase subunit NDUFA12	NA	NA	NA	NA
AXC61582.1\|1911147_1912413_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	2.0e-133	58.4
AXC61583.1\|1912537_1913170_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	5.2e-61	61.0
AXC61584.1\|1913336_1913945_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
AXC61585.1\|1914059_1915265_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXC61586.1\|1915261_1916950_+	ABC transporter permease subunit	NA	NA	NA	NA
AXC61587.1\|1916946_1917591_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
AXC61588.1\|1917723_1918194_+	CAP domain-containing protein	A0A0E3T7R5	Bacillus_phage	4.3e-12	34.4
AXC61589.1\|1918270_1919590_-	HAMP domain-containing protein	NA	NA	NA	NA
AXC61590.1\|1919630_1920542_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXC61591.1\|1920846_1921125_+	hypothetical protein	NA	NA	NA	NA
AXC61592.1\|1921137_1921644_-	hypothetical protein	NA	NA	NA	NA
AXC61593.1\|1921679_1922186_-	hypothetical protein	NA	NA	NA	NA
AXC61594.1\|1922187_1923249_-\|portal	phage portal protein	NA	NA	NA	NA
AXC61595.1\|1923250_1923805_-\|head,protease	HK97 family phage prohead protease	NA	NA	NA	NA
AXC61596.1\|1923804_1925067_-\|capsid	phage major capsid protein	NA	NA	NA	NA
AXC61597.1\|1925051_1925393_-	HNH endonuclease	A0A0S2GLI5	Bacillus_phage	3.7e-05	32.5
AXC61598.1\|1925383_1927057_-\|terminase	terminase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030273

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP030272

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP030271

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection