CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP030209	Salmonella enterica strain SA20044414 chromosome, complete genome	3 crisprs	PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,RT	1	36	4	0
CP030210	Salmonella enterica strain SA20044414 plasmid pSA20044414.1, complete sequence	0 crisprs	csa3,DEDDh	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP030209_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030209_2

635678-635968

Orphan

Consensus_repeat	Method
TTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA	PILER-CR

2 spacers

The CRISPR arrays of CP030209_2

>merge|CP030209|2|635678-635968|PILER-CR
TTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCGAAAGAAAGCGGCTTATCGGTCAGTATCATCTCTTCATAAAACCCGTCAGTGTAAGCTGGCGGGTTTTTGCTTTTACCGGGCGGCAGGATGAATGGCTGTCCACGACGCTATACCCAAAAGAACCCGGCTTATCGGTCAGTTTCACCTCTTCATAAAACCCGTCAGTGTAAGCTGGCGGGGTTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA

>CP030209|2|1|635678-635968|PILER-CR
TTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCGAAAGAAA	GCGGCTTATCGGTCAGTATCATCTCTTCATAAAACCCGTCAGTGTAAGCTGGCGGGT
TTTTGCTTTTACCGGGCGGCAGGATGAATGGCTGTCCACGACGCTATACCCAAAAGAAC	CCGGCTTATCGGTCAGTTTCACCTCTTCATAAAACCCGTCAGTGTAAGCTGGCGGGG
TTTTGCTTTTACAGGGCGGCAGGATGAATGACTGTCCACGACGCTATACCCAAAAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP030209.1\|AXD51226.1\|634088_635234_+\|glycerate-2-kinase	unknown	unknown	gnl\|CDD\|182392
CP030209.1\|AXD51224.1\|632304_633075_+\|5-keto-4-deoxy-D-glucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
CP030209.1\|AXD51236.1\|648401_649103_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
CP030209.1\|AXD51219.1\|624442_625486_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|182371
CP030209.1\|AXD51225.1\|633100_633991_+\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
CP030209.1\|AXD51227.1\|636704_637643_+\|transcriptional-regulator-TdcA	unknown	unknown	gnl\|CDD\|182391
CP030209.1\|AXD51235.1\|648213_648378_-\|hypothetical-protein	unknown	unknown	unknown
CP030209.1\|AXD51233.1\|645433_646765_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273283
CP030209.1\|AXD51231.1\|641390_643685_+\|formate-C-acetyltransferase	unknown	unknown	gnl\|CDD\|153087
CP030209.1\|AXD51234.1\|646790_648101_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
CP030209.1\|AXD51232.1\|643754_645119_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|185000
CP030209.1\|AXD51228.1\|637740_638730_+\|serine/threonine-dehydratase	unknown	unknown	gnl\|CDD\|236317
CP030209.1\|AXD51223.1\|630203_631775_-\|galactarate-dehydratase	unknown	unknown	gnl\|CDD\|274491
CP030209.1\|AXD51221.1\|626906_627191_-\|PTS-galactitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|182372
CP030209.1\|AXD51222.1\|627221_627686_-\|PTS-galactitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|182023
CP030209.1\|AXD51220.1\|625529_626903_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
CP030209.1\|AXD51230.1\|640148_641357_+\|propionate-kinase	unknown	unknown	gnl\|CDD\|183484
CP030209.1\|AXD55098.1\|629091_629946_-\|tagatose-bisphosphate-family-class-II-aldolase	unknown	unknown	gnl\|CDD\|181690
CP030209.1\|AXD51229.1\|638750_640082_+\|threonine/serine-transporter-TdcC	unknown	unknown	gnl\|CDD\|184191
CP030209.1\|AXD55097.1\|627700_628972_-\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|237889

Protein	Function_ID	Function_description	E-value
CP030209.1\|AXD51226.1\|634088_635234_+\|glycerate-2-kinase	gnl\|CDD\|182392	PRK10342, PRK10342, glycerate kinase I; Provisional.	0
CP030209.1\|AXD51224.1\|632304_633075_+\|5-keto-4-deoxy-D-glucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
CP030209.1\|AXD51219.1\|624442_625486_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|182371	PRK10309, PRK10309, galactitol-1-phosphate 5-dehydrogenase.	0
CP030209.1\|AXD51225.1\|633100_633991_+\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0
CP030209.1\|AXD51227.1\|636704_637643_+\|transcriptional-regulator-TdcA	gnl\|CDD\|182391	PRK10341, PRK10341, transcriptional regulator TdcA.	0
CP030209.1\|AXD51236.1\|648401_649103_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.87451e-68
CP030209.1\|AXD51233.1\|645433_646765_+\|hypothetical-protein	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.37807e-164
CP030209.1\|AXD51231.1\|641390_643685_+\|formate-C-acetyltransferase	gnl\|CDD\|153087	cd01678, PFL1, Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.	0
CP030209.1\|AXD51234.1\|646790_648101_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	0
CP030209.1\|AXD51232.1\|643754_645119_+\|L-serine-ammonia-lyase	gnl\|CDD\|185000	PRK15040, PRK15040, L-serine ammonia-lyase.	0
CP030209.1\|AXD51228.1\|637740_638730_+\|serine/threonine-dehydratase	gnl\|CDD\|236317	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB.	0
CP030209.1\|AXD51223.1\|630203_631775_-\|galactarate-dehydratase	gnl\|CDD\|274491	TIGR03248, galactar-dH20, galactarate dehydratase. Galactarate dehydratase converts D-galactarate to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0714).	0
CP030209.1\|AXD51221.1\|626906_627191_-\|PTS-galactitol-transporter-subunit-IIB	gnl\|CDD\|182372	PRK10310, PRK10310, PTS galactitol transporter subunit IIB.	4.56919e-60
CP030209.1\|AXD51222.1\|627221_627686_-\|PTS-galactitol-transporter-subunit-IIA	gnl\|CDD\|182023	PRK09665, PRK09665, PTS galactitol transporter subunit IIA.	8.14372e-98
CP030209.1\|AXD51220.1\|625529_626903_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	0
CP030209.1\|AXD51230.1\|640148_641357_+\|propionate-kinase	gnl\|CDD\|183484	PRK12379, PRK12379, propionate kinase.	0
CP030209.1\|AXD55098.1\|629091_629946_-\|tagatose-bisphosphate-family-class-II-aldolase	gnl\|CDD\|181690	PRK09195, gatY, tagatose-bisphosphate aldolase; Reviewed.	0
CP030209.1\|AXD51229.1\|638750_640082_+\|threonine/serine-transporter-TdcC	gnl\|CDD\|184191	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional.	0
CP030209.1\|AXD55097.1\|627700_628972_-\|tagatose-bisphosphate-aldolase	gnl\|CDD\|237889	PRK15052, PRK15052, tagatose-bisphosphate aldolase subunit GatZ.	0

>CP030209.1|AXD51226.1|634088_635234_+|glycerate-2-kinase
MKIVIAPDSYKESLSAAEVAQAIEKGFREIFPDAQYVSVPVADGGEGTVEAMIAATQGVERTAWVTGPLGEKVKACWGMSGDGKTAFIEMAAASGLALVPPEKRNPLITTSRGTGELILQALESGASNIIIGIGGSATNDGGAGMMQALGAKLRDANGADIGYGGGSLHCLSDIDISELDPRLKLCAIRVACDVSNPLIGDNGASRIFGPQKGATEENIVELDRNLAHYADIIKKSLNVDVKAAPGAGAAGGMGAALMAFLGAELRSGIEIVTAALNLEEHIHDCTLVVTGEGRIDSQSIRGKVPIGVANVAKKYHKPVIGIAGSLTHDVGIVHHYGIDAVFSVLTRIVTLEEAFRGAFDNIYRASRNVAAALAIGMRSAG
>CP030209.1|AXD51225.1|633100_633991_+|2-hydroxy-3-oxopropionate-reductase
MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKVEVTR
>CP030209.1|AXD51224.1|632304_633075_+|5-keto-4-deoxy-D-glucarate-aldolase
MNNAIFPNKFKAALAAQQVQIGCWSALASPITTEVLGLAGFDWLVLDGEHAPNDVTTLIPQLMALKGSASAPVVRVPTNEPVIIKRMLDIGFYNFLIPFVETQEEAARAVASTRYPPEGIRGVSVSHRANMFGTVPDYFAQSNKNITIIVQIESQLGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQQTIQHIFARAKAHGKPCGILAPVEADARRYLEWGATFVAVGSDLGAFRASTQKLADTFKK
>CP030209.1|AXD51223.1|630203_631775_-|galactarate-dehydratase
MANIEIRQESPSAFYIKVHETDNVAIIVNDHGLKAGTRFPDGLELTEHIPQGHKVALTDIPAHGEIIRYGEVIGYAVRDIPRGSWIDESLVELPKAPPLNTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKVIERDLLPKYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLEGTEDVPAIAVESASIVRLQDEQHVGFKSMVDDILRVAERHLTKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEAVGKRLLDEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEETIEDVGWKLFHFILDVASGRKKTFSDQWGLHNQLAIFNPAPVT
>CP030209.1|AXD55098.1|629091_629946_-|tagatose-bisphosphate-family-class-II-aldolase
MFIISGRTMLKKAQQEGYAVPAFNIHNLETLQVVVETAAELRSPLIVAGTPGTFSYAGVGNIVAIAAELAKSWNHPLAVHLDHHEKLADIKMKVAAGVRSVMIDGSHFPFADNIALVKSVVDYCHRYDVSVEAELGRLGGQEDDLIVDGKDALYTHPEQAREFVEKTGIDSLAIAIGTAHGLYTAEPKLDFERLTDIRQRVDVPLVLHGASGLPTRDITRAISLGICKVNVATELKIAFSGALKNYLTQHAEASDPRHYMIPAKAAMKEVVRKVIADCGCEGKL
>CP030209.1|AXD55097.1|627700_628972_-|tagatose-bisphosphate-aldolase
MKEIISRHKAGEQIGICSVCSAHPLVIESALRFDLNSGNKVLIEATSNQVNQFGGYTGMKPADFRDFVYGIAQEVGFPRERLILGGDHLGPNCWQNEPADTAMEKSVELIKAYVAAGFSKIHLDASMSCADDPTPLDPMVVAKRAALLCQAAETTATDEQKRHLTYVIGTEVPVPGGEASAINAVHVTREQDAARTLQTHQAAFRALGLDEALNRVIAIVVQPGVEFDHTQIIHYQPQAAQALSDWIKETPMVYEAHSTDYQTRQAYRALVRDHYAILKVGPALTFALREAIFALAQMENELISPEQRSRVLEVIDEVMLNEPGYWKKYYRPTWSQAMVDIHFSLSDRIRYYWPHPRIRQSVEKLIANLNNVTLPLGLISQFMPVQFERLSEGVLTPTPHNLIIDKIQDILRAYRFGCTPDVA
>CP030209.1|AXD51222.1|627221_627686_-|PTS-galactitol-transporter-subunit-IIA
MSQLFVRTGITFDSSQQALAHIGKEMLAKGVVHDSYPQALVEREASFPTGIALERHAVAIPHCEAVHAKSPAIYLIRPDKPVMFQQADDDEEIAVSLIIALIVENPAAQLKLLRRLFSELQNPSTLDALLSAPDAELAIRFQETILEPEQCVQV
>CP030209.1|AXD51221.1|626906_627191_-|PTS-galactitol-transporter-subunit-IIB
MKRKVIVACGGAVATSTMAAEEIKELCDANHIELDLVQCRVTEIETYMDGADLICTTARVDRAFGDIPVVHGMPFVSGVGIEALQQKILSILMG
>CP030209.1|AXD51220.1|625529_626903_-|PTS-galactitol-transporter-subunit-IIC
MFSEIMRYILDLGPTVMLPLVIIVFSKLLGMKLGDCFKSGLHIGIGFVGIGLVIGLMLDSIGPAAKAMAEHFQINLHVIDVGWPGSSPMTWASQIALVAIPVAIGVNVLMLVTRMTRVVNVDIWNIWHMTFTGAMLHLATGSYWLGILGVVVHAAFVYKLGDWFAKDTRDYFGLEGIAIPHGSSAYLGPVAVLVDTIIEKIPGLNRIHFSADDVQKRFGPFGEPVTVGFVMGLVIGVLAGYDAKAVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAKHARKRLQAKFGGQEFLIGLDPALLLGHTSVVSASLIFIPLTILIAVLVPGNQVLPFGDLATIGFFIAMAVAVHQGNLFRTLISGVIIMGITLWIATQTIGLHTQLAANAGALKAGGQVASLDQGGSPITWLLIQLFTWQNIVGFAVIAIIYLAGVLLTWRRARQFVAAEKATALQQSQIAS
>CP030209.1|AXD51219.1|624442_625486_-|galactitol-1-phosphate-5-dehydrogenase
MKSVVIHAEGDVRVEERPLPQLQAEDDVLVKVVSSGLCGSDIPRIFAQGAHYYPITLGHEFSGYVESYGTGVTDMQPGDAVACVPLLPCFHCPQCERGYFSLCKQYQFVGSRSEGGNAEYVVVKRANLFRLPSDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIVGAGTIGLLALQCARELGARSVTAIDINPQKLELAKALGATHTCNSREMTADDIQTTLSDIQFDQLVLETAGTPQTVSLAIDIAGPRAQLALVGTLHHDLTLTTRTFGLILRKELTLLGSWMNYSAPWPGEEWETAARLLAEKRLQLAPLIAHRGDAESFAEAVKALNGAPMQGKILLQLS
>CP030209.1|AXD51227.1|636704_637643_+|transcriptional-regulator-TdcA
MNTLVLPKTQHLVVFQEVIRSGSIGSAAKSLGLTQPAVSKIISDVEAYFGVELIVRKNTGVTLTEAGQVLLSWSESITREMKNMINEMNSMTCNTVVDVSFGFPSLIGFTFMSDMIHKFKEVFPKAQVSMYEAQLSSFLPALRDGRLDFAIGTLSNEMQLQDLHVEPLFESEFVLVASKSRTCTGTITLESLKDEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTTPFGSNQFITIPIKDTLPVARYAAVWSKNYRIKKAASVLVELAKQYSSYNGCRRRQLIEIE
>CP030209.1|AXD51228.1|637740_638730_+|serine/threonine-dehydratase
MHITYDLPVAIEDILEAKKRLAGKIYKTGMPRSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVETEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAENVHGMAASYYAGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQRNKVITEGAGALACAALLSGKLDSHIQNRKTVSIISGGNIDLSRVSQITGLVDA
>CP030209.1|AXD51229.1|638750_640082_+|threonine/serine-transporter-TdcC
MSTTDSIVSSQAKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLQMPALNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLSNIALTGHDGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYEKEFGREFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPQNMADAKAQNIPVLSYLANHFASLSGTKSTFATVLEYGASIIALVAIFKSFFGHYLGTLEGLNGLVLKFGYKGDKTKVSMGKLNTISMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTLIGLLTILNIVYKLF
>CP030209.1|AXD51230.1|640148_641357_+|propionate-kinase
MNEFPVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSINGDKPINLAHSNYEDALKAIAFELEKRDLTDSVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAVRQVAVFDTSFHQTLAPEAYLYGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKNSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTRSGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRLDGILFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIHLGNVKAPVEFA
>CP030209.1|AXD51231.1|641390_643685_+|formate-C-acetyltransferase
MKVNIDTSDMLYAEAWRDFKGTDWKEEINVRDFIQHNYTPYEGDESFLADATPATTALWEKVMAGIRIENATHAPVDFDTNIATTITAHDAGYIEKELEKIVGLQTDKPLKRALHPFGGVNMIKSSFHAYGREMDADFEYTFTDLRKTHNQGVFDVYSPDMLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGIRYLVRERELQFADLQSNLEQGQNLEATIRLREELAEHRRALLQMQEMAAKYGYDISRPARNAQEAVQWLYFAYLAAVKSQNGGAMSLGRTASFLDIYIERDFNAGLLTEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSGDPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEALPVAFKKYAAQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYAINGGVDEKLKIQVGPKTAPLTDEVLDYDTVMESLDHFMDWLAVQYISALNIIHYMHDKYSYEASLMALHDRDVYRTMACGIAGLSVAADSLSAIRYAQVKPIRDENGLAIDFAIEGEYPQYGNNDERVDSIACDLVKRFMQKISVLPTYRNAVPTQSILTITSNVVYGQKTGNTPDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKEDAVRKTNLVGLLDGYFHHEAQVEGGQHLNVNVMNREMLLDAIEHPENYPNLTIRVSGYAVRFNALTREQQQDVISRTFTQAM
>CP030209.1|AXD51232.1|643754_645119_+|L-serine-ammonia-lyase
MISAFDIFKIGIGPSSSHTVGPMNAGKCFIDRLIGSGDLPRTTRITVDLYGSLSLTGKGHATDTAIIMGLAGNTPQDVNIDSIPAFIQEVARSSRLSVAGGAHVVDFPVADSILFHAETLARHENGMRITAWHGQTPLLHKTYYSIGGGFIVEEERFGQSHDVEKSVPYDFHSASELLTLCERQGLSVSGLMMQNELALRSKEQIDAGFARIWQVMATGIERGMNTEGVLPGPLNVPRRAVALRRLLVSSDNLSRDPMNVIDWINMFALAVSEENAAGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNANSIARYLLSAGAIGMLYKMNASISGAEVGCQGEVGVACSMAAAGLTELLGGSPAQVCIAAEIAMEHNLGLTCDPVAGQVQIPCIERNAINAVKAVNAARMALRRTSEPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIKVVCG
>CP030209.1|AXD51233.1|645433_646765_+|hypothetical-protein
MESASNTSVILDASAPARRAGMTESEWREAIKFDSTDTGWVIMSIGMAIGAGIVFLPVQVGLMGLWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPSVISGYLGKNWGILLGALYFVMLVIWMFVYSTAITNDSASYLHTFGVTEGLLSDSPFYGLVLICILVAISSRGEKLLFKISTGMVLTKLLVVAALGVSMVGMWHLYNIGALPPMALLIKNAIITLPFTLTSILFIQTLSPMVISYRSREKSIEVARHKALRAMNIAFGVLFVTVFFYAVSFTLAMGHDEAVKAYEQNISALAIAAQFISGDGAGWVKVVSVILNIFAVMTAFFGVYLGFREATQGIVMNILRRKMPAEKIKENLVQRGIMIFAILLAWSAIVLNAPVLSFTSICSPIFGMVGCLIPAWLVYKVPALHKYKGASLYLIIITGLLLCVSPFLAFS
>CP030209.1|AXD51234.1|646790_648101_+|serine-dehydratase-subunit-alpha-family-protein
MFESKINPLWQSFILAVQEEVKPALGCTEPISLALAAAAAAAELDGTVERIDAWVSPNLMKNGMGVTVPGTGMVGLPIAAALGALGGDAKAGLEVLKDASAKAVADAKAMLAAGHVAVMLQEPCNDILFSRAKVYSGDSWACVTIVGDHTNIVRIETDKGVVFTQADNAQGEEKTSPLEVLSHTSLEEILAFVNAVPFDAIRFILDAARLNGALSQEGLRGSWGLHIGSTLAKQCDRGLLAKDLSTAILIRTSAASDARMGGATLPAMSNSGSGNQGITATVPVMVVAEHVGADDERLARALMLSHLSAIYIHHQLPRLSALCAATTAAMGAAAGMAWLIDGRYDTIAMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDTAVTGNEGIVAHNVEQSIANLCSLACRSMQQTDKQIIEIMASKAH
>CP030209.1|AXD51235.1|648213_648378_-|hypothetical-protein
MSKKSAKKRQPVVKPAVQEAMSATVPLGYEEMLTELEAIVADAEARLAEEEAAA
>CP030209.1|AXD51236.1|648401_649103_-|pirin-family-protein
MITTRTAKQCGQADYGWLQARYTFSFGHYFDPTLLGYASLRVLNQEVLAPGASFQPRTYPKVDILNLILDGEAEYRDSDGNHVQAKAGEALLLAAQPGISYSEHNLSKVKPLTRMQLWLDACPERENALVQKIPLLAAQQQLLASPDGEQNSLQLRQQVWVHHITLEKGESLNFQLHGPRAYLQSIHGTFHALTHNEEREALTCGDGAFIRDEPNITLVADTPLRALLVDLPV

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Crispr_ID: CP030209_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030209_3

990383-991756

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

22 spacers

cas3,cas8e,cse2gr11

The CRISPR arrays of CP030209_3

>merge|CP030209|3|990383-991756|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAATTTTCGGGAACGGCGACGGAATCCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATCATCATGGCCAGCGCTGGCGCGCTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATGATTATATCGATCGACCAATCGATGAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGTGAGACAAATCATTCCAGATTGATCAACGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTTAAACAGTAATTTAAAATTGTTAGCGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACGGCGGCGCGGCATTCTGCGGTGCAAATAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTCCAGCGCGCCAAAATCAGGAGATTCCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCCGGCATTCGGCTATGCCTATTCATATGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGTCACTACCGTCTATCTCTTCCGGATACACGTGTTCCCCGCGCCAGCGGGGATAAACCGAACCCGGCAGCAGGGGTAATTCATACAGCATAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTGGTGAAGGGCGCATTTGAGGACCCGTTAGTGTTCCCCGCGTCAGCGGGGATAAACCGCTTGCAGCCGAATACGGTATAGAGTGGGACGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCTGTCCTGCGTCAGCGTTACCAGCTTCATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATTCAATTACGACTCGCTGCCTGACGGGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTGAGCGGACGGGAGCTGGCCGAATGACCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTTTTTACTTTTGCTGCATTCCGCCTCCCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCTGGCAGGAATACAAACTTGTGATGCTGCGGTGTTCCCCGCGCTAGCGGGGATAAACCGACCGCAGGCGCAGCGGCAATATTCTGGTTCAAGTGTTCCCCGCGCTAGCGGGGATAAACCGTCGTTTCTGGGAGCGGGTCTTTCCAGTATTGCGTGTTCCCCGCCCCAGCGGGGATAAACCGCAGGGGAAGAGGTTCCGGCCCAGCAGTTCTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGCTGGGTCGTGTTTGACTCAACGCTCCCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTAGAATTACGCATTGAGCCGATGATGTAGTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP030209|3|2|990383-991695|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAATTTTCGGGAACGGCGACGGAATCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCATCATGGCCAGCGCTGGCGCGCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGATTATATCGATCGACCAATCGATGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGTGAGACAAATCATTCCAGATTGATCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAAACAGTAATTTAAAATTGTTAGCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACGGCGGCGCGGCATTCTGCGGTGCAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTCCAGCGCGCCAAAATCAGGAGATTCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCCGGCATTCGGCTATGCCTATTCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCACTACCGTCTATCTCTTCCGGATACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCCGGCAGCAGGGGTAATTCATACAGCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTGGTGAAGGGCGCATTTGAGGACCCGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTTGCAGCCGAATACGGTATAGAGTGGGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGTCCTGCGTCAGCGTTACCAGCTTCATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATTCAATTACGACTCGCTGCCTGACGGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTGAGCGGACGGGAGCTGGCCGAATGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTTTTTACTTTTGCTGCATTCCGCCTCCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCTGGCAGGAATACAAACTTGTGATGCTGCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACCGCAGGCGCAGCGGCAATATTCTGGTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCGTTTCTGGGAGCGGGTCTTTCCAGTATTGC
GTGTTCCCCGCCCCAGCGGGGATAAACCG	CAGGGGAAGAGGTTCCGGCCCAGCAGTTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGGTCGTGTTTGACTCAACGCTCCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP030209|3|2|990383-991756|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAATTTTCGGGAACGGCGACGGAATCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCATCATGGCCAGCGCTGGCGCGCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGATTATATCGATCGACCAATCGATGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGTGAGACAAATCATTCCAGATTGATCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAAACAGTAATTTAAAATTGTTAGCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACGGCGGCGCGGCATTCTGCGGTGCAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTCCAGCGCGCCAAAATCAGGAGATTCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCCGGCATTCGGCTATGCCTATTCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCACTACCGTCTATCTCTTCCGGATACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCCGGCAGCAGGGGTAATTCATACAGCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTGGTGAAGGGCGCATTTGAGGACCCGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTTGCAGCCGAATACGGTATAGAGTGGGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGTCCTGCGTCAGCGTTACCAGCTTCATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATTCAATTACGACTCGCTGCCTGACGGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTGAGCGGACGGGAGCTGGCCGAATGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTTTTTACTTTTGCTGCATTCCGCCTCCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCTGGCAGGAATACAAACTTGTGATGCTGCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACCGCAGGCGCAGCGGCAATATTCTGGTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCGTTTCTGGGAGCGGGTCTTTCCAGTATTGC
GTGTTCCCCGCCCCAGCGGGGATAAACCG	CAGGGGAAGAGGTTCCGGCCCAGCAGTTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGGTCGTGTTTGACTCAACGCTCCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTAGAATTACGCATTGAGCCGATGATGTA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>CP030209|3|1|990383-991756|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAATTTTCGGGAACGGCGACGGAATCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATCATCATGGCCAGCGCTGGCGCGCTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATGATTATATCGATCGACCAATCGATGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGGTGAGACAAATCATTCCAGATTGATCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTTAAACAGTAATTTAAAATTGTTAGCGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACGGCGGCGCGGCATTCTGCGGTGCAAATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTCCAGCGCGCCAAAATCAGGAGATTCCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCCGGCATTCGGCTATGCCTATTCATATGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCACTACCGTCTATCTCTTCCGGATACAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACCCGGCAGCAGGGGTAATTCATACAGCATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTGGTGAAGGGCGCATTTGAGGACCCGTTA
GTGTTCCCCGCGTCAGCGGGGATAAACCG	CTTGCAGCCGAATACGGTATAGAGTGGGACGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCTGTCCTGCGTCAGCGTTACCAGCTTCATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATTCAATTACGACTCGCTGCCTGACGGGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTGAGCGGACGGGAGCTGGCCGAATGACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGTTTTTACTTTTGCTGCATTCCGCCTCCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCTGGCAGGAATACAAACTTGTGATGCTGCG
GTGTTCCCCGCGCTAGCGGGGATAAACCG	ACCGCAGGCGCAGCGGCAATATTCTGGTTCAA
GTGTTCCCCGCGCTAGCGGGGATAAACCG	TCGTTTCTGGGAGCGGGTCTTTCCAGTATTGC
GTGTTCCCCGCCCCAGCGGGGATAAACCG	CAGGGGAAGAGGTTCCGGCCCAGCAGTTCTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGGTCGTGTTTGACTCAACGCTCCCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTAGAATTACGCATTGAGCCGATGATGTA
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
CP030209.1\|AXD51565.1\|979948_980455_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP030209.1\|AXD51576.1\|995323_997036_+\|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP030209.1\|AXD51573.1\|991853_992651_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
CP030209.1\|AXD51568.1\|984039_984627_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP030209.1\|AXD51580.1\|1002130_1003690_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP030209.1\|AXD51577.1\|997111_997846_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP030209.1\|AXD51567.1\|981260_983960_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP030209.1\|AXD51564.1\|979463_979934_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP030209.1\|AXD51575.1\|993524_995324_+\|sulfite-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|182862
CP030209.1\|AXD55107.1\|993029_993200_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP030209.1\|AXD51563.1\|978930_979467_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP030209.1\|AXD51579.1\|999455_1002119_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP030209.1\|AXD51570.1\|986260_987898_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP030209.1\|AXD51578.1\|998058_999012_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP030209.1\|AXD51571.1\|987980_989279_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP030209.1\|AXD51569.1\|985232_986033_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP030209.1\|AXD51572.1\|989414_990086_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP030209.1\|AXD51566.1\|980474_981248_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP030209.1\|AXD51574.1\|992738_993101_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP030209.1\|AXD51581.1\|1003686_1004247_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862

Protein	Function_ID	Function_description	E-value
CP030209.1\|AXD51565.1\|979948_980455_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.70399e-105
CP030209.1\|AXD51576.1\|995323_997036_+\|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP030209.1\|AXD51573.1\|991853_992651_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.88693e-103
CP030209.1\|AXD51568.1\|984039_984627_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP030209.1\|AXD51580.1\|1002130_1003690_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.1114e-174
CP030209.1\|AXD51577.1\|997111_997846_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
CP030209.1\|AXD51567.1\|981260_983960_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP030209.1\|AXD51564.1\|979463_979934_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100
CP030209.1\|AXD51575.1\|993524_995324_+\|sulfite-reductase-subunit-alpha	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP030209.1\|AXD51563.1\|978930_979467_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	4.06604e-121
CP030209.1\|AXD51579.1\|999455_1002119_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP030209.1\|AXD51570.1\|986260_987898_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP030209.1\|AXD51578.1\|998058_999012_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP030209.1\|AXD51571.1\|987980_989279_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP030209.1\|AXD51569.1\|985232_986033_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.00771e-158
CP030209.1\|AXD51572.1\|989414_990086_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP030209.1\|AXD51566.1\|980474_981248_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	1.81926e-180
CP030209.1\|AXD51574.1\|992738_993101_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP030209.1\|AXD51581.1\|1003686_1004247_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34

>CP030209.1|AXD51572.1|989414_990086_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP030209.1|AXD51571.1|987980_989279_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP030209.1|AXD51570.1|986260_987898_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP030209.1|AXD51569.1|985232_986033_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLSLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQVVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP030209.1|AXD51568.1|984039_984627_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP030209.1|AXD51567.1|981260_983960_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP030209.1|AXD51566.1|980474_981248_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQIKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASDFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP030209.1|AXD51565.1|979948_980455_-|fimbrial-protein
MTMLTRWKILVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP030209.1|AXD51564.1|979463_979934_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP030209.1|AXD51563.1|978930_979467_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSILPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ
>CP030209.1|AXD51573.1|991853_992651_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNASAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP030209.1|AXD51574.1|992738_993101_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP030209.1|AXD55107.1|993029_993200_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVWQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP030209.1|AXD51575.1|993524_995324_+|sulfite-reductase-subunit-alpha
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVESYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP030209.1|AXD51576.1|995323_997036_+|NADPH-dependent-assimilatory-sulfite-reductase-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGITFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIESGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP030209.1|AXD51577.1|997111_997846_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP030209.1|AXD51578.1|998058_999012_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWEKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSSIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP030209.1|AXD51579.1|999455_1002119_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP030209.1|AXD51580.1|1002130_1003690_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGPESPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKAIRTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP030209.1|AXD51581.1|1003686_1004247_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD

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Crispr_ID: CP030209_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP030209_4

1008015-1010974

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

48 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of CP030209_4

>merge|CP030209|4|1008015-1010974|CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCACAAATCACTGGTCGATTTCGTCGCACGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGCGACTAAACCGGACCAGCGCCCGCCCACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTGCTCGCTTGCTTCTACCCGTCCCGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGTTTTATTCGGCAGGGCATTGAATTTAATGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTATCTATTTTTCTGGCCCGTTTTCAATGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCGCGTTTTGCGTCAGCATATAGCCAATATGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTTGCATACGTCACTCATAGACAAATCACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGATTCTGGTAACGTCGCTGTACTGCCTGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGCATGAAACAACCGGCGGGGATCTCTATTGTGTTCCCCGCGCCAGCGGGGATAAACCGACAGCGTTAAAATGACGCCCGACGTTGTGGTGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGCTAACACATCACCATTATTACCAAATTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGACATTGCCCGCTGGGATGCGCGGCAACTGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAATTGCCTTTGCTGCCCGGCTCTTCTACGGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGATGAATAACGCGATTTACGAGGTTACGTATGTGTTCCCCGCGCCAGCGGGGATAAACCGATTAAATACCTGGAAAAATACCCCAAAGGGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAAAAATAGCGATAACGCGCCAGATCGTGAGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCATTTTTTATTTTCACGTTCGGCTTTCTCACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTAAATCGACCTACCTGTTAAACGCGTCAATGGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGCAGTAACAGTGTCGTTTTTATAACCGACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGGCATTAATGCGGGATTGTGTTTTCTGAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGGCAGAAACAATGGCGTCAGTAGCTCAGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTCAATGAGACTTTTCACACTGATAATGTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCTATTCCTGATCATCGCGCATTTGGCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGACCACCACGTAGCCGTAGGCTGTCGCCAGTTGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAATTACGTTGCGAACAGCGCGGCGAGAGACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGGATTGCATTCAATAAACATGTAAATAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACCGACACCTGCGTGGCTAGCGTTTTTTCGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAAAAACATTGAGTGCTTCTTGTACGTTCATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCTGCGTGCGTGCAACGGGTAACTAAGGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCATTGGGTAATTATATTCGCAATTTAAGCGATGTGTTCCCCGCGCCAGCGGGGATAAACCGATATTTTAAACCAGACTGACGCGATGATCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCCATCAAAGCTGCTGCGCTGGTGGCATAACCCGTGTTCCCCGCGCCAGCGGGGATAAACCGACTACGCGGCATGGCTGAACCCCGGATTCAAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCAGGCGGTGCCTACGTCGGATGAAGAGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTGGAAAGAACCAGAGCGTTGGTTATTGGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCCAAACCTCTACAGCGCTACCAACAGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCGCCCACCGGCATAAACGCGATAGCCGCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTTCCCGATCGCTTTATATCGGGGGCCATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCAGACGGACAGCTACGATACCGCTGACGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGTACTGGCTCTAAATTTAAAACTGGTCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCCACGTGCGCGGAGACGGCAACCGGTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCGACGCCAGATTTAATATTAATTCCCGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACGTAGAGATTGAGAACACAAATGACTCAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATTGCTCAGATTGGGAATTTGACCAGCGACCGTGTTCCCCGCGCCAGCGGGGATAGACCGACTATTTTTCAGGTGAATTACAGCGCCGCAACGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAAAAATTGACGCTATCAGGGAGAGCGCCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAAAACTATCTCTATCGCAGGCTGGATATGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGTGAACGCGTCGCCCGCTTTTTTGTAGCAGTGTTCCCCGCGTCAGCGGGGATAAACAC

>CP030209|4|3|1008015-1010974|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCACAAATCACTGGTCGATTTCGTCGCACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCGACTAAACCGGACCAGCGCCCGCCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCGCTTGCTTCTACCCGTCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGTTTTATTCGGCAGGGCATTGAATTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATCTATTTTTCTGGCCCGTTTTCAATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCGTTTTGCGTCAGCATATAGCCAATATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTGCATACGTCACTCATAGACAAATCACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTCTGGTAACGTCGCTGTACTGCCTGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCATGAAACAACCGGCGGGGATCTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGCGTTAAAATGACGCCCGACGTTGTGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGCTAACACATCACCATTATTACCAAATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACATTGCCCGCTGGGATGCGCGGCAACTGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTGCCTTTGCTGCCCGGCTCTTCTACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATGAATAACGCGATTTACGAGGTTACGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAATACCTGGAAAAATACCCCAAAGGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAATAGCGATAACGCGCCAGATCGTGAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATTTTTTATTTTCACGTTCGGCTTTCTCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAATCGACCTACCTGTTAAACGCGTCAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCAGTAACAGTGTCGTTTTTATAACCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGCATTAATGCGGGATTGTGTTTTCTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGGCAGAAACAATGGCGTCAGTAGCTCAGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTCAATGAGACTTTTCACACTGATAATGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCTATTCCTGATCATCGCGCATTTGGCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCACCACGTAGCCGTAGGCTGTCGCCAGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTACGTTGCGAACAGCGCGGCGAGAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGATTGCATTCAATAAACATGTAAATAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCGACACCTGCGTGGCTAGCGTTTTTTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAAAAACATTGAGTGCTTCTTGTACGTTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCGTGCGTGCAACGGGTAACTAAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGGGTAATTATATTCGCAATTTAAGCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTTTAAACCAGACTGACGCGATGATCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATCAAAGCTGCTGCGCTGGTGGCATAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTACGCGGCATGGCTGAACCCCGGATTCAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCAGGCGGTGCCTACGTCGGATGAAGAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGAAAGAACCAGAGCGTTGGTTATTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCCAAACCTCTACAGCGCTACCAACAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGCCCACCGGCATAAACGCGATAGCCGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTCCCGATCGCTTTATATCGGGGGCCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAGACGGACAGCTACGATACCGCTGACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGTACTGGCTCTAAATTTAAAACTGGTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCCACGTGCGCGGAGACGGCAACCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGACGCCAGATTTAATATTAATTCCCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGTAGAGATTGAGAACACAAATGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGCTCAGATTGGGAATTTGACCAGCGACC
GTGTTCCCCGCGCCAGCGGGGATAGACCG	ACTATTTTTCAGGTGAATTACAGCGCCGCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGTGAACGCGTCGCCCGCTTTTTTGTAGCA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

>CP030209|4|2|1008015-1010974|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCACAAATCACTGGTCGATTTCGTCGCACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTGCGACTAAACCGGACCAGCGCCCGCCCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGCTCGCTTGCTTCTACCCGTCCCGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGTTTTATTCGGCAGGGCATTGAATTTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTATCTATTTTTCTGGCCCGTTTTCAATGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCGCGTTTTGCGTCAGCATATAGCCAATATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTTGCATACGTCACTCATAGACAAATCACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGATTCTGGTAACGTCGCTGTACTGCCTGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCGCATGAAACAACCGGCGGGGATCTCTATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAGCGTTAAAATGACGCCCGACGTTGTGGTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGCTAACACATCACCATTATTACCAAATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACATTGCCCGCTGGGATGCGCGGCAACTGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AATTGCCTTTGCTGCCCGGCTCTTCTACGGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGATGAATAACGCGATTTACGAGGTTACGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTAAATACCTGGAAAAATACCCCAAAGGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAATAGCGATAACGCGCCAGATCGTGAGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCATTTTTTATTTTCACGTTCGGCTTTCTCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTAAATCGACCTACCTGTTAAACGCGTCAATG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCGCAGTAACAGTGTCGTTTTTATAACCGAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGGCATTAATGCGGGATTGTGTTTTCTGAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGGCAGAAACAATGGCGTCAGTAGCTCAGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTCAATGAGACTTTTCACACTGATAATGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCTATTCCTGATCATCGCGCATTTGGCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACCACCACGTAGCCGTAGGCTGTCGCCAGTTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAATTACGTTGCGAACAGCGCGGCGAGAGACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGATTGCATTCAATAAACATGTAAATAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACCGACACCTGCGTGGCTAGCGTTTTTTCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAAAAACATTGAGTGCTTCTTGTACGTTCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTGCGTGCGTGCAACGGGTAACTAAGGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGGGTAATTATATTCGCAATTTAAGCGAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTTTAAACCAGACTGACGCGATGATCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCATCAAAGCTGCTGCGCTGGTGGCATAACCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTACGCGGCATGGCTGAACCCCGGATTCAAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCAGGCGGTGCCTACGTCGGATGAAGAGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTGGAAAGAACCAGAGCGTTGGTTATTGGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCCAAACCTCTACAGCGCTACCAACAGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGCCCACCGGCATAAACGCGATAGCCGCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTTCCCGATCGCTTTATATCGGGGGCCATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAGACGGACAGCTACGATACCGCTGACGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGTACTGGCTCTAAATTTAAAACTGGTCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCCCACGTGCGCGGAGACGGCAACCGGTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTCGACGCCAGATTTAATATTAATTCCCGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGACGTAGAGATTGAGAACACAAATGACTCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATTGCTCAGATTGGGAATTTGACCAGCGACC
GTGTTCCCCGCGCCAGCGGGGATAGACCG	ACTATTTTTCAGGTGAATTACAGCGCCGCAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAAAAATTGACGCTATCAGGGAGAGCGCCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAAAACTATCTCTATCGCAGGCTGGATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGTGAACGCGTCGCCCGCTTTTTTGTAGCA
GTGTTCCCCGCGTCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
CP030209.1\|AXD51581.1\|1003686_1004247_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP030209.1\|AXD51596.1\|1018345_1019107_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP030209.1\|AXD51589.1\|1013203_1014643_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
CP030209.1\|AXD51588.1\|1012285_1013194_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP030209.1\|AXD51586.1\|1007624_1007918_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
CP030209.1\|AXD51584.1\|1006057_1006708_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP030209.1\|AXD51577.1\|997111_997846_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP030209.1\|AXD51582.1\|1004260_1005319_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
CP030209.1\|AXD51580.1\|1002130_1003690_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP030209.1\|AXD51592.1\|1015799_1016111_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP030209.1\|AXD51594.1\|1016839_1017319_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP030209.1\|AXD51583.1\|1005329_1006076_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP030209.1\|AXD51593.1\|1016129_1016840_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP030209.1\|AXD51579.1\|999455_1002119_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
CP030209.1\|AXD51590.1\|1014629_1015235_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP030209.1\|AXD51578.1\|998058_999012_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP030209.1\|AXD51587.1\|1010988_1012035_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP030209.1\|AXD51591.1\|1015252_1015609_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP030209.1\|AXD51585.1\|1006704_1007625_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP030209.1\|AXD51595.1\|1017315_1018365_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884

Protein	Function_ID	Function_description	E-value
CP030209.1\|AXD51581.1\|1003686_1004247_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
CP030209.1\|AXD51596.1\|1018345_1019107_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP030209.1\|AXD51589.1\|1013203_1014643_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP030209.1\|AXD51588.1\|1012285_1013194_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP030209.1\|AXD51586.1\|1007624_1007918_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	5.34547e-63
CP030209.1\|AXD51584.1\|1006057_1006708_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	8.78501e-77
CP030209.1\|AXD51577.1\|997111_997846_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	8.83466e-139
CP030209.1\|AXD51582.1\|1004260_1005319_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.33332e-137
CP030209.1\|AXD51580.1\|1002130_1003690_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.1114e-174
CP030209.1\|AXD51592.1\|1015799_1016111_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP030209.1\|AXD51594.1\|1016839_1017319_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
CP030209.1\|AXD51583.1\|1005329_1006076_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.42782e-48
CP030209.1\|AXD51593.1\|1016129_1016840_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
CP030209.1\|AXD51579.1\|999455_1002119_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
CP030209.1\|AXD51590.1\|1014629_1015235_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP030209.1\|AXD51578.1\|998058_999012_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP030209.1\|AXD51587.1\|1010988_1012035_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP030209.1\|AXD51591.1\|1015252_1015609_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP030209.1\|AXD51585.1\|1006704_1007625_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.63116e-157
CP030209.1\|AXD51595.1\|1017315_1018365_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0

>CP030209.1|AXD51586.1|1007624_1007918_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEIRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP030209.1|AXD51585.1|1006704_1007625_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP030209.1|AXD51584.1|1006057_1006708_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTICKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVLNDPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>CP030209.1|AXD51583.1|1005329_1006076_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>CP030209.1|AXD51582.1|1004260_1005319_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYVQGTAFKDFNVMNQQGSMKDVLDFICA
>CP030209.1|AXD51581.1|1003686_1004247_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>CP030209.1|AXD51580.1|1002130_1003690_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAPLEHAFQFGPESPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKAIRTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>CP030209.1|AXD51579.1|999455_1002119_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERSVDIGWLHSEESCLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQKGKFYCDRAFARQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>CP030209.1|AXD51578.1|998058_999012_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWEKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSSIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDLLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>CP030209.1|AXD51577.1|997111_997846_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP030209.1|AXD51587.1|1010988_1012035_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKGIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQKHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP030209.1|AXD51588.1|1012285_1013194_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP030209.1|AXD51589.1|1013203_1014643_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREDAFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP030209.1|AXD51590.1|1014629_1015235_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP030209.1|AXD51591.1|1015252_1015609_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP030209.1|AXD51592.1|1015799_1016111_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP030209.1|AXD51593.1|1016129_1016840_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP030209.1|AXD51594.1|1016839_1017319_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP030209.1|AXD51595.1|1017315_1018365_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP030209.1|AXD51596.1|1018345_1019107_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP030209_4	4.34\|1010058\|32\|CP030209\|CRISPRCasFinder,CRT	1010058-1010089	32	CP030209.1	833367-833398	1	0.969

1. spacer 4.34|1010058|32|CP030209|CRISPRCasFinder,CRT matches to position: 833367-833398, mismatch: 1, identity: 0.969

ccccaggcggtgcctacgtcggatgaagagcc	CRISPR spacer
ccccaggcggtgccgacgtcggatgaagagcc	Protospacer
************** *****************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP030209_3	3.9\|990901\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990901-990932	32	CP053320	Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence	11945-11976	0	1.0
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	CP053405	Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence	21764-21795	1	0.969
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_011802	Salmonella enterica bacteriophage SE1, complete genome	15039-15075	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	CP051272	Salmonella phage SW-70, complete genome	35832-35868	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	CP051278	Salmonella phage ST-87, complete genome	25848-25884	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	CP051288	Salmonella phage ST-29, complete genome	38690-38726	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	MW013502	Salmonella virus L cI-40 13-am43, complete genome	31677-31713	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	CP051285	Salmonella phage ST-32, complete genome	31784-31820	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_004348	Enterobacteria phage ST64T, complete genome	14879-14915	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	MW013503	Salmonella virus L cII-101, complete genome	31678-31714	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_014900	Salmonella phage ST160, complete genome	15107-15143	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	AY052766	Salmonella typhimurium bacteriophage ST64T, complete genome	14879-14915	1	0.973
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	MF188997	Salmonella phage vB_SalP_PM43, complete genome	14774-14810	1	0.973
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	NZ_CP012163	Enterobacter roggenkampii strain 35734 plasmid p35734-109.753kb, complete sequence	32903-32934	2	0.938
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	NZ_CP009851	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence	36222-36253	2	0.938
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	NZ_CP029434	Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence	11707-11738	2	0.938
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	NZ_CP029428	Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence	48089-48120	2	0.938
CP030209_3	3.22\|991696\|32\|CP030209\|CRISPRCasFinder,CRT	991696-991727	32	NZ_CP029440	Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence	49931-49962	2	0.938
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_016160	Escherichia phage HK75, complete genome	28597-28633	5	0.865
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_019705	Enterobacteria phage mEpX2, complete genome	29051-29087	5	0.865
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	KY979108	Escherichia phage ECP1, complete genome	432-468	5	0.865
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_019719	Enterobacteria phage HK633, complete genome	31745-31781	5	0.865
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	JF974339	Enterobacteria phage IME10, complete genome	9728-9764	5	0.865
CP030209_5	5.1\|1470131\|37\|CP030209\|CRISPRCasFinder	1470131-1470167	37	NC_005344	Enterobacteria phage Sf6, complete genome	28415-28451	5	0.865
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	1245737-1245768	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1260212-1260243	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1873900-1873931	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1619085-1619116	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	1359834-1359865	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	384109-384140	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1433904-1433935	6	0.812
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	1267494-1267525	6	0.812
CP030209_3	3.3\|990534\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990534-990565	32	NC_023688	Aeromonas phage PX29, complete genome	79252-79283	7	0.781
CP030209_3	3.3\|990534\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990534-990565	32	MH791407	UNVERIFIED: Aeromonas phage AsFcp_4, partial genome	204020-204051	7	0.781
CP030209_3	3.3\|990534\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990534-990565	32	MH791401	UNVERIFIED: Aeromonas phage AsFcp_2, complete genome	28279-28310	7	0.781
CP030209_3	3.12\|991084\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991084-991115	32	MK016493	Brevibacterium phage Cantare, complete genome	66868-66899	7	0.781
CP030209_4	4.15\|1008898\|32\|CP030209\|CRISPRCasFinder,CRT	1008898-1008929	32	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	13878-13909	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP011282	Enterococcus faecium strain E39 plasmid p1, complete sequence	13001-13032	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP015123	Enterococcus faecium strain E39 plasmid p3, complete sequence	44707-44738	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	41978-42009	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	53005-53036	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	256752-256783	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	70274-70305	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP043485	Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence	59254-59285	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	39395-39426	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP012367	Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence	18442-18473	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP012385	Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence	80010-80041	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	48651-48682	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	81154-81185	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018073	Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence	123918-123949	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	182265-182296	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	13396-13427	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027502	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence	39395-39426	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027503	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence	42063-42094	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135288	Enterococcus faecium isolate E7199 plasmid 2	13001-13032	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135333	Enterococcus faecium isolate E7471 plasmid 3	13388-13419	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	36293-36324	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	139560-139591	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	195767-195798	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	41938-41969	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP027514	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence	42062-42093	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135244	Enterococcus faecium isolate E6988 plasmid 2	13078-13109	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135279	Enterococcus faecium isolate E6975 plasmid 2	13000-13031	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135255	Enterococcus faecium isolate E7098 plasmid 2	12992-13023	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135238	Enterococcus faecium isolate E7067 plasmid 4	46087-46118	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135199	Enterococcus faecium isolate E6055 plasmid 3	39909-39940	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135182	Enterococcus faecium isolate E1774 plasmid 2	13388-13419	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	116672-116703	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP041258	Enterococcus faecium strain 515 plasmid p27, complete sequence	37189-37220	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP017798	Enterococcus faecium strain E243 plasmid unnamed1, complete sequence	13001-13032	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP017799	Enterococcus faecium strain E243 plasmid unnamed2, complete sequence	44707-44738	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135436	Enterococcus faecium isolate E8691 plasmid 2	45617-45648	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	42452-42483	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	183138-183169	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135227	Enterococcus faecium isolate E7025 plasmid 2	13388-13419	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135325	Enterococcus faecium isolate E7654 plasmid 2	12992-13023	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	201420-201451	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	41286-41317	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135318	Enterococcus faecium isolate E7663 plasmid 2	12992-13023	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135373	Enterococcus faecium isolate E8172 plasmid 2	45685-45716	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135374	Enterococcus faecium isolate E8172 plasmid 3	39909-39940	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP015517	Enterococcus hirae strain R17 plasmid, complete sequence	37848-37879	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	16430-16461	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	56060-56091	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	66795-66826	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	197938-197969	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP014530	Enterococcus faecium strain E745 plasmid pl1, complete sequence	19303-19334	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	44058-44089	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	45829-45860	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	24259-24290	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	252603-252634	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP040704	Enterococcus faecium strain HOU503 plasmid p1, complete sequence	112021-112052	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP017793	Enterococcus faecium strain E240 plasmid unnamed1, complete sequence	13001-13032	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP017794	Enterococcus faecium strain E240 plasmid unnamed2, complete sequence	44680-44711	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	45468-45499	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023790	Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023790	Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence	67823-67854	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023800	Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023800	Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence	67823-67854	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	45467-45498	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	45467-45498	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	246076-246107	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	45469-45500	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP040851	Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence	26032-26063	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135193	Enterococcus faecium isolate E4438 plasmid 3	46292-46323	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	39394-39425	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135308	Enterococcus faecium isolate E7240 plasmid 2	13001-13032	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LR135309	Enterococcus faecium isolate E7240 plasmid 3	20728-20759	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP040237	Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence	39394-39425	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	67822-67853	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023812	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.5, complete sequence	44577-44608	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP033207	Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence	79118-79149	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018129	Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence	198505-198536	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023805	Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023805	Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence	67822-67853	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	13388-13419	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	19575-19606	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	53005-53036	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	256752-256783	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP012461	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence	179572-179603	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP012463	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p3, complete sequence	5177-5208	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP012432	Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p1, complete sequence	20833-20864	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023795	Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023795	Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence	67822-67853	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023781	Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence	13079-13110	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP023781	Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence	67823-67854	7	0.781
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_LT598664	Enterococcus faecium isolate Ef_aus00233 plasmid 2	126785-126816	7	0.781
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	NC_031059	Rhodovulum phage vB_RhkS_P1, complete genome	21034-21065	7	0.781
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	MN693914	Marine virus AFVG_250M396, complete genome	1982-2013	7	0.781
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	437878-437909	8	0.75
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP041064	Bacillus megaterium strain KNU-01 plasmid pKNU_01_1, complete sequence	98398-98429	8	0.75
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	CP041518	Bacillus aryabhattai strain KNU10 plasmid unnamed2, complete sequence	92258-92289	8	0.75
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP018876	Bacillus megaterium strain JX285 plasmid 3, complete sequence	11707-11738	8	0.75
CP030209_3	3.6\|990717\|33\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990717-990749	33	MG428990	Klebsiella phage Menlow, complete genome	29444-29476	8	0.758
CP030209_3	3.6\|990717\|33\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990717-990749	33	MN045230	Klebsiella phage Magnus, complete genome	29482-29514	8	0.758
CP030209_3	3.13\|991145\|33\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991145-991177	33	NZ_LT559121	Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence	47191-47223	8	0.758
CP030209_3	3.19\|991513\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991513-991544	32	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	354159-354190	8	0.75
CP030209_3	3.19\|991513\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991513-991544	32	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	434228-434259	8	0.75
CP030209_3	3.19\|991513\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991513-991544	32	NZ_CP053657	Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence	67667-67698	8	0.75
CP030209_4	4.4\|1008227\|32\|CP030209\|CRISPRCasFinder,CRT	1008227-1008258	32	NC_012970	Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence	37454-37485	8	0.75
CP030209_4	4.5\|1008288\|32\|CP030209\|CRISPRCasFinder,CRT	1008288-1008319	32	NZ_CP042964	Bartonella kosoyi strain Tel Aviv plasmid pTLV-1, complete sequence	19042-19073	8	0.75
CP030209_4	4.19\|1009142\|32\|CP030209\|CRISPRCasFinder,CRT	1009142-1009173	32	NZ_CP032091	Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence	567483-567514	8	0.75
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP045721	Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence	409950-409981	8	0.75
CP030209_4	4.21\|1009264\|32\|CP030209\|CRISPRCasFinder,CRT	1009264-1009295	32	NZ_CP022517	Pantoea vagans strain FBS135 plasmid pPant1, complete sequence	523953-523984	8	0.75
CP030209_4	4.23\|1009387\|32\|CP030209\|CRISPRCasFinder,CRT	1009387-1009418	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	1056414-1056445	8	0.75
CP030209_4	4.24\|1009448\|32\|CP030209\|CRISPRCasFinder,CRT	1009448-1009479	32	NZ_CP006372	Aureimonas sp. AU20 plasmid pAU20e, complete sequence	727-758	8	0.75
CP030209_4	4.26\|1009570\|32\|CP030209\|CRISPRCasFinder,CRT	1009570-1009601	32	CP022016	Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence	93843-93874	8	0.75
CP030209_4	4.28\|1009692\|32\|CP030209\|CRISPRCasFinder,CRT	1009692-1009723	32	NC_048827	Vibrio phage vB_VchM_Kuja, complete genome	71744-71775	8	0.75
CP030209_4	4.36\|1010180\|32\|CP030209\|CRISPRCasFinder,CRT	1010180-1010211	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	947823-947854	8	0.75
CP030209_4	4.41\|1010486\|32\|CP030209\|CRISPRCasFinder,CRT	1010486-1010517	32	NC_016037	Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence	124812-124843	8	0.75
CP030209_4	4.43\|1010608\|32\|CP030209\|CRISPRCasFinder,CRT	1010608-1010639	32	NZ_KM406416	Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence	52772-52803	8	0.75
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	975173-975204	9	0.719
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	213306-213337	9	0.719
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	263587-263618	9	0.719
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	588013-588044	9	0.719
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	767606-767637	9	0.719
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_LR735438	Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2	2704-2735	9	0.719
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP033731	Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed1, complete sequence	27317-27348	9	0.719
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP016854	Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Nb, complete sequence	40712-40743	9	0.719
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP014130	Staphylococcus epidermidis strain FDAARGOS_161 plasmid unnamed1, complete sequence	14625-14656	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP021025	Rhizobium sp. TAL182 plasmid pRetTAL182a, complete sequence	58977-59008	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	170976-171007	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	170976-171007	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	169417-169448	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	173664-173695	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	167782-167813	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013512	Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence	58976-59007	9	0.719
CP030209_3	3.15\|991268\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991268-991299	32	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	170976-171007	9	0.719
CP030209_3	3.19\|991513\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991513-991544	32	NC_015583	Novosphingobium sp. PP1Y plasmid Mpl, complete sequence	184422-184453	9	0.719
CP030209_3	3.21\|991635\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991635-991666	32	NZ_CP039693	Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence	165994-166025	9	0.719
CP030209_4	4.1\|1008044\|32\|CP030209\|CRISPRCasFinder,CRT	1008044-1008075	32	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	355684-355715	9	0.719
CP030209_4	4.1\|1008044\|32\|CP030209\|CRISPRCasFinder,CRT	1008044-1008075	32	MK016664	Synechococcus phage S-B68, complete genome	8391-8422	9	0.719
CP030209_4	4.15\|1008898\|32\|CP030209\|CRISPRCasFinder,CRT	1008898-1008929	32	NZ_CP031600	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence	92209-92240	9	0.719
CP030209_4	4.23\|1009387\|32\|CP030209\|CRISPRCasFinder,CRT	1009387-1009418	32	NZ_CP031163	Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence	182274-182305	9	0.719
CP030209_4	4.25\|1009509\|32\|CP030209\|CRISPRCasFinder,CRT	1009509-1009540	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	137187-137218	9	0.719
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	NZ_CP039899	Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence	217130-217161	9	0.719
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	NZ_CP039890	Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence	217130-217161	9	0.719
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	NC_019514	Erwinia phage vB_EamP-S6, complete genome	5879-5910	9	0.719
CP030209_4	4.36\|1010180\|32\|CP030209\|CRISPRCasFinder,CRT	1010180-1010211	32	NZ_CP018781	Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence	259719-259750	9	0.719
CP030209_4	4.40\|1010425\|32\|CP030209\|CRISPRCasFinder,CRT	1010425-1010456	32	AP014325	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S34-C6, * SEQUENCING IN PROGRESS *	21699-21730	9	0.719
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_KX009059	Pseudomonas syringae pv. actinidiae strain RT685 plasmid pMG1_RT685, complete sequence	46021-46052	10	0.688
CP030209_3	3.5\|990656\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990656-990687	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	980811-980842	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	NC_019241	Vibrio cincinnatiensis plasmid pVC, complete sequence	5568-5599	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	MN719123	Vibrio phage VALG_phi6, complete genome	7958-7989	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017895	Vibrio phage K04M1_VK04M1, complete sequence	6995-7026	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017906	Vibrio phage K05K4_VK05K4_2, complete sequence	7494-7525	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017906	Vibrio phage K05K4_VK05K4_2, complete sequence	13243-13274	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	MN690600	Vibrio phage VALG_phi8, complete genome	1105-1136	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017905	Vibrio phage K05K4_VK05K4_1, complete sequence	7392-7423	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017905	Vibrio phage K05K4_VK05K4_1, complete sequence	14971-15002	10	0.688
CP030209_3	3.14\|991207\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	991207-991238	32	CP017905	Vibrio phage K05K4_VK05K4_1, complete sequence	20825-20856	10	0.688
CP030209_4	4.16\|1008959\|32\|CP030209\|CRISPRCasFinder,CRT	1008959-1008990	32	NZ_CP011518	Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence	518707-518738	10	0.688
CP030209_4	4.16\|1008959\|32\|CP030209\|CRISPRCasFinder,CRT	1008959-1008990	32	NZ_CP010898	Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence	40323-40354	10	0.688
CP030209_4	4.16\|1008959\|32\|CP030209\|CRISPRCasFinder,CRT	1008959-1008990	32	MN434096	Klebsiella phage JIPh_Kp127, complete genome	1806-1837	10	0.688
CP030209_4	4.16\|1008959\|32\|CP030209\|CRISPRCasFinder,CRT	1008959-1008990	32	MK630230	Klebsiella phage Spivey, complete genome	4178-4209	10	0.688
CP030209_4	4.16\|1008959\|32\|CP030209\|CRISPRCasFinder,CRT	1008959-1008990	32	MG459987	Klebsiella phage Sugarland, complete genome	1851-1882	10	0.688
CP030209_4	4.32\|1009936\|32\|CP030209\|CRISPRCasFinder,CRT	1009936-1009967	32	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	72998-73029	10	0.688
CP030209_4	4.35\|1010119\|32\|CP030209\|CRISPRCasFinder,CRT	1010119-1010150	32	NZ_CP053812	Vibrio cholerae strain W6G plasmid pW6G, complete sequence	102235-102266	10	0.688
CP030209_4	4.35\|1010119\|32\|CP030209\|CRISPRCasFinder,CRT	1010119-1010150	32	NZ_CP053815	Vibrio cholerae strain W7G plasmid pW7G, complete sequence	58066-58097	10	0.688
CP030209_4	4.42\|1010547\|32\|CP030209\|CRISPRCasFinder,CRT	1010547-1010578	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	363563-363594	10	0.688
CP030209_4	4.44\|1010669\|32\|CP030209\|CRISPRCasFinder,CRT	1010669-1010700	32	MK449011	Streptococcus phage Javan92, complete genome	36157-36188	10	0.688
CP030209_4	4.44\|1010669\|32\|CP030209\|CRISPRCasFinder,CRT	1010669-1010700	32	MK448835	Streptococcus phage Javan93, complete genome	36157-36188	10	0.688
CP030209_4	4.44\|1010669\|32\|CP030209\|CRISPRCasFinder,CRT	1010669-1010700	32	MK448836	Streptococcus phage Javan95, complete genome	37400-37431	10	0.688
CP030209_4	4.44\|1010669\|32\|CP030209\|CRISPRCasFinder,CRT	1010669-1010700	32	MK448825	Streptococcus phage Javan639, complete genome	37400-37431	10	0.688
CP030209_4	4.48\|1010914\|32\|CP030209\|CRISPRCasFinder,CRT	1010914-1010945	32	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	325433-325464	10	0.688
CP030209_3	3.2\|990473\|32\|CP030209\|PILER-CR,CRISPRCasFinder,CRT	990473-990504	32	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	299192-299223	11	0.656
CP030209_4	4.12\|1008715\|32\|CP030209\|CRISPRCasFinder,CRT	1008715-1008746	32	MN508620	UNVERIFIED: Pseudomonas phage E2005-24-39, complete genome	62483-62514	11	0.656
CP030209_4	4.12\|1008715\|32\|CP030209\|CRISPRCasFinder,CRT	1008715-1008746	32	MN871454	UNVERIFIED: Pseudomonas phage Pa-A, complete genome	62115-62146	11	0.656
CP030209_4	4.12\|1008715\|32\|CP030209\|CRISPRCasFinder,CRT	1008715-1008746	32	LC472881	Pseudomonas phage R12 DNA, complete genome	9496-9527	11	0.656
CP030209_4	4.12\|1008715\|32\|CP030209\|CRISPRCasFinder,CRT	1008715-1008746	32	NC_026600	Pseudomonas phage vB_PaeM_C1-14_Ab28, complete genome	39874-39905	11	0.656
CP030209_4	4.13\|1008776\|32\|CP030209\|CRISPRCasFinder,CRT	1008776-1008807	32	MN693859	Marine virus AFVG_250M1186, complete genome	14836-14867	11	0.656
CP030209_4	4.26\|1009570\|32\|CP030209\|CRISPRCasFinder,CRT	1009570-1009601	32	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	220436-220467	11	0.656

1. spacer 3.9|990901|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP053320 (Salmonella enterica subsp. arizonae serovar 41:z4,z23:- strain 2016K-0011 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tggtcactaccgtctatctcttccggatacac	CRISPR spacer
tggtcactaccgtctatctcttccggatacac	Protospacer
********************************

2. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to CP053405 (Salmonella enterica strain 2010K-2057 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccgatgatgta	Protospacer
********.***********************

3. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_011802 (Salmonella enterica bacteriophage SE1, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

4. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to CP051272 (Salmonella phage SW-70, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

5. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to CP051278 (Salmonella phage ST-87, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

6. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to CP051288 (Salmonella phage ST-29, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

7. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to MW013502 (Salmonella virus L cI-40 13-am43, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
********************************.****

8. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to CP051285 (Salmonella phage ST-32, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

9. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_004348 (Enterobacteria phage ST64T, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
********************************.****

10. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to MW013503 (Salmonella virus L cII-101, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
********************************.****

11. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_014900 (Salmonella phage ST160, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggatcacagcgaatg	Protospacer
************************ ************

12. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to AY052766 (Salmonella typhimurium bacteriophage ST64T, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
********************************.****

13. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to MF188997 (Salmonella phage vB_SalP_PM43, complete genome) position: , mismatch: 1, identity: 0.973

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatgacgcggctcacagcaaatg	Protospacer
********************************.****

14. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012163 (Enterobacter roggenkampii strain 35734 plasmid p35734-109.753kb, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcatcgagccgatgatgta	Protospacer
********.********.**************

15. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP009851 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcatcgagccgatgatgta	Protospacer
********.********.**************

16. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP029434 (Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

17. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP029428 (Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

18. spacer 3.22|991696|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP029440 (Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence) position: , mismatch: 2, identity: 0.938

attttagaattacgcattgagccgatgatgta	CRISPR spacer
attttagagttacgcattgagccaatgatgta	Protospacer
********.**************.********

19. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

20. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

21. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

22. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

23. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

24. spacer 5.1|1470131|37|CP030209|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 5, identity: 0.865

acgcaaacaccagtaatgacgcggctcacagcgaatg	CRISPR spacer
acgcaaacaccagtaatggcgcggctctcagcggaga	Protospacer
******************.******** *****.* .

25. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

26. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

27. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

28. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

29. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

30. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

31. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

32. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

cttgcagccgaatacggtataga-gtgggacgg	CRISPR spacer
cttgcagccgaatgcggcatagaggctgggcg-	Protospacer
*************.***.***** *. **.**

33. spacer 3.3|990534|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_023688 (Aeromonas phage PX29, complete genome) position: , mismatch: 7, identity: 0.781

aatgattatatcgatcgaccaatcgatgagca	CRISPR spacer
atcggttatatcgatgaaccaatcgatgaact	Protospacer
* .*.********** .************.*

34. spacer 3.3|990534|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MH791407 (UNVERIFIED: Aeromonas phage AsFcp_4, partial genome) position: , mismatch: 7, identity: 0.781

aatgattatatcgatcgaccaatcgatgagca	CRISPR spacer
atcggttatatcgatgaaccaatcgatgaact	Protospacer
* .*.********** .************.*

35. spacer 3.3|990534|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MH791401 (UNVERIFIED: Aeromonas phage AsFcp_2, complete genome) position: , mismatch: 7, identity: 0.781

aatgattatatcgatcgaccaatcgatgagca	CRISPR spacer
atcggttatatcgatgaaccaatcgatgaact	Protospacer
* .*.********** .************.*

36. spacer 3.12|991084|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MK016493 (Brevibacterium phage Cantare, complete genome) position: , mismatch: 7, identity: 0.781

cttgcagccgaatacggtatagagtgggacgg	CRISPR spacer
cattgcgccgaatacggcatcgagtgggacga	Protospacer
* *   ***********.** **********.

37. spacer 4.15|1008898|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 7, identity: 0.781

attaaatacctggaaaaataccccaaaggggc	CRISPR spacer
atataatacctggaaaaatacaacaaagtgct	Protospacer
**  *****************  ***** * .

38. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP011282 (Enterococcus faecium strain E39 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

39. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP015123 (Enterococcus faecium strain E39 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

40. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

41. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

42. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

43. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

44. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP043485 (Enterococcus faecium strain DMEA02 plasmid pDMEA1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

45. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

46. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012367 (Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

47. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012385 (Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

48. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

49. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

50. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018073 (Enterococcus faecium strain VRE001 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

51. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

52. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

53. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

54. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027503 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

55. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135288 (Enterococcus faecium isolate E7199 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

56. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135333 (Enterococcus faecium isolate E7471 plasmid 3) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

57. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

58. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

59. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

60. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027513 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

61. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP027514 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

62. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135244 (Enterococcus faecium isolate E6988 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

63. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

64. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135255 (Enterococcus faecium isolate E7098 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

65. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

66. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135238 (Enterococcus faecium isolate E7067 plasmid 4) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

67. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135199 (Enterococcus faecium isolate E6055 plasmid 3) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

68. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135182 (Enterococcus faecium isolate E1774 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

69. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

70. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP041258 (Enterococcus faecium strain 515 plasmid p27, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

71. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP017798 (Enterococcus faecium strain E243 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

72. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP017799 (Enterococcus faecium strain E243 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

73. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

74. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

75. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

76. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135227 (Enterococcus faecium isolate E7025 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

77. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

78. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135325 (Enterococcus faecium isolate E7654 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

79. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

80. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

81. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135318 (Enterococcus faecium isolate E7663 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

82. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

83. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135373 (Enterococcus faecium isolate E8172 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

84. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135374 (Enterococcus faecium isolate E8172 plasmid 3) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

85. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP015517 (Enterococcus hirae strain R17 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

86. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

87. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LN999988 (Enterococcus faecium isolate EFE11651 plasmid II, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

88. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

89. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

90. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP014530 (Enterococcus faecium strain E745 plasmid pl1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

91. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

92. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

93. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

94. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

95. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP040704 (Enterococcus faecium strain HOU503 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

96. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP017793 (Enterococcus faecium strain E240 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

97. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP017794 (Enterococcus faecium strain E240 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

98. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

99. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023790 (Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

100. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023790 (Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

101. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023800 (Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

102. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023800 (Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

103. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

104. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

105. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

106. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

107. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

108. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

109. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

110. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

111. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LR135309 (Enterococcus faecium isolate E7240 plasmid 3) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

112. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

113. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023809 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

114. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023809 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

115. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023812 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.5, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

116. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP033207 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

117. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018129 (Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

118. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023805 (Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

119. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023805 (Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

120. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

121. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP016164 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

122. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

123. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

124. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012461 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

125. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012463 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p3, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

126. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP012432 (Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

127. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023795 (Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

128. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023795 (Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

129. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023781 (Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

130. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP023781 (Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

131. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_LT598664 (Enterococcus faecium isolate Ef_aus00233 plasmid 2) position: , mismatch: 7, identity: 0.781

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
ccagcagaaacaatggcgacattagctaaaaa	Protospacer
 *.*************** ** ***** *..*

132. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to NC_031059 (Rhodovulum phage vB_RhkS_P1, complete genome) position: , mismatch: 7, identity: 0.781

ccatcaaagctgctgcgctggtgg-cataaccc	CRISPR spacer
atatcacagctgctgcgctggcggccatcaac-	Protospacer
 .**** **************.** *** * *

133. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to MN693914 (Marine virus AFVG_250M396, complete genome) position: , mismatch: 7, identity: 0.781

ccatca-aagctgctgcgctggtggcataaccc	CRISPR spacer
-catggcaagctgctgcgccggtgtcataaact	Protospacer
 *** . ************.**** ***** *.

134. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.75

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
accagcatcatggccagcgccgccgcgcctgt	Protospacer
*  * ***************.* *****..*.

135. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041064 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_1, complete sequence) position: , mismatch: 8, identity: 0.75

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
aatttgaacaggaatttaaaattgattactat	Protospacer
*****.***** ************ * .*  .

136. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP041518 (Bacillus aryabhattai strain KNU10 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
aatttgaacaggaatttaaaattgattactat	Protospacer
*****.***** ************ * .*  .

137. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018876 (Bacillus megaterium strain JX285 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.75

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
aatttgaacaggaatttaaaattgattactat	Protospacer
*****.***** ************ * .*  .

138. spacer 3.6|990717|33|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MG428990 (Klebsiella phage Menlow, complete genome) position: , mismatch: 8, identity: 0.758

gcaacggcggcgcggcattctgcggtgcaaata	CRISPR spacer
acaacggcggcgcggcagtcggcggcgagactc	Protospacer
.**************** ** ****.* .* *

139. spacer 3.6|990717|33|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MN045230 (Klebsiella phage Magnus, complete genome) position: , mismatch: 8, identity: 0.758

gcaacggcggcgcggcattctgcggtgcaaata	CRISPR spacer
acaacggcggcgcggcagtcggcggcgagactc	Protospacer
.**************** ** ****.* .* *

140. spacer 3.13|991145|33|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT559121 (Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence) position: , mismatch: 8, identity: 0.758

gcctgtcctgcgtcagcgttaccagcttcatgc	CRISPR spacer
ggctctcctgcgtcagcgttcccagcccgagcc	Protospacer
* ** *************** *****.. *  *

141. spacer 3.19|991513|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.75

tcgtttctg--ggagcgggtctttccagtattgc	CRISPR spacer
--attccaaatggagcgggtctttcaagtagtgc	Protospacer
  .**.* .  ************** **** ***

142. spacer 3.19|991513|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgtttctg--ggagcgggtctttccagtattgc	CRISPR spacer
--attccaaatggagcgggtctttcaagtagtgc	Protospacer
  .**.* .  ************** **** ***

143. spacer 3.19|991513|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053657 (Bacillus cereus strain CTMA_1571 plasmid p.1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgtttctg--ggagcgggtctttccagtattgc	CRISPR spacer
--attccaaatggagcgggtctttcaagtagtgc	Protospacer
  .**.* .  ************** **** ***

144. spacer 4.4|1008227|32|CP030209|CRISPRCasFinder,CRT matches to NC_012970 (Methylovorus glucosetrophus SIP3-4 plasmid pMsip01, complete sequence) position: , mismatch: 8, identity: 0.75

gcggttttattcggcagggcattgaatttaat	CRISPR spacer
ggcggattattcgtcagggcaatgaattttac	Protospacer
*  *  ******* ******* ******* *.

145. spacer 4.5|1008288|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP042964 (Bartonella kosoyi strain Tel Aviv plasmid pTLV-1, complete sequence) position: , mismatch: 8, identity: 0.75

aattatctatttttctggcccgttttcaatgc	CRISPR spacer
aaaaatctatttttcttgccagttttctaaaa	Protospacer
**  ************ *** ****** * .

146. spacer 4.19|1009142|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgcagtaacagtgtcgtttttataaccgac	CRISPR spacer
gtatcagtaaaagtgttgtttttataattggc	Protospacer
 *  ****** *****.**********..*.*

147. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP045721 (Pantoea eucalypti strain LMG 24197 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
cacgcagaaacaatgccgccagtagcacggta	Protospacer
   ************ **.******* *.* *

148. spacer 4.21|1009264|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP022517 (Pantoea vagans strain FBS135 plasmid pPant1, complete sequence) position: , mismatch: 8, identity: 0.75

acggcagaaacaatggcgtcagtagctcagga	CRISPR spacer
cacgcagaaacaatgccgccagtagcacggta	Protospacer
   ************ **.******* *.* *

149. spacer 4.23|1009387|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cccctattcctgatcatcgcgcatttggcggc	CRISPR spacer
gctcttgggctgctgatcgcgcatttggcggc	Protospacer
 *.**    *** * *****************

150. spacer 4.24|1009448|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP006372 (Aureimonas sp. AU20 plasmid pAU20e, complete sequence) position: , mismatch: 8, identity: 0.75

accaccacgtagccgtaggctgtcgccagttg	CRISPR spacer
aagatgtcgtagtcgtaggctgtcgccagtcc	Protospacer
*  *.  *****.*****************.

151. spacer 4.26|1009570|32|CP030209|CRISPRCasFinder,CRT matches to CP022016 (Salmonella enterica subsp. enterica serovar India str. SA20085604 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cggattgcattcaataaacatgtaaataggaa	CRISPR spacer
ggtattgcattcaataaacccgtaaaaatcca	Protospacer
 * **************** .***** *   *

152. spacer 4.28|1009692|32|CP030209|CRISPRCasFinder,CRT matches to NC_048827 (Vibrio phage vB_VchM_Kuja, complete genome) position: , mismatch: 8, identity: 0.75

ccaaaaaca---ttgagtgcttcttgtacgttcat	CRISPR spacer
---aaattgtttttgtgtgcttcttgtactttcat	Protospacer
   *** ..   *** ************* *****

153. spacer 4.36|1010180|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctcccaaacctctacagcgctaccaacaggaa	CRISPR spacer
ttcgacaacctctacaacgccaccaacagcca	Protospacer
.**   **********.***.********  *

154. spacer 4.41|1010486|32|CP030209|CRISPRCasFinder,CRT matches to NC_016037 (Komagataeibacter medellinensis NBRC 3288 plasmid pGXY010, complete sequence) position: , mismatch: 8, identity: 0.75

tggcccacgtgcgcggagacggcaaccggttc----	CRISPR spacer
tggccgacgtgcccggagacgg----cggtatcaca	Protospacer
***** ****** *********    **** .

155. spacer 4.43|1010608|32|CP030209|CRISPRCasFinder,CRT matches to NZ_KM406416 (Bifidobacterium breve strain JCM 7017 plasmid megaplasmid pMP7017, complete sequence) position: , mismatch: 8, identity: 0.75

cagacgtagagattgagaacacaaatgactca	CRISPR spacer
cagacgtagagattgaaaaaacagaatgcaaa	Protospacer
****************.** ***.*  .*  *

156. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 9, identity: 0.719

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
ggcggctccatggccagcgctcgcgcgatcgc	Protospacer
.. . * .************* ***** ****

157. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 9, identity: 0.719

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
cgcggcttcatggcccgcgctggcgagctcgg	Protospacer
 . . * ******** ********* *****

158. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 9, identity: 0.719

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
cgcggcttcatggcccgcgctggcgagctcgg	Protospacer
 . . * ******** ********* *****

159. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
ggcggctccatggccagcgctcgcgcgatcgc	Protospacer
.. . * .************* ***** ****

160. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
ggcggctccatggccagcgctcgcgcgatcgc	Protospacer
.. . * .************* ***** ****

161. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR735438 (Staphylococcus epidermidis strain none isolate Se_BPH0723 plasmid 2) position: , mismatch: 9, identity: 0.719

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
actttaaaaagtattttaaaattgtaaatagg	Protospacer
* ****** **** *********** *...

162. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033731 (Staphylococcus hominis strain FDAARGOS_575 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
actttaaaaagtattttaaaattgtaaatagg	Protospacer
* ****** **** *********** *...

163. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016854 (Staphylococcus aureus subsp. aureus strain 5118.N plasmid p5118.Nb, complete sequence) position: , mismatch: 9, identity: 0.719

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
actttaaaaagtattttaaaattgtaaatagg	Protospacer
* ****** **** *********** *...

164. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014130 (Staphylococcus epidermidis strain FDAARGOS_161 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
actttaaaaagtattttaaaattgtaaatagg	Protospacer
* ****** **** *********** *...

165. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021025 (Rhizobium sp. TAL182 plasmid pRetTAL182a, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cggctcggcggacgggaggcggccgaatgacg	Protospacer
   .* .*********** .***********

166. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

167. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

168. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

169. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

170. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

171. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013512 (Rhizobium sp. N1314 plasmid pRspN1314a, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cggctcggcggacgggaggcggccgaatgacg	Protospacer
   .* .*********** .***********

172. spacer 3.15|991268|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 9, identity: 0.719

attttgagcggacgggagctggccgaatgacc	CRISPR spacer
cagctaggcggacgggaggcggccgaatgacg	Protospacer
   .*..*********** .***********

173. spacer 3.19|991513|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.719

tcgtttctgggagcgggtctttccagtattgc	CRISPR spacer
gcatttctggcagcgggtctgtccagccagac	Protospacer
 *.******* ********* *****.   .*

174. spacer 3.21|991635|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 9, identity: 0.719

ctgctgggtcgtgtttgactcaacgctcccca	CRISPR spacer
cactccgagcgtctttgcctcaacgctcccca	Protospacer
*  .. *. *** **** **************

175. spacer 4.1|1008044|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.719

ccccacaaatcactggtcgatttcgtcgcacg	CRISPR spacer
atcgtgaaatcactggtcgatttgggcgctct	Protospacer
 .*   ***************** * *** *

176. spacer 4.1|1008044|32|CP030209|CRISPRCasFinder,CRT matches to MK016664 (Synechococcus phage S-B68, complete genome) position: , mismatch: 9, identity: 0.719

ccccacaaatcactggtcgatttcgtcgcacg	CRISPR spacer
gtcggcataccactggtcgatttcgtcgatag	Protospacer
 .* .** *.******************   *

177. spacer 4.15|1008898|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP031600 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence) position: , mismatch: 9, identity: 0.719

-attaaatacctggaaaaataccccaaaggggc	CRISPR spacer
cggctgaca-ctggcaaaatcccccaaaggggc	Protospacer
 . . .*.* **** ***** ************

178. spacer 4.23|1009387|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP031163 (Deinococcus wulumuqiensis strain NEB 479 plasmid pDrdI, complete sequence) position: , mismatch: 9, identity: 0.719

cccctattcctgatcatcgcgcatttggcggc	CRISPR spacer
gaccggcagctgatcatcgatcatttggcggc	Protospacer
  ** ..  **********  ***********

179. spacer 4.25|1009509|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaattacgttgcgaacagcgcggcgagagacg	CRISPR spacer
gaattgcgtcgcgaacagcgcggccgcctgct	Protospacer
*****.***.************** .   .*

180. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP039899 (Agrobacterium tumefaciens strain CFBP5877 plasmid pAtCFBP5877a, complete sequence) position: , mismatch: 9, identity: 0.719

ccatcaaagctgctgcgctggtggcataaccc	CRISPR spacer
cctctggcgctgctgcgctggtggcaagaccg	Protospacer
** .... ****************** .***

181. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP039890 (Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499a, complete sequence) position: , mismatch: 9, identity: 0.719

ccatcaaagctgctgcgctggtggcataaccc	CRISPR spacer
cctctggcgctgctgcgctggtggcaagaccg	Protospacer
** .... ****************** .***

182. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to NC_019514 (Erwinia phage vB_EamP-S6, complete genome) position: , mismatch: 9, identity: 0.719

ccatcaaagctgctgcgctggtggcataaccc	CRISPR spacer
cccgcaaagctgatgtgctggtggcattctgg	Protospacer
**  ******** **.***********  .

183. spacer 4.36|1010180|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP018781 (Ochrobactrum pituitosum strain AA2 plasmid pOAAA2, complete sequence) position: , mismatch: 9, identity: 0.719

ctcccaaacctctacagcgctaccaacaggaa	CRISPR spacer
atcgtaaacctctacagtgttaccaacaatgg	Protospacer
 ** .************.*.********. ..

184. spacer 4.40|1010425|32|CP030209|CRISPRCasFinder,CRT matches to AP014325 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S34-C6, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

gcagtactggctctaaatttaaaactggtcag	CRISPR spacer
tcgtaactggttctaactttaaaactggttca	Protospacer
 *.  *****.***** ************. .

185. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX009059 (Pseudomonas syringae pv. actinidiae strain RT685 plasmid pMG1_RT685, complete sequence) position: , mismatch: 10, identity: 0.688

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
ccggccctcattgccagagctggcgcgctctg	Protospacer
  ...* **** ***** ************

186. spacer 3.5|990656|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.688

aatttaaacagtaatttaaaattgttagcgtc	CRISPR spacer
ttcttaaaaagtaatttaaaagtgtttaggaa	Protospacer
  .***** ************ **** . *

187. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NC_019241 (Vibrio cincinnatiensis plasmid pVC, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

188. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MN719123 (Vibrio phage VALG_phi6, complete genome) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

189. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017895 (Vibrio phage K04M1_VK04M1, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
agcatctattacgacttgctgcctgactacac	Protospacer
*.  ** *********.********** . ..

190. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017906 (Vibrio phage K05K4_VK05K4_2, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

191. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017906 (Vibrio phage K05K4_VK05K4_2, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

192. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to MN690600 (Vibrio phage VALG_phi8, complete genome) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

193. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017905 (Vibrio phage K05K4_VK05K4_1, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

194. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017905 (Vibrio phage K05K4_VK05K4_1, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

195. spacer 3.14|991207|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to CP017905 (Vibrio phage K05K4_VK05K4_1, complete sequence) position: , mismatch: 10, identity: 0.688

aaattcaattacgactcgctgcctgacggggt	CRISPR spacer
atcatctattacgacttgctgcctgactacac	Protospacer
*   ** *********.********** . ..

196. spacer 4.16|1008959|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP011518 (Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence) position: , mismatch: 10, identity: 0.688

aaaaatagcgataacgcgccagatcgtgaggt	CRISPR spacer
ctcgatagcgacagcgcgccagatcgtccttt	Protospacer
   .*******.*.*************    *

197. spacer 4.16|1008959|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP010898 (Pandoraea vervacti strain NS15 plasmid pPV15, complete sequence) position: , mismatch: 10, identity: 0.688

aaaaatagcgataacgcgccagatcgtgaggt	CRISPR spacer
ctcgatagcgacagcgcgccagatcgtccttt	Protospacer
   .*******.*.*************    *

198. spacer 4.16|1008959|32|CP030209|CRISPRCasFinder,CRT matches to MN434096 (Klebsiella phage JIPh_Kp127, complete genome) position: , mismatch: 10, identity: 0.688

aaaaatagcgataacgcgccagatcgtgaggt	CRISPR spacer
ccagccagcgagaaagcgccagatcgtgatta	Protospacer
  *. .***** ** **************

199. spacer 4.16|1008959|32|CP030209|CRISPRCasFinder,CRT matches to MK630230 (Klebsiella phage Spivey, complete genome) position: , mismatch: 10, identity: 0.688

aaaaatagcgataacgcgccagatcgtgaggt	CRISPR spacer
ccagccagcgagaaagcgccagatcgtgatta	Protospacer
  *. .***** ** **************

200. spacer 4.16|1008959|32|CP030209|CRISPRCasFinder,CRT matches to MG459987 (Klebsiella phage Sugarland, complete genome) position: , mismatch: 10, identity: 0.688

aaaaatagcgataacgcgccagatcgtgaggt	CRISPR spacer
ccagccagcgagaaagcgccagatcgtgatta	Protospacer
  *. .***** ** **************

201. spacer 4.32|1009936|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 10, identity: 0.688

ccatcaaagctgctgcgctggtggcataaccc	CRISPR spacer
tcatcatcgctgctgcgctggtggtcgcgctg	Protospacer
.*****  ****************.   .*.

202. spacer 4.35|1010119|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP053812 (Vibrio cholerae strain W6G plasmid pW6G, complete sequence) position: , mismatch: 10, identity: 0.688

ccgtggaaagaaccagagcgttggttattggt	CRISPR spacer
ttgtggaaagaaccagagcattgattggccac	Protospacer
..*****************.***.**. . ..

203. spacer 4.35|1010119|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP053815 (Vibrio cholerae strain W7G plasmid pW7G, complete sequence) position: , mismatch: 10, identity: 0.688

ccgtggaaagaaccagagcgttggttattggt	CRISPR spacer
ttgtggaaagaaccagagcattgattggccac	Protospacer
..*****************.***.**. . ..

204. spacer 4.42|1010547|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tctcgacgccagatttaatattaattcccgca	CRISPR spacer
gggaagcatcagatttaataatgattcccgca	Protospacer
    ..*..*********** *.*********

205. spacer 4.44|1010669|32|CP030209|CRISPRCasFinder,CRT matches to MK449011 (Streptococcus phage Javan92, complete genome) position: , mismatch: 10, identity: 0.688

gattgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
..*.****************** * **  ..

206. spacer 4.44|1010669|32|CP030209|CRISPRCasFinder,CRT matches to MK448835 (Streptococcus phage Javan93, complete genome) position: , mismatch: 10, identity: 0.688

gattgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
..*.****************** * **  ..

207. spacer 4.44|1010669|32|CP030209|CRISPRCasFinder,CRT matches to MK448836 (Streptococcus phage Javan95, complete genome) position: , mismatch: 10, identity: 0.688

gattgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
..*.****************** * **  ..

208. spacer 4.44|1010669|32|CP030209|CRISPRCasFinder,CRT matches to MK448825 (Streptococcus phage Javan639, complete genome) position: , mismatch: 10, identity: 0.688

gattgctcagattgggaatttgaccagcgacc	CRISPR spacer
agtcgctcagattgggaatttgtcaagatgta	Protospacer
..*.****************** * **  ..

209. spacer 4.48|1010914|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gccgtgaacgcgtcgcccgcttttttgtagca	CRISPR spacer
cgcgtgatcgcgtagcccgcttttttaatatt	Protospacer
  ***** ***** ************.  ..

210. spacer 3.2|990473|32|CP030209|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 11, identity: 0.656

aaaatcatcatggccagcgctggcgcgctcgc	CRISPR spacer
cgcccgatcagcgccagcgctggcgcgctgtt	Protospacer
 .  . ****  *****************  .

211. spacer 4.12|1008715|32|CP030209|CRISPRCasFinder,CRT matches to MN508620 (UNVERIFIED: Pseudomonas phage E2005-24-39, complete genome) position: , mismatch: 11, identity: 0.656

gacattgcccgctgggatgcgcggcaactgga	CRISPR spacer
tgcattgcccacttggatgcgcggcgcgcctg	Protospacer
 .********.** ***********.  .  .

212. spacer 4.12|1008715|32|CP030209|CRISPRCasFinder,CRT matches to MN871454 (UNVERIFIED: Pseudomonas phage Pa-A, complete genome) position: , mismatch: 11, identity: 0.656

gacattgcccgctgggatgcgcggcaactgga	CRISPR spacer
tgcattgcccacttggatgcgcggcgcgcctg	Protospacer
 .********.** ***********.  .  .

213. spacer 4.12|1008715|32|CP030209|CRISPRCasFinder,CRT matches to LC472881 (Pseudomonas phage R12 DNA, complete genome) position: , mismatch: 11, identity: 0.656

gacattgcccgctgggatgcgcggcaactgga	CRISPR spacer
tgcattgcccacttggatgcgcggcgcgcctg	Protospacer
 .********.** ***********.  .  .

214. spacer 4.12|1008715|32|CP030209|CRISPRCasFinder,CRT matches to NC_026600 (Pseudomonas phage vB_PaeM_C1-14_Ab28, complete genome) position: , mismatch: 11, identity: 0.656

gacattgcccgctgggatgcgcggcaactgga	CRISPR spacer
tgcattgcccacttggatgcgcggcgcgcctg	Protospacer
 .********.** ***********.  .  .

215. spacer 4.13|1008776|32|CP030209|CRISPRCasFinder,CRT matches to MN693859 (Marine virus AFVG_250M1186, complete genome) position: , mismatch: 11, identity: 0.656

aattgcctttgctgcccggctcttctacggtc	CRISPR spacer
ggacacccttgccgcccggctcttctacccag	Protospacer
.. ..**.****.***************

216. spacer 4.26|1009570|32|CP030209|CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 11, identity: 0.656

cggattgcattcaataaacatgtaaataggaa	CRISPR spacer
gcatttgcattcaataaacttgttaatgtatc	Protospacer
  . *************** *** ***. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

672624 : 712391

Salmonella_phage(58.14%)

integrase,capsid,portal,head,holin,plate,lysis,tRNA,terminase,tail

attL 670992:671051|attR 702482:702582

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
670992:671051	attL	NA	NA	NA	NA
AXD51261.1\|672624_673638_-\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	6.5e-191	97.6
AXD51262.1\|673637_674213_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	3.4e-59	57.6
AXD51263.1\|674342_674606_+	hypothetical protein	A0A218M4I5	Erwinia_phage	2.0e-43	98.9
AXD51264.1\|674636_675146_+	hypothetical protein	A0A0M4QWN1	Salmonella_phage	1.1e-88	98.2
AXD51265.1\|675153_675381_+	DUF2724 domain-containing protein	A0A0M4RTI3	Salmonella_phage	2.1e-36	97.3
AXD51266.1\|675367_675568_+	hypothetical protein	A0A0M5M7U3	Salmonella_phage	2.3e-31	98.5
AXD51267.1\|675637_675865_+	DUF2732 domain-containing protein	A0A0M3UL87	Salmonella_phage	6.8e-32	100.0
AXD51268.1\|675864_676089_+	TraR/DksA family transcriptional regulator	Q6K1F5	Salmonella_virus	6.5e-35	100.0
AXD51269.1\|676085_676607_+	hypothetical protein	Q6K1F4	Salmonella_virus	1.2e-92	100.0
AXD51270.1\|676729_678949_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	94.4
AXD51271.1\|679066_679507_+	DinI family protein	A0A218M4I0	Erwinia_phage	2.6e-67	94.2
AXD51272.1\|679589_680321_+	hypothetical protein	Q37850	Escherichia_phage	9.1e-126	91.4
AXD51273.1\|680454_681252_+	hypothetical protein	NA	NA	NA	NA
AXD51274.1\|681306_681489_+	hypothetical protein	NA	NA	NA	NA
AXD51275.1\|681622_682669_-\|portal	phage portal protein	S4TNX7	Salmonella_phage	1.4e-188	98.3
AXD51276.1\|682668_684438_-	oxidoreductase	S4TT96	Salmonella_phage	0.0e+00	100.0
AXD51277.1\|684603_685458_+\|capsid	capsid scaffolding protein	S4TP53	Salmonella_phage	8.9e-157	98.6
AXD51278.1\|685533_686601_+\|capsid	phage major capsid protein, P2 family	O80304	Escherichia_phage	2.3e-178	89.5
AXD51279.1\|686604_687354_+\|terminase	terminase	Q6K1I5	Salmonella_virus	1.8e-113	88.0
AXD51280.1\|687447_687954_+\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	1.3e-91	100.0
AXD51281.1\|687953_688157_+\|tail	phage tail protein	S4TTA0	Salmonella_phage	8.8e-31	97.0
AXD51282.1\|688160_688457_+\|holin	holin	S4TP56	Salmonella_phage	1.3e-46	99.0
AXD51283.1\|688443_688941_+	lysozyme	S4TUB1	Salmonella_phage	5.8e-92	98.8
AXD51284.1\|688937_689351_+\|lysis	LysB family phage lysis regulatory protein	A0A0M4R2N5	Salmonella_phage	9.9e-45	97.1
AXD51285.1\|689322_689496_+\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	2.8e-25	98.2
AXD51286.1\|689458_689926_+\|tail	phage tail protein	S4TTA5	Salmonella_phage	7.2e-84	99.4
AXD51287.1\|689918_690368_+	phage virion morphogenesis protein	S4TP59	Salmonella_phage	4.2e-73	99.3
AXD51288.1\|690436_691078_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	9.1e-114	99.1
AXD51289.1\|691074_691422_+\|plate	baseplate assembly protein	S4TRW8	Salmonella_phage	2.5e-57	100.0
AXD51290.1\|691428_692337_+\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	2.6e-162	100.0
AXD51291.1\|692329_692860_+\|tail	phage tail protein I	S4TTA8	Salmonella_phage	9.2e-104	100.0
AXD51292.1\|692870_694964_+\|tail	phage tail protein	A0A1B0VFW4	Salmonella_phage	1.3e-222	95.8
AXD51293.1\|694933_695554_+\|tail	tail fiber assembly protein	A0A1B0VCD0	Salmonella_phage	3.0e-98	87.2
AXD51294.1\|695722_696910_+\|tail	phage tail protein	Q6K1H0	Salmonella_virus	3.8e-222	99.2
AXD51295.1\|696925_697444_+\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	6.5e-94	100.0
AXD51296.1\|697506_697842_+\|tail	phage tail assembly protein	A0A0M4S5P8	Salmonella_phage	1.8e-52	100.0
AXD51297.1\|697838_697994_+\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
AXD51298.1\|697986_700428_+\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	95.4
AXD51299.1\|700442_700928_+\|tail	phage tail protein	Q6K1G5	Salmonella_virus	1.0e-85	100.0
AXD51300.1\|700924_702094_+	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	1.1e-210	97.7
AXD51301.1\|702160_702379_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	9.5e-39	98.6
AXD51302.1\|702737_703244_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
702482:702582	attR	NA	NA	NA	NA
AXD51303.1\|703367_705350_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	9.0e-35	33.7
AXD51304.1\|705364_707107_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	8.1e-72	37.5
AXD51305.1\|707342_707558_-	30S ribosomal protein S21	NA	NA	NA	NA
AXD51306.1\|707785_708799_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-109	59.5
AXD51307.1\|708702_709041_-	hypothetical protein	NA	NA	NA	NA
AXD51308.1\|709048_709660_-	acyl-phosphate--glycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
AXD51309.1\|709766_710126_+	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
AXD51310.1\|710223_711045_+	undecaprenyl-diphosphatase	NA	NA	NA	NA
AXD51311.1\|711149_712391_-\|tRNA	multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase	A0A0F6YPT7	Sinorhizobium_phage	6.5e-92	47.9

DBSCAN-SWA_2

1458117 : 1495621

Enterobacteria_phage(44.44%)

protease,portal,head,holin,lysis,coat,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXD51981.1\|1458117_1459056_+\|protease	omptin family outer membrane protease PgtE	NA	NA	NA	NA
AXD51982.1\|1459077_1459308_-	hypothetical protein	C6ZR23	Salmonella_phage	7.5e-10	70.0
AXD51983.1\|1459317_1459521_-	hypothetical protein	C6ZR24	Salmonella_phage	2.7e-32	97.0
AXD51984.1\|1459831_1460098_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	3.7e-45	97.7
AXD51985.1\|1460174_1460912_-	DUF551 domain-containing protein	H6WRY2	Salmonella_phage	1.1e-59	50.7
AXD51986.1\|1460914_1461388_-	SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	2.8e-67	78.8
AXD51987.1\|1461870_1462230_-	Eaf protein	T1SA95	Salmonella_phage	2.5e-60	91.6
AXD51988.1\|1462774_1462945_-	DUF2737 family protein	I6S642	Salmonella_phage	6.1e-25	100.0
AXD51989.1\|1462961_1463276_-	hypothetical protein	K7PLT4	Enterobacteria_phage	1.1e-48	95.2
AXD51990.1\|1463287_1463770_-	hypothetical protein	K7P6T5	Enterobacteria_phage	5.5e-79	97.5
AXD51991.1\|1463753_1464656_-	DNA recombinase	K7PKG9	Enterobacteria_phage	2.6e-146	87.8
AXD51992.1\|1464652_1464961_-	hypothetical protein	K7PJM4	Enterobacteria_phage	7.3e-53	98.0
AXD51993.1\|1465045_1465198_-	host cell division inhibitory peptide Kil	A5VWA5	Enterobacteria_phage	1.1e-12	68.0
AXD51994.1\|1465182_1465317_-	hypothetical protein	K7PHK2	Enterobacteria_phage	1.4e-08	70.5
AXD51995.1\|1465649_1465928_-	hypothetical protein	C6ZR42	Salmonella_phage	1.3e-45	100.0
AXD51996.1\|1465961_1466621_-	pentapeptide repeat-containing protein	I6S1T3	Salmonella_phage	5.2e-48	85.3
AXD51997.1\|1466704_1466899_-	restriction endonuclease	E7C9Q6	Salmonella_phage	5.5e-30	98.4
AXD55124.1\|1466830_1467016_+	hypothetical protein	NA	NA	NA	NA
AXD51998.1\|1467238_1467574_-	hypothetical protein	Q5G8T5	Enterobacteria_phage	3.2e-46	86.0
AXD55125.1\|1468144_1468807_-	LexA family transcriptional regulator	A0A0M4QWY1	Salmonella_phage	1.7e-126	100.0
AXD51999.1\|1468925_1469141_+	XRE family transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
AXD52000.1\|1469251_1469533_+	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
AXD52001.1\|1469567_1469714_+	DUF2740 domain-containing protein	A0A0M4S617	Salmonella_phage	9.5e-19	95.8
AXD52002.1\|1469706_1470606_+	DNA replication protein	E7C9R4	Salmonella_phage	5.1e-155	99.0
AXD52003.1\|1470580_1472032_+	helicase DnaB	Q7Y2K5	Escherichia_phage	1.1e-276	99.4
AXD52004.1\|1472107_1472314_+	hypothetical protein	K7PMD7	Enterobacterial_phage	1.2e-30	97.1
AXD52005.1\|1472331_1472649_+	hypothetical protein	A0A2I6PIG0	Escherichia_phage	8.1e-55	97.1
AXD52006.1\|1472651_1472837_+	hypothetical protein	NA	NA	NA	NA
AXD52007.1\|1472848_1473259_+	recombination protein NinB	A0A0P0ZCW6	Stx2-converting_phage	3.2e-72	100.0
AXD52008.1\|1473255_1473432_+	NinE family protein	K7PHE6	Enterobacteria_phage	2.7e-28	100.0
AXD52009.1\|1473434_1473782_+	DUF2591 domain-containing protein	A5VW89	Enterobacteria_phage	4.4e-62	98.3
AXD52010.1\|1473774_1473951_+	protein ninF	Q76H71	Enterobacteria_phage	1.5e-26	98.3
AXD52011.1\|1473943_1474555_+	recombination protein NinG	A0A2D1GLP2	Escherichia_phage	1.0e-98	99.5
AXD52012.1\|1474551_1474758_+	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
AXD52013.1\|1474735_1475401_+	serine/threonine protein phosphatase	K7P7K6	Enterobacteria_phage	1.0e-131	99.5
AXD52014.1\|1475397_1476021_+	antitermination protein	A0A088CQ66	Enterobacteria_phage	4.4e-113	99.0
AXD55126.1\|1476445_1476784_+	Fis family transcriptional regulator	A0A1W6DXT8	Salmonella_phage	1.5e-22	49.1
AXD52015.1\|1477371_1477695_+\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	3.6e-50	96.3
AXD52016.1\|1477678_1478116_+	lysozyme	Q5G8R3	Enterobacteria_phage	4.1e-73	97.2
AXD52017.1\|1478112_1478574_+\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	4.5e-54	79.3
AXD52018.1\|1478723_1479329_+	Rha family transcriptional regulator	A0A1R3Y613	Salmonella_virus	4.4e-110	99.0
AXD52019.1\|1479556_1479799_+	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
AXD52020.1\|1479800_1479980_+	hypothetical protein	A0A2H4A350	Salmonella_phage	3.2e-24	96.6
AXD55127.1\|1480003_1480426_+	ubiquitin carboxyl-hydrolase	Q716H4	Shigella_phage	1.6e-74	99.3
AXD52021.1\|1480422_1481838_+\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	3.7e-277	99.4
AXD52022.1\|1481839_1484038_+\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	96.9
AXD52023.1\|1484128_1485022_+	scaffolding protein	A0A088CPT0	Enterobacteria_phage	2.0e-127	97.6
AXD52024.1\|1485040_1486294_+\|coat	coat protein	A0A088CQ56	Enterobacteria_phage	8.3e-236	99.3
AXD52025.1\|1486335_1486524_+	hypothetical protein	A0A088CPR7	Enterobacteria_phage	2.9e-28	100.0
AXD52026.1\|1486504_1486966_+\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
AXD52027.1\|1486975_1488394_+	hypothetical protein	I1TEJ1	Salmonella_phage	1.2e-270	96.8
AXD52028.1\|1488397_1489099_+\|tail	phage tail protein	C6ZR14	Salmonella_phage	4.7e-71	94.4
AXD52029.1\|1489098_1489554_+	DUF2824 family protein	E7C9U3	Salmonella_phage	5.2e-87	99.3
AXD52030.1\|1489556_1490246_+	DNA transfer protein	B9UDK9	Salmonella_phage	8.4e-89	97.2
AXD55128.1\|1490288_1491611_+	DNA transfer protein	A0A220NR03	Salmonella_phage	6.7e-228	94.5
AXD52031.1\|1491610_1493608_+	lytic transglycosylase domain-containing protein	Q76H13	Enterobacteria_phage	0.0e+00	86.6
AXD52032.1\|1493764_1495621_+\|tail	phage tail protein	I6S5Y0	Salmonella_phage	7.1e-58	83.6

DBSCAN-SWA_3

1739982 : 1749153

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXD52256.1\|1739982_1740930_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
AXD52257.1\|1740913_1741645_+	ABC transporter permease	NA	NA	NA	NA
AXD52258.1\|1741625_1741733_-	hypothetical protein	NA	NA	NA	NA
AXD52259.1\|1741792_1742524_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
AXD52260.1\|1742746_1744432_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
AXD52261.1\|1744428_1745148_+	DNA-binding response regulator	NA	NA	NA	NA
AXD52262.1\|1745194_1745662_+	DUF1456 domain-containing protein	Q9EYF4	Enterobacteria_phage	2.5e-73	89.7
AXD52263.1\|1745718_1746249_-	DUF1307 domain-containing protein	NA	NA	NA	NA
AXD52264.1\|1746420_1746879_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
AXD52265.1\|1747119_1749153_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1948117 : 1959433

Burkholderia_phage(25.0%)

integrase

attL 1938853:1938866|attR 1956409:1956422

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1938853:1938866	attL	NA	NA	NA	NA
AXD52442.1\|1948117_1949299_+	recombinase RecF	C7BGE8	Burkholderia_phage	2.4e-35	26.9
AXD52443.1\|1949299_1950046_+	HNH endonuclease	NA	NA	NA	NA
AXD52444.1\|1950147_1951404_-\|integrase	integrase	A0A077KET4	Ralstonia_phage	4.4e-80	41.8
AXD52445.1\|1951884_1952046_+	hypothetical protein	NA	NA	NA	NA
AXD52446.1\|1952172_1952592_+	protein UmuD	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
AXD52447.1\|1952594_1953863_+	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.2e-226	91.9
AXD52448.1\|1954308_1954521_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.5e-20	68.6
AXD55142.1\|1954531_1954720_+	cold-shock protein	NA	NA	NA	NA
AXD52449.1\|1954980_1956192_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	2.4e-107	55.5
AXD52450.1\|1956842_1957154_+	hypothetical protein	NA	NA	NA	NA
1956409:1956422	attR	NA	NA	NA	NA
AXD52451.1\|1957233_1957929_+	phosphohydrolase	S4W232	Pandoravirus	8.1e-07	27.5
AXD52452.1\|1958002_1959433_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP030210

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

35171 : 50063

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXD55290.1\|35171_35852_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.9e-32	36.5
AXD55291.1\|35844_37323_+	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.8e-27	31.0
AXD55292.1\|37559_37991_+	copper-binding protein	NA	NA	NA	NA
AXD55293.1\|38139_38490_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	2.4e-20	55.2
AXD55294.1\|38661_40488_-	OLD family endonuclease	E5E3R2	Burkholderia_phage	1.5e-12	23.2
AXD55295.1\|41095_42301_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.7e-206	90.5
AXD55296.1\|42297_43269_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	9.6e-115	68.9
AXD55297.1\|43413_44685_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	2.7e-157	64.2
AXD55298.1\|44684_45107_-	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AXD55299.1\|45286_45958_-	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	1.5e-79	59.5
AXD55300.1\|46309_46987_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.9e-29	37.4
AXD55301.1\|46986_47208_+	hypothetical protein	NA	NA	NA	NA
AXD55302.1\|47218_47638_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXD55303.1\|47691_48471_+	hypothetical protein	NA	NA	NA	NA
AXD55304.1\|48875_49382_+	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	3.7e-09	29.8
AXD55305.1\|49424_49616_+	hypothetical protein	NA	NA	NA	NA
AXD55306.1\|49802_50063_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.0e-11	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030209

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP030210

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection