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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030180 Salmonella enterica strain SA20100201 chromosome, complete genome 1 crisprs cas3,RT,csa3,DEDDh,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL 0 10 3 0

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1. CP030180
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030180_2 3988863-3989745 TypeI-E I-E
14 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 35964-35995 0 1.0
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NC_004313 Salmonella phage ST64B, complete genome 29636-29667 0 1.0
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 KU927493 Salmonella phage 118970_sal3, complete genome 27659-27690 0 1.0
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 KU927493 Salmonella phage 118970_sal3, complete genome 67247-67278 0 1.0
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 29636-29667 0 1.0
CP030180_2 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989502-3989533 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 20672-20703 0 1.0
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NZ_CP044185 Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403 12023-12054 0 1.0
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 10021-10052 1 0.969
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 39118-39149 1 0.969
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 113993-114024 1 0.969
CP030180_2 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989502-3989533 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 54231-54262 1 0.969
CP030180_2 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989502-3989533 32 NZ_CP054718 Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence 98931-98962 1 0.969
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_010392 Phage Gifsy-1, complete genome 11071-11102 1 0.969
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NZ_CP019281 Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence 29062-29093 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 AP012536 Stx2-converting phage Stx2a_1447 proviral DNA, complete genome 7521-7552 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 JQ182728 Enterobacteria phage mEp460, complete genome 33083-33114 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 KF030445 Escherichia phage 1720a-02, complete genome 38406-38437 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 MF807953 Escherichia phage Ayreon, complete genome 34508-34539 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NC_003444 Enterobacteria phage SfV, complete genome 27229-27260 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NC_049941 Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome 7521-7552 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 U82619 Shigella flexneri bacteriophage V, complete genome 27229-27260 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NC_009514 Phage cdtI DNA, complete genome 36103-36134 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 LR595862 Escherichia virus Lambda_2H10 genome assembly, chromosome: 1 34769-34800 5 0.844
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 MT225100 Escherichia phage Lys8385Vzw, complete genome 34228-34259 5 0.844
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 MN549360 Rhizobium phage RL38J1, complete genome 86105-86136 6 0.812
CP030180_2 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT 3988892-3988923 32 MH588547 Caulobacter phage CcrSC, complete genome 101522-101553 7 0.781
CP030180_2 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT 3988892-3988923 32 NC_048047 Caulobacter phage CcrBL9, complete genome 102162-102193 7 0.781
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 NZ_CP033246 Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence 152149-152180 7 0.781
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 NZ_CP033248 Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence 152189-152220 7 0.781
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 NZ_AP019717 Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence 509103-509134 7 0.781
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 104841-104872 7 0.781
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NC_021857 Shigella phage SfII, complete genome 30280-30311 7 0.781
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 KC814930 Shigella phage SfIV, complete genome 30081-30112 7 0.781
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 LR595868 Escherichia virus mEp460_4F5 genome assembly, chromosome: 1 32174-32205 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NZ_CP010141 Escherichia coli strain D3 plasmid A, complete sequence 171820-171851 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NZ_CP019281 Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence 10169-10200 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LT906558 Escherichia coli isolate E. coli RL465 genome assembly, plasmid: III 46120-46151 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LQ940956 Sequence 13 from Patent WO2014135838 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 HV030377 JP 2011056337-A/1: A method of operation for a chained molecule 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597642 Escherichia phage Evi genome assembly, chromosome: 1 37577-37608 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597653 Escherichia phage Lambda_ev066 genome assembly, chromosome: 1 16638-16669 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597644 Escherichia phage Lambda_ev087 genome assembly, chromosome: 1 16648-16679 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597652 Escherichia phage Lambda_ev110 genome assembly, chromosome: 1 16652-16683 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LG109818 KR 1020150126026-A/13: ENZYME STALLING METHOD 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595860 Escherichia virus Lambda_2E9 genome assembly, chromosome: 1 16662-16693 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 DD017402 METHOD FOR DETECTING NUCLEIC ACIDS 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 HZ164698 WO 2015111248-A/3: Method for Preparation of Unit DNA Composition and Method for Production of DNA-linked body 16652-16683 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595865 Escherichia virus Lambda_2G7a genome assembly, chromosome: 1 16662-16693 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595850 Escherichia virus Lambda_1H12 genome assembly, chromosome: 1 16663-16694 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_049952 Escherichia virus Lambda_2B8 genome assembly, chromosome: 1 16608-16639 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 JQ086376 Enterobacteria phage HK630, complete genome 16457-16488 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MC431151 JP 2019022513-A/3: Method for Preparation of Unit DNA Composition and Method for Production of DNA-linked body 16652-16683 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 KT232076 UNVERIFIED: Enterobacteria phage lambda, complete genome 11399-11430 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_001416 Enterobacteria phage lambda, complete genome 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_042057 Enterobacteria phage DE3, complete genome 36726-36757 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 CP025712 Escherichia phage YDC107_1 chromosome, complete genome 632-663 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MA017622 JP 2017536831-A/36: TARGETED ELIMINATION OF BACTERIAL GENES 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_019711 Enterobacteria phage HK629, complete genome 16457-16488 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597648 Escherichia phage Lambda_ev245 genome assembly, chromosome: 1 16661-16692 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MP278244 Sequence 3 from Patent EP3495482 16652-16683 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MH547045 Enterobacteria phage O276, complete genome 16647-16678 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597641 Escherichia phage mEp460_ev081 genome assembly, chromosome: 1 16086-16117 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 JQ182728 Enterobacteria phage mEp460, complete genome 16085-16116 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597639 Escherichia phage Lambda_ev243 genome assembly, chromosome: 1 16659-16690 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MN855675 Siphoviridae sp. isolate 61, complete genome 12151-12182 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 DJ347897 Method for preparation of artificial positive control DNAs used for multiplex PCR 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LP928576 Sequence 36 from Patent EP3224353 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_049953 Escherichia phage Lambda_ev099 genome assembly, chromosome: 1 16632-16663 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_049946 Escherichia virus Lambda_4A7 genome assembly, chromosome: 1 16549-16580 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LF148785 JP 2016510593-A/7: ENZYME STALLING METHOD 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MF374379 Escherichia phage DN1, complete genome 16646-16677 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 MF807953 Escherichia phage Ayreon, complete genome 16087-16118 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595861 Escherichia virus Lambda_4C10 genome assembly, chromosome: 1 16832-16863 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 NC_009514 Phage cdtI DNA, complete genome 16285-16316 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595862 Escherichia virus Lambda_2H10 genome assembly, chromosome: 1 17376-17407 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR595863 Escherichia virus Lambda_4B5 genome assembly, chromosome: 1 16662-16693 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597643 Escherichia phage Lambda_ev017 genome assembly, chromosome: 1 16916-16947 7 0.781
CP030180_2 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989563-3989594 32 LR597651 Escherichia phage Lambda_ev058 genome assembly, chromosome: 1 16617-16648 7 0.781
CP030180_2 2.4|3989075|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989075-3989106 32 JQ691611 Cronobacter phage CR9, complete genome 137514-137545 8 0.75
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 JQ182729 Enterobacterial phage mEp390, complete genome 29954-29985 8 0.75
CP030180_2 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT 3988892-3988923 32 NZ_CP049252 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence 5757-5788 9 0.719
CP030180_2 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT 3988892-3988923 32 HQ110084 Erwinia phage ENT90, complete genome 27362-27393 9 0.719
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 MN693586 Marine virus AFVG_25M48, complete genome 4001-4032 9 0.719
CP030180_2 2.6|3989197|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989197-3989228 32 NZ_CP024314 Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence 745638-745669 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_KR270450 Staphylococcus aureus strain SM31 plasmid pSM31, complete sequence 26258-26289 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP018769 Staphylococcus aureus subsp. aureus strain UCI 28 plasmid pUCI28, complete sequence 25211-25242 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP007658 Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence 6638-6669 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_LT671860 Staphylococcus aureus subsp. aureus isolate Clinical isolate plasmid II 25015-25046 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP022911 Staphylococcus aureus strain 164 plasmid pPS00089.1A.1, complete sequence 16453-16484 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029475 Staphylococcus aureus strain USA 100 isolate 30-47 plasmid unnamed, complete sequence 1139-1170 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030682 Staphylococcus aureus strain ER05857.3 plasmid unnamed1, complete sequence 9224-9255 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_KF831356 Staphylococcus aureus strain A960649 plasmid pBU108b, complete sequence 20415-20446 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030687 Staphylococcus aureus strain ER02919.3 plasmid unnamed1, complete sequence 24378-24409 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029659 Staphylococcus aureus strain AR_0467 plasmid unnamed1, complete sequence 5230-5261 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_018972 Staphylococcus aureus plasmid pWBG744, complete sequence 982-1013 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_019007 Staphylococcus aureus plasmid SAP048A, complete sequence 15240-15271 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_019008 Staphylococcus aureus plasmid SAP074A, complete sequence 1365-1396 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_019010 Staphylococcus aureus plasmid pSK67, complete sequence 24211-24242 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029679 Staphylococcus aureus strain AR_0215 plasmid unnamed1, complete sequence 21125-21156 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 LC377536 Staphylococcus aureus plasmid pNTUH_9448 NTUH_9448 DNA, complete sequence 1075-1106 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_018976 Staphylococcus aureus plasmid p19321-P03, complete sequence 25003-25034 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP007677 Staphylococcus aureus strain HUV05 plasmid pHUV05-01, complete sequence 16371-16402 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP007678 Staphylococcus aureus strain HUV05 plasmid pHUV05-02, complete sequence 15753-15784 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_LR130512 Staphylococcus aureus strain BPH2819 isolate BPH2819 plasmid 2 24782-24813 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029085 Staphylococcus aureus strain AR462 plasmid unnamed1, complete sequence 23304-23335 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029081 Staphylococcus aureus strain AR465 plasmid unnamed1, complete sequence 14783-14814 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP017683 Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence 22131-22162 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_013318 Staphylococcus aureus plasmid SAP012A, complete sequence 600-631 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_013335 Staphylococcus aureus plasmid SAP060A, complete sequence 14253-14284 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP053641 Staphylococcus aureus strain 14505 plasmid unnamed, complete sequence 24846-24877 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030472 Staphylococcus aureus strain ER01121.3 plasmid unnamed1, complete sequence 23430-23461 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047855 Staphylococcus aureus strain UP_1525 plasmid unnamed, complete sequence 24737-24768 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047860 Staphylococcus aureus strain UP_1405 plasmid unnamed, complete sequence 24846-24877 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047864 Staphylococcus aureus strain UP_1106 plasmid unnamed, complete sequence 24846-24877 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047862 Staphylococcus aureus strain UP_1322 plasmid unnamed, complete sequence 24845-24876 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP007455 Staphylococcus aureus strain 502A isolate RN6607 plasmid unnamed, complete sequence 5750-5781 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030500 Staphylococcus aureus strain ER02612.3 plasmid unnamed1, complete sequence 8136-8167 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030711 Staphylococcus aureus strain ER01174.3 plasmid unnamed2, complete sequence 13043-13074 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030691 Staphylococcus aureus strain ER01422.3 plasmid unnamed1, complete sequence 6107-6138 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047866 Staphylococcus aureus strain UP_844 plasmid unnamed, complete sequence 24844-24875 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047821 Staphylococcus aureus strain UP_1395 plasmid unnamed, complete sequence 25016-25047 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047818 Staphylococcus aureus strain UP_1433 plasmid unnamed1, complete sequence 24843-24874 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP010891 Staphylococcus aureus strain SA564 plasmid pSA564, complete sequence 18370-18401 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030627 Staphylococcus aureus strain ER01823.3 plasmid unnamed1, complete sequence 17872-17903 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP035792 Staphylococcus aureus strain 592 plasmid unnamed, complete sequence 24845-24876 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030543 Staphylococcus aureus strain ER04166.3 plasmid unnamed1, complete sequence 24377-24408 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP045867 Staphylococcus aureus strain CFSAN007894 plasmid pCFSAN007894, complete sequence 16012-16043 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 MK992500 Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence 41101-41132 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030594 Staphylococcus aureus strain ER03588.3 plasmid unnamed1, complete sequence 9228-9259 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 MK992499 Staphylococcus aureus strain 17Sau58 plasmid p17Sau58, complete sequence 35882-35913 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030423 Staphylococcus aureus strain ER02972.3 plasmid unnamed1, complete sequence 21307-21338 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029654 Staphylococcus aureus strain AR_0469 plasmid unnamed1, complete sequence 14805-14836 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP039163 Staphylococcus aureus strain Lr12 plasmid pLr12, complete sequence 3955-3986 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030504 Staphylococcus aureus strain ER04402.3 plasmid unnamed1, complete sequence 24377-24408 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030546 Staphylococcus aureus strain ER04181.3 plasmid unnamed1, complete sequence 13043-13074 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP047858 Staphylococcus aureus strain UP_1435 plasmid unnamed2, complete sequence 24846-24877 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP040561 Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence 35163-35194 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030440 Staphylococcus aureus strain ER02746.3 plasmid unnamed1, complete sequence 5569-5600 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030450 Staphylococcus aureus strain ER04225.3 plasmid unnamed1, complete sequence 5335-5366 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030392 Staphylococcus aureus strain ER04142.3 plasmid unnamed1, complete sequence 24377-24408 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030389 Staphylococcus aureus strain ER01689.3 plasmid unnamed1, complete sequence 22263-22294 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029672 Staphylococcus aureus strain AR_0220 plasmid unnamed1, complete sequence 8212-8243 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029662 Staphylococcus aureus strain AR_0228 plasmid unnamed2, complete sequence 18377-18408 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030589 Staphylococcus aureus strain ER04314.3 plasmid unnamed1, complete sequence 9225-9256 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029670 Staphylococcus aureus strain AR_0222 plasmid unnamed1, complete sequence 24157-24188 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NC_017344 Staphylococcus aureus subsp. aureus ECT-R 2 plasmid pLUH02, complete sequence 7318-7349 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP029656 Staphylococcus aureus strain AR_0468 plasmid unnamed1, complete sequence 21890-21921 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_CP053355 Staphylococcus aureus strain 14507 plasmid unnamed, complete sequence 18457-18488 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_MH785232 Staphylococcus aureus strain ch5 plasmid pLUH02, complete sequence 7309-7340 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_MH785250 Staphylococcus aureus strain ch3 plasmid pLUH02, complete sequence 7319-7350 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 NZ_MF622050 Staphylococcus aureus strain ST6 plasmid pSA564-fus, complete sequence 9991-10022 9 0.719
CP030180_2 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989258-3989289 32 CP030551 Staphylococcus aureus strain ER03481.3 plasmid unnamed1, complete sequence 24382-24413 9 0.719
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 NZ_CP030842 Acidisarcina polymorpha strain SBC82 plasmid pACPOL2, complete sequence 1940-1971 9 0.719
CP030180_2 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989319-3989350 32 KM389288 UNVERIFIED: Escherichia phage Phi06_2987 S clone contig00002 genomic sequence 11217-11248 9 0.719
CP030180_2 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989441-3989472 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 3928-3959 9 0.719
CP030180_2 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989502-3989533 32 LR811967 Salmonella phage Se_EM1 genome assembly, chromosome: 1 30511-30542 9 0.719
CP030180_2 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989136-3989167 32 NZ_CP010727 Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence 104653-104684 10 0.688
CP030180_2 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989441-3989472 32 NZ_CP014127 Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence 98255-98286 10 0.688
CP030180_2 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989441-3989472 32 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 45639-45670 10 0.688
CP030180_2 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989502-3989533 32 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 569076-569107 10 0.688
CP030180_2 2.9|3989380|32|CP030180|CRISPRCasFinder,CRT,PILER-CR 3989380-3989411 32 NZ_CP021119 Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence 36118-36149 11 0.656

1. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
tagtgcatccattgtttttactggaatttttg	Protospacer
********************************

2. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 0, identity: 1.0

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
taccgttaaactgttcatgcgttggttttctc	Protospacer
********************************

3. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 0, identity: 1.0

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
taccgttaaactgttcatgcgttggttttctc	Protospacer
********************************

4. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 0, identity: 1.0

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
taccgttaaactgttcatgcgttggttttctc	Protospacer
********************************

5. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 0, identity: 1.0

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
taccgttaaactgttcatgcgttggttttctc	Protospacer
********************************

6. spacer 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

tcgccgtacttgacgatcgttccggcaggcag	CRISPR spacer
tcgccgtacttgacgatcgttccggcaggcag	Protospacer
********************************

7. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
cgcactgaagctgtaacggaacggtgtaccct	Protospacer
********************************

8. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
tagcgcatccattgtttttactggaatttttg	Protospacer
***.****************************

9. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
tagcgcatccattgtttttactggaatttttg	Protospacer
***.****************************

10. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
tagcgcatccattgtttttactggaatttttg	Protospacer
***.****************************

11. spacer 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgccgtacttgacgatcgttccggcaggcag	CRISPR spacer
tcgccgtacttgactatcgttccggcaggcag	Protospacer
************** *****************

12. spacer 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgccgtacttgacgatcgttccggcaggcag	CRISPR spacer
tcgccgtacttgactatcgttccggcaggcag	Protospacer
************** *****************

13. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_010392 (Phage Gifsy-1, complete genome) position: , mismatch: 1, identity: 0.969

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
cgcactgaagctgtaacggaacggtgtgccct	Protospacer
***************************.****

14. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019281 (Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

15. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to AP012536 (Stx2-converting phage Stx2a_1447 proviral DNA, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

16. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to JQ182728 (Enterobacteria phage mEp460, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

17. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KF030445 (Escherichia phage 1720a-02, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

18. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MF807953 (Escherichia phage Ayreon, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

19. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_003444 (Enterobacteria phage SfV, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

20. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_049941 (Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

21. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to U82619 (Shigella flexneri bacteriophage V, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

22. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_009514 (Phage cdtI DNA, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

23. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595862 (Escherichia virus Lambda_2H10 genome assembly, chromosome: 1) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

24. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 5, identity: 0.844

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgccgttaaactgttcatgcgttagtttctcc	Protospacer
*.*********************.****...*

25. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MN549360 (Rhizobium phage RL38J1, complete genome) position: , mismatch: 6, identity: 0.812

atttcaagattgatagtggacattgtatttac-	CRISPR spacer
aggtcaagattgatagtggtcatcgt-ttaact	Protospacer
*  **************** ***.** ** ** 

26. spacer 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 7, identity: 0.781

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
gcaggcagcatcttcagcagcctgaccggcgg	Protospacer
*   .***.* *******************.*

27. spacer 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 7, identity: 0.781

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
gcgggcagcatcttcagcagcctgaccggcgg	Protospacer
*   .***.* *******************.*

28. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 7, identity: 0.781

atttcaagattgatagtggacattgtatttac	CRISPR spacer
attccttaattgatagtagacattgtatctat	Protospacer
***.*  .*********.**********.**.

29. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 7, identity: 0.781

atttcaagattgatagtggacattgtatttac	CRISPR spacer
attccttaattgatagtagacattgtatctat	Protospacer
***.*  .*********.**********.**.

30. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.781

atttcaagattgatagtggacattgtatttac	CRISPR spacer
attccttaattgatagtagacattgtatctat	Protospacer
***.*  .*********.**********.**.

31. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 7, identity: 0.781

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgttgttaaactgttcatgcgttagtttctcc	Protospacer
*...*******************.****...*

32. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_021857 (Shigella phage SfII, complete genome) position: , mismatch: 7, identity: 0.781

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgttgttaaactgttcatgcgttagtttctcc	Protospacer
*...*******************.****...*

33. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KC814930 (Shigella phage SfIV, complete genome) position: , mismatch: 7, identity: 0.781

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgttgttaaactgttcatgcgttagtttctcc	Protospacer
*...*******************.****...*

34. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595868 (Escherichia virus mEp460_4F5 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tgttgttaaactgttcatgcgttagtttctcc	Protospacer
*...*******************.****...*

35. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010141 (Escherichia coli strain D3 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

36. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019281 (Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

37. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LT906558 (Escherichia coli isolate E. coli RL465 genome assembly, plasmid: III) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

38. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LQ940956 (Sequence 13 from Patent WO2014135838) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

39. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to HV030377 (JP 2011056337-A/1: A method of operation for a chained molecule) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

40. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597642 (Escherichia phage Evi genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

41. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597653 (Escherichia phage Lambda_ev066 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

42. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597644 (Escherichia phage Lambda_ev087 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

43. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597652 (Escherichia phage Lambda_ev110 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

44. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LG109818 (KR 1020150126026-A/13: ENZYME STALLING METHOD) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

45. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595860 (Escherichia virus Lambda_2E9 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

46. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to DD017402 (METHOD FOR DETECTING NUCLEIC ACIDS) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

47. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to HZ164698 (WO 2015111248-A/3: Method for Preparation of Unit DNA Composition and Method for Production of DNA-linked body) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

48. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595865 (Escherichia virus Lambda_2G7a genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

49. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595850 (Escherichia virus Lambda_1H12 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

50. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_049952 (Escherichia virus Lambda_2B8 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

51. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to JQ086376 (Enterobacteria phage HK630, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

52. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MC431151 (JP 2019022513-A/3: Method for Preparation of Unit DNA Composition and Method for Production of DNA-linked body) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

53. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KT232076 (UNVERIFIED: Enterobacteria phage lambda, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

54. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_001416 (Enterobacteria phage lambda, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

55. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_042057 (Enterobacteria phage DE3, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

56. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP025712 (Escherichia phage YDC107_1 chromosome, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

57. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MA017622 (JP 2017536831-A/36: TARGETED ELIMINATION OF BACTERIAL GENES) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

58. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

59. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597648 (Escherichia phage Lambda_ev245 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

60. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MP278244 (Sequence 3 from Patent EP3495482) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

61. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MH547045 (Enterobacteria phage O276, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

62. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597641 (Escherichia phage mEp460_ev081 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

63. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to JQ182728 (Enterobacteria phage mEp460, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

64. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597639 (Escherichia phage Lambda_ev243 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

65. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MN855675 (Siphoviridae sp. isolate 61, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

66. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to DJ347897 (Method for preparation of artificial positive control DNAs used for multiplex PCR) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

67. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LP928576 (Sequence 36 from Patent EP3224353) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

68. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_049953 (Escherichia phage Lambda_ev099 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

69. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_049946 (Escherichia virus Lambda_4A7 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

70. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LF148785 (JP 2016510593-A/7: ENZYME STALLING METHOD) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

71. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

72. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MF807953 (Escherichia phage Ayreon, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

73. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595861 (Escherichia virus Lambda_4C10 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

74. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_009514 (Phage cdtI DNA, complete genome) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

75. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595862 (Escherichia virus Lambda_2H10 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

76. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR595863 (Escherichia virus Lambda_4B5 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

77. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597643 (Escherichia phage Lambda_ev017 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

78. spacer 2.12|3989563|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR597651 (Escherichia phage Lambda_ev058 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

cgcactgaagctgtaacggaacggtgtaccct	CRISPR spacer
ggcgctgaagctgtagcggaacggcgcgccat	Protospacer
 **.***********.********.*..** *

79. spacer 2.4|3989075|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to JQ691611 (Cronobacter phage CR9, complete genome) position: , mismatch: 8, identity: 0.75

gtccgtctgcgtaccctgattaacggctatta	CRISPR spacer
aaattcctgcgtaccctgattaacggcgagta	Protospacer
.  . .********************* * **

80. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 8, identity: 0.75

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tcggtttaaactgttcatgcgttagtttctcc	Protospacer
*    ******************.****...*

81. spacer 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT matches to NZ_CP049252 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
accttcgagaacttcagcatcctgaccgacag	Protospacer
. *. *.. ********** ********.***

82. spacer 2.1|3988892|32|CP030180|CRISPRCasFinder,CRT matches to HQ110084 (Erwinia phage ENT90, complete genome) position: , mismatch: 9, identity: 0.719

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
aaaggaataaacttccgcagcctgaccgacag	Protospacer
.*  . *  ****** ************.***

83. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MN693586 (Marine virus AFVG_25M48, complete genome) position: , mismatch: 9, identity: 0.719

atttcaagattgatagtggacattgtatttac	CRISPR spacer
atttctagattgatagtgaacatgccaccaag	Protospacer
***** ************.****  .*.. * 

84. spacer 2.6|3989197|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

tcctgacgcgatccaagactcatggcggatct	CRISPR spacer
tgctgacgcgatccatggctcatgggacggcc	Protospacer
* ************* *.******* . . *.

85. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KR270450 (Staphylococcus aureus strain SM31 plasmid pSM31, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

86. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018769 (Staphylococcus aureus subsp. aureus strain UCI 28 plasmid pUCI28, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

87. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007658 (Staphylococcus aureus strain V2200 plasmid pV2200, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

88. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LT671860 (Staphylococcus aureus subsp. aureus isolate Clinical isolate plasmid II) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

89. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022911 (Staphylococcus aureus strain 164 plasmid pPS00089.1A.1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

90. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029475 (Staphylococcus aureus strain USA 100 isolate 30-47 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

91. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030682 (Staphylococcus aureus strain ER05857.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

92. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KF831356 (Staphylococcus aureus strain A960649 plasmid pBU108b, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

93. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030687 (Staphylococcus aureus strain ER02919.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

94. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029659 (Staphylococcus aureus strain AR_0467 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

95. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_018972 (Staphylococcus aureus plasmid pWBG744, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

96. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_019007 (Staphylococcus aureus plasmid SAP048A, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

97. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_019008 (Staphylococcus aureus plasmid SAP074A, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

98. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_019010 (Staphylococcus aureus plasmid pSK67, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

99. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029679 (Staphylococcus aureus strain AR_0215 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

100. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LC377536 (Staphylococcus aureus plasmid pNTUH_9448 NTUH_9448 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

101. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_018976 (Staphylococcus aureus plasmid p19321-P03, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

102. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007677 (Staphylococcus aureus strain HUV05 plasmid pHUV05-01, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

103. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007678 (Staphylococcus aureus strain HUV05 plasmid pHUV05-02, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

104. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR130512 (Staphylococcus aureus strain BPH2819 isolate BPH2819 plasmid 2) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

105. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029085 (Staphylococcus aureus strain AR462 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

106. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029081 (Staphylococcus aureus strain AR465 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

107. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017683 (Staphylococcus aureus strain CFSAN007850 plasmid pCFSAN007850, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

108. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_013318 (Staphylococcus aureus plasmid SAP012A, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

109. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_013335 (Staphylococcus aureus plasmid SAP060A, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

110. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053641 (Staphylococcus aureus strain 14505 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

111. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030472 (Staphylococcus aureus strain ER01121.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

112. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047855 (Staphylococcus aureus strain UP_1525 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

113. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047860 (Staphylococcus aureus strain UP_1405 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

114. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047864 (Staphylococcus aureus strain UP_1106 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

115. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047862 (Staphylococcus aureus strain UP_1322 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

116. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007455 (Staphylococcus aureus strain 502A isolate RN6607 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

117. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030500 (Staphylococcus aureus strain ER02612.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

118. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030711 (Staphylococcus aureus strain ER01174.3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

119. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030691 (Staphylococcus aureus strain ER01422.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

120. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047866 (Staphylococcus aureus strain UP_844 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

121. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047821 (Staphylococcus aureus strain UP_1395 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

122. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047818 (Staphylococcus aureus strain UP_1433 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

123. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010891 (Staphylococcus aureus strain SA564 plasmid pSA564, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

124. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030627 (Staphylococcus aureus strain ER01823.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

125. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035792 (Staphylococcus aureus strain 592 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

126. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030543 (Staphylococcus aureus strain ER04166.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

127. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045867 (Staphylococcus aureus strain CFSAN007894 plasmid pCFSAN007894, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

128. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MK992500 (Staphylococcus aureus strain 5Sau489 plasmid p5Sau489, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

129. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030594 (Staphylococcus aureus strain ER03588.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

130. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to MK992499 (Staphylococcus aureus strain 17Sau58 plasmid p17Sau58, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

131. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030423 (Staphylococcus aureus strain ER02972.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

132. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029654 (Staphylococcus aureus strain AR_0469 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

133. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039163 (Staphylococcus aureus strain Lr12 plasmid pLr12, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

134. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030504 (Staphylococcus aureus strain ER04402.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

135. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030546 (Staphylococcus aureus strain ER04181.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

136. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047858 (Staphylococcus aureus strain UP_1435 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

137. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040561 (Staphylococcus aureus strain Col52-A5 plasmid pCOL52-A5, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

138. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030440 (Staphylococcus aureus strain ER02746.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

139. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030450 (Staphylococcus aureus strain ER04225.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

140. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030392 (Staphylococcus aureus strain ER04142.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

141. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030389 (Staphylococcus aureus strain ER01689.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

142. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029672 (Staphylococcus aureus strain AR_0220 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

143. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029662 (Staphylococcus aureus strain AR_0228 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

144. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030589 (Staphylococcus aureus strain ER04314.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

145. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029670 (Staphylococcus aureus strain AR_0222 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

146. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_017344 (Staphylococcus aureus subsp. aureus ECT-R 2 plasmid pLUH02, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

147. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029656 (Staphylococcus aureus strain AR_0468 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

148. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053355 (Staphylococcus aureus strain 14507 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

149. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH785232 (Staphylococcus aureus strain ch5 plasmid pLUH02, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

150. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH785250 (Staphylococcus aureus strain ch3 plasmid pLUH02, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

151. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF622050 (Staphylococcus aureus strain ST6 plasmid pSA564-fus, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

152. spacer 2.7|3989258|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to CP030551 (Staphylococcus aureus strain ER03481.3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagtgcatccattgtttttactggaatttttg	CRISPR spacer
caaaatagtcattgtttttgctgaaatttttg	Protospacer
.*. ..* .**********.***.********

153. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030842 (Acidisarcina polymorpha strain SBC82 plasmid pACPOL2, complete sequence) position: , mismatch: 9, identity: 0.719

taccgtt----aaactgttcatgcgttggttttctc	CRISPR spacer
----gctgagaaaactgtgcctgcgttggttttcca	Protospacer
    *.*    ******* * *************. 

154. spacer 2.8|3989319|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to KM389288 (UNVERIFIED: Escherichia phage Phi06_2987 S clone contig00002 genomic sequence) position: , mismatch: 9, identity: 0.719

taccgttaaactgttcatgcgttggttttctc	CRISPR spacer
tcggtttacactgttcatgcgttagtttctcc	Protospacer
*    *** **************.****...*

155. spacer 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 9, identity: 0.719

acgcggttgccgttttccccggttttttcctg	CRISPR spacer
tgccggttgccgttctctccggttttctgggg	Protospacer
   ***********.**.********.*   *

156. spacer 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to LR811967 (Salmonella phage Se_EM1 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

tcgccgtacttgacgatcgttccggcaggcag	CRISPR spacer
gctaaagaattgacggtcgttccggcagacag	Protospacer
 *   . * ******.************.***

157. spacer 2.5|3989136|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010727 (Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence) position: , mismatch: 10, identity: 0.688

atttcaagattgatagtggacattgtatttac	CRISPR spacer
tgtccacgatggatagtggacattgtaaggca	Protospacer
  *.** *** ****************     

158. spacer 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

acgcggttgccgttttccccggttttttcctg	CRISPR spacer
tgccggttgccgttctctccggttttctgggt	Protospacer
   ***********.**.********.*    

159. spacer 2.10|3989441|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 10, identity: 0.688

acgcggttgccgttttccccggttttttcctg	CRISPR spacer
tgccggttgccgttctctccggttttctgggt	Protospacer
   ***********.**.********.*    

160. spacer 2.11|3989502|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 10, identity: 0.688

tcgccgtacttgacgatcgttccggcaggcag	CRISPR spacer
gcgccgttcttgaccatcgttccgctgcccga	Protospacer
 ****** ****** ********* ..  *..

161. spacer 2.9|3989380|32|CP030180|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021119 (Streptomyces sp. CLI2509 strain CLI2905 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

cggaatgcccacgagagtaacgagccttttat	CRISPR spacer
ttcgattcccacgagagtagcgagcctcgccg	Protospacer
.  .** ************.*******. .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2022629 : 2071914 34 Shigella_phage(25.0%) plate,transposase,integrase attL 2035090:2035149|attR 2054071:2054150
DBSCAN-SWA_2 2864024 : 2949798 101 Enterobacteria_phage(24.32%) capsid,tail,lysis,holin,tRNA,head,portal,protease,terminase,integrase attL 2858793:2858807|attR 2947076:2947090
DBSCAN-SWA_3 3005425 : 3011036 9 Enterobacteria_phage(33.33%) lysis NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage