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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030223 Salmonella enterica strain SA20083039 chromosome, complete genome 2 crisprs PD-DExK,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,RT 1 11 5 0
CP030224 Salmonella enterica strain SA20083039 plasmid pSA20083039.1, complete sequence 0 crisprs csa3,DinG 0 0 14 0

Results visualization

1. CP030223
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030223_4 937412-937564 TypeI-E I-E
2 spacers
cas3,cas8e,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030223_5 953689-954670 TypeI-E I-E
14 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP030223_5 5.18|954324|26|CP030223|PILER-CR 954324-954349 26 CP030223.1 3465881-3465906 0 1.0

1. spacer 5.18|954324|26|CP030223|PILER-CR matches to position: 3465881-3465906, mismatch: 0, identity: 1.0

ccaactccttgggggaaaacggcttg	CRISPR spacer
ccaactccttgggggaaaacggcttg	Protospacer
**************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP044082 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence 90794-90823 6 0.8
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP024424 Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence 112052-112081 6 0.8
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 224971-225000 6 0.8
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 2052297-2052326 6 0.8
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 1727815-1727846 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 1732483-1732514 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1223603-1223634 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP033380 Escherichia coli strain L73 plasmid pL73-3, complete sequence 3770-3801 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP033801 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4 6836-6867 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 KM107845 Escherichia coli strain G5 plasmid pSYM9, complete sequence 6524-6555 6 0.812
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP034811 Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence 198364-198395 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 1727815-1727846 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 1732483-1732514 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 1223603-1223634 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP033380 Escherichia coli strain L73 plasmid pL73-3, complete sequence 3770-3801 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP033801 Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4 6836-6867 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 KM107845 Escherichia coli strain G5 plasmid pSYM9, complete sequence 6524-6555 6 0.812
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP034811 Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence 198364-198395 6 0.812
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP031080 Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence 271402-271431 7 0.767
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NZ_CP010861 Marinovum algicola DG 898 plasmid pMaD6, complete sequence 108890-108919 7 0.767
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 654402-654431 7 0.767
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_012657 Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence 4796-4827 7 0.781
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP031096 Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence 4158-4189 7 0.781
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_LR217714 Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio 10458-10489 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_LR217714 Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio 25574-25605 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013709 Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence 8272-8303 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013682 Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence 11837-11868 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013295 Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence 22553-22584 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013844 Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence 44436-44467 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_MK275623 Clostridium perfringens strain JXJA17 plasmid p5, complete sequence 27234-27265 8 0.75
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 MT787017 UNVERIFIED: Staphylococcus phage WV, complete genome 5044-5075 8 0.75
CP030223_5 5.14|954079|32|CP030223|CRISPRCasFinder,PILER-CR 954079-954110 32 NZ_LR723672 Rhizobium flavum strain YW14 plasmid 3 9076-9107 8 0.75
CP030223_5 5.17|954263|32|CP030223|PILER-CR 954263-954294 32 CP011833 Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence 2088-2119 8 0.75
CP030223_5 5.17|954263|32|CP030223|PILER-CR 954263-954294 32 CP017693 Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence 19797-19828 8 0.75
CP030223_5 5.17|954263|32|CP030223|PILER-CR 954263-954294 32 MN693285 Marine virus AFVG_25M368, complete genome 1786-1817 8 0.75
CP030223_5 5.17|954263|32|CP030223|PILER-CR 954263-954294 32 MK448920 Streptococcus phage Javan372, complete genome 12534-12565 8 0.75
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP032704 Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence 110025-110056 8 0.75
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 894508-894539 8 0.75
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NC_006362 Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence 142918-142949 8 0.75
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP040765 Paracoccus sp. 2251 plasmid unnamed1, complete sequence 17283-17314 8 0.75
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP032704 Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence 110025-110056 8 0.75
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 894508-894539 8 0.75
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NC_006362 Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence 142918-142949 8 0.75
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP040765 Paracoccus sp. 2251 plasmid unnamed1, complete sequence 17283-17314 8 0.75
CP030223_4 4.1|937443|30|CP030223|CRISPRCasFinder 937443-937472 30 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 343729-343758 9 0.7
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 AB853331 Staphylococcus phage S25-4 DNA, complete genome 130762-130793 9 0.719
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_022920 Staphylococcus phage S25-3 DNA, complete genome 137194-137225 9 0.719
CP030223_5 5.14|954079|32|CP030223|CRISPRCasFinder,PILER-CR 954079-954110 32 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 405364-405395 9 0.719
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP020444 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence 11237-11268 9 0.719
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 CP043032 Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence 52320-52351 9 0.719
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NC_023498 Mycobacterium phage Validus, complete genome 22810-22841 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP011121 Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence 147570-147601 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 371335-371366 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP023658 Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence 79558-79589 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP030872 Acetobacter sp. JWB plasmid unnamed1, complete sequence 80406-80437 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP021511 Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence 1685-1716 9 0.719
CP030223_5 5.22|954562|32|CP030223|PILER-CR 954562-954593 32 NZ_CP039847 Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence 17724-17755 9 0.719
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP020444 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence 11237-11268 9 0.719
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 CP043032 Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence 52320-52351 9 0.719
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NC_023498 Mycobacterium phage Validus, complete genome 22810-22841 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP011121 Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence 147570-147601 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 371335-371366 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP023658 Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence 79558-79589 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP030872 Acetobacter sp. JWB plasmid unnamed1, complete sequence 80406-80437 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP021511 Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence 1685-1716 9 0.719
CP030223_5 5.26|954548|32|CP030223|CRISPRCasFinder,CRT 954548-954579 32 NZ_CP039847 Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence 17724-17755 9 0.719
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 MN045228 Staphylococcus phage Maine, complete genome 39880-39911 10 0.688
CP030223_5 5.15|954140|32|CP030223|CRISPRCasFinder,PILER-CR 954140-954171 32 NZ_CP040096 Pantoea sp. SO10 plasmid unnamed1, complete sequence 721670-721701 10 0.688
CP030223_5 5.17|954263|32|CP030223|PILER-CR 954263-954294 32 NZ_CP024793 Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence 682125-682156 10 0.688
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NZ_CP009882 Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence 31368-31399 10 0.688
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 CP054930 Streptomyces sp. NA00687 plasmid unnamed, complete sequence 23432-23463 10 0.688
CP030223_5 5.19|954379|32|CP030223|PILER-CR 954379-954410 32 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 1332513-1332544 10 0.688
CP030223_5 5.20|954440|32|CP030223|PILER-CR 954440-954471 32 MH538193 Bacillus phage Saddex, complete genome 117278-117309 10 0.688
CP030223_5 5.20|954440|32|CP030223|PILER-CR 954440-954471 32 MG763894 Bacillus phage HonestAbe, complete genome 116177-116208 10 0.688
CP030223_5 5.20|954440|32|CP030223|PILER-CR 954440-954471 32 NC_031116 Bacillus phage Zuko, complete genome 116979-117010 10 0.688
CP030223_5 5.20|954440|32|CP030223|PILER-CR 954440-954471 32 MN694235 Marine virus AFVG_250M703, complete genome 23680-23711 10 0.688
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NZ_CP009882 Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence 31368-31399 10 0.688
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 CP054930 Streptomyces sp. NA00687 plasmid unnamed, complete sequence 23432-23463 10 0.688
CP030223_5 5.23|954365|32|CP030223|CRISPRCasFinder,CRT 954365-954396 32 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 1332513-1332544 10 0.688
CP030223_5 5.24|954426|32|CP030223|CRISPRCasFinder,CRT 954426-954457 32 MH538193 Bacillus phage Saddex, complete genome 117278-117309 10 0.688
CP030223_5 5.24|954426|32|CP030223|CRISPRCasFinder,CRT 954426-954457 32 MG763894 Bacillus phage HonestAbe, complete genome 116177-116208 10 0.688
CP030223_5 5.24|954426|32|CP030223|CRISPRCasFinder,CRT 954426-954457 32 NC_031116 Bacillus phage Zuko, complete genome 116979-117010 10 0.688
CP030223_5 5.24|954426|32|CP030223|CRISPRCasFinder,CRT 954426-954457 32 MN694235 Marine virus AFVG_250M703, complete genome 23680-23711 10 0.688
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_010371 Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence 8998-9029 11 0.656
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP019175 Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence 92725-92756 15 0.531
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP014152 Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence 216290-216321 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP006909 Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence 43663-43694 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013684 Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence 185477-185508 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013710 Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence 63064-63095 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_010418 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence 239807-239838 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP013700 Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence 251147-251178 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_025146 Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111 163536-163567 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NC_012654 Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence 193647-193678 16 0.5
CP030223_5 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR 954018-954049 32 NZ_CP031095 Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence 188505-188536 16 0.5

1. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
gagatcgcgctggcggcctcatccgtgccg	Protospacer
*.**************.* *******  * 

2. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 6, identity: 0.8

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
gagatcgcgctggcggcctcatccgtgccg	Protospacer
*.**************.* *******  * 

3. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.8

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
gagatcgcgctggcggcctcatccgtgccg	Protospacer
*.**************.* *******  * 

4. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.8

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
cggctcgcgctcgcggtcgcatcctcggcc	Protospacer
 ** ******* ************ . ***

5. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcg-gacagtac	CRISPR spacer
cgcgaaacggcggctgcgctggcgcaatcgca-	Protospacer
******.***************** .*. *.* 

6. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcg-gacagtac	CRISPR spacer
cgcgaaacggcggctgcgctggcgcaatcgca-	Protospacer
******.***************** .*. *.* 

7. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcgga-cagtac	CRISPR spacer
gccgaagcggcggctgcccgggcggagcagga-	Protospacer
  *************** * ****** *** * 

8. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP033380 (Escherichia coli strain L73 plasmid pL73-3, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

9. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP033801 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

10. spacer 5.19|954379|32|CP030223|PILER-CR matches to KM107845 (Escherichia coli strain G5 plasmid pSYM9, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

11. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
tcgcg-cgcggcggctgcggtggcggtcagggc	Protospacer
 ****  ************ ****** *** .*

12. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcg-gacagtac	CRISPR spacer
cgcgaaacggcggctgcgctggcgcaatcgca-	Protospacer
******.***************** .*. *.* 

13. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcg-gacagtac	CRISPR spacer
cgcgaaacggcggctgcgctggcgcaatcgca-	Protospacer
******.***************** .*. *.* 

14. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcgga-cagtac	CRISPR spacer
gccgaagcggcggctgcccgggcggagcagga-	Protospacer
  *************** * ****** *** * 

15. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP033380 (Escherichia coli strain L73 plasmid pL73-3, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

16. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP033801 (Enterobacter roggenkampii strain FDAARGOS_523 plasmid unnamed4) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

17. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to KM107845 (Escherichia coli strain G5 plasmid pSYM9, complete sequence) position: , mismatch: 6, identity: 0.812

cgcgaagcggcggctgcgctggcggacagtac--	CRISPR spacer
cgtgacgcggcggctgcgctggcg--ctgttcaa	Protospacer
**.** ******************  * ** *  

18. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP034811 (Paracoccus sp. Arc7-R13 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
tcgcg-cgcggcggctgcggtggcggtcagggc	Protospacer
 ****  ************ ****** *** .*

19. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 7, identity: 0.767

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
cagatcgcgctggcggcctcatccgtgccg	Protospacer
 .**************.* *******  * 

20. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NZ_CP010861 (Marinovum algicola DG 898 plasmid pMaD6, complete sequence) position: , mismatch: 7, identity: 0.767

gggatcgcgctggcggtcgcatccgttgcc--	CRISPR spacer
tggatcgcgctcgcggtcgcat--gatggaga	Protospacer
 ********** **********  * **    

21. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.767

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
cggctcgcgctggcggtcgcttcctcggcg	Protospacer
 ** **************** *** . ** 

22. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_012657 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ2, complete sequence) position: , mismatch: 7, identity: 0.781

aatatatagttatatatatgttaaataaccta-	CRISPR spacer
aaaatatagttatatataagtt-attattatat	Protospacer
** *************** *** * ** . ** 

23. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP031096 (Clostridium botulinum strain CFSAN034200 plasmid p2_CDC51232, complete sequence) position: , mismatch: 7, identity: 0.781

aatatatagttatatatatgttaaataaccta-	CRISPR spacer
aaaatatagttatatataagtt-attattatat	Protospacer
** *************** *** * ** . ** 

24. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
aatatatatttatatatatgttatttttttga	Protospacer
******** **************  *  .. *

25. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_LR217714 (Candidatus Erwinia haradaeae strain ErCicurvipes isolate 3402 plasmid pBio) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
aatatatatttatatatatgttatttttttga	Protospacer
******** **************  *  .. *

26. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
atcataaagttttatatatgttaaatattttt	Protospacer
* .*** **** *************** ..* 

27. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
atcataaagttttatatatgttaaatattttt	Protospacer
* .*** **** *************** ..* 

28. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
atcataaagttttatatatgttaaatattttt	Protospacer
* .*** **** *************** ..* 

29. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
atcataaagttttatatatgttaaatattttt	Protospacer
* .*** **** *************** ..* 

30. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_MK275623 (Clostridium perfringens strain JXJA17 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.75

aatatatagttatatatatgttaaataaccta	CRISPR spacer
agattatagttatctaaatgttaaatatttta	Protospacer
*.  ********* ** ********** ..**

31. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to MT787017 (UNVERIFIED: Staphylococcus phage WV, complete genome) position: , mismatch: 8, identity: 0.75

aatat-atagttatatatatgttaaataaccta	CRISPR spacer
-ttacaataattataaatatgttaaataaaatc	Protospacer
  **. ***.***** *************  * 

32. spacer 5.14|954079|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_LR723672 (Rhizobium flavum strain YW14 plasmid 3) position: , mismatch: 8, identity: 0.75

cacatctccaaactggaacgcgccaacgctgc	CRISPR spacer
aggctctccaagcaggaacgcgccaacgatac	Protospacer
 .  *******.* ************** *.*

33. spacer 5.17|954263|32|CP030223|PILER-CR matches to CP011833 (Geobacillus sp. 12AMOR1 plasmid pGARCT, complete sequence) position: , mismatch: 8, identity: 0.75

ctattaatgcagattctaaaagaattgcagaa	CRISPR spacer
gcattcatgcagattctgaaagaattgtccga	Protospacer
 .*** ***********.*********.  .*

34. spacer 5.17|954263|32|CP030223|PILER-CR matches to CP017693 (Geobacillus lituanicus strain N-3 plasmid pLDW-3, complete sequence) position: , mismatch: 8, identity: 0.75

ctattaatgcagattctaaaagaattgcagaa	CRISPR spacer
gcattcatgcagattctgaaagaattgtccga	Protospacer
 .*** ***********.*********.  .*

35. spacer 5.17|954263|32|CP030223|PILER-CR matches to MN693285 (Marine virus AFVG_25M368, complete genome) position: , mismatch: 8, identity: 0.75

ctattaatgcagattctaaaagaattgcagaa	CRISPR spacer
atgctaatgcagattgcaaaagaattgcgaca	Protospacer
 *..*********** .***********.. *

36. spacer 5.17|954263|32|CP030223|PILER-CR matches to MK448920 (Streptococcus phage Javan372, complete genome) position: , mismatch: 8, identity: 0.75

ctattaatg-----cagattctaaaagaattgcagaa	CRISPR spacer
-----gatgaaagccatattctaaaagaatttcagaa	Protospacer
     .***     ** ************** *****

37. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gctgaagcggccgctgcgctggcggaaacgat	Protospacer
  .******** ************** *  *.

38. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac-	CRISPR spacer
gacgaagcggcgcttgcgctggcgg-cgcttcg	Protospacer
 .********** .*********** *. * * 

39. spacer 5.19|954379|32|CP030223|PILER-CR matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
accgccgcggcgggtgcgctggcggccagggc	Protospacer
  **  ******* *********** *** .*

40. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcga-agcggcggctgcgctggcggacagtac	CRISPR spacer
-gtaatagcggcggatgcggtggcggacattgt	Protospacer
 *..* ******** **** ********* *..

41. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP032704 (Pantoea dispersa strain DSM 32899 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gctgaagcggccgctgcgctggcggaaacgat	Protospacer
  .******** ************** *  *.

42. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac-	CRISPR spacer
gacgaagcggcgcttgcgctggcgg-cgcttcg	Protospacer
 .********** .*********** *. * * 

43. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
accgccgcggcgggtgcgctggcggccagggc	Protospacer
  **  ******* *********** *** .*

44. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcga-agcggcggctgcgctggcggacagtac	CRISPR spacer
-gtaatagcggcggatgcggtggcggacattgt	Protospacer
 *..* ******** **** ********* *..

45. spacer 4.1|937443|30|CP030223|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 9, identity: 0.7

gggatcgcgctggcggtcgcatccgttgcc	CRISPR spacer
gggatcgcggtggcggtcgcttcgaggaag	Protospacer
********* ********** ** .  .  

46. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to AB853331 (Staphylococcus phage S25-4 DNA, complete genome) position: , mismatch: 9, identity: 0.719

aatat-atagttatatatatgttaaataaccta	CRISPR spacer
-ttacaataattataaatatgttaaataaaaac	Protospacer
  **. ***.***** *************    

47. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_022920 (Staphylococcus phage S25-3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

aatat-atagttatatatatgttaaataaccta	CRISPR spacer
-ttacaataattataaatatgttaaataaaaac	Protospacer
  **. ***.***** *************    

48. spacer 5.14|954079|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.719

cacatctccaaactggaacgcgccaacgctgc	CRISPR spacer
tagacgaccaaactctaacgcgccaacgctat	Protospacer
.* *.  *******  **************..

49. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP020444 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcgacgcggcggatgcgctggcgcgcctggt	Protospacer
***** ******* ********** .*   ..

50. spacer 5.19|954379|32|CP030223|PILER-CR matches to CP043032 (Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcgaagcagtggctgcgctggccgccgaacg	Protospacer
********.*.************ * *..   

51. spacer 5.19|954379|32|CP030223|PILER-CR matches to NC_023498 (Mycobacterium phage Validus, complete genome) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
tcggcggcgacggctgcgctggcggtcagggc	Protospacer
.  * .***.*************** *** .*

52. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP011121 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

53. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.719

gccataccc-----acaacctccagacgcccaagccc	CRISPR spacer
-----attcgttggacaatctccagacgcccaatccc	Protospacer
     *..*     ****.************** ***

54. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP023658 (Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

55. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP030872 (Acetobacter sp. JWB plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

56. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP021511 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

57. spacer 5.22|954562|32|CP030223|PILER-CR matches to NZ_CP039847 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

58. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP020444 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcgacgcggcggatgcgctggcgcgcctggt	Protospacer
***** ******* ********** .*   ..

59. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to CP043032 (Dermacoccus abyssi strain HZAU 226 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcgaagcagtggctgcgctggccgccgaacg	Protospacer
********.*.************ * *..   

60. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NC_023498 (Mycobacterium phage Validus, complete genome) position: , mismatch: 9, identity: 0.719

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
tcggcggcgacggctgcgctggcggtcagggc	Protospacer
.  * .***.*************** *** .*

61. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP011121 (Acetobacter oryzifermentans strain SLV-7 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

62. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 9, identity: 0.719

gccataccc-----acaacctccagacgcccaagccc	CRISPR spacer
-----attcgttggacaatctccagacgcccaatccc	Protospacer
     *..*     ****.************** ***

63. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP023658 (Acetobacter pomorum strain BDGP5 plasmid pApBDGP5A, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

64. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP030872 (Acetobacter sp. JWB plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

65. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP021511 (Acetobacter pasteurianus subsp. pasteurianus strain SRCM101342 plasmid pAP1342-2, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

66. spacer 5.26|954548|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP039847 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence) position: , mismatch: 9, identity: 0.719

gccatacccacaacctccagacgcccaagccc	CRISPR spacer
gccatacccactacctacagacgtaacagggt	Protospacer
*********** **** ******.   **  .

67. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to MN045228 (Staphylococcus phage Maine, complete genome) position: , mismatch: 10, identity: 0.688

aatatatagttatatatatgttaaataaccta	CRISPR spacer
ctattatagttatatatatattaattactatt	Protospacer
    ***************.**** ** . * 

68. spacer 5.15|954140|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaaaactctaaatccagcacgattcgttgttt	CRISPR spacer
aaacactccaaatccagcacgattgtgggcag	Protospacer
.** ****.***************    *.  

69. spacer 5.17|954263|32|CP030223|PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 10, identity: 0.688

ctattaatgcagattctaaaagaattgcagaa	CRISPR spacer
atattaaagcagattctacaagaaaagttatc	Protospacer
 ****** ********** *****  *. .  

70. spacer 5.19|954379|32|CP030223|PILER-CR matches to NZ_CP009882 (Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcaaagcggcggcagcgctggcgattgcctg	Protospacer
***.********** *********. .. .  

71. spacer 5.19|954379|32|CP030223|PILER-CR matches to CP054930 (Streptomyces sp. NA00687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gacgcagcggcggctgtgctggcgggcgcggt	Protospacer
 .** ***********.********.*.  ..

72. spacer 5.19|954379|32|CP030223|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gacgaagaagcggctgcgctggcggtggggca	Protospacer
 .***** .****************  .*   

73. spacer 5.20|954440|32|CP030223|PILER-CR matches to MH538193 (Bacillus phage Saddex, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

74. spacer 5.20|954440|32|CP030223|PILER-CR matches to MG763894 (Bacillus phage HonestAbe, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

75. spacer 5.20|954440|32|CP030223|PILER-CR matches to NC_031116 (Bacillus phage Zuko, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

76. spacer 5.20|954440|32|CP030223|PILER-CR matches to MN694235 (Marine virus AFVG_250M703, complete genome) position: , mismatch: 10, identity: 0.688

----caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
attttataag----caactctcgatcctgctgatga	Protospacer
    .* .**    **********.*********  

77. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NZ_CP009882 (Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
cgcaaagcggcggcagcgctggcgattgcctg	Protospacer
***.********** *********. .. .  

78. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to CP054930 (Streptomyces sp. NA00687 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gacgcagcggcggctgtgctggcgggcgcggt	Protospacer
 .** ***********.********.*.  ..

79. spacer 5.23|954365|32|CP030223|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.688

cgcgaagcggcggctgcgctggcggacagtac	CRISPR spacer
gacgaagaagcggctgcgctggcggtggggca	Protospacer
 .***** .****************  .*   

80. spacer 5.24|954426|32|CP030223|CRISPRCasFinder,CRT matches to MH538193 (Bacillus phage Saddex, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

81. spacer 5.24|954426|32|CP030223|CRISPRCasFinder,CRT matches to MG763894 (Bacillus phage HonestAbe, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

82. spacer 5.24|954426|32|CP030223|CRISPRCasFinder,CRT matches to NC_031116 (Bacillus phage Zuko, complete genome) position: , mismatch: 10, identity: 0.688

caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
atcgaggaatcaactctcgaaccagctccagt	Protospacer
   ***************** ** ***    .

83. spacer 5.24|954426|32|CP030223|CRISPRCasFinder,CRT matches to MN694235 (Marine virus AFVG_250M703, complete genome) position: , mismatch: 10, identity: 0.688

----caggaggaatcaactctcgaccctgctgatcc	CRISPR spacer
attttataag----caactctcgatcctgctgatga	Protospacer
    .* .**    **********.*********  

84. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 11, identity: 0.656

aatatatagttatatatatgttaaataaccta	CRISPR spacer
gcacgatagttatataaatgttaactaagtgt	Protospacer
.    *********** ******* *** .  

85. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP019175 (Salmonella enterica subsp. enterica serovar Give strain CFSAN024229 plasmid pCFSAN024229, complete sequence) position: , mismatch: 15, identity: 0.531

----------aatatatagttatatatatgttaaataaccta	CRISPR spacer
cgcagctaataatatatatataattatatatt----------	Protospacer
          ********  **  *****.**          

86. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

87. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

88. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

89. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

90. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

91. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

92. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

93. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

94. spacer 5.13|954018|32|CP030223|CRISPRCasFinder,PILER-CR matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 16, identity: 0.5

--------------aatatatagttatatatatgttaaataaccta	CRISPR spacer
caacctccttaaaatatatataattatatata--------------	Protospacer
               *******.*********              

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1116847 : 1187419 74 Salmonella_phage(50.94%) holin,plate,lysis,transposase,head,terminase,integrase,capsid,tRNA,tail,portal attL 1122202:1122216|attR 1194735:1194749
DBSCAN-SWA_2 1679808 : 1688980 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_3 2155994 : 2162655 9 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_4 2638822 : 2643241 6 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_5 2804461 : 2849640 65 Salmonella_phage(43.14%) protease,lysis,transposase,terminase,head,integrase,tail attL 2806021:2806080|attR 2848482:2848559
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP030224
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 59835 55 Escherichia_phage(26.32%) transposase NA
DBSCAN-SWA_2 63391 : 64462 1 unidentified_phage(100.0%) NA NA
DBSCAN-SWA_3 74385 : 84647 12 Salmonella_phage(50.0%) transposase NA
DBSCAN-SWA_4 104639 : 111131 10 Acanthocystis_turfacea_Chlorella_virus(33.33%) transposase NA
DBSCAN-SWA_5 115688 : 116799 1 Leptospira_phage(100.0%) transposase NA
DBSCAN-SWA_6 121057 : 127641 7 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_7 152349 : 156961 4 Cronobacter_phage(33.33%) NA NA
DBSCAN-SWA_8 160777 : 161888 1 Leptospira_phage(100.0%) transposase NA
DBSCAN-SWA_9 187288 : 198406 18 Stx2-converting_phage(42.86%) transposase NA
DBSCAN-SWA_10 203076 : 203694 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_11 212890 : 213733 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_12 217612 : 227052 11 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_13 232080 : 233920 3 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_14 237518 : 245389 11 Salmonella_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage