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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP030247 Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_1, complete sequence 0 crisprs RT,csa3 0 0 0 0
CP030248 Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_2, complete sequence 0 crisprs NA 0 0 0 0
CP030249 Staphylococcus epidermidis strain CSF41498 plasmid pCSF41498_3, complete sequence 0 crisprs NA 0 0 0 0
CP030246 Staphylococcus epidermidis strain CSF41498 chromosome, complete genome 1 crisprs csa3,WYL,DEDDh,cas3,DinG 0 0 6 0

Results visualization

1. CP030246
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP030246_1 2220765-2220853 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1018345 : 1064801 40 Staphylococcus_phage(83.87%) integrase,tRNA attL 1008474:1008490|attR 1049476:1049492
DBSCAN-SWA_2 1773025 : 1781495 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_3 1813137 : 1858660 54 Bacillus_phage(33.33%) transposase,holin,tail,capsid,portal,integrase,protease,terminase,head attL 1811162:1811178|attR 1858404:1858420
DBSCAN-SWA_4 1872513 : 1877090 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 2003728 : 2018137 17 Staphylococcus_phage(53.33%) terminase,integrase attL 2010861:2010876|attR 2014556:2014571
DBSCAN-SWA_6 2068231 : 2078665 10 uncultured_Caudovirales_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage