CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP027306	Streptomyces atratus strain SCSIO_ZH16 chromosome, complete genome	3 crisprs	WYL,c2c9_V-U4,csa3,RT,DEDDh,cas4,Cas9_archaeal,cas3,Cas14u_CAS-V,DinG	0	3	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP027306_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027306_3

2688514-2688586

Orphan

Consensus_repeat	Method
GCTCTGGGTGCCGGACAGGTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027306_3

>merge|CP027306|3|2688514-2688586|CRISPRCasFinder
GCTCTGGGTGCCGGACAGGTCCTGGAGCGGTTCGCCCTGGAGCGCGGCCCGCTCTGGGTGCCGGGCAGGTCCT

>CP027306|3|3|2688514-2688586|CRISPRCasFinder
GCTCTGGGTGCCGGACAGGTCCT	GGAGCGGTTCGCCCTGGAGCGCGGCCC
GCTCTGGGTGCCGGGCAGGTCCT

Protein	Signature genes	Signature genes Name	Protein_function
CP027306.1\|AXE77577.1\|2696505_2698212_-\|glycosidase	unknown	unknown	gnl\|CDD\|200456
CP027306.1\|AXE82722.1\|2678040_2680149_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225272
CP027306.1\|AXE77583.1\|2705012_2706080_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP027306.1\|AXE77573.1\|2685248_2686154_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|378401
CP027306.1\|AXE77582.1\|2703380_2704655_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270454
CP027306.1\|AXE77581.1\|2702344_2703361_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
CP027306.1\|AXE82724.1\|2687331_2688054_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP027306.1\|AXE77569.1\|2677338_2677962_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|294013
CP027306.1\|AXE77571.1\|2681708_2682356_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|225107
CP027306.1\|AXE77578.1\|2698624_2699692_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
CP027306.1\|AXE77570.1\|2680455_2681724_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
CP027306.1\|AXE77574.1\|2686156_2687239_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|99782
CP027306.1\|AXE77585.1\|2707542_2710533_-\|bifunctional-glutamine-synthetase-adenylyltransferase/deadenyltransferase	unknown	unknown	gnl\|CDD\|237613
CP027306.1\|AXE77576.1\|2690808_2696121_-\|DUF3372-domain-containing-protein	unknown	unknown	gnl\|CDD\|273974
CP027306.1\|AXE77579.1\|2699676_2701353_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200471
CP027306.1\|AXE77572.1\|2682718_2683177_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
CP027306.1\|AXE82723.1\|2683223_2685173_+\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE77584.1\|2706167_2707142_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379588
CP027306.1\|AXE82725.1\|2688066_2688405_-\|isomerase	unknown	unknown	gnl\|CDD\|238324
CP027306.1\|AXE77580.1\|2701454_2702348_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
CP027306.1\|AXE77577.1\|2696505_2698212_-\|glycosidase	gnl\|CDD\|200456	cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes AmyA proteins from bacteria, fungi, mammals, insects, mollusks, and nematodes. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	3.37107e-175
CP027306.1\|AXE82722.1\|2678040_2680149_-\|hypothetical-protein	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	2.21896e-61
CP027306.1\|AXE77583.1\|2705012_2706080_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.94128e-99
CP027306.1\|AXE77573.1\|2685248_2686154_+\|metal-dependent-hydrolase	gnl\|CDD\|378401	pfam10118, Metal_hydrol, Predicted metal-dependent hydrolase. Members of this family of proteins comprise various bacterial transition metal-dependent hydrolases.	1.48913e-94
CP027306.1\|AXE77582.1\|2703380_2704655_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270454	cd14751, PBP2_GacH, The periplasmic-binding component of the putative oligosacchride ABC transporter GacHFG; possesses type 2 periplasmic binding fold. This group represents the periplasmic component GacH of an ABC import system. GacH is identified as a maltose/maltodextrin-binding protein with a low affinity for acarbose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.4677e-156
CP027306.1\|AXE77581.1\|2702344_2703361_-\|ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.22851e-94
CP027306.1\|AXE82724.1\|2687331_2688054_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.26664e-14
CP027306.1\|AXE77569.1\|2677338_2677962_+\|transcriptional-regulator	gnl\|CDD\|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	7.98071e-35
CP027306.1\|AXE77571.1\|2681708_2682356_+\|DNA-binding-response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.83012e-38
CP027306.1\|AXE77578.1\|2698624_2699692_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	5.67197e-96
CP027306.1\|AXE77570.1\|2680455_2681724_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.1996e-39
CP027306.1\|AXE77574.1\|2686156_2687239_+\|oxidoreductase	gnl\|CDD\|99782	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster. PDR has an an N-terminal ferrredoxin reductase (FNR)-like NAD(H) binding domain and a C-terminal iron-sulfur [2Fe-2S] cluster domain. Although structurally homologous to FNR, PDR binds FMN rather than FAD in it's FNR-like domain. Electron transfer between pyrimidines and iron-sulfur clusters (Rieske center [2Fe-2S]) or heme groups is mediated by flavins in respiration, photosynthesis, and oxygenase systems. Type I dioxygenase systems, including the hydroxylate phthalate system, have 2 components, a monomeric reductase consisting of a flavin and a 2Fe-2S center and a multimeric oxygenase. In contrast to other Rieske dioxygenases the ferredoxin like domain is C-, not N-terminal.	2.94894e-91
CP027306.1\|AXE77585.1\|2707542_2710533_-\|bifunctional-glutamine-synthetase-adenylyltransferase/deadenyltransferase	gnl\|CDD\|237613	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase.	0
CP027306.1\|AXE77576.1\|2690808_2696121_-\|DUF3372-domain-containing-protein	gnl\|CDD\|273974	TIGR02103, pullulanase-like_protein_starch, alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
CP027306.1\|AXE77579.1\|2699676_2701353_-\|alpha-glucosidase	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
CP027306.1\|AXE77572.1\|2682718_2683177_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	6.46271e-14
CP027306.1\|AXE77584.1\|2706167_2707142_+\|hypothetical-protein	gnl\|CDD\|379588	pfam14378, PAP2_3, PAP2 superfamily.	4.93871e-47
CP027306.1\|AXE82725.1\|2688066_2688405_-\|isomerase	gnl\|CDD\|238324	cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) is a trimeric enzyme catalyzing the isomerization of the unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate. This is one step in the homoprotocatechuate pathway, one of the microbial meta-fission pathways that degrade aromatic carbon sources to citric acid cycle intermediates. Despite the structural similarity of CHMI with 4-oxalocrotonate tautomerase (4-OT) and macrophage migration inhibitory factor (MIF), there is no significant sequence similarity among these protein families, and therefore, they are not combined in one hierarchy.	2.83993e-23
CP027306.1\|AXE77580.1\|2701454_2702348_-\|ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.39917e-84

>CP027306.1|AXE82725.1|2688066_2688405_-|isomerase
MTVDYSAELDDSFDRRGFALALHPLVAETVTTKIAGCKTRFRRIEEFVAGDAATGDAVLNISIALLPGRTEELKAQLTDSVLELLAAHLKPVDVTVHASAETRDLDPSYRKR
>CP027306.1|AXE82724.1|2687331_2688054_+|TetR-family-transcriptional-regulator
MTTGVRRRMGVEERRQQLIGVALELFSHRSPDEVSIDEIAAAAGISRPLVYHYFPGKQSLYEAALRRAADELAARFVEPREGPLGARLLRVMGRFFDFVEEHGPGFSALMRGGPAVGSSTANAMIDGVRQAAYEQILAHLGVEGPPARLESVVRSWVSLAESTALIWLDGRRIPREELEMQLVHDFAALAAVSAAYNTEMAGIVLRVFAQEPADGPFGELLNRLSALAPAVPAVPGQRLP
>CP027306.1|AXE77574.1|2686156_2687239_+|oxidoreductase
MPLPLPRLRSVVLVAGAALLAKRAMRHRIENSPLWPLPALENPVSGHCDRGSTTTRRLLITERTAPADGVVQLRLEGPDLPAWQPGAHLDLLLPSGLVRQYSLCGNPADPDTYTIATRLVEEGRGGSREVHDRLHEGEEIEVRAPRNRFPLVEAPAYLFIAGGIGITPILPMLRSVAASGADWRLLYGGRSRATMPFLDGIEKLGSEGDRVTIVPGDEAGHPDTAAALADTAEGTAIYCCGPEPLMDAVTAALPPGRTLHLERFTAATTSSADSGPFEVELHRSGRTVQVAAGQSVLAAVREELSHVSYSCEQGFCGTCQQRVLEGEIDHRDELLTDSERDDSMLICVSRCRGERLVLDL
>CP027306.1|AXE77573.1|2685248_2686154_+|metal-dependent-hydrolase
MSNTQPAPVASQRTQLKARKVSFAWEKTPLHWVPGDPFATHTINVLHLLLPAGERWFIHVYRQVLPYIHDEQLRQDVIGFIGQEAVHSQAHDDVLPRLKQLGLDPTPYTAQVDWLFEKLLGDRTLPPGRARKWWLMERVATIAAIEHYTAFLGDWVLNADELDRRGADPTMLDLLRWHGAEEVEHRSVAFDVFMHVDGGYRRRVRTWAAAFAALLFLWQRGTRFFMENDPSLLHGKASFKEFYISGRRGTLPATGDLLRSIPRYLSHAYHPSQEGSTDQAVDYLAHSPAATAAEARMTGTS
>CP027306.1|AXE82723.1|2683223_2685173_+|hypothetical-protein
MRPLSEVPSAAAPADAKQAGAALVEHYPRLVRLGYLVLPPSLGCHRRVLTAHALAQRALLSGRSAGCVTEDRVPPPRRSAGAVVVDPSYAYVRGRVLHGALEAGRPLRRVRVTPLLPLVWGLRLFPHSGGSDELALEQALSTLSAPARAACVLRGLERLPDAEVRQVLAAAGVADPHAALAEAEDVSAPYALLDSPEFDPCSLQARPPDLLRRRQHTKAAVAAVAALLVCGALLGLPGNGWAGNDRGRGTGPGSPYTRNAAAEQALDPGALRRVSKTFWRRSPRTDFTAWPTRGDRAKDTRLLHRALTAWAHPDGAVRASATERTPVGPPMGAPQLLYAGEVDRATVVLFYDGLRIVRYAEPRDASPAGGVALDFARVDGADMASAGALIAGRTRDRVRYLTAPWVHAVSVRNLLAPGSAPRPLRRTPDGVTAALTSPATAGSCRAWDAIELRDDSATRLLTDLGELTPARLTSGPPSAAHDVSGRAERNSWARTACLLPSVRSHGVRSVNSWQYAEQLLPEDNGSAHWLCTRAETWRGTGSRVLAQFQAPSAPSAATGGPPGAVAARAEDTPACGMRDPRVLAGVLWKSHGGRWYVLAAGSEQFASLTTSGGVEGRSDSRLLAVPARAGDRARLNGTLTDGSRVGALR
>CP027306.1|AXE77572.1|2682718_2683177_-|MarR-family-transcriptional-regulator
MCDAPGHEPGARTSAGGGAGFELPLLLFHGHPDVRPAYGFALQAVGRDGATASEIGRRLGVSKQAAGKTVEKLEGLGYVERVDDPRDGRRKLVRLTARGIDVLVRSAEGFDRLRAEWVRVLGADRVRAMEADLRAMAPASAFRLDAAGWFND
>CP027306.1|AXE77571.1|2681708_2682356_+|DNA-binding-response-regulator
MRVVLAEDLFLLRDGLVRLLEAYDFEIAAAVETGPELTRALDELEPDVAVVDVRLPPSHTDEGLQCALAARQARPGLPVLVLSQHVEQLYARELLADGNGGIGYLLKDRVFDAEQFIDAVRRVAAGGTAMDPQVISQLLSRRSQDKPMGGLTPRELEVMELMAQGRSNAAIASQMVITERAVAKHTSNIFGKLGLPPSDDDNRRVLAVLAYLDRG
>CP027306.1|AXE77570.1|2680455_2681724_+|sensor-histidine-kinase
MNAIRARVQAALLAAGRGVVLSIASLAGSVTLFVWTVLSIVFIPLGIGLVTTPYVLELVRKHANRRRLLAVTWSDIRIPVPYRPFPKDLRTGFTGQVERTTLILKDPATWRDIRWLLVDMTAGYVVSILAGALLLYPVEGFVLAAGLWRVFTDDRYWYAFVPVDSQATGLAAAALGVVLFATGVLVSERLLRLHFVIARSVLAPTHEQELARRIDRLTETRHEAVDTAASELRRIERDLHDGAQARLVAMGMNLGTVEALIEKDPAQAKKLLAMARESSAEALTELRDLVRGIHPPVLAERGLGDAVRALALRLPFASQVRVELSGRADAAIESAAYFAVSETLTNTAKHSGADRVWVDIHHADAMLRVSVTDNGRGGAAVGSGSGLSGIERRLGTFDGIMAVSSPAGGPTMVTMEIPCELS
>CP027306.1|AXE82722.1|2678040_2680149_-|hypothetical-protein
MWSAHHRKTAILGWLLFVVLATGIGGASGLVEMTDSENAAGDSARAEQILDDAGLGQPAGELVMVSTAKAGDWQDVAREVSAAIGRTGEVANLAAPIPSEDGKDALITFDMKGDAATAPDRVQPVLDAVSAVRADHPDVTIHQFGEASAGKWLGDLLSEDFKKAEFTAVPLALGILLVAFGAVVAALLPVGLALTACMAAFGLLSLASHQLHLFQTTYSVMFLMGFAVGVDYCLFYLRRERDERAAGRDAETALRIAAATSGRAVLVSGLTVMVAMAGMFLSGLMLFKGFALATIIVVFIAMLGSVTVLPALLSWLGDRIDAGRVPFLNRRSSRRGNRRARASGGFAGTVLKPVLARPKIFAAASVVVLLALAAPALGMKTEQLGLEKQFGSDSPLSVSYRQINESFPGGPAPARVVVKADNIDTPALRKAFDGFDNVTVHKARNVAEIEVPLPDGKAELAELRKERLPAAFDGTGAQAYVTGEIAGSVDFNDQLKRGIVPVFAFITAVTFLLMLFCFRSYVIAVTSILLNLLSVAAAYGVMVAVFQHGWGASLIGSEGVGAIEAWIPLFVLVVLFGLSMDYHVFVVSRIREARDRGLHTRAAIDEGIRRTAGAVTGAAVIMVAVFAVFGTLSMQDMQQMGVGLAVAVLLDATIVRMILLPSVMALLGERNWRTPRALTRLPVLEHGEPETGEVPVGSGARG
>CP027306.1|AXE77569.1|2677338_2677962_+|transcriptional-regulator
MANTRTFSAAAAATAAPSATAAATTSARSLSPNRHRLRAVDPEEVVQSADVAEFLPPGATWLPAPQHTVPALPGRPPMIGYLVLVPADQQPAVTAAAAAAAQYVVQAPVEDPATTGPVRIDPVQRTAAVDGKTLDLTFLEFELLAHLVAHPHRVHTRDQLVTTVWGYGHVGDGRTVDVHVARLRRKLGTEHRRSIQTVRRVGYKYAP
>CP027306.1|AXE77576.1|2690808_2696121_-|DUF3372-domain-containing-protein
MSRTSLRRGVVAALCAALIPVVPAAATSAAPRPPGPPSDAALAAEPARHDLTREQFYFVMPDRFADGDTSNDRGGLTGSRLETGYDPTDKGFYQGGDLKGLTGRLDYIKGLGTTAIWLAPIFKNRPVQGTGKDASAGYHGYWITDFTQVDPHFGTNADLSKLIDKAHGKGMKVFFDVITNHTADTVDYAEKTYGYRPKGAYPYLDKDGRPFDDGKGLAKVDADSFPYTPKNTGNKVPAWLNDPTMYHNRGDSTYAGESTTYGDFSGLDDLWTERPEVVSGMEKIYEKWVRDFDIDGFRIDTVKHVDLDFWTQWATALDAYAAKHGRKDFFMFGEVYSADTAITSPYVTRGRLDATLDFPFQEAARQYASQGAPASKIAAVFGDDYRYTTDKANAYEQVTFLGNHDMGRIGSFLKQDNPKADDAELVKHAQLANELMFLSRGNPVVYYGDEQGFTGAGGDKDARQTMFASKTADYLDDDELGTDRTHAFDAYDTKHPLYRNIAALSELTRKNPALRNGVQTERHAEGPVYAFSRTEPEQGHEYVVATNNGSEARTVELPTASAGMNFRTIYGGSDLTRSGTDKKLTVTVPALSSVVLRAEKPLGTPAAKPSITLTAPAAGATGTVEISADVDGGSLNRVVFAAQTGNGKWVTLGSADHAPYKVTQTVGDSVPAGTPLRYKAVVVDRAGRTASAQASSTAGQAPAAEKPVAVERDYAVVHYKRADGDYDGHQVKSGDTTADFIGRDAYGAFAWIKLDEGTTSVPYTVEKSGTPDGPRRSIDLAKTGQVWIEQGKDGQADEAPDGAYPPQDTTKAVLHYYRADGDYDGWGLHTWTGAKDPTDWAKPLQPVKKDASGVTFEVPLTDGATSLSYILHKGDEKDLPSDQSLDIATYGHEVWMLGSTPGYLLPQTGGVPTPDLTRAEAQWIDSDTVVWKVKATEATSQQLVHASGGGISVVDGALSDEGQWLRLAPSALTDAQKAKYPHLKDYPAFTVDVRDRDRVREALRGQLIATQRAANGALLAATGVQSAGVLDDLYGKKAATASLGPVFDHGRPTLSVWAPTAQTVALELDGKSVPMRRDDRTGVWSVTGTAKWTGKPYRFVVKVWAPTVQKIVTNKVTDPYSTALTTDSARSLVVDLDDPGLAPKGWSGLEKPAAVPLRDAQIQELHIRDFSIADRTSKHPGEYLAFTDTRSDGMKHLEELADSGTSYVHLLPAFDIGTIPEKKSAQQKPACDLSVYAPDSEEQQACVAKAAAQDGFNWGYDPLHYTVPEGSYASDPNGTRRTVEFRQMVQGLNGAGLRTVMDVVYNHTVASGQDGKSVLDRIVPGYYQRLLEDGAVATSTCCANTAPENTMMGKLVVDSVVTWAKEYKVDGFRFDLMGHHPKANILAVRKALDALTVAKDGVDGKKIILYGEGWNFGEIADDARFVQATQKNMAGTGIATFSDRSRDAVRGGSPFDEDPGVQGFATGLYTDPNTSAANGTKADQKARLLHYQDLIKVGLTGNLAGYTFTDSSGNTVKGSGVDYNGAPAGYAAAPGDALAYADAHDNESLYDALAFKLPAGTSAADRARMQVLAMATATLSQGPSLSQAGSDLLRSKSLDRNSYDSGDWFNALHWDCRDGNGFGRGLPPAADNESKWSYARPLLSATALSPGCAQINGASAAYQDLLTIRSTEKDFDLSTTEQVQSALSFPLSGKDETPGVITMRLGKLVVVLNATPGTETQKIAGLAGQQYALHPIQAAGADSTVKESTYERSSGSFTVPGRTVAVFSLS
>CP027306.1|AXE77577.1|2696505_2698212_-|glycosidase
MARRPLSAALALIAGAAALVAPTTTAQASTPGDKDVTAVLFEWKFDSVAKACTDSLGPAGYGYVQVSPPQEHIQGGQWWTSYQPVSYRIAGRLGDRTSFADMVSTCHSAGVKVVADSVINHMSAGSGTGTGGSSYTKYNYPGVYSAADLDDCTAQISNYQDRANVQNCELVGLADLDTGEDYVRGRIAGYLNDLLSLGVDGFRIDAAKHMPAADLANIKSRLNNPGVYWKQEAIHGAGEAVSPDEYAGTGDVQEFRYARSLKQVFNNENLAHLKNFGEGWGFMPSSKAAVFVDNHDTERGGDTLNYKDGASYTLASVFMLAWPYGSPDVHSGYEWTDKDAGPPSGGTVNACYSDGWKCQHAWREISSMVGFRNTARGEAVTNWWDNGGDRIAFGRGSKAYVAINHEGSSLTRTFQTSLPAGDYCDIQSGNGVTVNGSGRFTATLGANTALALQVNARTCAGGGSTDPGTSTSGASFGVDATTQLGQNIYVTGNQAALGNWNTGSALKLDPATYPVWKLDVNMPAGTSFEYKYLRKDASGNVTWESGANRTATVPSFGKATLTSDVWRS
>CP027306.1|AXE77578.1|2698624_2699692_-|LacI-family-transcriptional-regulator
MVDGVTVPLPRSPGTGGAPRLSDIAGQAAVSEATVSRVLNGKPGVADTTRQRVLAALDILGYERPVRLRRRSAGLIGLVTPELINPIFPAFAQSVEQVLAGHGYTPVLCTQLPGGATEDELVEQLVERGVGGIVFLSGLHADMSADPARYAALTDRGVPFVLINGYNERISAPFVSPDDSAAVRMAVGHLADLGHRRVGLAIGPQRYVPSRRKREGFVEAAVNLLGLGRAEAELLVCSTLFSVEGGQVAAGALLEQGCTGIVCGSDLMALGVVRAARERGLDVPRDVSVVGFDDSQLIAFTDPPLTTVRQPVQAMAAAAVSALLEEIGGSPVQRTEYVFQPELVVRGSTAAVRGA
>CP027306.1|AXE77579.1|2699676_2701353_-|alpha-glucosidase
MTQHLAAPSTGTSDDAPGHRTGWWQDAVIYQVYPRSFADGNGDGMGDLAGVRDRLPYLKDLGVDAVWLSPFYASPQADAGYDVADYRAIDPMFGTLLDADALIRDAHDLGLRIIVDLVPNHSSDQHEWFRRALAEGPGSALRERYHFRPGKGADGELPPNDWESIFGGPAWTRTADPDGTPGDWYLHLFAPEQPDFNWEHPAVADEFRSILRFWLDMGVDGFRVDVAHGLVKAEGLPDLGTHDQLKLLGNDVMPFFDQDGVHEIYRSWRTILDEYPGERIAVAEAWTPTVERTANYVRPDEMHQAFNFQYLSTAWDAAELRKVIDTSLDAMRPVGAPTTWVLSNHDVTRHATRFANPPGLGTQIRDAGDRELGLRRARAATLLMLALPGSAYVYQGEELGLPDVTDLPDEVRQDPSFFRAEGQDGFRDGCRVPIPWTRDGSSYGFGTGGSWLPQPDSWGGLSVEAQTGDAGSTLELYRAAIAARRVHPGLGAGTVVEWLQAPEGLLIFARPGFVCTVNTTGRPVRIPVRGTVLLSSTPVAADGAEIELPADTTVWWTV
>CP027306.1|AXE77580.1|2701454_2702348_-|ABC-transporter-permease
MTTAPATTVPATSARHSARKVRLRGERSPIASVGLHLTLIVASVIAVFPVLWVLLTSLKPVAYATTTDFFKETTFENYTNLIQNTKFLTWFGNSLLIAGLTTLLGVIISASTGYAVSRFRFPGKRGLMWTLLITQMFPVAVLIVPIYNIMAGMGLLNQPAGLVITYLTISVPFCAWMMKGFFDTIPREIDESGQVDGLTPFGTFWRLILPLAKPGLAVTAFYSFITAWGEVAYASAFMVGEDNLTLAGGLQLFVNQYGAQWGPMTAASVLIAIPAALVFLFAQRHLVTGMSAGAVKG
>CP027306.1|AXE77581.1|2702344_2703361_-|ABC-transporter-permease
MAVHTSQSVAKAAGDDVARGRSRGTGNPPPPSRLRRALSTHWYAWTMVAPVVVVIGVIIGYPLVRGIYLSMTDANERNVERSIGVNHSPATYKFVGLDNYTEALTGNQFLGTLGWTLVWTVSCVAITFSLGMALANILNRRIAGRSAYRMALILPWAIPGFVSVFAWRFLYNEDRGLLNKILSGGGIDGIPWLNDPTWAKLSVIAVNVWLGVPFMMVALLGGLQSIPSEQYEAAEMDGATAWQRFRHITLPGLRPVSTTVILLSTIWTFNMFPVIYLLTRGGPGEATQILVTQAYKFSFEISPRDFAQSSTWGVLILVLLMIFAAVYRRVLRTQGDDW
>CP027306.1|AXE77582.1|2703380_2704655_-|sugar-ABC-transporter-substrate-binding-protein
MRRGITATALVAALALAATACGSDSESDGTSKGSGELSGTVTWWDTSTVGSEDKVFKKIAEDFTKQHPKVHIKYVNVPFGDAQNKFKNAAQSGSDAPDVIRSEVAWTPEFADLDYLAPLDGTAALQRPDDFLKQAAASTKYNGKTYAVPQVIDSMGIFYNKKIFKEAGVEVPQTIDELKTVSKKIKDKTGKTGMYLRGDDAYWFLSFLYGEGGDMVDASTKSVTIDNPEGVKAMKVVKDLVDSGAAKTDATDGWENMQSSFKDGKVAMMINGPWAVADTYAGKEFKDKANLGIAPVPAGSAAQGAPQGGHNLAVYAGSKNLDASYAFVDYMTSADTQAKVTKELSLLPTRTSAYAKQDVVDNEIVGFFKPVVETAVERPWIPETGSLFAPLVTEYTKVLTGQTAPEKAVKTTGDSYRKLLKGWK
>CP027306.1|AXE77583.1|2705012_2706080_+|LacI-family-transcriptional-regulator
MTARLADIATQAGVSEATVSRVLNGKPGVAAATRESVLAALDVLGYERPVRLRRRSAGLVGLITPELENPIFPALAQVIGQALTRQGYTPVLATQTPGGSTEDELTEMLVDRGVSGIIFVSGLHADTSADMQRYEQLRAQGVPFVLVNGFSPKVQAPFISPDDRAAMRLAVTHLVSLGHQRIGLAVGPKRFVPVLRKIEGFHSTVQEQLGLAPAEVEELIQHSLFTLEGGQAAASALMERGCTAVVCASDMMALGAIRAARRLSLEVPRDLSVVGYDDSPLIAFTDPPLTTIRQPVTAMGQAAVRTLLEEIGGTPAPHSEFVFMPELVVRGSTAAGPGPAPASTAGAFPGSHARS
>CP027306.1|AXE77584.1|2706167_2707142_+|hypothetical-protein
MGELSVTSQEGRPEATASPIVDEAAPTANARQNAGWQRGGPARLRSLRSPRRPRIWFEILLIAASYWVYSLVRNAVPEQKAEALHNADWIWSVETHLGIAVEQTVNHAVNSVTWLIVLMNYYYATLHFIVTVCVLVWLFHRHPGRYAAARLALFATTAVALLGYYLYPLAPPRLMNGGHFIDTVLVHQTWGSMASGNFKNMSNQYAAMPSMHIGWSLWCGLTIFALASAPWARILGLLYPALTLLVIVSTANHFWLDALGGMTCLAFGYAISYAWYGSLPHHLPKRVPLPRERSRPAGLSAGTPIRTQRPAKDAAARNSSPSGV
>CP027306.1|AXE77585.1|2707542_2710533_-|bifunctional-glutamine-synthetase-adenylyltransferase/deadenyltransferase
MTTVPGRRSSTFTRLLRHGFTDPSAAERLLDLPELSSVRSDPVLLDALGATADPDLALRGVVRLVEAEEPDERQVLLDTLVTAKPLRDRLLGVLGASEALGDHLARHPRDWHALVTYEATDLHPGVAEFEQGLAGADDPDSLRVAYRRCLLAIAARDVCGTTDVAEAAAELADLATATLRAALAIARTAVPSDAAQCRLAVIAMGKCGGHELNYVSDVDVIFVAEPVDGCEESAAVQAATRLAAHMMRICSDTTVEGTIWPVDANLRPEGRNGPLVRTLSSHLAYYQRWAKTWEFQALLKARPVAGDPELGAEYVEAVSPLVWQAADRENFVADVQKMRRRVVDNIPADRVEREIKLGPGGLRDVEFAVQLLQLVHGRSDATLHSGTTLEALRALAAGGYVGRVDAAQLDDAYRFLRAMEHRIQLYRLRRTHLVPEAESDLRRLGRSLGMRTDPITELGQAWKRHASVVRRLHEKLFYRPLLDAVAQLAPGESRLSAKAAVHRLEALGYADPAAALRHLEALSSGVSRKAAIQRTLLPVLLGWFADSADPDAGLLGFRKVSDALGKTPWYLRLLRDEGAAAENLARVLSAGRLAPDLLLRAPEAVAILGDPQGLKPRSREHLEQEVLAAVGRAEGAESAVAVVRGVRRRELFRTTAADLIGSYGTEERPAEEDPGALVDRVGNAVTDLNAVTIAGALRAAVREQWGDTLPTRFAVIGMGRFGGHELGYGSDADVLFVHSPREGVDEQEAGRAANQVVSEMRRLLQLPTADPPLIIDADLRPEGKSGPLVRTLRSYEAYYRRWSLVWESQALLRAEPMAGDEELGRDFIELIDPLRYPMEGLGEDAVREIRRLKARMESERLPRGADPTLHTKLGRGGLSDVEWTVQLMQMQHGWVEPGLRTTRTREALAAACAAELISGEDAQTLDEAWVLATRVRNAVMLVRGRPGDTFPSGPRELTAVGRYLGYEPGHVGDMLDDYRRITRRARAVVEERFYGA

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Crispr_ID: CP027306_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027306_4

2966365-2966469

Orphan

Consensus_repeat	Method
TGCTCTGCCAATTGAGCTACAGGGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027306_4

>merge|CP027306|4|2966365-2966469|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGATCGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGCTGCTCTGCCAATTGAGCTACAGGGGAT

>CP027306|4|4|2966365-2966469|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGAT	CGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC
TGCTCTGCCAATTGAGCTACAGGGGAT

Protein	Signature genes	Signature genes Name	Protein_function
CP027306.1\|AXE77772.1\|2955497_2957123_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225113
CP027306.1\|AXE82759.1\|2963301_2965086_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP027306.1\|AXE77773.1\|2957100_2957532_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
CP027306.1\|AXE82758.1\|2959165_2960551_+\|acyl-CoA-synthetase	unknown	unknown	gnl\|CDD\|236096
CP027306.1\|AXE77769.1\|2952892_2953645_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371045
CP027306.1\|AXE77770.1\|2953723_2954290_+\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE77778.1\|2967019_2968465_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
CP027306.1\|AXE77781.1\|2972452_2973547_-\|RNA-polymerase-subunit-sigma-70	unknown	unknown	gnl\|CDD\|235640
CP027306.1\|AXE82760.1\|2979319_2980117_-\|hydrolase	unknown	unknown	gnl\|CDD\|319818
CP027306.1\|AXE77771.1\|2954438_2955476_+\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|336482
CP027306.1\|AXE77783.1\|2975874_2977134_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
CP027306.1\|AXE77780.1\|2970367_2972299_+\|multidrug-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP027306.1\|AXE77784.1\|2977316_2978639_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
CP027306.1\|AXE77779.1\|2968634_2970368_+\|multidrug-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
CP027306.1\|AXE77782.1\|2973821_2975729_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
CP027306.1\|AXE77774.1\|2957669_2958878_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225133
CP027306.1\|AXE77785.1\|2978675_2978906_-\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE77776.1\|2961909_2963175_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
CP027306.1\|AXE77775.1\|2960543_2961905_+\|acetyl-CoA-carboxylase	unknown	unknown	gnl\|CDD\|223895
CP027306.1\|AXE77777.1\|2966649_2966949_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
CP027306.1\|AXE77772.1\|2955497_2957123_+\|histidine-kinase	gnl\|CDD\|225113	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms].	1.98995e-16
CP027306.1\|AXE82759.1\|2963301_2965086_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.43881e-154
CP027306.1\|AXE77773.1\|2957100_2957532_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	3.578e-31
CP027306.1\|AXE82758.1\|2959165_2960551_+\|acyl-CoA-synthetase	gnl\|CDD\|236096	PRK07787, PRK07787, acyl-CoA synthetase; Validated.	0
CP027306.1\|AXE77769.1\|2952892_2953645_-\|hypothetical-protein	gnl\|CDD\|371045	pfam10428, SOG2, RAM signalling pathway protein. SOG2 proteins in Saccharomyces cerevisiae are involved in cell separation and cytokinesis.	8.15486e-05
CP027306.1\|AXE77775.1\|2960543_2961905_+\|acetyl-CoA-carboxylase	gnl\|CDD\|223895	COG0825, AccA, Acetyl-CoA carboxylase alpha subunit [Lipid metabolism].	6.86216e-52
CP027306.1\|AXE77778.1\|2967019_2968465_+\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	4.2859e-118
CP027306.1\|AXE77781.1\|2972452_2973547_-\|RNA-polymerase-subunit-sigma-70	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	3.40437e-162
CP027306.1\|AXE82760.1\|2979319_2980117_-\|hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.77551e-61
CP027306.1\|AXE77771.1\|2954438_2955476_+\|rod-shape-determining-protein	gnl\|CDD\|336482	pfam06723, MreB_Mbl, MreB/Mbl protein. This family consists of bacterial MreB and Mbl proteins as well as two related archaeal sequences. MreB is known to be a rod shape-determining protein in bacteria and goes to make up the bacterial cytoskeleton. Genes coding for MreB/Mbl are only found in elongated bacteria, not in coccoid forms. It has been speculated that constituents of the eukaryotic cytoskeleton (tubulin, actin) may have evolved from prokaryotic precursor proteins closely related to today's bacterial proteins FtsZ and MreB/Mbl.	6.84623e-131
CP027306.1\|AXE77784.1\|2977316_2978639_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
CP027306.1\|AXE77780.1\|2970367_2972299_+\|multidrug-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
CP027306.1\|AXE77783.1\|2975874_2977134_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	6.4318e-73
CP027306.1\|AXE77782.1\|2973821_2975729_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
CP027306.1\|AXE77774.1\|2957669_2958878_+\|MFS-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	2.63533e-78
CP027306.1\|AXE77776.1\|2961909_2963175_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.53415e-70
CP027306.1\|AXE77779.1\|2968634_2970368_+\|multidrug-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.06942e-164

>CP027306.1|AXE82759.1|2963301_2965086_-|ABC-transporter-ATP-binding-protein
MAFRRFWPLTKGDRRWLILIFLCAVLAAIAETITVLLFAKLTDTALQTGSVSAFWKPAGQWVVVAVIGAVVGYLGNSLAAWVAERFVMRLRARVFSHLQTLPPHFYQRNRRGDLVERLTGDVEAIEALVVSGIVGAASALFGTLFYAAAALWLRWDLALATFVMVPLFWFTTTRFAGPLRAVSRRGRAADGAITAVVEETLVNVVMTQAYNRQQEEETRLLDKARIRLRTAVKAVRLTEFYEQLVEVLETLCVLAIIGLGAWEISAGRMTLGQLLAFAAFIGYLYPPIRSLGQLGLTATAATAGAERLLEILDAEPAVTDPAASVPAPPRNRALGEVEACQVTFHYPGSSEPVLRDLSFTASPGELLVITGPSGAGKSTLAALLLRFYDPDAGSVRLDGVSVDRLPLTYLRRNITLLPQDTLVLHDTIEENIGCGRTDVSHRDVVEAAKAADAHGFIGTLPEGYATVISSGTSRLSGGQLQRIAIARAMLRDAPVLLLDEPTTGLDRMAAQRILAPLRRLAEGRTTIVITHDLALAASADRILVLDEGRLVESGTHTQLLGRRGLYATLFERRAQQPHNGTVYSPARPSGIHWR
>CP027306.1|AXE77776.1|2961909_2963175_-|MFS-transporter
MTGTAEEPAHRTRILADLTPLRTSPDYRRLWFGNMVSWIGQGMTALAVSLQVYDITGSAFSVGLIGFCSFLPLVVFGLYGGAVADTIDRRKLGLAGSAGSFVLSVGLVAATVAGVEQVGLLYAIVALQAACFAVNSPARSSMIARLLPAEQLPAANALNSMTGTTGTLVGPMLGGIVVGWWGYRAAYTVDVITFTASLYAMWRLPSMLPEREEGAGGKRASVADGLRFLGTRPNLRMTFFTDLCAMVLAHPRALFPVVAVLWYGGDAKTTGLLVAAPALGALLGGVFSGWLGRIRRHGLAVLLAVASWGTAIAIFGLTRQLWLGLIFLALAGCADTTSMVFRNTMLQAAVPDEMRGRLQGVFIVVVAGGPRLGDFLAGSVADLASPGLAVTGGGIACVVAVSLLGLRWRGFARYDAKDPQP
>CP027306.1|AXE77775.1|2960543_2961905_+|acetyl-CoA-carboxylase
MRDRLTARAAIAALTTEFEELVESGVADHDTDGDGPLSWAGYADSRARAAARTGEEESVVHGLASVGGRSCVLVSFEFGFLGGSLGRRTGDLLEAAYEAARTRGLPLVSLIATGGSRMQEGMVALTQLQRVARASARLRAAGPAQLAVLRDPTTGGGWATLGAGADVILALPGAQVGFAGSRVRPADADPHAYTAEGQLAAGQIDAVVPPDELPETVARWLQALHTPGSPALGPAPVPDALSATGLPVTGWDAVRQARSPSRPRAEAYLDAYFDHRLPLGGDRCGGTDPGLRCGFGRRDGRTIAYVAQCGTATRPAGYRTAARVIRLADRLGVPVLTLIDTPGAANDAEAERAGAGAAIAGTFAAIAEARVPVTTLVIGEGGSGGALALAAPGNTYVTQDSYFSVIAPESAAAILKRTPDEVRATADQLRLRPQDLVELGIARAVVRPDPSED
>CP027306.1|AXE82758.1|2959165_2960551_+|acyl-CoA-synthetase
MTYDRLAAASTALAARLSGAGRVAVWATPTPETVVAVVAALRAGVPAVPLNPKTGTRELAHIVADSEPTVVLAGAGDVLPPVLDTLDRIDVDTTPDREGGGAALPEPSPESPALIVYTSGTTGPPKGAILPRRAIAASLDALEDAWQWTGDDVLVHALPLFHVHGLILGVLGPLRRGGSVRHLGRFSTGGVARELSSGGTMLFGVPTMYHRLAEALDGSAPGAAELAKALAGARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTGVRADGEPRPGTVGAPLRGVELRLVEEDGTVLTDPDAIGEIQVRGTNLFTGYLNRPDATAAALTEDGWFRTGDMATRDTDGYVRIVGRKATDLIKSGGYKIGAGEIENALLDHPGVHEAAVTGEPDPDLGERIVAWVVPADPASPPTKDELADHVAAQLSPHKRPRTVRYLDALPRNDLGKIMKRSLHA
>CP027306.1|AXE77774.1|2957669_2958878_+|MFS-transporter
MDTAVKQPPVPVGAPSAAARRNLVMATIGFGLTFWAWNLIAPMAGGYKERLGLNSFEQSLLVAVPVLVGSLGRIPVGALTDKHGARLMFPLISALTVVPVLLLIPAKNSYGAMLAVGFLLGLGGTTFAIGIPLVNSWFPPAGRGLALGVFGMGMGGVALSGYFTPRIAEHGDNLPFLVVAAALVAYAALAAVLVSDRPDRPVPTDSLAHRLGDAGRLRVTWELSALYAIGFGGIVAFGVYLPTYLKTWYDLSPTDAGTKAAGFALVTVVFRPIGGWLSDRIHPALVTAAALGLAALMAIVQAFDPELAPGGTIALLCMAAGLGTASGSVFALVSQVTPQAKVGSVTGIVGAMGGLGGFVPPLVMGAIYSAKGSYSIGFMLLSDLALAGCVYAYGRMRGLQRQ
>CP027306.1|AXE77773.1|2957100_2957532_-|Lrp/AsnC-family-transcriptional-regulator
MDRLDREILGILQEDARISYRDLGVRVGLSANAAADRVRRLRRDGVIRGFTVIIDPAADTRTGLVVFIDVSLRMDTTNEVFERAVLALPGITEVVHVTGGHDYLVRAAVADTAALDGLLRRLKREAGVAHSNTRVALRAAPAR
>CP027306.1|AXE77772.1|2955497_2957123_+|histidine-kinase
MTEDTANTSAANTAAGPPDEETAAASGTPQAPRLPMLLEAVLSVGTDLELRATLQQIVDTAAALTEARYGALGVLDTERGTISELFTSGLDDTERQRIGHLPDGHSGMLGVLIDEPEPLRSDDLTTDPRSCGIPPGHPPMHSFLGSPIRVQKQVFGNLYLTEKRTGHFTDADMALMRVLASQAGIAIGNARLYEAARQRERWIEGAAAVTTTLLTGENAVDALMTVAEGARVLADACAGVILQPNKEGGMEIVTASTLDDPAGIVGTTIEPGSALLVQLLGGEPVFIEDSATDPRMTTHVRTRFGPSMMLPLQSGGRLIGTLALPRRRGDRPYTAADRQLASQFASQAALALVLADAQHDREQLAVYEDRDRIAHDLHDLVVQRLFATEMMLESTRRRAAAPESDELLGKAVDELDSTIQEVRTAIFTLQQPPAEVPTTFRGRVLRETRGAAAVLGFQPSVHFDGAVDTLVRDPVDRRLLAALRSALATAHRRAGVSAIEVEVDATAVLPDGRAAVRLAVADDGRDEDGSRSPTFTWQAPL
>CP027306.1|AXE77771.1|2954438_2955476_+|rod-shape-determining-protein
MTVSLEQLRRCHVAVDLGAARTRVYVKGLGLVVDEPSAAAMNTRTGSLIAVGALAEQMTGRTPDYIKVVHPVTGGTVIDIEMAQRMLRQLLGDKLRRQLRRKPRLRAAACTPHDSDPLAQRATVETLVGLGARRVELVDTLIAAAVGCGLPVEQPTASMIMVCGAATTQIAVLSLGSIVTAARIPVGGDAIDHAVIQHLRQHHELMLPSQSVRPLQVALSGSGLSAHGPAMTEIHGRDVATGLARSVQVDTAAMRQAIHAPLTAVLDGLGKILRDCPPDLVADVADCGIVMVGGSAQLPGLEQLLRNATGVPVHIAERPDVCSVLGLGAMLDGKIEPLVLDPLAC
>CP027306.1|AXE77770.1|2953723_2954290_+|hypothetical-protein
MTSPAHFGPREFQLVLLRRMADHQPALVDDARQELSASLAEMREANRRWQAMVRAPRGRGALRRYRSVLGEPESSVHRTIGDLECDALLWPVPLWPDLRFEVMVAPGGAVWNEWLVRAPGAPGPELRTVEDLRPWSGTVDEVARAFAPARPMEGSAPTRWALAITAPGTGEPYVAEFTWGLFQRLLPG
>CP027306.1|AXE77769.1|2952892_2953645_-|hypothetical-protein
MDYCHPCQRHLNGALACAGCGTPAEALSHYATPAFSGHEPDAERETPAPSQPGGRSRRGHGAAQPARGTHGSHRPDRRAGAQGRGRRTHRRRGRTALLVVLGVVLAAGALSLAELAIEPKGDDGASDYVRESTSVTTEPAPDPSASDAVEPPGPVGGPSVLPATDSHPAADGRQSSAGTSHSRPAASASTASSAPAEPSSGPTAGGMPRDPSGSARSSGEPTKSTPPASPAPTPTPTESESCWWIPWFCQ
>CP027306.1|AXE77777.1|2966649_2966949_+|hypothetical-protein
MRYRLTFIAGLALGYVIGARAGRERYEQLKKSARQFAQNPAVRNTAESAAQSGRDLAGKAYHAVSDKVGEKVPASVADRMRSLRDRGQNNEDDWGTTNT
>CP027306.1|AXE77778.1|2967019_2968465_+|sugar-kinase
MGIVAGLDSSSAFTHIVVCDTDTGAVLRRGYAAHPVDAKATEVDPQAWLLSLGEAATGGLLEGVQAIGVAAQQHGLVPLDHQGNLVRPALLGNDRRAQVAAADLIDGLGGRQAWAEAVGSVPQAAQPVSKLRWLARTEPEAAQRVASVLQPHDWLVWQLLGRPARRTTDRGAASGTGYWSAGSGAYRPDLVELALGHQAALPEVLGPSDAAGTTPEGLLISAGTGETMAAAFGLGVGAGDAVVSLGASGSVMAVHHEALSDPSGMITSFADATGMHLPVVYTSNAVRALRGTVEMLGVEGLEELSALALKSTPGASGLVLLPYLEGERTPHLPHTAGTLCGLRRESMKPEHLARAAFEGMLCSLADALDVLRGRGVEVRRVFLLGAAAELPAVQGLAPALFGTQVVVPQPAEYAALGAARQAAWALGVSRGTADPLTPPAWQGAAAQVLEPGEELAAGRAVRQQYVATRDQIHPGAFDSAS
>CP027306.1|AXE77779.1|2968634_2970368_+|multidrug-ABC-transporter-ATP-binding-protein
MLIKLLRACLGPYKKPILLLVLLQLLQTCASLYLPTLNADIIDNGVVKGDTGYILEFGGIMIAVSIAQVVCNMGAVYYGARTASALGRDVRASIFDRVQSFSAREVGRFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIIMALGQDVPLSAVLLAVVPVLGIAVSLIVKRMRPLFRTMQERVDTVNRVLREQITGNRVIRAFVRDRYEEERFRGANNELTDVALSTGRLMALMFPTVMTVVNVSSIAVVWFGAHRIDSGGMEIGALTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLETESSVVPPVEPVSELRAHGHLEVRGADFRYPGAEEPVLRSVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGQVLVDGTDVRTLEPALLAKTVGLVPQKPYLFSGTVATNLRYGNPDASDEELWHALEVAQAKEFVEALEHGLHAPIAQGGTNVSGGQRQRLAIARTLVQRPEIYLFDDSFSALDYATDAALRGALSQETAEATVVIVAQRVSTIRDADRILVLDEGRVVGSGTHHELMDGNDTYREIVLSQLTEAEAA
>CP027306.1|AXE77780.1|2970367_2972299_+|multidrug-ABC-transporter-ATP-binding-protein
MAGPGGRMMAGGAPTDRSMDFKGSSKRLLKRFAAEKTPLYVMLAASVLSVGLSVVGPKILGRATDLVFAGVVGRSMPEGTTKEQAVEGLRRTNSGLADMLSGVDFTPGHGIDFGAVGDVLLAALAVYVGAGLLMLVATRLSIRIINQIVFQLREDIQTKLSRLPLSYFDRAKRGEVLSRATNDIDNISQTMQQTMGQLINSLLTIVGVLIMMFWVSPLLALVALVTVPLSVVVASKVGKRSQPQFVQQWKVTGKLNAHIEEMYTGHTLVKVFGRQEESAKGFAEQNEALYEAGFKAQFNSGIMQPLMMFVSNLNYVLIAVVGGLRVASGSLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGIASAERIFELLDAEEQGADPAPGTGEHPEELRGSVSLEKVSFRYDPEKPLIEDLSLNVEPGHTVAIVGPTGAGKTTLVNLLMRFYDVTGGRITLDGVNVANMSRDDLRSGIGMVLQDTWLFGGSIAENIAYGASREVTREEIEEAAKAAHADRFIRTLPDGYDTVIDDEGSGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHDELLDAEGAYARLYSAQFAQAVAEVD
>CP027306.1|AXE77781.1|2972452_2973547_-|RNA-polymerase-subunit-sigma-70
MQTRTLTETEHVSAIPAQNRAVRHPEAAVEPQTPPDPPEALMEELPEAPETPESRGRPETAGPSSDLFRQYLREIGRIPLLCAADEVELARRVEAGLFAEERLASTPDPDTRLAVDLDRLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAEQLDLTPERVGEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLEAVLSTLNERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
>CP027306.1|AXE77782.1|2973821_2975729_-|DNA-primase
MAGRINDDDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPSHQRGERIRLVEAHKVAAQFYVEQLDSPEAEIGRKFLAERGFDQAAAAHFGVGYSPAGWDHLTRYLRGKGFSDKELITSGLSQDGRRGPIDRFRGRLMWPISDTSGEVVGFGARKLRDDDNGPKYLNTPETSIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGITTAIATCGTAFGGDHIKILRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAAETYIAIAPDNMDPCDLRLAKGDEAVRDLVEPRTPLFEFALRQIVGRYDLETPAGRGAALDEAAPVVARIKNSSSQHEVAVQLAGMLGILDTQFVVKRVGQLARWARERGEQRGPAQAPSRGGPQPQQVRAPAATSGPALNLRSPAHRTERELLKLALQKPALVSPAFDAYGADEFTAPPYAAVRQCIAEAGGAETGVPETREYLVQVLDAAPNDTVRNLVTELAVEVFHGKTIDETYAGMQLVQVRLRAVDRRINDVQGSLARLGSNVAPDHLAAAQNEVWVLQQYAQALRNNGADAL
>CP027306.1|AXE77783.1|2975874_2977134_-|FAD-dependent-oxidoreductase
MVDAHRTFVIVGGGLAGAKAAETLRAEGFSGRVILLGDERDHPYERPPLSKGYLTGKEERDSVFVHETAWYAGADIELHLGQPVTSLDREARSVQLGDGTVVHYDKLLLATGAEPRRLPIPGTDLAGVHHLRRLAHSDRLRNVLASLGRDNGHLVIAGAGWIGLEVAAAARGYGAEVTVVEPEPTPLHQVVGPELGQIFTDLHSDHGVRFHFGVRLAEIIGQDGLVLAVRTDDGEEHPAHDVLAAIGAAPRTALAEAAGLDMAARKDGGGIAVDASLRTSDPHIFAAGDVANVAHPLLGARLRVEHWANALNSGPAAARAMLGKDVSYDRVPYFFSDQYDLGLEYSGWAPPGSYDQVVIRGDAGKREFIAFWLKDRRVLAGMNVNVWDVTETVQELIRSGRQVDPDALADPSVPLVSLN
>CP027306.1|AXE77784.1|2977316_2978639_-|deoxyguanosinetriphosphate-triphosphohydrolase
MDGMDGTQGTQDHGMAPYGAADAERWDTEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVTPGTRSHAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVETACLAHDLGHPPFGHNGEQALNDFASDCGGFEGNAQSLRLLTRIEPKRFVPDTRTGELVSVGLNLTRAALDAATKYPWPRGGHPFDPGSPKFGVYEDDLPVFEWARQGAPKDRKCFEAQVMDWSDDVAYSVHDFEDGLHAGHIDPNCLYAEPERNEIWAVAIGRYVPVDTEPEELADALDRLIGQDWWPHGYDGSAVAQARLKDATSQLIGRFCLAAESSTRLAYGTGRLGRYGAELVVPREARNECAVLKAVADRYVMQRAEQEAIRADQRIVIAELAAALTARAPEGLEPQFRALFYAAHDDDRARKRVLVDQIAALTDASARSLHASLTGRRR
>CP027306.1|AXE77785.1|2978675_2978906_-|hypothetical-protein
MTESAPAHPDESLPLDRTAQLLTRITAQLGTQLSRVSLNGTRRAAQAPASGAVRRFAAGVATTEQRLPRAARRASA
>CP027306.1|AXE82760.1|2979319_2980117_-|hydrolase
MIASDLDGTLLRNDGTLSPRTLRALRTAESAGAEVVLVTARPPRFVDRLAEAAGLAGTAVCSNGALVYDIGTRTVVSSRALPLATARRVATALAAAVPEIGFALETGSHVLYEPAYRLRLSEDIDAELPVPSLADLWLTDLPVTKLLAWSDRLDADALLAAAEEGAGGEVQLTHSGGRGLLEISASGVTKAGTLSMLCAGRGIDATEVIAFGDMPNDLTVLDWAGTGYAMGNAHPSVLAAIRTHTLSNEEDGVAHVIERLFGGTA

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Crispr_ID: CP027306_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP027306_8

5047624-5047783

Orphan

Consensus_repeat	Method
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP027306_8

>merge|CP027306|8|5047624-5047783|CRISPRCasFinder
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGCGCGGAAGCGGGTGGGGTAGGCGGGGGCGCGCGCCGTCCGGCGGCAAGATCAAGCCCGTCCGTGGTGCGCACGGCCGCGGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC

>CP027306|8|8|5047624-5047783|CRISPRCasFinder
GTGGTGCGCACGGCCGCCGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC	GCGGAAGCGGGTGGGGTAGGCGGGGGCGCGCGCCGTCCGGCGGCAAGATCAAGCCCGTCC
GTGGTGCGCACGGCCGCGGTGGCGTCGGCGGTGTTCCTGGTGTGGCGGGC

Protein	Signature genes	Signature genes Name	Protein_function
CP027306.1\|AXE79329.1\|5042183_5043827_-\|helicase	unknown	unknown	gnl\|CDD\|223989
CP027306.1\|AXE79327.1\|5038428_5039118_+\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
CP027306.1\|AXE82987.1\|5044050_5046516_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|379300
CP027306.1\|AXE79331.1\|5049281_5050361_-\|iron-ABC-transporter	unknown	unknown	gnl\|CDD\|227119
CP027306.1\|AXE79323.1\|5029042_5030308_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
CP027306.1\|AXE79335.1\|5052794_5053646_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
CP027306.1\|AXE82989.1\|5055313_5056687_-\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE79322.1\|5028756_5029032_+\|DUF4031-domain-containing-protein	unknown	unknown	gnl\|CDD\|379076
CP027306.1\|AXE79326.1\|5035890_5038230_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
CP027306.1\|AXE79325.1\|5031291_5031654_-\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE79337.1\|5054331_5055219_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP027306.1\|AXE79324.1\|5030397_5031081_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226789
CP027306.1\|AXE79338.1\|5056807_5057440_-\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE79333.1\|5051476_5052100_+\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|223620
CP027306.1\|AXE79330.1\|5048430_5049285_-\|cobalamin/Fe(3+)-siderophore-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
CP027306.1\|AXE79328.1\|5039219_5041292_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
CP027306.1\|AXE82986.1\|5041655_5041871_+\|hypothetical-protein	unknown	unknown	unknown
CP027306.1\|AXE79332.1\|5050357_5051368_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
CP027306.1\|AXE79334.1\|5052120_5052582_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340413
CP027306.1\|AXE79336.1\|5053657_5053846_+\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231

Protein	Function_ID	Function_description	E-value
CP027306.1\|AXE79329.1\|5042183_5043827_-\|helicase	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	3.34423e-110
CP027306.1\|AXE79327.1\|5038428_5039118_+\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	6.61628e-25
CP027306.1\|AXE79333.1\|5051476_5052100_+\|haloacid-dehalogenase	gnl\|CDD\|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	4.56944e-23
CP027306.1\|AXE79323.1\|5029042_5030308_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	7.07851e-84
CP027306.1\|AXE79335.1\|5052794_5053646_+\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.23237e-09
CP027306.1\|AXE79330.1\|5048430_5049285_-\|cobalamin/Fe(3+)-siderophore-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	6.35772e-125
CP027306.1\|AXE79322.1\|5028756_5029032_+\|DUF4031-domain-containing-protein	gnl\|CDD\|379076	pfam13223, DUF4031, Protein of unknown function (DUF4031). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 91 and 130 amino acids in length. There is a conserved HYD sequence motif.	6.78437e-34
CP027306.1\|AXE79326.1\|5035890_5038230_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
CP027306.1\|AXE79337.1\|5054331_5055219_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.82704e-26
CP027306.1\|AXE79324.1\|5030397_5031081_-\|hypothetical-protein	gnl\|CDD\|226789	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown].	1.0128e-47
CP027306.1\|AXE82987.1\|5044050_5046516_-\|DNA-binding-protein	gnl\|CDD\|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	3.97571e-43
CP027306.1\|AXE79328.1\|5039219_5041292_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	6.31617e-69
CP027306.1\|AXE79331.1\|5049281_5050361_-\|iron-ABC-transporter	gnl\|CDD\|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	1.15337e-77
CP027306.1\|AXE79332.1\|5050357_5051368_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	6.02705e-84
CP027306.1\|AXE79334.1\|5052120_5052582_-\|hypothetical-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	5.5351e-14
CP027306.1\|AXE79336.1\|5053657_5053846_+\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	3.35354e-12

>CP027306.1|AXE82987.1|5044050_5046516_-|DNA-binding-protein
MGMTTPPRTLAEALRARDDESLAGLLRARPDLLTPVPGDITQLATRAGTRASVVRALEHLDRFALQTAEALAVAPDPAPYETLLGLLTGDGRDDGEYRGDADAAIGDALPAALTTLREQALVWGEDDRLRLVRTARELLAPSPQHPSPTGLGPTVAEATAGMSPGRLQDILATAGLPATHDPVSAVTSLSALFTDRARMGELLDTAPAEALSVLDRLVWGPPYGEVTPNPTPPVKWLRDRGLLLPVSTRTVVLPREAALHLRAGRAHRVPEPQPPAVEAVANRDPQAVDSAAAGQAFLAVTTVEELLKSWNGGGPAILRAGGLSVRELKKTATTLDVSEPVAAFWVELAYAAGLLASDGEADERYAPTPAYDDWAELPAQDRWVRLATAWLAATRTPGLVGGQDAKGRALSALGPDLDRSAAPEVRHRVLALLASLAPGTAPAPETVLARLRWERPLRGASASAGDTTDLRSRIALWTLNESELLGITGRGALAAHTRALLDSEPAEAAALLAPLIPEPLDHVLLQADLTAVAPGPLERPLADMLSALADIESKGGATVYRFTPGSVRRALDAGQSAADLHAFLAAHSRTPVPQPLSYLIDDVARRHGHLRIGAASSYVRCDDEAVLNELLADRRSATLRLRRLAPTALAAQVDPASLLEGLREMGYAPAAESAEGDVLITRAGARRTPPRTAPVPVPEGPPVPDATLLGAAVRAIRAGDTAATVARKDNGTTDAPAASSGSLPRTTSAETLATVQAAAMTGSALWIGYVNADGAASQRVIAPVRVEGGFVTAYDHTADEVRTYPLHRITGVAELADDATP
>CP027306.1|AXE79329.1|5042183_5043827_-|helicase
MTGPLIVQSDKTLLLEVDHDQADACRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGHDAEQVVDALVQYSRYPVPHALLVDIAETMARYGRLTLSKHPVHGLVLTSTDRPVLEEILRSKKVQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELAEDGWALRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHELVKRTSLTEDEIGEYSGTRKEIRPVTIATYQVLTTRRKGIYPHLELFDSRDWGLVIYDEVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPADCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEALVRKHRGEQTLVIGQYIDQLDELGEHLNAPVIKGETSNAQREKLFDAFREGELSVLVVSKVANFSIDLPEATVAIQVSGTFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDADELLTDN
>CP027306.1|AXE82986.1|5041655_5041871_+|hypothetical-protein
MSTVSLNPRRTGPAHGATAATGHPYTHHVGDALRAVKVYARAAFGVLVLGEYAEEAGVHRGVHRGVHRREH
>CP027306.1|AXE79328.1|5039219_5041292_-|AAA-family-ATPase
MPAHEHESDTTTDPLARERAHLAASRSALRAMREDAQALDIRDVTANWVNAAVLQAQIDERIKSLADLAHTPLFFGRLDYLHRVGAEQAEGAEGEQFYIGRRHVHDADGDPMVIDWRAPVSQPFYRASKKDPQDVGQRRRFGYTGGELTAYEDEHLSDPTEAAQTSKLLQAEIERPRVGPMRDIVATIQPEQDEIVRSGLGGTVCVQGGPGTGKTAVGLHRVAYLLYAHRERLARTGTLVIGPNRSFLHYIEQVLPALGELEVKQATVDDLVTAGIEVRGTDSAAAAVVKGDARMAEVLRRAIRSHVTLPTEPVMVVRGSRRWRVPAYELEEIVTELLARDMRYGAAHEALPQRIAHSVLVRMEEAGEAPDDRVQNAVARNPAVKAAVKAIWPAVEPAKLVLRLLVDAEFLAAHAQGLLTEDEQKTILWTRPVRSVKSAKWSAADAVLIDEANDLVARTHSLGHVVLDEAQDLSPMQYRAVGRRCSTGSATVLGDLAQGTTPWSTESWAQALHHLGKSDAVVEELTAGFRVPREVIAYASRLLPVISPGLAAVESVRESPGSLEVRGVGDPAELNAAVLAACEESLRQEGSIGLIAADARIPALADALAAAGHAYLSPGEETNAESRLTLVPASLAKGLEYDYVVLDEPAAVVDGEPDERTGLRRLYVALTRAVSGLTVVHAAELPAQLL
>CP027306.1|AXE79327.1|5038428_5039118_+|copper-homeostasis-protein-CutC
MSNRAVLEVIALDAGDAVAAQAGGADRLELVTDMAADGLTPSCATFAEIRAAVDIPLRVMLRLADGFAAGDIDVLVARAHELRAQGAEEFVLGFLDAEGHPDLVAVERLVAELDGCRWTFHRAIDRAADRDALRKQLADMPGLDTYLTAGSPKGVDDGIATLLAEAARKGEPGYEPQILVGGGLRLEHLPQLLSAGIDAVHIGGAARPHGWSGPVDAAAVREWRAVLDA
>CP027306.1|AXE79326.1|5035890_5038230_-|copper-translocating-P-type-ATPase
MNQQCIPPRGIDVSAREDIVSAHTATTGTGTAVGTTAEVELAIGGMTCASCAARIEKKLNRMDGVEATVNYATEKAKVSYRGEDISVQDLIATVEKTGYTAHEPAPPVRTEDDAPGAADADELRPLRQRLLTAVVLAVPVIAMSMVPALQFDYWQWLSLTLTAPVVTYAAWPFHRAAWTNAKHGAATMDTLISVGTSAAFLWSVWALFFGTAGMVGMTHPFELTIGRSDGAGNIYLEAAAGVTAFILAGRYFEARSKRKAGAALKALLELGAKEVTVLRGGHEVTVPTADLQVGDRFLVRPGEKIATDGTVVEGASAVDASMLTGESVPVEVGVGDSVTGATLNAGGRLVVEATRIGADTQLARMAKLVEDAQNGKAAAQRLADRISAVFVPVVIALALGTLGFWLGNGAGLTAAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGILIKGPEVLETTRRVDTIVLDKTGTVTTGRMTLLDVHTADGTDESDVLRLAGALEHSSEHPIAQAVAAGAAERTGAALPTPEDFANVAGLGVQGVVEGHAVLVGREQLLAEWEIHLPVELARQKAAAEAAGRTAIAVAWDGEARAVLEVADAVKDTSAEAVERLRTLGLTPILLTGDNRAVAEAVAAEVGIEKVYAEVMPEDKVNVVKDLQAQGRSVAMVGDGVNDAAALAQADLGLAMGTGTDAAIEAGDLTLVRGDLRAAADAIRLSRKTLGTIRTNLFWAFAYNVAALPLAAAGLLNPMIAGAAMAFSSVFVVGNSLRLRGFRAAA
>CP027306.1|AXE79325.1|5031291_5031654_-|hypothetical-protein
MYDEQVGEPLRIDIIEGVANLTFTQRPARASDLQWLHEKLNDSSPAIRLGTALSLMAREGQEKEAGHEDDGRSPLKQIALDARAEGERALRQTAWLANKSTDWALERTVDQNAQSGGTDV
>CP027306.1|AXE79324.1|5030397_5031081_-|hypothetical-protein
MSDSSRAGGAHGVDSADDSLRERWRNALVGARGGASGPDPMPYADNLLARWAEPQRRYHTTAHLVAVLDRIDTLAGYAADADAVRLAAWFHDAVYRPDRSENEERSAALAERALPEAGVPADVTAEVARLVRLTVTHDPADGDTNGEVLCDADLAILAADPKEYAAYAAQVREEYGFVPDDAFREGRAAVLRQLLGLPRLFRTPHGVARWEPGARQNLLTELELLSH
>CP027306.1|AXE79323.1|5029042_5030308_-|MFS-transporter
MPDSAARRSRMPLAVYILGLSVFALGTSEFMLSGLLPPIADDMNVSIPRAGLLISAFAIGMVIGAPLLAVATLRLPRRTTLIALISVFGLGQVAGALAPTYEVLFASRVVSAFACAGFWAVGAAVAIAMVPVNARARAMAVMIGGLSIANVLGVPLGAFLGENLGWRAAFWAVGAASAVALVGVTTLIPRIPLPEQKPRLKQEMSIYRDRQVWLSIVITALAAGGVFCAFSYLAPLLTDVAGLDSGWVPTVLALFGIGALVGTTIGGRVADAHLFGVLMSGIAASTVFLVALALFASNQVAAVGLSFLLGLSAFYTAPALNARMFNVAGAAPTLAGATTTAAFNLGNTGGPWLGGTVIDADFGFAATAWAGAAMTVLALVAVVFSLRLQGRGRSRRVTGSPAAASSEVSGKASSQAGTPAV
>CP027306.1|AXE79322.1|5028756_5029032_+|DUF4031-domain-containing-protein
MTVYIDPPDWPGHGRFWSHLVSDVSFEELHTFAASIGCPPRAFERDHYDVPESRYEDAVRAGAKEIGSKELVRRITEAGLRRPKGRPAPAV
>CP027306.1|AXE79330.1|5048430_5049285_-|cobalamin/Fe(3+)-siderophore-ABC-transporter-ATP-binding-protein
MSSTRTSDATATATSRLTVRELTLAYEDRTVVHELDLAVPDGRVTVIVGPNACGKSTTLRALGRLLKPRGGAVLLDGTELSKIPTRKIAQSIGLLPQTPVAPEAITVSDLVARGRQPHQHWWQQWSQEDERAVTDAMERTDVTALGDRSVDELSGGQRQRVWIAMALAQETDLLLLDEPTTYLDIAHQVEVLDLVRRLTAPAADGTRGRTVVTVLHDLNQAARYADHLVAMKAGRIVAEGHPNDIVTAGLVREVFGLDAVIVPCPVTGSPLVVPGAPWQATPEL
>CP027306.1|AXE79331.1|5049281_5050361_-|iron-ABC-transporter
MSDTTVRVRPAGYHVVRIGARGRFLLHRRATVVAAALVASLAAVCVAYLCVGESFVSPGEVVKVILGQPSPDELVVGTLRLPRMVVGLLVGAAFGIAGALIQTVARNPLASPDIIGISQGASALTVGAMTFGVTSYTVLPYLSVIGGVAAAALVYVFAWRGGLHATRFVLIGIGFAIALRSVTTLFLTKGDYLVAQQAQIWMTGSLNGRGWSEAAPIGWTLLILLPAVLWAARAQRTVSMDDDTATALGVRLGRVRLGLVALGVVLASVATGTAGPVDFVALLAPQIARRMTRTAQIPLFCSALLGALIVVFADLLARRLFSPTELPVGVLTAAVGAPYLIWLIIRGHGGGRGRSGGTA
>CP027306.1|AXE79332.1|5050357_5051368_-|iron-ABC-transporter-permease
MSAAAPRRSRRALATAAAVVALLVAILLSLAVGARSIPPSEVIDALLHGGHSDAAEVIRNMRVPRTLIGLMVGAALALAGTVLQGITRNPIADPGILGISQGASVGVVLAIAYAGIHTLTGYVWFAFAGAAIASVAVYAIASSGRGGATPVKLALGGAAINALLVSVTMAVLTTKASALDEFRFWQVGSIAGREADVAQQIWPFMLVGTVLVLSVARGLDALALGEDVAKGLGQKVATVRIVGGIGATVLTGVGVAAAGPIAFIGLAVPHIARAIVDSDHRWVLPMAALIGPVMLLVSDVIGRILFPPSEVPVGVMTALIGVPFLVTLVRRKAVPA
>CP027306.1|AXE79333.1|5051476_5052100_+|haloacid-dehalogenase
MDAMPSHPLTVGFDLDMTLIDSRPGIKAAYLALSAETGTPIDADLVASRLGPPVDDELRNWFPADAVAATADRYREIYPTYAIAPSPALPGARESVAAIRERGGRAIVVTAKHLPNAELHLAHLGIEPDAVIGGLWAEAKGEALREHGADVYVGDHTGDVRGARTAGALSVAVTTGPCDAEELRAAGADVVLSSLTDFPSWLDGYAA
>CP027306.1|AXE79334.1|5052120_5052582_-|hypothetical-protein
MVSATVSPPWTYTLQLPQDPRAPGVARATLRTILRVHGMRELTETAELLASELVTNAYLHSSGAYSLRLRDAGRSRIRLSVWDTNPHIPAPFQWAAEAPEELAERGRGLYLVTLYAESWGAHPMGTGLPGPGGKLLWVECAAKTDDAPSYGAR
>CP027306.1|AXE79335.1|5052794_5053646_+|transcriptional-regulator
MASRSTPGVRRLRLGAELRRLRERAGLTATEGARLLGISQAQLSNIEASRFGVSAERLRAMARNYRCSDSAYVAGLLDLAGERSSGWWETFREVLPSPLLDIAELEHHATGLRSANTSHVPGLLQTTDHAREIFRQVVPEFSRSDIEHRVSHRLQRQALLDRPSPPTYGAVIHEAALRVPVGGPVIARNQLRHLLEQGEREHITVQVIPFAIGAYPGSGQTILYVHGSVPRLDTVSLDQSHGPVLVDAEAELEAYRLLLARMAAVALTSDKSRDFIHSLIADQ
>CP027306.1|AXE79336.1|5053657_5053846_+|DUF397-domain-containing-protein
MHQHSWQRSSYCGQGESCLYVAARNSTVSLTESSDPTGAILRTTPATWAALVRTLKENRAYG
>CP027306.1|AXE79337.1|5054331_5055219_-|alpha/beta-hydrolase
MPIVEVSPGVSIAYETFGDPSDAPVLLVMGFSAQMIAWHEDFCRALARRGRYVIRYDNRDCGLSTKFDDHPVDTGRLIAAVSSGDIPSALAMVPYTLRDMADDGLDLLTALGIERAHVVGSSMGGMIAQTMAITRPTRVLTLTSMMSSTGEPEYGRSSPEAQAVVSSPKPADREGYIAAAERDLVWASKRYGDPAALRELAANSYDRAYYPAGVGRQLGAMVLSGSRAHALRKLRVPTLVIHGLDDTLVDPSGGERTADLVPGAKLLLIPGMGHDRPRELWPEINDAIEAHTSRE
>CP027306.1|AXE82989.1|5055313_5056687_-|hypothetical-protein
MPDTKTLLAGLHAGGPDLRVNRAGGGSVVQLCTAAGQALVSLEAPRYLQVPGEVARLLGPDVRAESPVWWTEARATTAVEEAGRLAGSVAGRLTAVLGGTVWPREAAHTDVVTDLADATTTAAPMGVDILTDTAAVVIQGRPVVAATTWLTDVVRNAVRTGRELQILTPPGTRLTLPARTLLDGLPSRWVVRDPECGYYDGLCGAVLHWHGGRFVPVVGDGPRIADAFRPRPGKEGERQLLLSIRTIHPADERLVLGSALEQAWRTLTGAPPAGWATAEPVNVPWSPRQLTDLARTRAQQSLPTWIVAVGAPDRPAIAAVRTVRTRAGVEEHITLAIGCGADQSTPVDALPELAETLATGHNLATMITQLRTARADLTIPAHYEPPPVPVGLTLGPDAVADRGLDQDRGVFDGITPARLGPATRPALHYALGDGTDLAAWQRLQRINDRLNGARQKE
>CP027306.1|AXE79338.1|5056807_5057440_-|hypothetical-protein
MRAPRECGSWYWDLYEAAAPGLESALSVAARMCDVLARFELLAPIELKYSWYVLDVGPTGVTSTLELTRPLGDPSILGQVRGSRPSAHPSADIADIDVIGTGTWIDMAGKPRKEPQLVDLSLSTAPTGLSAELSVHHDIWGWYDFAGHPHPEVYRNNAPRLTAALKELGILLGAPPEPGEPTYFGAATPEGLATPDAYEDGLGPDLTGRL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP027306_2	2.1\|640836\|25\|CP027306\|CRISPRCasFinder	640836-640860	25	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1175321-1175345	4	0.84
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	CP047034	Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence	26676-26702	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015291	Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence	41016-41042	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP047040	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence	26647-26673	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_011962	Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence	84788-84814	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	65059-65085	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP030274	Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence	86527-86553	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015215	Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence	50340-50366	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	267086-267112	4	0.852
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP010421	Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence	96535-96561	4	0.852
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	349351-349379	4	0.862
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	455955-455981	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	135131-135157	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	162749-162775	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	131285-131311	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	155841-155867	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	162758-162784	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	136205-136231	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	155841-155867	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	129257-129283	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	129258-129284	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	155850-155876	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	155868-155894	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	155840-155866	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	135145-135171	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	135143-135169	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	135142-135168	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP015747	Shinella sp. HZN7 plasmid pShin-11, complete sequence	83746-83772	5	0.815
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1281771-1281797	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1336288-1336314	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1206726-1206752	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1266429-1266455	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1205823-1205849	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1238752-1238778	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1238743-1238769	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1206718-1206744	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1206074-1206100	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1206709-1206735	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1281893-1281919	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1281876-1281902	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1281868-1281894	6	0.778
CP027306_3	3.1\|2688537\|27\|CP027306\|CRISPRCasFinder	2688537-2688563	27	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	273908-273934	6	0.778
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	115568-115596	6	0.793
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP017303	Rhodococcus sp. YL-1 plasmid pYLL1 sequence	151779-151807	6	0.793
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	181347-181375	6	0.793
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	68592-68620	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP045177	Streptomyces tsukubensis strain AT3 plasmid pST1, complete sequence	9501-9529	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP020041	Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence	16981-17009	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	516363-516391	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	MT498053	Streptomyces phage PHTowN, complete genome	26397-26425	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	MT897908	Streptomyces phage ShakeNBake, complete genome	26415-26443	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	229803-229831	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	615945-615973	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	166832-166860	7	0.759
CP027306_6	6.1\|4467291\|29\|CP027306\|CRISPRCasFinder	4467291-4467319	29	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	65472-65500	8	0.724

1. spacer 2.1|640836|25|CP027306|CRISPRCasFinder matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 4, identity: 0.84

gcgcgcctctcacgatcgaggcgca	CRISPR spacer
gcgcgcctctgacgatcaaggcgtt	Protospacer
********** ******.*****.

2. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to CP047034 (Rhodobacter sphaeroides strain DSM 158 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

3. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP015291 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid c, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

4. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP047040 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

5. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NC_011962 (Rhodobacter sphaeroides KD131 plasmid pRSKD131A, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

6. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP051471 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

7. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP030274 (Rhodobacter sphaeroides 2.4.1 plasmid pB, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

8. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP015215 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid d, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ggagcggttcgcgcaggagcgcggcga	Protospacer
************ * **********

9. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcaggtggtcgccctggagcgcggccc	Protospacer
* **  * *******************

10. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP010421 (Azotobacter chroococcum NCIMB 8003 plasmid pAcX50f, complete sequence) position: , mismatch: 4, identity: 0.852

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcaggtggtcgccctggagcgcggccc	Protospacer
* **  * *******************

11. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 4, identity: 0.862

tggggccgaaccggccgaccacc-cgggca	CRISPR spacer
tgcggccgaaccggtcgaccacctccggc-	Protospacer
** ***********.******** * ***

12. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
gcgccggttcgccctggaacgcggcct	Protospacer
* . **************.*******.

13. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

14. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

15. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

16. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

17. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

18. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

19. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

20. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

21. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

22. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

23. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

24. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

25. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

26. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

27. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cacgccgttcgacctggagcgcggccc	Protospacer
 . ** ***** ***************

28. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP015747 (Shinella sp. HZN7 plasmid pShin-11, complete sequence) position: , mismatch: 5, identity: 0.815

ggagcggttcgccctggagcgcggccc	CRISPR spacer
cgcgcggctcgccgtggagcgcggccg	Protospacer
 * ****.***** ************

29. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

30. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

31. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

32. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

33. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

34. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

35. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

36. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

37. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

38. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

39. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

40. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

41. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
tcaagtgttcgccctggcgcgcggccc	Protospacer
  *.  *********** *********

42. spacer 3.1|2688537|27|CP027306|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 6, identity: 0.778

ggagcggttcgccctggagcgcggccc	CRISPR spacer
ccagcggttcggcctggagcgaggcga	Protospacer
  ********* ********* ***

43. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggcgaccgcccgggca	Protospacer
. *  ********* *****.********

44. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggccaccacccgggca	Protospacer
. *  ********* * ************

45. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

tggggccgaaccggccgaccacccgggca-	CRISPR spacer
ctcggccgaaccggccgacga-ccgggcgc	Protospacer
.  **************** * ******.

46. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gcgggccgagccgggcgaccacccggcag	Protospacer
  *******.**** ***********  .

47. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP045177 (Streptomyces tsukubensis strain AT3 plasmid pST1, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gctggccgacccggccgaccgcccggggc	Protospacer
   ****** **********.******

48. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
cccgcacgaaccggcccgccacccgggca	Protospacer
.  *  ********** .***********

49. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
aaacgacgaaccggccgcccacccgggaa	Protospacer
 .. * *********** ********* *

50. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to MT498053 (Streptomyces phage PHTowN, complete genome) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
tcgggccgaaccggccgaacaccatgtac	Protospacer
* **************** ****  *

51. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to MT897908 (Streptomyces phage ShakeNBake, complete genome) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
tcgggccgaaccggccgaacaccatgtac	Protospacer
* **************** ****  *

52. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
gccgcccgaaccggccgaccaccgggtct	Protospacer
   * ****************** ** *

53. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
ccgccccgaaccgggccaccacccgggcg	Protospacer
. *  ********* * ***********.

54. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.759

tggggccgaaccggccgaccacccgggca	CRISPR spacer
cgccgcggaactggccgaccacccgggtg	Protospacer
.*  ** ****.***************..

55. spacer 6.1|4467291|29|CP027306|CRISPRCasFinder matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 8, identity: 0.724

tggggccgaaccggccgaccacccgggca	CRISPR spacer
catccccgaaccggccgaccagcagggcc	Protospacer
..   **************** * ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6924 : 86308

Streptococcus_phage(50.0%)

plate,transposase,tail,integrase

attL 4078:4093|attR 35348:35363

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4078:4093	attL	NA	NA	NA	NA
AXE75662.1\|6924_8019_-\|integrase	integrase	NA	NA	NA	NA
AXE75663.1\|8461_8830_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXE75664.1\|9683_10403_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.8e-29	31.9
AXE82511.1\|10627_11878_-	alpha/beta hydrolase	NA	NA	NA	NA
AXE75665.1\|13139_14516_+	erythromycin esterase	NA	NA	NA	NA
AXE75666.1\|14882_15602_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.5e-27	34.5
AXE75667.1\|16095_16503_-	hypothetical protein	NA	NA	NA	NA
AXE82512.1\|17256_17721_-	hypothetical protein	NA	NA	NA	NA
AXE75668.1\|18377_18782_+	hypothetical protein	NA	NA	NA	NA
AXE75669.1\|19484_20441_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE75670.1\|20358_20955_-	hypothetical protein	NA	NA	NA	NA
AXE75671.1\|26004_26520_-	hypothetical protein	NA	NA	NA	NA
AXE75672.1\|26678_28889_+	hypothetical protein	NA	NA	NA	NA
AXE75673.1\|29293_29944_-	ABC transporter	A0A2H4PQG7	Staphylococcus_phage	4.7e-09	36.5
AXE75674.1\|30188_31628_+\|transposase	transposase	NA	NA	NA	NA
AXE75675.1\|31661_32144_-	hypothetical protein	NA	NA	NA	NA
AXE82513.1\|32701_33436_+	hypothetical protein	NA	NA	NA	NA
AXE75676.1\|33767_34100_-	hypothetical protein	NA	NA	NA	NA
AXE75677.1\|34342_34900_-	DNA-binding protein	NA	NA	NA	NA
AXE75678.1\|34910_37160_-	transcriptional regulator	NA	NA	NA	NA
35348:35363	attR	NA	NA	NA	NA
AXE75679.1\|37579_38434_+	alpha/beta hydrolase	NA	NA	NA	NA
AXE75680.1\|38370_38601_+	hypothetical protein	NA	NA	NA	NA
AXE75681.1\|40405_41344_+	serine/threonine protein phosphatase	A0A075BSL8	Microcystis_phage	1.1e-19	30.0
AXE75682.1\|42150_43380_-	oxidoreductase	NA	NA	NA	NA
AXE75683.1\|43781_44276_+	hypothetical protein	NA	NA	NA	NA
AXE75684.1\|44590_45568_-	alkylmercury lyase	NA	NA	NA	NA
AXE75685.1\|45656_46061_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA
AXE75686.1\|46291_47737_+\|transposase	transposase	NA	NA	NA	NA
AXE75687.1\|47890_49498_+\|transposase	transposase	NA	NA	NA	NA
AXE82514.1\|49542_50019_-	DUF4262 domain-containing protein	NA	NA	NA	NA
AXE75688.1\|50610_50871_-	hypothetical protein	NA	NA	NA	NA
AXE75689.1\|51417_52071_-	hypothetical protein	NA	NA	NA	NA
AXE75690.1\|52576_54562_+	hypothetical protein	NA	NA	NA	NA
AXE82515.1\|56129_57086_+	hypothetical protein	NA	NA	NA	NA
AXE75691.1\|57650_57974_+	hypothetical protein	NA	NA	NA	NA
AXE75692.1\|58565_59786_+	hypothetical protein	NA	NA	NA	NA
AXE75693.1\|59986_61030_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AXE75694.1\|66211_68167_-	hypothetical protein	NA	NA	NA	NA
AXE75695.1\|68373_69723_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE82516.1\|69833_70646_+	lactose ABC transporter permease	NA	NA	NA	NA
AXE75696.1\|70642_71509_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXE75697.1\|71505_73269_+	alpha-galactosidase	NA	NA	NA	NA
AXE75698.1\|73292_74291_+	LacI family transcriptional regulator	NA	NA	NA	NA
AXE75699.1\|75292_76522_-	hypothetical protein	NA	NA	NA	NA
AXE75700.1\|76543_77107_-	hypothetical protein	NA	NA	NA	NA
AXE75701.1\|77205_77400_+	hypothetical protein	NA	NA	NA	NA
AXE75702.1\|77598_79443_+	hypothetical protein	NA	NA	NA	NA
AXE75703.1\|79454_79976_+\|tail	phage tail protein	NA	NA	NA	NA
AXE75704.1\|79980_80712_+	hypothetical protein	NA	NA	NA	NA
AXE75705.1\|81730_83392_+	hypothetical protein	NA	NA	NA	NA
AXE75706.1\|83465_83657_+	hypothetical protein	NA	NA	NA	NA
AXE75707.1\|83666_84308_+	hypothetical protein	NA	NA	NA	NA
AXE75708.1\|84339_84666_+	hypothetical protein	NA	NA	NA	NA
AXE75709.1\|84665_85784_+	hypothetical protein	NA	NA	NA	NA
AXE75710.1\|85813_86308_+\|plate	baseplate assembly protein	NA	NA	NA	NA

DBSCAN-SWA_2

306015 : 367627

Bacillus_phage(25.0%)

plate,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE75820.1\|306015_307236_-\|transposase	IS4 family transposase	NA	NA	NA	NA
AXE75821.1\|308336_309791_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.0e-53	33.6
AXE75822.1\|309878_310361_-	hypothetical protein	NA	NA	NA	NA
AXE75823.1\|312579_313431_-\|transposase	transposase	A0A1P8CWQ3	Bacillus_phage	3.7e-30	36.0
AXE75824.1\|313628_314618_+	hypothetical protein	NA	NA	NA	NA
AXE75825.1\|314747_314930_+	hypothetical protein	NA	NA	NA	NA
AXE75826.1\|314945_315935_+	hypothetical protein	NA	NA	NA	NA
AXE75827.1\|316001_316538_-	hypothetical protein	NA	NA	NA	NA
AXE75828.1\|316536_318219_+	2-polyprenyl-6-methoxyphenol hydroxylase	NA	NA	NA	NA
AXE75829.1\|319331_320474_+	DUF3103 domain-containing protein	NA	NA	NA	NA
AXE75830.1\|320686_320953_+	hypothetical protein	NA	NA	NA	NA
AXE75831.1\|320970_321174_-	hypothetical protein	NA	NA	NA	NA
AXE82532.1\|321297_323328_-	hypothetical protein	NA	NA	NA	NA
AXE75832.1\|323689_324832_-	hypothetical protein	Q6A202	Oenococcus_phage	2.0e-50	30.4
AXE75833.1\|324976_326068_+	LacI family transcriptional regulator	NA	NA	NA	NA
AXE75834.1\|326143_327523_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE82533.1\|327593_328481_+	ABC transporter permease	NA	NA	NA	NA
AXE75835.1\|328477_329356_+	ABC transporter permease	NA	NA	NA	NA
AXE75836.1\|329488_331780_+	hypothetical protein	NA	NA	NA	NA
AXE82534.1\|331791_334014_+	pyridine nucleotide-disulfide oxidoreductase	NA	NA	NA	NA
AXE75837.1\|334055_334907_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXE75838.1\|337770_338514_+	hypothetical protein	NA	NA	NA	NA
AXE75839.1\|338589_339513_-	NADPH:quinone reductase	NA	NA	NA	NA
AXE75840.1\|340290_341997_-	hypothetical protein	NA	NA	NA	NA
AXE75841.1\|345552_347682_-	serine/threonine protein kinase	T2AWK4	Cannes_8_virus	1.8e-12	29.0
AXE75842.1\|349188_351324_-	ATPase	A0A2D2W2C3	Stenotrophomonas_phage	3.8e-07	30.1
AXE75843.1\|351320_352025_-	DUF4255 domain-containing protein	NA	NA	NA	NA
AXE75844.1\|352021_355174_-	hypothetical protein	NA	NA	NA	NA
AXE75845.1\|355389_356118_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXE75846.1\|356322_357651_+	hydrolytic protein	NA	NA	NA	NA
AXE75847.1\|358166_359696_+\|tail	phage tail protein	J9PVC2	Bacillus_phage	1.5e-69	35.6
AXE75848.1\|359735_360176_+\|tail	phage tail protein	NA	NA	NA	NA
AXE75849.1\|360172_360679_+	hypothetical protein	NA	NA	NA	NA
AXE75850.1\|361497_361704_-	hypothetical protein	NA	NA	NA	NA
AXE75851.1\|363286_363793_+	hypothetical protein	NA	NA	NA	NA
AXE75852.1\|363856_364282_+\|tail	phage tail protein	T2KSM5	uncultured_phage	2.7e-05	31.1
AXE75853.1\|364342_365065_+	peptidase M23	NA	NA	NA	NA
AXE75854.1\|365061_366828_+	type IV secretion protein Rhs	NA	NA	NA	NA
AXE75855.1\|366887_367205_+	hypothetical protein	NA	NA	NA	NA
AXE75856.1\|367201_367627_+\|plate	baseplate protein	A0A0E3F3H3	Synechococcus_phage	1.4e-09	37.2

DBSCAN-SWA_3

563163 : 630625

Streptomyces_phage(33.33%)

terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE75985.1\|563163_564120_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE75986.1\|564037_564634_-	hypothetical protein	NA	NA	NA	NA
AXE75987.1\|565214_565934_+	hypothetical protein	NA	NA	NA	NA
AXE75988.1\|565930_566995_+	hypothetical protein	NA	NA	NA	NA
AXE75989.1\|566991_568179_+	hypothetical protein	NA	NA	NA	NA
AXE82543.1\|568217_569087_+	hypothetical protein	NA	NA	NA	NA
AXE75990.1\|569186_569723_+	hypothetical protein	NA	NA	NA	NA
AXE75991.1\|569805_571581_+	asparagine synthase	F2Y1H0	Organic_Lake_phycodnavirus	3.4e-09	26.0
AXE75992.1\|571618_572980_+	aldehyde dehydrogenase	NA	NA	NA	NA
AXE82544.1\|573453_574032_-	potassium-transporting ATPase subunit C	NA	NA	NA	NA
AXE75993.1\|574117_576247_-	K(+)-transporting ATPase subunit B	M1HBF8	Paramecium_bursaria_Chlorella_virus	6.5e-23	23.6
AXE75994.1\|576246_577911_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
AXE75995.1\|577923_578013_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA
AXE75996.1\|578263_580783_-	sensor histidine kinase KdpD	NA	NA	NA	NA
AXE82545.1\|581399_582656_-	hypothetical protein	NA	NA	NA	NA
AXE82546.1\|582701_586025_-	hypothetical protein	NA	NA	NA	NA
AXE75997.1\|586137_586347_+	hypothetical protein	NA	NA	NA	NA
AXE75998.1\|586668_587001_+	hypothetical protein	NA	NA	NA	NA
AXE75999.1\|587420_587624_-	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	3.6e-16	62.5
AXE76000.1\|587949_588552_-	DUF1349 domain-containing protein	NA	NA	NA	NA
AXE76001.1\|588663_589248_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXE82547.1\|589262_589841_-	maltose acetyltransferase	NA	NA	NA	NA
AXE82548.1\|590443_590854_-	glyoxalase	NA	NA	NA	NA
AXE76002.1\|590935_591295_-	hypothetical protein	NA	NA	NA	NA
AXE76003.1\|591673_592491_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE76004.1\|593021_594680_+	hypothetical protein	NA	NA	NA	NA
AXE76005.1\|595209_596511_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
AXE76006.1\|596647_598003_+	hypothetical protein	NA	NA	NA	NA
AXE76007.1\|598461_599721_-	MFS transporter	NA	NA	NA	NA
AXE76008.1\|599771_600530_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXE76009.1\|601016_601202_+	hypothetical protein	NA	NA	NA	NA
AXE76010.1\|602063_604724_-	hypothetical protein	NA	NA	NA	NA
AXE82549.1\|605010_606411_-\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	2.3e-125	55.9
AXE76011.1\|606582_606945_-	hypothetical protein	NA	NA	NA	NA
AXE76012.1\|607342_609055_+	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	5.8e-06	29.7
AXE76013.1\|609051_609441_+	hypothetical protein	NA	NA	NA	NA
AXE76014.1\|609450_611091_-	ubiquinol-cytochrome c reductase cytochrome b subunit	NA	NA	NA	NA
AXE76015.1\|611737_612928_-	amino acid permease	NA	NA	NA	NA
AXE82550.1\|613750_614983_+	protein phosphatase	NA	NA	NA	NA
AXE76016.1\|615700_615907_-	hypothetical protein	NA	NA	NA	NA
AXE76017.1\|616585_616879_-	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	4.7e-09	45.1
AXE76018.1\|616875_617169_-	hypothetical protein	NA	NA	NA	NA
AXE76019.1\|617165_618119_-	peptidoglycan-binding protein	A0A1J0MCN5	Streptomyces_phage	1.9e-67	62.2
AXE76020.1\|618122_618431_-	hypothetical protein	NA	NA	NA	NA
AXE76021.1\|618442_618952_-	hypothetical protein	A0A0S2MU58	Streptomyces_phage	1.2e-23	37.5
AXE76022.1\|619390_620110_-	hypothetical protein	A0A2D1GNZ4	Streptomyces_phage	7.8e-05	44.9
AXE76023.1\|621058_621562_+	hypothetical protein	NA	NA	NA	NA
AXE76024.1\|621859_622090_-	hypothetical protein	NA	NA	NA	NA
AXE76025.1\|623723_625121_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-34	36.2
AXE76026.1\|625153_625654_-	hypothetical protein	Q8W6R2	Burkholderia_virus	1.3e-38	52.8
AXE76027.1\|625889_626117_-	hypothetical protein	NA	NA	NA	NA
AXE76028.1\|626164_626395_-	hypothetical protein	NA	NA	NA	NA
AXE76029.1\|626391_626745_-	hypothetical protein	NA	NA	NA	NA
AXE76030.1\|628331_628667_-	hypothetical protein	NA	NA	NA	NA
AXE76031.1\|628690_630625_-\|terminase	terminase	A0A0R8VCM7	Thermobifida_phage	5.9e-132	53.0

DBSCAN-SWA_4

1012637 : 1047162

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE76311.1\|1012637_1013357_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-26	34.5
AXE76312.1\|1014703_1015303_-	hypothetical protein	NA	NA	NA	NA
AXE76313.1\|1015423_1016491_+	alcohol dehydrogenase	NA	NA	NA	NA
AXE76314.1\|1016529_1017540_+	hypothetical protein	NA	NA	NA	NA
AXE76315.1\|1017559_1017784_+	hypothetical protein	NA	NA	NA	NA
AXE76316.1\|1017854_1018067_+	tautomerase	NA	NA	NA	NA
AXE76317.1\|1019040_1019760_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	29.7
AXE76318.1\|1022149_1022635_+	hypothetical protein	NA	NA	NA	NA
AXE82590.1\|1022818_1023523_-	hypothetical protein	NA	NA	NA	NA
AXE76319.1\|1023715_1024024_-	hypothetical protein	NA	NA	NA	NA
AXE76320.1\|1024764_1024977_+	hypothetical protein	NA	NA	NA	NA
AXE76321.1\|1025062_1026202_-	hydrolase	NA	NA	NA	NA
AXE76322.1\|1026198_1027560_-	hypothetical protein	NA	NA	NA	NA
AXE76323.1\|1027562_1029356_-	hypothetical protein	NA	NA	NA	NA
AXE76324.1\|1029189_1030203_+	hypothetical protein	NA	NA	NA	NA
AXE76325.1\|1030488_1031733_-	hypothetical protein	NA	NA	NA	NA
AXE76326.1\|1031801_1032356_-	hypothetical protein	NA	NA	NA	NA
AXE76327.1\|1034135_1035125_-	LacI family transcriptional regulator	NA	NA	NA	NA
AXE76328.1\|1035159_1036080_+	ribokinase	NA	NA	NA	NA
AXE76329.1\|1036124_1037108_+	nucleoside hydrolase	NA	NA	NA	NA
AXE76330.1\|1037122_1038097_+	adenosine deaminase	NA	NA	NA	NA
AXE76331.1\|1038596_1039178_+	hypothetical protein	NA	NA	NA	NA
AXE76332.1\|1039516_1040236_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.5e-24	31.2
AXE76333.1\|1040571_1041099_+	N-acetyltransferase	NA	NA	NA	NA
AXE76334.1\|1041189_1042626_+\|transposase	IS1380 family transposase	A0A222ZN33	Mycobacterium_phage	6.0e-89	44.5
AXE76335.1\|1043221_1044799_+	alpha/beta hydrolase	NA	NA	NA	NA
AXE82591.1\|1045055_1046363_+\|transposase	transposase	NA	NA	NA	NA
AXE76336.1\|1046442_1047162_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.9e-28	34.0

DBSCAN-SWA_5

2140242 : 2147245

Streptomyces_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE77130.1\|2140242_2140947_+	nucleotidyltransferase	A0A1J0GW18	Streptomyces_phage	6.9e-14	35.8
AXE77131.1\|2140993_2141803_-	nucleotidyltransferase	K4K696	Caulobacter_phage	2.4e-10	37.1
AXE77132.1\|2141806_2142829_-	hypothetical protein	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	5.0e-05	22.1
AXE77133.1\|2142825_2143560_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	6.9e-25	51.1
AXE77134.1\|2143556_2144636_-	transcriptional regulator	A0A2K8HHU5	Bacteriophage	4.7e-30	29.8
AXE77135.1\|2144662_2145364_-	nicotinamide mononucleotide transporter	A0A0F6YPU8	Sinorhizobium_phage	8.4e-12	28.8
AXE77136.1\|2145491_2146598_-	pseudouridine synthase	NA	NA	NA	NA
AXE77137.1\|2146597_2147245_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.3e-10	30.3

DBSCAN-SWA_6

4671420 : 4741484

Bacillus_phage(45.45%)

tRNA,plate,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE79045.1\|4671420_4672932_+\|protease	protease	A0A1B1IRH0	uncultured_Mediterranean_phage	2.6e-10	29.3
AXE79046.1\|4673092_4673284_-	hypothetical protein	NA	NA	NA	NA
AXE79047.1\|4673900_4674344_+	hypothetical protein	NA	NA	NA	NA
AXE79048.1\|4674737_4674950_+	DUF4287 domain-containing protein	NA	NA	NA	NA
AXE79049.1\|4675106_4676006_-	DNA primase	A0A218M971	Mycobacterium_phage	7.5e-13	38.0
AXE79050.1\|4676314_4676626_+	hypothetical protein	NA	NA	NA	NA
AXE79051.1\|4676831_4678007_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXE79052.1\|4678003_4678963_+	hypothetical protein	NA	NA	NA	NA
AXE79053.1\|4678964_4679999_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXE79054.1\|4679938_4680391_+	acyl dehydratase	NA	NA	NA	NA
AXE79055.1\|4680387_4681554_+	lipid-transfer protein	NA	NA	NA	NA
AXE79056.1\|4681744_4682368_+	SigE family RNA polymerase sigma factor	NA	NA	NA	NA
AXE79057.1\|4682511_4684161_+	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.2e-21	23.3
AXE79058.1\|4684281_4688328_-	PAS domain S-box protein	NA	NA	NA	NA
AXE79059.1\|4688542_4689001_-	hypothetical protein	NA	NA	NA	NA
AXE79060.1\|4689755_4690637_+	DUF2797 domain-containing protein	NA	NA	NA	NA
AXE79061.1\|4690670_4691549_+	amidohydrolase	NA	NA	NA	NA
AXE79062.1\|4691629_4692370_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.2e-35	36.3
AXE82945.1\|4692416_4693931_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	2.4e-19	29.0
AXE82946.1\|4693984_4695298_+	glycosyl transferase	NA	NA	NA	NA
AXE79063.1\|4695294_4697457_+	glycosyl transferase	NA	NA	NA	NA
AXE79064.1\|4697461_4698319_-	metal-dependent hydrolase	NA	NA	NA	NA
AXE79065.1\|4698448_4699978_+	MFS transporter	NA	NA	NA	NA
AXE79066.1\|4700072_4700831_+	TetR family transcriptional regulator	NA	NA	NA	NA
AXE79067.1\|4701191_4701662_-	PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA
AXE79068.1\|4701671_4702487_-	hypothetical protein	NA	NA	NA	NA
AXE79069.1\|4702641_4705143_-	MFS transporter	NA	NA	NA	NA
AXE79070.1\|4705166_4705685_-	MarR family transcriptional regulator	NA	NA	NA	NA
AXE79071.1\|4706253_4706472_+	hypothetical protein	NA	NA	NA	NA
AXE79072.1\|4706511_4707309_-	hypothetical protein	NA	NA	NA	NA
AXE79073.1\|4707376_4708243_-	B/F/G family RNA polymerase sigma-70 factor	A0A0A0RV91	Bacillus_phage	4.3e-26	36.0
AXE79074.1\|4708478_4709342_-	B/F/G family RNA polymerase sigma-70 factor	A0A0A0RV91	Bacillus_phage	5.5e-21	35.0
AXE79075.1\|4709540_4709834_-	hypothetical protein	NA	NA	NA	NA
AXE79076.1\|4710628_4711057_-\|tRNA	tRNA-specific adenosine deaminase	S4VYZ2	Pandoravirus	3.7e-10	36.4
AXE79077.1\|4711159_4711720_-	hypothetical protein	NA	NA	NA	NA
AXE79078.1\|4711907_4712135_-	hypothetical protein	NA	NA	NA	NA
AXE79079.1\|4712239_4712875_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXE79080.1\|4712924_4713518_-	hypothetical protein	NA	NA	NA	NA
AXE79081.1\|4713682_4713979_-	antitoxin VapB	NA	NA	NA	NA
AXE82947.1\|4714627_4715245_-	Fe-S cluster assembly protein HesB	NA	NA	NA	NA
AXE79082.1\|4715575_4716397_+	hypothetical protein	NA	NA	NA	NA
AXE79083.1\|4716431_4717763_-	hypothetical protein	NA	NA	NA	NA
AXE79084.1\|4717974_4718601_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXE82948.1\|4718916_4720878_+	hyalin	NA	NA	NA	NA
AXE79085.1\|4720906_4721737_+	DUF4255 domain-containing protein	NA	NA	NA	NA
AXE79086.1\|4721733_4723842_+	ATPase	A0A2D2W2C3	Stenotrophomonas_phage	8.4e-07	28.4
AXE79087.1\|4723968_4724766_+	alpha/beta hydrolase	NA	NA	NA	NA
AXE79088.1\|4724762_4726028_+	cytochrome P450	NA	NA	NA	NA
AXE79089.1\|4726172_4726754_+	hypothetical protein	NA	NA	NA	NA
AXE79090.1\|4730960_4732511_+\|tail	phage tail protein	J9PVC2	Bacillus_phage	6.7e-70	33.5
AXE79091.1\|4732566_4733010_+\|tail	phage tail protein	NA	NA	NA	NA
AXE79092.1\|4733009_4733468_+	hypothetical protein	NA	NA	NA	NA
AXE79093.1\|4734449_4734893_-	hypothetical protein	NA	NA	NA	NA
AXE79094.1\|4735071_4735452_+	hypothetical protein	NA	NA	NA	NA
AXE79095.1\|4735493_4735931_+\|tail	phage tail protein	NA	NA	NA	NA
AXE79096.1\|4735936_4736740_+	peptidase M23	NA	NA	NA	NA
AXE79097.1\|4736739_4738779_+	type IV secretion protein Rhs	NA	NA	NA	NA
AXE79098.1\|4738815_4739109_+	PaaR repeat-containing protein	NA	NA	NA	NA
AXE79099.1\|4739115_4739529_+\|plate	baseplate protein	A0A0E3F3H3	Synechococcus_phage	1.2e-10	33.3
AXE79100.1\|4739525_4741484_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA

DBSCAN-SWA_7

8772079 : 8858413

Burkholderia_virus(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE81995.1\|8772079_8773549_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.0e-35	32.6
AXE81996.1\|8773573_8774035_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXE81997.1\|8773934_8774381_-	hypothetical protein	Q8W6R2	Burkholderia_virus	2.4e-20	53.6
AXE81998.1\|8774355_8775753_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-34	36.2
AXE81999.1\|8775785_8776286_-	hypothetical protein	Q8W6R2	Burkholderia_virus	1.3e-38	52.8
AXE82000.1\|8776423_8776699_-	hypothetical protein	A0A2P1JR43	Mycobacterium_phage	7.8e-06	45.6
AXE82001.1\|8777070_8777616_-	hypothetical protein	NA	NA	NA	NA
AXE82002.1\|8777691_8778570_-	RNA polymerase subunit sigma-70	NA	NA	NA	NA
AXE82003.1\|8778664_8779114_+	alkylhydroperoxidase	NA	NA	NA	NA
AXE82004.1\|8779286_8780057_-	AAA family ATPase	U5N3V8	Enterobacteria_phage	3.6e-56	45.5
AXE83280.1\|8781684_8782104_-	hypothetical protein	NA	NA	NA	NA
AXE83281.1\|8783368_8784340_-	hypothetical protein	NA	NA	NA	NA
AXE82005.1\|8784348_8785182_-	hypothetical protein	NA	NA	NA	NA
AXE82006.1\|8785698_8786085_-	hypothetical protein	NA	NA	NA	NA
AXE82007.1\|8786387_8787470_+	hypothetical protein	NA	NA	NA	NA
AXE82008.1\|8788557_8788914_+	DUF5132 domain-containing protein	NA	NA	NA	NA
AXE82009.1\|8789084_8791379_+	ABC transporter	W8CYL7	Bacillus_phage	2.2e-40	30.7
AXE82010.1\|8791485_8815320_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.8e-142	25.5
AXE82011.1\|8815325_8815541_+	MbtH family protein	NA	NA	NA	NA
AXE82012.1\|8815551_8816802_+	cytochrome P450	NA	NA	NA	NA
AXE82013.1\|8816832_8817570_+	ATPase	NA	NA	NA	NA
AXE83282.1\|8817599_8817791_+	hypothetical protein	NA	NA	NA	NA
AXE82014.1\|8818154_8819369_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXE82015.1\|8819821_8821180_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXE82016.1\|8821176_8822220_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.6e-17	31.8
AXE83283.1\|8822234_8824094_-	peptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-13	33.0
AXE82017.1\|8824182_8825169_-	ABC transporter permease	NA	NA	NA	NA
AXE83284.1\|8825220_8826819_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE82018.1\|8826888_8828733_+	hypothetical protein	NA	NA	NA	NA
AXE82019.1\|8828987_8829371_+	DUF5132 domain-containing protein	NA	NA	NA	NA
AXE82020.1\|8829784_8830114_+	hypothetical protein	NA	NA	NA	NA
AXE82021.1\|8830149_8830353_+	hypothetical protein	NA	NA	NA	NA
AXE82022.1\|8830352_8831120_+	thioesterase	NA	NA	NA	NA
AXE82023.1\|8831073_8832513_+	hypothetical protein	NA	NA	NA	NA
AXE82024.1\|8833069_8833294_+	hypothetical protein	NA	NA	NA	NA
AXE82025.1\|8834677_8835742_+	hypothetical protein	NA	NA	NA	NA
AXE82026.1\|8836090_8837260_-	hypothetical protein	NA	NA	NA	NA
AXE83285.1\|8837266_8837464_-	hypothetical protein	NA	NA	NA	NA
AXE82027.1\|8837681_8838185_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXE83286.1\|8840226_8840610_+	hypothetical protein	NA	NA	NA	NA
AXE82028.1\|8840786_8841392_+	hypothetical protein	NA	NA	NA	NA
AXE83287.1\|8841354_8842140_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82029.1\|8842536_8843976_+\|transposase	transposase	NA	NA	NA	NA
AXE82030.1\|8844305_8844689_-	glyoxalase	NA	NA	NA	NA
AXE82031.1\|8845066_8845579_+	DDE endonuclease	NA	NA	NA	NA
AXE82032.1\|8845572_8846073_-	cupin	NA	NA	NA	NA
AXE83288.1\|8846318_8846735_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXE82033.1\|8847578_8847992_+	hypothetical protein	NA	NA	NA	NA
AXE82034.1\|8848130_8848406_+	hypothetical protein	NA	NA	NA	NA
AXE82035.1\|8851107_8852490_-	carotenoid oxygenase	NA	NA	NA	NA
AXE82036.1\|8852521_8853133_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXE82037.1\|8853952_8854255_+	hypothetical protein	NA	NA	NA	NA
AXE82038.1\|8854445_8855462_+	hypothetical protein	NA	NA	NA	NA
AXE82039.1\|8855961_8857213_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.2e-74	53.3
AXE83289.1\|8857489_8858413_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

8864188 : 8943895

Planktothrix_phage(50.0%)

transposase,integrase

attL 8899049:8899108|attR 8934944:8936663

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE82044.1\|8864188_8865022_-\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	1.2e-78	57.4
AXE82045.1\|8865259_8866699_+\|transposase	transposase	NA	NA	NA	NA
AXE82046.1\|8867174_8867720_+	hypothetical protein	NA	NA	NA	NA
AXE83290.1\|8867682_8868468_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82047.1\|8869636_8870470_-	GlcNAc-PI de-N-acetylase	NA	NA	NA	NA
AXE82048.1\|8870847_8871168_-	hypothetical protein	NA	NA	NA	NA
AXE83291.1\|8871321_8872167_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE83292.1\|8872390_8872864_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXE83293.1\|8873030_8874164_+\|transposase	IS630 family transposase	NA	NA	NA	NA
AXE83294.1\|8876531_8876978_-	hypothetical protein	NA	NA	NA	NA
AXE83295.1\|8878917_8879703_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82049.1\|8879665_8880205_-	hypothetical protein	NA	NA	NA	NA
AXE82050.1\|8880330_8881770_-\|transposase	transposase	NA	NA	NA	NA
AXE82051.1\|8882998_8883496_-	hypothetical protein	NA	NA	NA	NA
AXE82052.1\|8883956_8884472_-	hypothetical protein	NA	NA	NA	NA
AXE82053.1\|8884974_8888754_-	CHAT domain-containing protein	NA	NA	NA	NA
AXE82054.1\|8888883_8889228_+	hypothetical protein	NA	NA	NA	NA
AXE82055.1\|8889238_8890150_+	hypothetical protein	NA	NA	NA	NA
AXE82056.1\|8890492_8891212_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.9e-28	35.2
AXE82057.1\|8891505_8892378_+	alpha/beta hydrolase	NA	NA	NA	NA
AXE82058.1\|8892681_8893860_+	hypothetical protein	NA	NA	NA	NA
AXE82059.1\|8893862_8894954_+	esterase	NA	NA	NA	NA
AXE82060.1\|8895345_8895978_+	SMI1/KNR4 family protein	NA	NA	NA	NA
AXE83296.1\|8896029_8896512_+	DNA-binding protein	NA	NA	NA	NA
AXE82061.1\|8896606_8896795_+	hypothetical protein	NA	NA	NA	NA
AXE82062.1\|8897297_8897894_+	hypothetical protein	NA	NA	NA	NA
AXE82063.1\|8897811_8898768_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
8899049:8899108	attL	NA	NA	NA	NA
AXE82064.1\|8899148_8899745_+	hypothetical protein	NA	NA	NA	NA
AXE82065.1\|8899662_8900619_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82066.1\|8901755_8902841_+\|integrase	integrase	NA	NA	NA	NA
AXE82067.1\|8903686_8906263_-	ABC transporter permease	NA	NA	NA	NA
AXE82068.1\|8906253_8907036_-	ABC transporter	G9BWD6	Planktothrix_phage	6.5e-29	35.0
AXE82069.1\|8907744_8908464_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	4.6e-29	30.6
AXE82070.1\|8908673_8909210_+	hypothetical protein	NA	NA	NA	NA
AXE82071.1\|8910220_8910715_-	hypothetical protein	NA	NA	NA	NA
AXE82072.1\|8911490_8912357_+	hypothetical protein	NA	NA	NA	NA
AXE82073.1\|8912353_8917267_+	DNA-binding protein	NA	NA	NA	NA
AXE82074.1\|8917382_8918537_+	AAA family ATPase	NA	NA	NA	NA
AXE82075.1\|8918533_8922295_+	hypothetical protein	NA	NA	NA	NA
AXE82076.1\|8922291_8924163_+	hypothetical protein	NA	NA	NA	NA
AXE82077.1\|8925400_8925661_-	hypothetical protein	NA	NA	NA	NA
AXE82078.1\|8925728_8926490_-	hypothetical protein	NA	NA	NA	NA
AXE82079.1\|8926486_8927275_-	histidinol phosphatase	G9BWD6	Planktothrix_phage	1.7e-13	35.2
AXE82080.1\|8927271_8928327_-	iron ABC transporter	NA	NA	NA	NA
AXE82081.1\|8928323_8929310_-	hypothetical protein	NA	NA	NA	NA
AXE82082.1\|8930445_8931237_+	hypothetical protein	NA	NA	NA	NA
AXE82083.1\|8931994_8932282_+	hypothetical protein	NA	NA	NA	NA
AXE82084.1\|8932392_8933229_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXE82085.1\|8933319_8933820_+	cupin domain-containing protein	NA	NA	NA	NA
AXE82086.1\|8935043_8935640_+	hypothetical protein	NA	NA	NA	NA
AXE82087.1\|8935557_8936514_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82088.1\|8937385_8938069_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-30	39.7
8934944:8936663	attR	NA	NA	NA	NA
AXE82089.1\|8938068_8940237_+	permease	NA	NA	NA	NA
AXE82090.1\|8940580_8940847_+	hypothetical protein	NA	NA	NA	NA
AXE82091.1\|8941173_8941413_-	hypothetical protein	NA	NA	NA	NA
AXE83297.1\|8942761_8943895_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

8949160 : 9042888

Tupanvirus(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE83299.1\|8949160_8949949_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82097.1\|8951400_8952357_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82098.1\|8952274_8952871_-	hypothetical protein	NA	NA	NA	NA
AXE82099.1\|8953472_8956385_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AXE83300.1\|8956486_8956675_-	hypothetical protein	NA	NA	NA	NA
AXE82100.1\|8956830_8959950_-	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA
AXE82101.1\|8961021_8962017_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXE82102.1\|8962070_8970899_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	4.5e-171	28.0
AXE83301.1\|8971264_8971735_+	methylmalonyl-CoA mutase	NA	NA	NA	NA
AXE82103.1\|8971721_8973035_+	methylaspartate mutase	NA	NA	NA	NA
AXE82104.1\|8973104_8974121_+	asparagine ligase	NA	NA	NA	NA
AXE82105.1\|8974117_8975338_+	glutamate synthase	NA	NA	NA	NA
AXE83302.1\|8975334_8976282_+	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	3.5e-37	32.2
AXE82106.1\|8976322_8977330_+	2,3-diaminopropionate biosynthesis protein SbnB	NA	NA	NA	NA
AXE82107.1\|8977624_8981617_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	1.9e-76	25.9
AXE82108.1\|8981613_8989500_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	4.6e-90	26.1
AXE83303.1\|8989589_8996150_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	7.8e-152	26.1
AXE82109.1\|8996525_8997929_-	MFS transporter	NA	NA	NA	NA
AXE82110.1\|8997933_8998548_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AXE82111.1\|9001409_9002264_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.1e-24	32.8
AXE82112.1\|9002560_9002791_+	hypothetical protein	NA	NA	NA	NA
AXE82113.1\|9002808_9004071_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
AXE82114.1\|9004132_9004591_+	reverse transcriptase	NA	NA	NA	NA
AXE82115.1\|9005864_9006518_+	hypothetical protein	NA	NA	NA	NA
AXE82116.1\|9006918_9008358_+\|transposase	transposase	NA	NA	NA	NA
AXE82117.1\|9008471_9009314_+\|transposase	IS5/IS1182 family transposase	A0A0M5M147	Mycobacterium_phage	3.2e-82	58.2
AXE82118.1\|9009322_9010258_-	hypothetical protein	NA	NA	NA	NA
AXE82119.1\|9010637_9012851_+	hypothetical protein	NA	NA	NA	NA
AXE82120.1\|9013370_9014327_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
AXE82121.1\|9014244_9014841_-	hypothetical protein	NA	NA	NA	NA
AXE83304.1\|9015239_9016391_-	hypothetical protein	NA	NA	NA	NA
AXE82122.1\|9016516_9017935_-	proline-specific permease ProY	NA	NA	NA	NA
AXE83305.1\|9018047_9018506_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXE82123.1\|9018734_9020402_+	PucR family transcriptional regulator	NA	NA	NA	NA
AXE82124.1\|9020898_9023760_+	histidine kinase	A0A1J0MCT1	Streptomyces_phage	1.4e-09	43.9
AXE82125.1\|9025042_9025597_-	hypothetical protein	D7NW85	Streptomyces_phage	2.9e-07	37.1
AXE82126.1\|9025636_9025951_+	hypothetical protein	NA	NA	NA	NA
AXE82127.1\|9026019_9027495_+	D-glutamate deacylase	NA	NA	NA	NA
AXE83306.1\|9028680_9028917_-	hypothetical protein	NA	NA	NA	NA
AXE82128.1\|9029403_9030312_-	prepilin peptidase	NA	NA	NA	NA
AXE82129.1\|9030408_9031368_-	hypothetical protein	NA	NA	NA	NA
AXE82130.1\|9031364_9031706_-	PadR family transcriptional regulator	NA	NA	NA	NA
AXE82131.1\|9031832_9032144_+	hypothetical protein	NA	NA	NA	NA
AXE82132.1\|9032201_9032432_-	hypothetical protein	NA	NA	NA	NA
AXE82133.1\|9034679_9036281_+	peptide-N4-asparagine amidase A	NA	NA	NA	NA
AXE82134.1\|9036959_9037979_-	hypothetical protein	NA	NA	NA	NA
AXE82135.1\|9038035_9038512_-	hypothetical protein	NA	NA	NA	NA
AXE82136.1\|9038645_9039902_+	sensor histidine kinase	NA	NA	NA	NA
AXE82137.1\|9039889_9040534_+	DNA-binding response regulator	NA	NA	NA	NA
AXE83307.1\|9041470_9041659_-	hypothetical protein	NA	NA	NA	NA
AXE82138.1\|9041667_9042888_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

9548268 : 9594997

Streptomyces_phage(100.0%)

plate,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXE82453.1\|9548268_9551466_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
AXE82454.1\|9551462_9554255_-\|plate	putative baseplate assembly protein	A0A1J0GW37	Streptomyces_phage	9.7e-19	27.0
AXE83346.1\|9554251_9554614_-	hypothetical protein	NA	NA	NA	NA
AXE82455.1\|9554619_9554973_-	hypothetical protein	NA	NA	NA	NA
AXE82456.1\|9554980_9555475_-\|plate	baseplate assembly protein	NA	NA	NA	NA
AXE82457.1\|9555504_9556623_-	hypothetical protein	NA	NA	NA	NA
AXE82458.1\|9556622_9556949_-	hypothetical protein	NA	NA	NA	NA
AXE82459.1\|9556980_9557622_-	hypothetical protein	NA	NA	NA	NA
AXE82460.1\|9557631_9557823_-	hypothetical protein	NA	NA	NA	NA
AXE82461.1\|9557896_9559558_-	hypothetical protein	NA	NA	NA	NA
AXE82462.1\|9560576_9561308_-	hypothetical protein	NA	NA	NA	NA
AXE82463.1\|9561312_9561834_-\|tail	phage tail protein	NA	NA	NA	NA
AXE82464.1\|9561845_9563690_-	hypothetical protein	NA	NA	NA	NA
AXE82465.1\|9563888_9564083_-	hypothetical protein	NA	NA	NA	NA
AXE82466.1\|9564181_9564745_+	hypothetical protein	NA	NA	NA	NA
AXE82467.1\|9564766_9565996_+	hypothetical protein	NA	NA	NA	NA
AXE82468.1\|9566997_9567996_-	LacI family transcriptional regulator	NA	NA	NA	NA
AXE82469.1\|9568019_9569783_-	alpha-galactosidase	NA	NA	NA	NA
AXE82470.1\|9569779_9570646_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXE83347.1\|9570642_9571455_-	lactose ABC transporter permease	NA	NA	NA	NA
AXE82471.1\|9571565_9572915_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXE82472.1\|9573121_9575077_+	hypothetical protein	NA	NA	NA	NA
AXE82473.1\|9575736_9578271_-	hypothetical protein	NA	NA	NA	NA
AXE82474.1\|9580258_9581302_+	LuxR family transcriptional regulator	NA	NA	NA	NA
AXE82475.1\|9581502_9582723_-	hypothetical protein	NA	NA	NA	NA
AXE82476.1\|9583314_9583638_-	hypothetical protein	NA	NA	NA	NA
AXE83348.1\|9584202_9585159_-	hypothetical protein	NA	NA	NA	NA
AXE82477.1\|9586726_9588712_-	hypothetical protein	NA	NA	NA	NA
AXE82478.1\|9589217_9589871_+	hypothetical protein	NA	NA	NA	NA
AXE82479.1\|9590417_9590678_+	hypothetical protein	NA	NA	NA	NA
AXE83349.1\|9591269_9591746_+	DUF4262 domain-containing protein	NA	NA	NA	NA
AXE82480.1\|9591790_9593398_-\|transposase	transposase	NA	NA	NA	NA
AXE82481.1\|9593551_9594997_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP027306

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection