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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031091 Spiroplasma phoeniceum P40 plasmid pSPh245, complete sequence 0 crisprs NA 0 0 0 0
CP031088 Spiroplasma phoeniceum P40 chromosome, complete genome 0 crisprs cas4 0 0 29 0
CP031089 Spiroplasma phoeniceum P40 plasmid pSPh535, complete sequence 0 crisprs NA 0 0 0 0
CP031090 Spiroplasma phoeniceum P40 plasmid pSPh387, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP031088
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 52581 : 60053 10 Paenibacillus_phage(33.33%) terminase NA
DBSCAN-SWA_2 64411 : 97693 56 Spiroplasma_phage(63.16%) transposase NA
DBSCAN-SWA_3 196641 : 240836 57 Spiroplasma_virus(88.89%) transposase,integrase attL 240086:240145|attR 249168:249246
DBSCAN-SWA_4 255227 : 264565 16 Spiroplasma_virus(83.33%) transposase NA
DBSCAN-SWA_5 273011 : 278383 7 Spiroplasma_virus(71.43%) NA NA
DBSCAN-SWA_6 299060 : 310026 12 Spiroplasma_virus(77.78%) transposase,protease NA
DBSCAN-SWA_7 339064 : 343174 7 Spiroplasma_virus(100.0%) NA NA
DBSCAN-SWA_8 441826 : 447076 8 Spiroplasma_virus(85.71%) transposase NA
DBSCAN-SWA_9 463002 : 470413 12 Spiroplasma_virus(90.91%) NA NA
DBSCAN-SWA_10 562311 : 604073 57 Spiroplasma_virus(88.46%) integrase,tRNA,transposase attL 594112:594171|attR 597598:597707
DBSCAN-SWA_11 703640 : 720114 20 Spiroplasma_virus(75.0%) transposase,integrase attL 707815:707832|attR 717477:717494
DBSCAN-SWA_12 785905 : 801623 24 Spiroplasma_phage(77.78%) integrase,transposase attL 789089:789110|attR 793796:793817
DBSCAN-SWA_13 861231 : 868620 14 Spiroplasma_virus(100.0%) integrase attL 867454:867471|attR 874208:874225
DBSCAN-SWA_14 924569 : 934482 9 Clostridium_phage(33.33%) portal,terminase NA
DBSCAN-SWA_15 955833 : 963305 10 Paenibacillus_phage(33.33%) terminase NA
DBSCAN-SWA_16 982040 : 1009539 48 Spiroplasma_phage(74.36%) integrase attL 978599:978619|attR 1011437:1011457
DBSCAN-SWA_17 1023660 : 1028806 9 Spiroplasma_virus(87.5%) integrase attL 1015872:1015890|attR 1039365:1039383
DBSCAN-SWA_18 1075746 : 1089855 22 Spiroplasma_phage(58.82%) integrase attL 1075497:1075512|attR 1096245:1096260
DBSCAN-SWA_19 1107527 : 1119286 12 Spiroplasma_virus(90.91%) integrase attL 1105284:1105299|attR 1116159:1116174
DBSCAN-SWA_20 1234655 : 1241496 11 Spiroplasma_virus(87.5%) transposase NA
DBSCAN-SWA_21 1287249 : 1347701 58 Spiroplasma_virus(36.36%) integrase,tRNA,transposase,protease attL 1282577:1282636|attR 1352362:1352448
DBSCAN-SWA_22 1351690 : 1365446 25 Spiroplasma_virus(50.0%) integrase attL 1349883:1349899|attR 1368002:1368018
DBSCAN-SWA_23 1379688 : 1388089 11 Spiroplasma_virus(90.0%) integrase,transposase attL 1380899:1380935|attR 1383206:1383242
DBSCAN-SWA_24 1476098 : 1485497 14 Spiroplasma_virus(80.0%) tRNA NA
DBSCAN-SWA_25 1553527 : 1559085 8 Spiroplasma_virus(100.0%) NA NA
DBSCAN-SWA_26 1564833 : 1572303 7 Spiroplasma_virus(83.33%) transposase NA
DBSCAN-SWA_27 1630184 : 1635549 6 Spiroplasma_virus(83.33%) transposase,integrase attL 1628541:1628558|attR 1644202:1644219
DBSCAN-SWA_28 1738639 : 1747501 13 Spiroplasma_virus(90.0%) transposase NA
DBSCAN-SWA_29 1784390 : 1789584 14 Spiroplasma_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage