CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	0 crisprs	DEDDh	2
CP031135	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_1, complete sequence	0 crisprs	PD-DExK,csa3	17
CP031134	Escherichia coli strain CFSAN064035 chromosome, complete genome	0 crisprs	RT,DEDDh,c2c9_V-U4,WYL,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,cas6f,cas7f,cas5f,cas8f,cas3f	12
CP031139	Escherichia coli strain CFSAN064035 plasmid pGMI17-003, complete sequence	0 crisprs	NA	0
CP031138	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_4, complete sequence	0 crisprs	NA	0
CP031137	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_3, complete sequence	0 crisprs	NA	2

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 13464

Wolbachia_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20318.1\|1539_1716_+	hypothetical protein	NA	NA	NA	NA
AXG20319.1\|1963_4351_+	DUF4165 domain-containing protein	NA	NA	NA	NA
AXG20320.1\|4666_7123_+	DUF4165 domain-containing protein	NA	NA	NA	NA
AXG20321.1\|7625_8825_+	DUF4102 domain-containing protein	NA	NA	NA	NA
AXG20322.1\|8821_9889_+	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	3.7e-35	32.9
AXG20323.1\|10128_11376_-	hypothetical protein	NA	NA	NA	NA
AXG20324.1\|11664_13464_-	ATP-dependent helicase	S5M596	Bacillus_phage	1.8e-29	23.5

DBSCAN-SWA_2

18052 : 26702

Cronobacter_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20329.1\|18052_18883_+	DUF945 domain-containing protein	K4F5L3	Cronobacter_phage	8.4e-43	39.6
AXG20330.1\|18963_21030_+	chromosome partitioning protein ParB	G8DH78	Emiliania_huxleyi_virus	2.4e-22	26.8
AXG20331.1\|21840_22155_+	DUF736 domain-containing protein	NA	NA	NA	NA
AXG20332.1\|22251_22461_+	hypothetical protein	NA	NA	NA	NA
AXG20620.1\|22457_22751_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG20621.1\|23070_23421_+	DUF2958 domain-containing protein	A0A1W6DX76	Sphingobium_phage	1.3e-18	45.1
AXG20333.1\|23764_24532_+	DUF2285 domain-containing protein	NA	NA	NA	NA
AXG20334.1\|24644_24929_+	DNA-binding protein	NA	NA	NA	NA
AXG20622.1\|24955_25798_+	RepA replication protein	NA	NA	NA	NA
AXG20335.1\|25812_26067_+	hypothetical protein	NA	NA	NA	NA
AXG20336.1\|26063_26702_+	ATPase	B0ZSI1	Halomonas_phage	1.1e-31	40.1

DBSCAN-SWA_3

53944 : 57415

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20361.1\|53944_54337_-	DNA-binding protein	Q71TH9	Escherichia_phage	1.0e-43	62.6
AXG20362.1\|54329_54602_-	hypothetical protein	NA	NA	NA	NA
AXG20626.1\|55442_55946_+	hypothetical protein	NA	NA	NA	NA
AXG20363.1\|56533_57415_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	5.0e-54	41.3

DBSCAN-SWA_4

61903 : 63684

Cronobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20366.1\|61903_62608_-	hypothetical protein	M1EZB9	Cronobacter_phage	1.8e-17	27.9
AXG20367.1\|62686_62986_-	hypothetical protein	A0A2P1JU39	Erwinia_phage	9.4e-05	60.0
AXG20368.1\|63021_63276_-	hypothetical protein	NA	NA	NA	NA
AXG20369.1\|63327_63684_-	hypothetical protein	A0A076YMQ7	Citrobacter_phage	2.4e-07	42.3

DBSCAN-SWA_5

67541 : 72111

Caulobacter_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20375.1\|67541_67838_+	toxin-plasmid maintenance system killer protein	A0A222YWE2	Escherichia_phage	8.4e-06	36.2
AXG20376.1\|67846_69028_+	flavin reductase	NA	NA	NA	NA
AXG20377.1\|69418_69796_+	hypothetical protein	NA	NA	NA	NA
AXG20378.1\|69931_70366_+	hypothetical protein	NA	NA	NA	NA
AXG20379.1\|70366_70687_+	hypothetical protein	NA	NA	NA	NA
AXG20380.1\|70802_71438_+	hypothetical protein	K4JV11	Caulobacter_phage	1.9e-26	40.4
AXG20381.1\|71499_72111_+	hypothetical protein	K4JV11	Caulobacter_phage	5.2e-26	40.3

DBSCAN-SWA_6

81234 : 85991

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20391.1\|81234_81966_+	hypothetical protein	Q71T76	Escherichia_phage	7.3e-67	56.0
AXG20392.1\|81962_82271_+	hypothetical protein	NA	NA	NA	NA
AXG20629.1\|82304_82829_+	HNH endonuclease	C6ZR29	Salmonella_phage	2.8e-44	62.7
AXG20393.1\|82859_83468_+	hypothetical protein	NA	NA	NA	NA
AXG20394.1\|83623_83860_+	hypothetical protein	S4TRP7	Salmonella_phage	1.1e-05	40.3
AXG20395.1\|83893_84142_+	hypothetical protein	NA	NA	NA	NA
AXG20396.1\|84226_84607_+	hypothetical protein	NA	NA	NA	NA
AXG20397.1\|84806_85118_+	DUF957 domain-containing protein	NA	NA	NA	NA
AXG20398.1\|85122_85614_+	DUF3085 domain-containing protein	NA	NA	NA	NA
AXG20399.1\|85697_85991_+	hypothetical protein	I7B2L9	Escherichia_phage	2.4e-05	35.6

DBSCAN-SWA_7

91664 : 94441

Pectobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20410.1\|91664_92075_-	hypothetical protein	A0A2D2W6B4	Pectobacterium_phage	1.9e-11	45.1
AXG20411.1\|92074_92329_-	hypothetical protein	NA	NA	NA	NA
AXG20412.1\|92544_92739_+	hypothetical protein	NA	NA	NA	NA
AXG20413.1\|93235_94441_+	DNA-binding protein	A0A2P9HXK7	Yersinia_phage	4.5e-13	27.8

DBSCAN-SWA_8

99349 : 102862

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20421.1\|99349_100330_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	4.0e-185	98.8
AXG20422.1\|100558_100918_+	hypothetical protein	NA	NA	NA	NA
AXG20631.1\|100950_101664_-	NERD domain-containing protein	A0A2R2ZH57	Clostridioides_phage	3.4e-08	37.7
AXG20423.1\|101680_102862_-	S49 family peptidase	A0A2I6UG67	Salinibacter_virus	7.8e-10	29.5

DBSCAN-SWA_9

134665 : 143597

Acinetobacter_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20450.1\|134665_135745_-	hypothetical protein	A0A172Q0S8	Acinetobacter_phage	5.6e-39	34.4
AXG20451.1\|135746_136520_-	hypothetical protein	NA	NA	NA	NA
AXG20452.1\|136512_137655_-	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	2.5e-29	34.1
AXG20453.1\|137664_138723_-	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA
AXG20454.1\|139045_139627_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	5.3e-12	29.6
AXG20455.1\|139626_140784_+	tellurium resistance protein TerA	NA	NA	NA	NA
AXG20456.1\|140806_141262_+	Tellurite resistance protein TerB	NA	NA	NA	NA
AXG20457.1\|141284_142325_+	tellurium resistance protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
AXG20458.1\|142373_142952_+	tellurium resistance protein TerD	A0A2P1N0L4	Streptomyces_phage	1.5e-06	40.0
AXG20459.1\|143021_143597_+	tellurium resistance protein TerE	K4JRX3	Caulobacter_phage	5.6e-30	39.6

DBSCAN-SWA_10

148203 : 190939

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20463.1\|148203_149184_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	6.8e-185	98.5
AXG20464.1\|149315_150413_-	hypothetical protein	NA	NA	NA	NA
AXG20465.1\|150517_151042_-	hypothetical protein	NA	NA	NA	NA
AXG20466.1\|151374_151668_-	hypothetical protein	NA	NA	NA	NA
AXG20467.1\|151688_151988_-	hypothetical protein	NA	NA	NA	NA
AXG20468.1\|152051_152282_-	hypothetical protein	NA	NA	NA	NA
AXG20469.1\|152303_153251_-	hypothetical protein	NA	NA	NA	NA
AXG20470.1\|153247_153763_-	thermonuclease family protein	V5UN65	Mycobacterium_phage	3.2e-08	28.9
AXG20471.1\|153985_155413_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.5e-103	49.4
AXG20472.1\|155538_155709_+	hypothetical protein	A0A1P7WFU2	Pectobacterium_phage	2.3e-08	56.4
AXG20473.1\|155732_157052_+	DUF1173 family protein	NA	NA	NA	NA
AXG20474.1\|157065_157269_+	hypothetical protein	NA	NA	NA	NA
AXG20475.1\|157323_158544_-	hypothetical protein	NA	NA	NA	NA
AXG20634.1\|158546_159359_-	DUF4942 domain-containing protein	NA	NA	NA	NA
AXG20635.1\|159859_160525_+	hypothetical protein	NA	NA	NA	NA
AXG20476.1\|160562_161015_+	hypothetical protein	NA	NA	NA	NA
AXG20477.1\|161126_161531_+	DNA-binding protein	NA	NA	NA	NA
AXG20478.1\|162191_165200_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.2
AXG20479.1\|165359_165917_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.8e-39	46.1
AXG20480.1\|165933_166797_+	DUF4231 domain-containing protein	NA	NA	NA	NA
AXG20481.1\|166837_167242_-	hypothetical protein	NA	NA	NA	NA
AXG20482.1\|167518_167917_-	TIR domain-containing protein	NA	NA	NA	NA
AXG20636.1\|167921_169130_-	DUF4071 domain-containing protein	NA	NA	NA	NA
AXG20483.1\|169448_170009_+	hypothetical protein	NA	NA	NA	NA
AXG20484.1\|170020_170470_+	DNA-binding protein	NA	NA	NA	NA
AXG20485.1\|170531_170936_+	hypothetical protein	NA	NA	NA	NA
AXG20486.1\|171395_171860_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
AXG20487.1\|173923_174274_+	transcriptional regulator	NA	NA	NA	NA
AXG20488.1\|174565_175042_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AXG20489.1\|175156_175594_-	PaaI family thioesterase	NA	NA	NA	NA
AXG20490.1\|175754_176216_-	dinitrogenase iron-molybdenum cofactor	NA	NA	NA	NA
AXG20491.1\|176190_176511_-	DUF134 domain-containing protein	NA	NA	NA	NA
AXG20492.1\|176970_177975_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AXG20493.1\|178039_178567_-	cytochrome C	NA	NA	NA	NA
AXG20494.1\|178595_179306_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-31	38.3
AXG20495.1\|179307_180513_-	ABC transporter permease	NA	NA	NA	NA
AXG20496.1\|180509_181661_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXG20497.1\|181657_182266_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXG20498.1\|182453_183458_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXG20499.1\|184061_184391_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
AXG20500.1\|184371_184653_+	XRE family transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
AXG20501.1\|184930_185911_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.5e-184	98.5
AXG20502.1\|185949_186075_-	ABC transporter	NA	NA	NA	NA
AXG20503.1\|186227_186728_-	non-heme ferritin-like protein	NA	NA	NA	NA
AXG20504.1\|187054_187759_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXG20505.1\|188899_190939_+	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	4.6e-26	26.4

DBSCAN-SWA_11

202406 : 216088

Wolbachia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20517.1\|202406_203471_+	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	7.7e-33	31.3
AXG20518.1\|203822_204332_+	DNA repair protein RadC	A0A1B2LRS6	Wolbachia_phage	1.7e-17	34.8
AXG20638.1\|204398_206702_-	hypothetical protein	NA	NA	NA	NA
AXG20519.1\|207247_208075_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	1.6e-46	39.6
AXG20520.1\|208155_210225_+	chromosome partitioning protein ParB	G8DH78	Emiliania_huxleyi_virus	7.7e-21	26.1
AXG20521.1\|210286_210496_+	hypothetical protein	NA	NA	NA	NA
AXG20522.1\|210857_211253_-	hypothetical protein	NA	NA	NA	NA
AXG20523.1\|211271_211586_+	DUF736 domain-containing protein	NA	NA	NA	NA
AXG20524.1\|211898_212192_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG20525.1\|212479_212827_+	DUF2958 domain-containing protein	A0A1W6DX76	Sphingobium_phage	6.6e-18	46.8
AXG20526.1\|213169_213940_+	DUF2285 domain-containing protein	NA	NA	NA	NA
AXG20527.1\|214051_214336_+	DNA-binding protein	NA	NA	NA	NA
AXG20528.1\|214362_215208_+	RepA replication protein	NA	NA	NA	NA
AXG20529.1\|215222_215453_+	hypothetical protein	NA	NA	NA	NA
AXG20530.1\|215449_216088_+	ATPase	A0A2H4JGZ2	uncultured_Caudovirales_phage	3.5e-33	40.0

DBSCAN-SWA_12

221717 : 222539

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20538.1\|221717_222539_-	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	4.1e-10	29.1

DBSCAN-SWA_13

255801 : 257034

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20575.1\|255801_257034_-	hypothetical protein	A0A0H5AWB1	Pseudomonas_phage	4.6e-13	29.3

DBSCAN-SWA_14

264881 : 266690

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20584.1\|264881_266690_-	ATP-dependent helicase	S5MMD7	Bacillus_phage	9.7e-20	25.9

DBSCAN-SWA_15

282844 : 283768

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20595.1\|282844_283768_-	stbA family protein	A0A0A7NPX4	Enterobacteria_phage	6.4e-36	34.8

DBSCAN-SWA_16

287015 : 288020

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20600.1\|287015_288020_-	peptide transporter	A0A1I9KFW9	Aeromonas_phage	1.6e-11	31.1

DBSCAN-SWA_17

302781 : 309648

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20614.1\|302781_303657_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.0e-59	42.8
AXG20615.1\|304198_305272_+	hypothetical protein	A0A1P8DTT7	Salmonella_phage	2.9e-11	34.1
AXG20616.1\|305289_305490_+	hypothetical protein	NA	NA	NA	NA
AXG20617.1\|305486_306206_+	hypothetical protein	NA	NA	NA	NA
AXG20618.1\|306472_307294_+	hypothetical protein	NA	NA	NA	NA
AXG20643.1\|307308_308133_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.6e-44	37.8
AXG20619.1\|308493_309648_+	DNA-binding protein	A0A060D5B2	Salmonella_phage	3.1e-19	27.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP031134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 112757

142

Enterobacteria_phage(41.77%)

integrase,head,transposase,terminase,portal,lysis,tail,capsid

attL 27081:27115|attR 114191:114225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG15544.1\|468_744_+	hypothetical protein	NA	NA	NA	NA
AXG15545.1\|755_2348_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	6.9e-62	28.7
AXG15546.1\|2566_3487_+	transpeptidase	NA	NA	NA	NA
AXG15547.1\|3545_4664_-	anion transporter	NA	NA	NA	NA
AXG15548.1\|4660_5128_-	transcriptional regulator MntR	NA	NA	NA	NA
AXG15549.1\|5313_5442_+	manganase accumulation protein MntS	NA	NA	NA	NA
AXG15550.1\|5713_7297_+	phosphoethanolamine transferase OpgE	NA	NA	NA	NA
AXG15551.1\|7345_7861_-	outer membrane protein X	H6WZM8	Escherichia_phage	1.1e-16	33.8
AXG15552.1\|8213_9101_+	threonine/homoserine exporter RhtA	NA	NA	NA	NA
AXG15553.1\|9399_9903_+	DNA starvation/stationary phase protection protein	A0A222YYG6	Streptomyces_phage	4.9e-06	29.0
AXG15554.1\|10188_10380_+	hypothetical protein	NA	NA	NA	NA
AXG15555.1\|10306_11053_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXG15556.1\|11191_11851_+	glutamine ABC transporter permease	NA	NA	NA	NA
AXG15557.1\|11847_12570_+	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	2.5e-35	41.8
AXG15558.1\|12686_14912_+	moderate conductance mechanosensitive channel YbiO	NA	NA	NA	NA
AXG15559.1\|14908_15916_-	23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA	NA	NA	NA
AXG15560.1\|15966_16371_+	DUF1471 domain-containing protein	A0A1B2ICL8	Erwinia_phage	2.6e-05	51.0
AXG15561.1\|16634_18917_+	catecholate siderophore receptor Fiu	NA	NA	NA	NA
AXG15562.1\|18958_19636_+	PKHD-type hydroxylase	Q5GQB0	Synechococcus_phage	1.2e-18	30.1
AXG15563.1\|19709_19976_+	DksA/TraR family C4-type zinc finger protein	E5G6L7	Salmonella_phage	6.9e-07	45.6
AXG15564.1\|20240_20501_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXG15565.1\|20770_21751_+\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXG15566.1\|22031_23117_-	dehydrogenase	NA	NA	NA	NA
AXG15567.1\|23257_24220_-	DNA-binding protein YbiB	NA	NA	NA	NA
AXG15568.1\|24247_26398_-	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	7.4e-43	26.0
AXG15569.1\|26517_27000_+	NADAR family protein	A0A0H3TLU0	Faustovirus	1.5e-36	52.7
27081:27115	attL	NA	NA	NA	NA
AXG15570.1\|27259_28240_-\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXG15571.1\|28510_29875_-	ATP-dependent RNA helicase RhlE	A0A1V0SBR7	Catovirus	1.5e-52	31.8
AXG20111.1\|30103_30775_+	transcriptional regulator	NA	NA	NA	NA
AXG15572.1\|30774_31773_+	secretion protein HlyD	NA	NA	NA	NA
AXG15573.1\|31765_33502_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.3e-18	29.8
AXG15574.1\|33494_34628_+	inner membrane transport permease YbhS	NA	NA	NA	NA
AXG15575.1\|34638_35745_+	inner membrane transport permease YbhR	NA	NA	NA	NA
AXG15576.1\|35706_36117_-	hypothetical protein	NA	NA	NA	NA
AXG15577.1\|36249_37011_+	EEP domain-containing protein	NA	NA	NA	NA
AXG15578.1\|37007_38249_+	cardiolipin synthase B	NA	NA	NA	NA
AXG15579.1\|38248_39205_+	UPF0104 family protein	NA	NA	NA	NA
AXG15580.1\|39240_39954_-	BAX inhibitor (BI)-1/YccA family protein	NA	NA	NA	NA
AXG15581.1\|40158_40863_-	BAX inhibitor (BI)-1/YccA family protein	NA	NA	NA	NA
AXG15582.1\|40999_41452_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
AXG15583.1\|41453_41699_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
AXG15584.1\|41691_42177_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA
AXG15585.1\|42179_42692_-	molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
AXG15586.1\|42713_43703_-	cyclic pyranopterin monophosphate synthase	NA	NA	NA	NA
AXG15587.1\|44099_45008_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.4e-27	31.1
AXG15588.1\|45199_47221_-	excinuclease ABC subunit B	NA	NA	NA	NA
AXG15589.1\|47799_48477_-	ATP-dependent dethiobiotin synthetase BioD	NA	NA	NA	NA
AXG15590.1\|48469_49225_-	malonyl-ACP O-methyltransferase BioC	NA	NA	NA	NA
AXG15591.1\|49211_50366_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AXG15592.1\|50362_51403_-	biotin synthase	NA	NA	NA	NA
AXG15593.1\|51489_52779_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	5.0e-18	29.0
AXG15594.1\|52837_53314_+	kinase inhibitor	NA	NA	NA	NA
AXG15595.1\|53228_53408_+	hypothetical protein	NA	NA	NA	NA
AXG15596.1\|54059_55391_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.5e-20	37.1
AXG15597.1\|55464_56049_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.6e-104	94.3
AXG15598.1\|56048_59120_-\|tail	phage tail protein	U5N099	Enterobacteria_phage	1.9e-68	82.1
AXG15599.1\|59184_59784_-	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	2.4e-108	97.0
AXG15600.1\|59854_63352_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.8
AXG15601.1\|63412_64084_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	9.9e-103	90.1
AXG15602.1\|63981_64725_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.4e-145	95.5
AXG15603.1\|64730_65429_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	2.3e-134	100.0
AXG15604.1\|65428_65758_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AXG15605.1\|65754_68316_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	91.8
AXG15606.1\|68308_68743_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	6.9e-65	100.0
AXG15607.1\|68724_69147_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.2e-60	85.7
AXG20112.1\|69162_69903_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	5.7e-128	96.7
AXG15608.1\|69910_70306_-\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	8.5e-70	98.5
AXG15609.1\|70302_70881_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.5
AXG15610.1\|70892_71246_-\|tail	phage tail protein	A0A2R9YJJ5	Escherichia_phage	6.4e-61	97.4
AXG15611.1\|71257_71653_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	1.1e-58	95.5
AXG15612.1\|72268_73249_-\|transposase	IS110 family transposase IS621	NA	NA	NA	NA
AXG15613.1\|74054_74387_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	1.7e-55	100.0
AXG15614.1\|74396_75716_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.4e-230	97.7
AXG15615.1\|76892_77168_-	hypothetical protein	NA	NA	NA	NA
AXG15616.1\|77285_77567_-	hypothetical protein	NA	NA	NA	NA
AXG15617.1\|77578_78121_-\|terminase	terminase	O64316	Escherichia_phage	4.9e-36	47.5
AXG15618.1\|78120_78330_-	hypothetical protein	NA	NA	NA	NA
AXG15619.1\|78322_78706_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXG15620.1\|78717_79059_-\|head	head decoration protein	NA	NA	NA	NA
AXG15621.1\|79068_80109_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.0e-66	42.2
AXG15622.1\|80326_80776_-	single-stranded DNA-binding protein	NA	NA	NA	NA
AXG15623.1\|80772_81024_-	hypothetical protein	NA	NA	NA	NA
AXG15624.1\|81020_81269_-	hypothetical protein	NA	NA	NA	NA
AXG15625.1\|81225_82641_-	DNA primase	A0A2H4JFA4	uncultured_Caudovirales_phage	6.9e-114	58.2
AXG15626.1\|82637_82937_-	DUF4222 domain-containing protein	NA	NA	NA	NA
AXG15627.1\|82943_83162_-	hypothetical protein	NA	NA	NA	NA
AXG15628.1\|83151_83364_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	6.7e-05	42.4
AXG15629.1\|83356_83593_-	hypothetical protein	NA	NA	NA	NA
AXG15630.1\|83582_84500_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
AXG15631.1\|84531_85110_-	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.2e-56	63.0
AXG15632.1\|85166_85424_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXG15633.1\|85425_86667_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.6e-93	42.9
AXG15634.1\|86815_87697_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	8.6e-163	99.3
AXG15635.1\|87693_87900_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
AXG15636.1\|87896_89822_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.1
AXG15637.1\|89796_90342_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.8e-94	98.9
AXG20113.1\|90481_90625_-	DNA-packaging protein	NA	NA	NA	NA
AXG15638.1\|90730_90964_+	DUF3950 domain-containing protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
AXG15639.1\|91020_91431_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
AXG15640.1\|91476_91641_+	hypothetical protein	NA	NA	NA	NA
AXG15641.1\|91717_91975_-	hypothetical protein	A0A0P0ZBT1	Stx2-converting_phage	5.0e-39	100.0
AXG15642.1\|91971_92469_-	DNA-binding protein	A0A220NRM9	Escherichia_phage	1.1e-93	100.0
AXG15643.1\|92670_93129_-\|lysis	lysis protein	K7PJW6	Enterobacteria_phage	6.2e-72	95.4
AXG15644.1\|93125_93623_-	lysozyme RrrD	A0A291AWW2	Escherichia_phage	2.7e-89	97.0
AXG15645.1\|93622_93838_-\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	1.2e-33	98.6
AXG15646.1\|94025_94613_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXG15647.1\|94621_94756_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXG15648.1\|95107_96067_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
AXG15649.1\|96259_96784_+	hypothetical protein	A0A1W6JNX6	Morganella_phage	1.1e-48	54.1
AXG15650.1\|96939_97317_-	antitermination protein	Q777W5	Enterobacteria_phage	7.3e-55	84.2
AXG15651.1\|97402_97543_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
AXG15652.1\|97539_97902_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	7.3e-60	96.5
AXG15653.1\|97921_98116_-	protein ninF	NA	NA	NA	NA
AXG15654.1\|98108_98492_-	DUF2591 domain-containing protein	Q76H72	Enterobacteria_phage	1.7e-62	96.5
AXG15655.1\|98452_98629_-	NinE family protein	K7PHE6	Enterobacteria_phage	1.4e-27	98.3
AXG15656.1\|98625_99153_-	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
AXG15657.1\|99149_99608_-	recombination protein NinB	A0A220NRM1	Escherichia_phage	7.3e-81	100.0
AXG15658.1\|99663_99954_-	protein ren	A0A1I9LJP5	Stx_converting_phage	6.3e-46	99.0
AXG15659.1\|99950_100652_-	Replication protein P	K7P6G2	Enterobacteria_phage	9.9e-130	100.0
AXG15660.1\|100648_101548_-	Replication protein O	A0A0K2FJ31	Enterobacteria_phage	5.5e-173	99.7
AXG15661.1\|101580_101874_-	hypothetical protein	A2SY75	Escherichia_phage	4.8e-46	99.0
AXG15662.1\|101992_102193_-	hypothetical protein	A4KWT7	Enterobacteria_phage	4.3e-30	100.0
AXG15663.1\|102293_103007_+	LexA family transcriptional regulator	A4KWS0	Enterobacteria_phage	1.1e-131	100.0
AXG15664.1\|103057_103492_+	hypothetical protein	A4KWT5	Enterobacteria_phage	6.0e-77	99.3
AXG15665.1\|105313_105637_+	antitermination protein	K7P718	Enterobacteria_phage	4.2e-51	98.1
AXG15666.1\|105629_106124_-	hypothetical protein	K7P861	Enterobacteria_phage	1.4e-85	99.4
AXG15667.1\|106333_106534_+	restriction endonuclease	A0A0K2FJE6	Enterobacteria_phage	4.2e-33	98.5
AXG15668.1\|106716_107085_+	DUF2528 family protein	K7PGR6	Enterobacteria_phage	6.5e-64	97.5
AXG15669.1\|107164_107434_+	host cell division inhibitory peptide Kil	G3CFI2	Escherichia_phage	1.3e-42	100.0
AXG15670.1\|107388_107805_+	Host-nuclease inhibitor protein gam	C6ZCV5	Enterobacteria_phage	2.8e-71	97.1
AXG15671.1\|107810_108596_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
AXG15672.1\|108592_109273_+	exonuclease	A0A0N6WET1	Escherichia_phage	1.6e-132	100.0
AXG20114.1\|109269_109452_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	4.3e-29	100.0
AXG15673.1\|109424_109616_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
AXG15674.1\|109626_109908_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	2.5e-47	100.0
AXG15675.1\|110006_110228_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	8.4e-35	98.6
AXG15676.1\|110438_110969_-	hypothetical protein	NA	NA	NA	NA
AXG15677.1\|110859_111111_-	hypothetical protein	NA	NA	NA	NA
AXG15678.1\|111165_111351_-	hypothetical protein	NA	NA	NA	NA
AXG15679.1\|111283_111451_+	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
AXG15680.1\|111490_111709_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
AXG15681.1\|111686_112757_+\|integrase	integrase	Q9MCR4	Enterobacteria_phage	5.1e-202	100.0
114191:114225	attR	NA	NA	NA	NA

DBSCAN-SWA_2

579855 : 676295

107

Shigella_phage(47.54%)

integrase,head,portal,terminase,plate,lysis,tail,holin,capsid,protease

attL 630002:630048|attR 672393:672439

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG16105.1\|579855_581889_-\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
AXG20127.1\|581885_582101_-	hypothetical protein	NA	NA	NA	NA
AXG16106.1\|582017_582605_+	transcriptional regulator	NA	NA	NA	NA
AXG16107.1\|582618_584091_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
AXG16108.1\|584104_585775_+\|holin	oxygen-dependent choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
AXG16109.1\|586627_586825_+	universal stress protein	NA	NA	NA	NA
AXG16110.1\|586731_586944_+	hypothetical protein	NA	NA	NA	NA
AXG16111.1\|586898_587594_-	lactate utilization protein C	NA	NA	NA	NA
AXG16112.1\|587586_589014_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
AXG16113.1\|589024_589744_-	(Fe-S)-binding protein	NA	NA	NA	NA
AXG16114.1\|590270_591125_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXG16115.1\|591350_592676_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-113	47.8
AXG16116.1\|592784_593021_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXG16117.1\|593032_593626_+	protein RclC	NA	NA	NA	NA
AXG16118.1\|593789_594671_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.7e-52	41.4
AXG16119.1\|594871_595762_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXG16120.1\|595882_600136_-	intimin-like adhesin FdeC	NA	NA	NA	NA
AXG16121.1\|601251_601353_+	hypothetical protein	NA	NA	NA	NA
AXG16122.1\|601715_601979_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
AXG16123.1\|601978_602119_+	50S ribosomal protein L36	NA	NA	NA	NA
AXG16124.1\|602153_602381_-	hypothetical protein	NA	NA	NA	NA
AXG16125.1\|603155_603746_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXG16126.1\|603820_604408_+	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
AXG16127.1\|604465_605134_+	hypothetical protein	NA	NA	NA	NA
AXG16128.1\|605159_607685_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AXG16129.1\|607674_609318_+	hypothetical protein	NA	NA	NA	NA
AXG16130.1\|609286_609997_+	hypothetical protein	NA	NA	NA	NA
AXG16131.1\|610309_610639_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
AXG16132.1\|610633_610813_-	hypothetical protein	NA	NA	NA	NA
AXG16133.1\|611611_611737_+	transporter	NA	NA	NA	NA
AXG16134.1\|611916_612606_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
AXG16135.1\|612602_613559_+	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA
AXG16136.1\|613555_615754_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	A0A0P0I429	Acinetobacter_phage	2.5e-38	25.8
AXG16137.1\|615763_616720_+	XdhC family protein	NA	NA	NA	NA
AXG16138.1\|616698_617109_+	transcriptional regulator	NA	NA	NA	NA
AXG16139.1\|617638_618736_-	hypothetical protein	NA	NA	NA	NA
AXG16140.1\|618829_621163_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	72.4
AXG16141.1\|621177_621501_-	DNA replication protein	NA	NA	NA	NA
AXG16142.1\|621497_621722_-	hypothetical protein	NA	NA	NA	NA
AXG16143.1\|621721_622270_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.0e-25	56.9
AXG16144.1\|622266_622527_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	1.3e-23	65.1
AXG16145.1\|622971_623184_-	hypothetical protein	NA	NA	NA	NA
AXG16146.1\|623430_624183_+	septation initiation protein	NA	NA	NA	NA
AXG16147.1\|624179_624734_+	phage polarity suppression protein	NA	NA	NA	NA
AXG16148.1\|624735_625008_+	hypothetical protein	NA	NA	NA	NA
AXG16149.1\|627462_628659_-	hypothetical protein	NA	NA	NA	NA
AXG16150.1\|628660_629839_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	1.7e-145	62.6
630002:630048	attL	NA	NA	NA	NA
AXG16151.1\|630113_630266_-	hypothetical protein	NA	NA	NA	NA
AXG16152.1\|630397_631828_-	hypothetical protein	NA	NA	NA	NA
AXG16153.1\|631892_632090_-	hypothetical protein	NA	NA	NA	NA
AXG16154.1\|632444_633722_-	DUF2254 domain-containing protein	NA	NA	NA	NA
AXG16155.1\|633785_635789_-\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	2.2e-20	25.9
AXG16156.1\|636410_637184_+	hypothetical protein	G9IA57	Pseudomonas_phage	1.1e-36	38.9
AXG16157.1\|637734_638802_+	acyltransferase	NA	NA	NA	NA
AXG16158.1\|639062_639479_-\|tail	phage tail protein	U5P0S4	Shigella_phage	2.9e-20	71.6
AXG16159.1\|639478_640405_-	carbohydrate kinase	U5P0I1	Shigella_phage	3.5e-50	84.3
AXG16160.1\|640408_640993_-	DUF2313 domain-containing protein	O22003	Shigella_phage	1.4e-113	99.5
AXG16161.1\|640983_642042_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	7.5e-198	97.4
AXG16162.1\|642028_642457_-\|tail	phage tail protein	U5P0R9	Shigella_phage	2.3e-81	100.0
AXG16163.1\|642453_643002_-\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	2.4e-94	96.7
AXG16164.1\|643001_644081_-\|plate	baseplate protein	Q8SBG7	Shigella_phage	2.6e-206	99.4
AXG16165.1\|644077_645448_-	DNA circularization protein	S5FUX4	Shigella_phage	3.8e-250	97.1
AXG16166.1\|645466_647302_-\|tail	phage tail tape measure protein	S5FM63	Shigella_phage	1.1e-305	99.2
AXG16167.1\|647294_647477_-	hypothetical protein	NA	NA	NA	NA
AXG16168.1\|647443_647713_-\|tail	phage tail assembly protein	S5FNR3	Shigella_phage	3.5e-43	100.0
AXG16169.1\|647712_648069_-\|tail	phage tail protein	U5P076	Shigella_phage	5.3e-63	100.0
AXG16170.1\|648068_649565_-\|tail	phage tail protein	S5FKL0	Shigella_phage	2.3e-277	99.6
AXG16171.1\|649548_649719_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
AXG16172.1\|649727_650288_-	hypothetical protein	S5FM61	Shigella_phage	4.7e-106	100.0
AXG16173.1\|650284_650791_-	hypothetical protein	Q8SBH5	Shigella_phage	2.9e-83	92.9
AXG16174.1\|650765_651176_-\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	5.7e-69	93.4
AXG16175.1\|651172_651496_-\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	2.2e-52	99.1
AXG16176.1\|651574_652804_-\|capsid	phage major capsid protein	Q8SBH8	Shigella_phage	1.5e-226	99.8
AXG16177.1\|652814_653417_-\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	6.8e-111	100.0
AXG16178.1\|653409_654636_-\|portal	phage portal protein	Q8SBI0	Shigella_phage	4.6e-239	98.5
AXG16179.1\|654783_656517_-\|terminase	terminase large subunit	U5P0Q5	Shigella_phage	0.0e+00	97.3
AXG16180.1\|656513_657017_-\|terminase	phage terminase small subunit P27 family	A0A1B3B2F4	Salmonella_phage	5.2e-88	99.4
AXG16181.1\|657133_657484_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	7.0e-60	92.2
AXG16182.1\|657757_658255_-	DNA-binding protein	Q9AZ05	Salmonella_phage	1.1e-87	95.7
AXG16183.1\|658446_658821_-	hypothetical protein	M1FPD9	Enterobacteria_phage	2.7e-49	79.8
AXG16184.1\|658859_659327_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	7.7e-54	74.3
AXG16185.1\|659310_659787_-	lysozyme	S5FV07	Shigella_phage	2.4e-87	97.5
AXG16186.1\|659790_660117_-\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	1.2e-56	99.1
AXG16187.1\|660414_661746_+	NTPase	R9TRQ8	Vibrio_phage	3.2e-20	29.4
AXG16188.1\|661774_662143_-	antitermination protein Q	A5LH77	Enterobacteria_phage	2.7e-54	86.7
AXG16189.1\|662157_663147_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.6e-194	99.4
AXG16190.1\|663154_663964_-	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	5.3e-151	99.6
AXG16191.1\|663983_664373_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	6.0e-68	98.4
AXG16192.1\|664369_664696_-	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	2.9e-52	98.1
AXG16193.1\|664692_665346_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	3.3e-127	99.1
AXG16194.1\|665345_665840_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	1.5e-87	99.4
AXG16195.1\|665836_666778_-	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	1.6e-143	99.4
AXG16196.1\|666767_666947_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.1e-13	66.7
AXG20128.1\|667122_667674_-	hypothetical protein	S5FXP0	Shigella_phage	7.6e-101	98.9
AXG16197.1\|667711_667912_-	cell division protein	NA	NA	NA	NA
AXG16198.1\|668009_668636_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	5.5e-47	48.8
AXG16199.1\|668821_669118_+	hypothetical protein	Q8SBF7	Shigella_phage	1.2e-52	100.0
AXG16200.1\|669035_669281_-	hypothetical protein	NA	NA	NA	NA
AXG16201.1\|669421_669646_-	hypothetical protein	A0A291AWX8	Escherichia_phage	1.1e-13	64.6
AXG16202.1\|669794_670331_+	HD family hydrolase	U5P0T3	Shigella_phage	4.8e-100	99.4
AXG16203.1\|670321_670684_+	hypothetical protein	U5P092	Shigella_phage	2.1e-67	100.0
AXG16204.1\|670683_670989_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
AXG16205.1\|670988_671339_+	DNA-binding protein	U5P4J3	Shigella_phage	4.9e-61	100.0
AXG20129.1\|671440_672379_+\|integrase	site-specific integrase	U5P434	Shigella_phage	4.7e-183	99.7
AXG16206.1\|672583_673837_-	gamma-glutamyl-phosphate reductase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.2
672393:672439	attR	NA	NA	NA	NA
AXG16207.1\|673848_674952_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
AXG16208.1\|675239_676295_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	9.1e-119	61.1

DBSCAN-SWA_3

708458 : 770823

Shigella_phage(11.11%)

transposase,protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG16238.1\|708458_708872_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AXG16239.1\|708875_710585_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AXG16240.1\|710577_711791_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1
AXG16241.1\|711950_713033_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXG16242.1\|713057_714338_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
AXG16243.1\|714334_714859_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AXG16244.1\|714861_716193_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AXG16245.1\|716197_716959_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AXG16246.1\|716967_719781_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	6.9e-81	28.0
AXG16247.1\|719777_720521_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
AXG16248.1\|720459_721938_+	type VI secretion system protein TssA	NA	NA	NA	NA
AXG16249.1\|722016_725481_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
AXG16250.1\|725491_726844_+	hypothetical protein	NA	NA	NA	NA
AXG16251.1\|726867_727350_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
AXG16252.1\|727393_728308_+	hypothetical protein	NA	NA	NA	NA
AXG16253.1\|728317_728797_+	hypothetical protein	NA	NA	NA	NA
AXG16254.1\|728933_729719_-	hypothetical protein	NA	NA	NA	NA
AXG16255.1\|730138_730318_+	hypothetical protein	NA	NA	NA	NA
AXG20131.1\|730257_730989_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	3.4e-40	39.0
AXG16256.1\|731053_731521_+	ribonuclease HI	J9Q745	Salmonella_phage	2.3e-50	62.4
AXG16257.1\|731517_732240_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AXG16258.1\|732273_733029_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AXG16259.1\|733100_734459_+	lytic transglycosylase	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
AXG16260.1\|734506_735277_-	SAM-dependent methyltransferase	NA	NA	NA	NA
AXG16261.1\|735354_736155_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
AXG16262.1\|736395_737310_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXG16263.1\|737306_738110_-	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	1.6e-38	36.1
AXG16264.1\|744006_744582_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AXG16265.1\|744769_745801_+	methionine import ATP-binding protein MetN	G9BWD6	Planktothrix_phage	7.2e-36	40.2
AXG16266.1\|745793_746447_+	methionine ABC transporter	NA	NA	NA	NA
AXG16267.1\|746486_747302_+	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
AXG16268.1\|747419_747824_+	Rcs stress response system protein RcsF	NA	NA	NA	NA
AXG16269.1\|747820_748528_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
AXG16270.1\|748638_750357_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
AXG16271.1\|750410_751235_+	endopeptidase	NA	NA	NA	NA
AXG16272.1\|751389_752100_-	copper homeostasis/adhesion lipoprotein NlpE	NA	NA	NA	NA
AXG16273.1\|752113_752536_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXG16274.1\|752532_753078_-	hypothetical protein	NA	NA	NA	NA
AXG16275.1\|753243_753444_+	hypothetical protein	NA	NA	NA	NA
AXG20132.1\|753436_753691_+	protein rof	NA	NA	NA	NA
AXG16276.1\|753739_755038_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AXG16277.1\|755102_755492_-	VOC family protein	NA	NA	NA	NA
AXG16278.1\|755548_757690_-	lysine decarboxylase LdcC	NA	NA	NA	NA
AXG16279.1\|757788_758748_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AXG16280.1\|758760_762243_-	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
AXG16281.1\|762279_762876_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.0e-26	39.9
AXG16282.1\|762872_764021_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
AXG16283.1\|764020_764809_-	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA
AXG16284.1\|764812_765268_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA
AXG16285.1\|765372_766398_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
AXG16286.1\|766401_766887_-	chaperone protein Skp	NA	NA	NA	NA
AXG16287.1\|767008_769441_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
AXG16288.1\|769470_770823_-\|protease	zinc metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_4

2746276 : 2755625

Acinetobacter_phage(25.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18103.1\|2746276_2746705_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
AXG18104.1\|2746708_2747245_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
AXG18105.1\|2747225_2748305_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXG18106.1\|2748268_2750029_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AXG18107.1\|2750104_2750509_-	hypothetical protein	NA	NA	NA	NA
AXG18108.1\|2750588_2751011_-	hypothetical protein	NA	NA	NA	NA
AXG18109.1\|2751104_2752266_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
AXG18110.1\|2752368_2752563_-	hypothetical protein	NA	NA	NA	NA
AXG18111.1\|2753111_2754092_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.6e-184	98.8
AXG20215.1\|2754129_2754255_-	sugar kinase	Q6QLL3	Human_immunodeficiency_virus	1.7e-13	87.8
AXG18112.1\|2754411_2755625_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	8.3e-100	57.1

DBSCAN-SWA_5

2853728 : 2860868

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18198.1\|2853728_2854367_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AXG18199.1\|2854363_2855626_-	3-oxo-tetronate kinase	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
AXG18200.1\|2855622_2856531_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AXG18201.1\|2856726_2857494_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
AXG18202.1\|2857544_2858201_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	1.1e-50	47.9
AXG18203.1\|2858306_2860868_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.3e-30	20.6

DBSCAN-SWA_6

2930739 : 3022026

100

Enterobacteria_phage(35.48%)

transposase,terminase,portal,lysis,holin,tail,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18269.1\|2930739_2931901_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
AXG18270.1\|2932053_2933772_+	ATP-binding protein	A0A1B5FPD5	Escherichia_phage	3.2e-307	99.8
AXG18271.1\|2933773_2935522_+	hypothetical protein	A0A1B5FPH1	Escherichia_phage	0.0e+00	99.8
AXG18272.1\|2935593_2936010_-	hypothetical protein	A0A1B5FPM5	Escherichia_phage	1.1e-72	100.0
AXG20220.1\|2936048_2937278_-	DUF4102 domain-containing protein	A0A1B5FPC6	Escherichia_phage	1.5e-234	100.0
AXG18273.1\|2937614_2938538_+	hypothetical protein	NA	NA	NA	NA
AXG18274.1\|2938530_2938872_+	DUF4325 domain-containing protein	NA	NA	NA	NA
AXG18275.1\|2938873_2939503_+	hypothetical protein	NA	NA	NA	NA
AXG18276.1\|2939515_2940682_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	2.8e-145	66.2
AXG18277.1\|2940642_2940849_-	excisionase	I6PBM8	Cronobacter_phage	6.9e-23	70.3
AXG18278.1\|2940890_2941757_-	hypothetical protein	NA	NA	NA	NA
AXG18279.1\|2941865_2942390_-	HD family hydrolase	S5MW55	Escherichia_phage	1.7e-94	97.1
AXG18280.1\|2942518_2943343_-	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
AXG18281.1\|2943408_2943771_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
AXG18282.1\|2943843_2944038_+	hypothetical protein	A0A291AWX8	Escherichia_phage	7.1e-30	96.9
AXG18283.1\|2944139_2944343_-	hypothetical protein	A0A291AWY6	Escherichia_phage	1.9e-12	94.9
AXG18284.1\|2944439_2945114_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	6.0e-132	99.6
AXG18285.1\|2945204_2945405_+	transcriptional regulator	U5P445	Shigella_phage	7.9e-32	100.0
AXG18286.1\|2945448_2946000_+	hypothetical protein	A0A291AWW8	Escherichia_phage	4.5e-101	100.0
AXG18287.1\|2945996_2946833_+	ash family protein	Q8SBF3	Shigella_phage	6.0e-150	98.9
AXG20221.1\|2946837_2947062_+	hypothetical protein	A0A291AX25	Escherichia_phage	8.5e-35	95.9
AXG18288.1\|2947058_2947877_+	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	3.1e-122	99.6
AXG18289.1\|2947873_2948368_+	PerC family transcriptional regulator	U5P0U0	Shigella_phage	2.1e-86	97.0
AXG18290.1\|2948367_2949021_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
AXG18291.1\|2949017_2949344_+	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	9.2e-54	100.0
AXG18292.1\|2949340_2949730_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.6e-68	99.2
AXG18293.1\|2949749_2950559_+	KilA-N domain-containing protein	Q8SBE6	Shigella_phage	8.2e-152	98.5
AXG18294.1\|2950566_2951556_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	8.1e-194	99.1
AXG18295.1\|2951573_2951939_+	antitermination protein	Q777W5	Enterobacteria_phage	1.6e-54	82.6
AXG18296.1\|2952023_2952470_-	hypothetical protein	NA	NA	NA	NA
AXG18297.1\|2952740_2952944_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
AXG18298.1\|2953094_2954147_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.3e-207	99.4
AXG18299.1\|2954214_2954430_+\|holin	holin	A5LH82	Enterobacteria_phage	4.5e-33	97.2
AXG18300.1\|2954434_2954785_+	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	1.6e-35	94.0
AXG18301.1\|2954848_2955382_+	lysozyme	Q08J98	Stx2-converting_phage	3.6e-100	94.4
AXG18302.1\|2955378_2955846_+\|lysis	lysis protein	K7PH77	Enterobacteria_phage	2.9e-77	100.0
AXG18303.1\|2955833_2955986_+	hypothetical protein	K7PKL2	Enterobacteria_phage	4.7e-21	96.0
AXG18304.1\|2956302_2956503_+	hypothetical protein	K7PJR7	Enterobacteria_phage	1.3e-31	92.4
AXG18305.1\|2956671_2957163_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.5e-68	84.1
AXG18306.1\|2957162_2959265_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	97.4
AXG18307.1\|2959261_2959474_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AXG18308.1\|2959473_2960982_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	3.5e-289	99.6
AXG18309.1\|2960926_2962954_+\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
AXG18310.1\|2962995_2963364_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	9.7e-52	100.0
AXG18311.1\|2963356_2963632_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
AXG18312.1\|2963643_2964222_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.6e-101	98.4
AXG18313.1\|2964218_2964620_+\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
AXG18314.1\|2964631_2965375_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	3.0e-132	99.6
AXG20222.1\|2965435_2965822_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.1e-65	99.2
AXG18315.1\|2965830_2966160_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AXG18316.1\|2966131_2969197_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.2
AXG18317.1\|2969196_2969526_+\|tail	phage tail protein	A0A291AWW9	Escherichia_phage	1.7e-60	99.1
AXG18318.1\|2969535_2970234_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.0e-135	100.0
AXG18319.1\|2970238_2970982_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.3e-147	95.1
AXG18320.1\|2970879_2971527_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.1e-111	97.2
AXG18321.1\|2971587_2975085_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.5
AXG18322.1\|2975155_2975755_+	Ail/Lom family protein	A5LH44	Enterobacteria_phage	4.5e-107	95.5
AXG20223.1\|2975819_2978891_+\|tail	phage tail protein	U5N099	Enterobacteria_phage	2.8e-67	80.7
AXG18323.1\|2978890_2979475_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.6e-103	95.8
AXG18324.1\|2979544_2980318_-	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
AXG18325.1\|2980724_2982158_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.1e-106	50.1
AXG18326.1\|2982192_2983401_-	restriction endonuclease	E5E3X4	Burkholderia_phage	7.9e-34	38.6
AXG18327.1\|2984212_2984695_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	4.0e-29	46.8
AXG18328.1\|2984826_2985303_+	ubiquinone-binding protein	NA	NA	NA	NA
AXG18329.1\|2985292_2985583_+	RnfH family protein	NA	NA	NA	NA
AXG18330.1\|2985644_2985986_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXG18331.1\|2986134_2987796_-	DNA repair protein RecN	NA	NA	NA	NA
AXG18332.1\|2987881_2988760_-	NAD(+) kinase	NA	NA	NA	NA
AXG20224.1\|2988691_2988886_+	molecular chaperone GrpE	NA	NA	NA	NA
AXG18333.1\|2988882_2989476_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXG20225.1\|2989530_2990772_-	DUF21 domain-containing protein	NA	NA	NA	NA
AXG20226.1\|2990837_2991629_-	inner membrane protein YpjD	NA	NA	NA	NA
AXG18334.1\|2991795_2993157_+	signal recognition particle protein	NA	NA	NA	NA
AXG18335.1\|2993405_2993654_+	30S ribosomal protein S16	NA	NA	NA	NA
AXG18336.1\|2993672_2994221_+	ribosome maturation factor RimM	NA	NA	NA	NA
AXG18337.1\|2994251_2995019_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXG18338.1\|2995060_2995408_+	50S ribosomal protein L19	NA	NA	NA	NA
AXG18339.1\|2995484_2995967_-	OmpA family protein	NA	NA	NA	NA
AXG18340.1\|2995982_2997209_-	GGDEF domain-containing protein	NA	NA	NA	NA
AXG18341.1\|2997198_2997717_-	DUF4154 domain-containing protein	NA	NA	NA	NA
AXG18342.1\|2997866_2998232_-	DUF2799 domain-containing protein	NA	NA	NA	NA
AXG18343.1\|2998441_2999512_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	5.3e-90	51.2
AXG18344.1\|2999522_3000644_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXG18345.1\|3000686_3001847_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AXG20227.1\|3001945_3001993_-	hypothetical protein	NA	NA	NA	NA
AXG18346.1\|3002096_3002438_-	ribosome-associated inhibitor A	NA	NA	NA	NA
AXG18347.1\|3002472_3002679_-	hypothetical protein	NA	NA	NA	NA
AXG18348.1\|3002708_3003446_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXG18349.1\|3003580_3004561_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AXG18350.1\|3004557_3005289_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXG18351.1\|3005418_3007992_+	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.3
AXG18352.1\|3013675_3013789_+	alpha-ketoglutarate permease	NA	NA	NA	NA
AXG18353.1\|3013770_3015069_+	alpha-ketoglutarate permease	Q6JIH2	Burkholderia_virus	1.3e-45	32.2
AXG18354.1\|3015065_3015389_-	YfiM family lipoprotein	NA	NA	NA	NA
AXG18355.1\|3015434_3016790_-	phosphatidylserine synthase	NA	NA	NA	NA
AXG18356.1\|3016903_3019564_-	protein lysine acetyltransferase	NA	NA	NA	NA
AXG20228.1\|3019595_3020294_-	DTW domain-containing protein	NA	NA	NA	NA
AXG18357.1\|3020362_3020782_-	thiol disulfide reductase thioredoxin	A0A0K2FIM3	Achromobacter_phage	2.8e-15	38.5
AXG18358.1\|3020795_3020999_+	hypothetical protein	NA	NA	NA	NA
AXG18359.1\|3020988_3022026_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_7

3256738 : 3299828

Enterobacteria_phage(43.55%)

portal,terminase,lysis,holin,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18568.1\|3256738_3259411_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	3.2e-59	34.6
AXG18569.1\|3259407_3259791_-	hypothetical protein	NA	NA	NA	NA
AXG18570.1\|3259787_3260072_-	hypothetical protein	NA	NA	NA	NA
AXG18571.1\|3260103_3260463_-	hypothetical protein	NA	NA	NA	NA
AXG18572.1\|3260455_3260632_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.2e-05	55.6
AXG20237.1\|3260763_3260943_+	hypothetical protein	A0A2H4JB52	uncultured_Caudovirales_phage	5.8e-10	54.2
AXG18573.1\|3260992_3261208_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXG18574.1\|3261310_3262192_-	hypothetical protein	NA	NA	NA	NA
AXG20238.1\|3262222_3263497_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	2.9e-71	40.3
AXG18575.1\|3263769_3263970_-	transcriptional regulator	K7P7V0	Enterobacteria_phage	2.4e-33	100.0
AXG18576.1\|3264027_3264195_-	hypothetical protein	A0A0K2FJ46	Enterobacteria_phage	2.4e-26	96.4
AXG18577.1\|3264353_3264797_-	hypothetical protein	A0A1B0V865	Salmonella_phage	8.4e-34	84.8
AXG18578.1\|3264793_3265159_-	HNH endonuclease	A0A2R2Z2X9	Escherichia_phage	8.7e-69	99.2
AXG18579.1\|3265160_3265379_-	DUF4014 domain-containing protein	A0A2R2Z311	Escherichia_phage	1.8e-13	55.6
AXG18580.1\|3265411_3265624_-	hypothetical protein	A0A2R2Z310	Escherichia_phage	1.5e-33	91.4
AXG18581.1\|3265674_3266031_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	4.6e-59	100.0
AXG18582.1\|3266032_3266542_-	HNH endonuclease	A0A2I7S010	Vibrio_phage	2.2e-33	45.6
AXG18583.1\|3266617_3266785_-	DUF2737 family protein	Q716F2	Shigella_phage	6.6e-24	98.2
AXG18584.1\|3266795_3267092_-	DUF2856 family protein	G9L665	Escherichia_phage	3.3e-42	87.8
AXG18585.1\|3267115_3267703_-	DUF669 domain-containing protein	G9L666	Escherichia_phage	1.9e-105	99.0
AXG18586.1\|3267699_3268380_-	ATP-binding protein	A0A2D1GLT5	Escherichia_phage	2.2e-126	99.6
AXG18587.1\|3268388_3268577_-	hypothetical protein	A0A2D1GM16	Escherichia_phage	1.7e-28	100.0
AXG18588.1\|3268573_3268813_-	host cell division inhibitory peptide Kil	K7PL44	Enterobacteria_phage	1.5e-37	98.7
AXG18589.1\|3269001_3269190_-	hypothetical protein	A0A0B7MKW0	Enterobacteria_phage	1.3e-12	61.1
AXG18590.1\|3269189_3269486_-	hypothetical protein	A0A2D1GLR6	Escherichia_phage	5.2e-48	94.9
AXG18591.1\|3269525_3269777_-	hypothetical protein	A4KWV4	Enterobacteria_phage	9.5e-43	98.8
AXG18592.1\|3270154_3270517_-	antitermination N domain protein	K7PHE0	Enterobacteria_phage	2.9e-56	97.5
AXG18593.1\|3270519_3270792_-	hypothetical protein	K7PH69	Enterobacterial_phage	1.4e-26	90.0
AXG18594.1\|3271366_3271735_-	hypothetical protein	K7P6G1	Enterobacteria_phage	8.5e-56	98.4
AXG18595.1\|3271753_3272470_-	helix-turn-helix domain-containing protein	K7PGR7	Enterobacteria_phage	9.2e-123	100.0
AXG18596.1\|3272576_3272771_+	Cro/Cl family transcriptional regulator	K7PLQ6	Enterobacteria_phage	1.8e-28	100.0
AXG18597.1\|3272879_3273158_+	hypothetical protein	K7P7A2	Enterobacteria_phage	9.0e-42	97.8
AXG18598.1\|3273340_3274231_+	DNA replication protein	G5DA89	Enterobacteria_phage	3.4e-159	99.7
AXG18599.1\|3274205_3275657_+	helicase DnaB	Q7Y2K5	Escherichia_phage	5.0e-277	99.6
AXG18600.1\|3275656_3275755_+	histone H1	Q9MCP6	Enterobacteria_phage	7.5e-12	100.0
AXG18601.1\|3275741_3275954_+	hypothetical protein	A0A1V0E5J7	Salmonella_phage	6.2e-35	98.6
AXG18602.1\|3275916_3276375_+	recombination protein NinB	M1FPM8	Enterobacteria_phage	1.6e-80	100.0
AXG18603.1\|3276371_3276899_+	phage N-6-adenine-methyltransferase	A0A1I9LJP9	Stx_converting_phage	9.5e-101	100.0
AXG18604.1\|3276895_3277078_+	NinE family protein	K7PH28	Enterobacteria_phage	7.4e-29	100.0
AXG18605.1\|3277074_3277248_+	protein ninF	K7PL22	Enterobacteria_phage	2.8e-25	98.2
AXG18606.1\|3277237_3277630_+	hypothetical protein	A0A077SL57	Escherichia_phage	2.2e-14	35.2
AXG18607.1\|3277622_3277913_+	DUF1364 domain-containing protein	Q9MCN9	Enterobacteria_phage	2.5e-50	97.9
AXG18608.1\|3277909_3278434_+	HNH endonuclease	K4F9R1	Cronobacter_phage	7.1e-32	42.9
AXG18609.1\|3278434_3278797_+	RusA family crossover junction endodeoxyribonuclease	K7PJW5	Enterobacteria_phage	6.6e-61	97.5
AXG18610.1\|3278793_3278982_+	protein ninH	K7PH29	Enterobacteria_phage	1.9e-27	100.0
AXG18611.1\|3278978_3279602_+	antitermination protein	K7PM87	Enterobacteria_phage	3.0e-114	100.0
AXG18612.1\|3280324_3280648_+\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
AXG18613.1\|3280631_3281108_+	lysozyme	G5DA94	Enterobacteria_phage	9.8e-89	100.0
AXG18614.1\|3281104_3281542_+\|lysis	lysis protein	K7PJN9	Enterobacteria_phage	5.0e-71	98.6
AXG18615.1\|3281743_3282262_+	Rha family transcriptional regulator	A0A2D1GLJ3	Escherichia_phage	5.5e-93	99.4
AXG18616.1\|3282608_3282824_+	DUF551 domain-containing protein	A0A193GZ43	Enterobacter_phage	3.1e-26	75.7
AXG18617.1\|3282971_3283214_+	DUF2560 family protein	A0A0M4R322	Salmonella_phage	7.5e-37	100.0
AXG18618.1\|3283293_3283782_+	DNA-packaging protein	G8EYI7	Enterobacteria_phage	1.4e-90	100.0
AXG18619.1\|3283759_3285259_+\|terminase	terminase	A0A2D1GLW6	Escherichia_phage	2.4e-306	99.8
AXG18620.1\|3285259_3287425_+\|portal	portal protein	A0A2D1GLJ6	Escherichia_phage	0.0e+00	98.9
AXG18621.1\|3287438_3288350_+	scaffolding protein	A0A2D1GLN7	Escherichia_phage	8.3e-161	99.3
AXG18622.1\|3288349_3289645_+\|coat	coat protein	A0A2D1GLV2	Escherichia_phage	8.0e-242	98.8
AXG20239.1\|3289697_3290294_+	hypothetical protein	I6S1J7	Salmonella_phage	3.9e-58	62.2
AXG18623.1\|3290271_3290772_+	recombinase RmuC	G8EYJ2	Enterobacteria_phage	1.9e-90	98.8
AXG18624.1\|3290772_3292191_+	hypothetical protein	Q9AYZ4	Salmonella_phage	7.8e-275	99.2
AXG18625.1\|3292190_3293039_+	hypothetical protein	Q716G6	Shigella_phage	1.9e-98	94.3
AXG18626.1\|3293038_3293494_+	DUF2824 family protein	Q716G5	Shigella_phage	1.3e-85	98.0
AXG18627.1\|3293496_3294192_+	DNA transfer protein	G5DA80	Enterobacteria_phage	1.5e-85	92.7
AXG18628.1\|3294201_3295533_+	acyltransferase	A0A2D1GLX5	Escherichia_phage	2.0e-208	96.8
AXG18629.1\|3295533_3298302_+	hypothetical protein	A0A2D1GLK8	Escherichia_phage	0.0e+00	94.7
AXG18630.1\|3298319_3298472_-	hypothetical protein	A0A088CPT2	Enterobacteria_phage	2.5e-06	61.1
AXG18631.1\|3298484_3298961_-	hypothetical protein	NA	NA	NA	NA
AXG18632.1\|3298880_3299828_+	DNA transfer domain protein	Q716G2	Shigella_phage	2.5e-160	99.0

DBSCAN-SWA_8

3535931 : 3545373

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18845.1\|3535931_3536858_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.8e-23	30.8
AXG18846.1\|3536862_3537594_+	ABC transporter permease	NA	NA	NA	NA
AXG18847.1\|3537574_3537682_-	hypothetical protein	NA	NA	NA	NA
AXG18848.1\|3537741_3538473_-	transcriptional regulator	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AXG18849.1\|3538694_3540380_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AXG18850.1\|3540376_3541096_+	DNA-binding response regulator	NA	NA	NA	NA
AXG18851.1\|3541142_3541613_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AXG18852.1\|3541653_3542115_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
AXG18853.1\|3542239_3544240_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6
AXG18854.1\|3544236_3545373_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7

DBSCAN-SWA_9

3640363 : 3649020

Enterobacteria_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG18926.1\|3640363_3641758_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	31.9
AXG18927.1\|3641932_3642826_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	7.9e-47	41.0
AXG18928.1\|3642862_3643126_-	hypothetical protein	NA	NA	NA	NA
AXG18929.1\|3643198_3644284_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.0e-100	54.2
AXG18930.1\|3644283_3645183_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	9.7e-29	34.8
AXG18931.1\|3645240_3646116_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.6e-107	64.5
AXG18932.1\|3646124_3646679_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.7e-47	56.3
AXG18933.1\|3646687_3647926_+	flippase	NA	NA	NA	NA
AXG18934.1\|3647928_3649020_+	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.9e-140	64.4

DBSCAN-SWA_10

4095916 : 4111740

Salmonella_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG19357.1\|4095916_4098343_-	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	1.3e-213	49.2
AXG19358.1\|4098541_4098847_-	DUF1161 domain-containing protein	NA	NA	NA	NA
AXG20273.1\|4098954_4099665_+	YnfC family lipoprotein	NA	NA	NA	NA
AXG19359.1\|4099667_4100228_-	spermidine N1-acetyltransferase	NA	NA	NA	NA
AXG19360.1\|4100262_4100604_-	DUF1283 family protein	NA	NA	NA	NA
AXG19361.1\|4100738_4101065_+	YnfA family protein	A0A218MNG8	uncultured_virus	9.9e-24	55.6
AXG19362.1\|4101101_4101290_+	hypothetical protein	NA	NA	NA	NA
AXG19363.1\|4101270_4102485_+	D-galactonate dehydratase family protein	Q6A202	Oenococcus_phage	1.1e-46	29.0
AXG19364.1\|4102496_4103516_+	starvation-sensing protein RspB	E3SJ82	Synechococcus_phage	9.7e-17	25.9
AXG19365.1\|4103573_4103702_+	transporter	NA	NA	NA	NA
AXG19366.1\|4103703_4104999_-	DUF3596 domain-containing protein	B6DZ48	Enterobacteria_phage	1.9e-155	62.3
AXG19367.1\|4105018_4105270_-	DNA-binding protein	S4TND0	Salmonella_phage	2.2e-15	50.0
AXG19368.1\|4105342_4107814_-	exonuclease	A0A192Y6E0	Salmonella_phage	8.5e-59	56.7
AXG19369.1\|4107906_4108098_-	DUF1482 family protein	NA	NA	NA	NA
AXG19370.1\|4108094_4108283_-	division inhibition protein DicB	NA	NA	NA	NA
AXG19371.1\|4108850_4109069_-	hypothetical protein	NA	NA	NA	NA
AXG19372.1\|4109098_4109269_-	hypothetical protein	NA	NA	NA	NA
AXG19373.1\|4109228_4109384_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	3.0e-07	53.2
AXG19374.1\|4109576_4110035_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.8e-24	46.2
AXG19375.1\|4110061_4110289_+	transcriptional regulator	NA	NA	NA	NA
AXG19376.1\|4110272_4110794_+	hypothetical protein	NA	NA	NA	NA
AXG19377.1\|4110720_4111740_+	hypothetical protein	U5P0A0	Shigella_phage	1.4e-55	60.2

DBSCAN-SWA_11

4115716 : 4148282

Enterobacteria_phage(54.84%)

portal,terminase,lysis,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG19383.1\|4115716_4115929_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.1e-26	94.3
AXG19384.1\|4116145_4116397_+	hypothetical protein	NA	NA	NA	NA
AXG19385.1\|4116463_4116742_+	hypothetical protein	I6PCV7	Cronobacter_phage	9.7e-12	48.4
AXG19386.1\|4116743_4117793_+	DUF968 domain-containing protein	U5P0K4	Shigella_phage	2.2e-109	54.6
AXG19387.1\|4117805_4118180_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	1.1e-34	62.7
AXG19388.1\|4118176_4118998_+	antitermination protein	K7PKS8	Enterobacteria_phage	5.9e-81	54.0
AXG19389.1\|4119536_4119863_+	hypothetical protein	NA	NA	NA	NA
AXG19390.1\|4119898_4120030_+	DUF3927 domain-containing protein	H6WZJ7	Escherichia_phage	3.7e-06	100.0
AXG19391.1\|4120396_4120825_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AXG20274.1\|4120996_4121371_+	tolA family protein	NA	NA	NA	NA
AXG19392.1\|4121622_4121838_+\|lysis	lysis protein S	A5LH82	Enterobacteria_phage	5.9e-33	95.8
AXG19393.1\|4121842_4122187_+	DUF1327 domain-containing protein	K7PGU6	Enterobacteria_phage	2.2e-37	95.2
AXG19394.1\|4122152_4122425_-	hypothetical protein	NA	NA	NA	NA
AXG19395.1\|4122530_4123073_+	lysozyme	Q08J98	Stx2-converting_phage	3.4e-93	87.2
AXG19396.1\|4123069_4123606_+	hypothetical protein	K7PHH7	Enterobacteria_phage	1.1e-72	83.5
AXG19397.1\|4123774_4124467_-	hypothetical protein	NA	NA	NA	NA
AXG19398.1\|4125038_4125533_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
AXG19399.1\|4125532_4127635_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	97.4
AXG19400.1\|4127631_4127844_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
AXG19401.1\|4127843_4129352_+\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	3.5e-289	99.6
AXG19402.1\|4129296_4131324_+\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
AXG19403.1\|4131365_4131734_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	9.7e-52	100.0
AXG19404.1\|4131726_4132002_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
AXG19405.1\|4132013_4132592_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	7.2e-102	99.5
AXG19406.1\|4132588_4132990_+\|tail	phage tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
AXG19407.1\|4133001_4133745_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	7.8e-133	100.0
AXG20275.1\|4133805_4134192_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	1.6e-65	100.0
AXG19408.1\|4134200_4134530_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
AXG19409.1\|4134501_4137567_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	97.1
AXG19410.1\|4137566_4137896_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	5.1e-60	99.1
AXG19411.1\|4137905_4138604_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	2.3e-134	99.6
AXG19412.1\|4138609_4139353_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	95.5
AXG19413.1\|4139250_4139898_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.5e-111	96.7
AXG19414.1\|4139958_4143438_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	90.7
AXG19415.1\|4143506_4144106_+	Ail/Lom family protein	H6WZM8	Escherichia_phage	5.5e-105	94.5
AXG20276.1\|4144170_4147701_+	short-chain fatty acid transporter	X2KTY7	Enterobacteria_phage	1.9e-11	35.5
AXG19416.1\|4147700_4148282_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.5e-102	94.3

DBSCAN-SWA_12

4791978 : 4890113

Salmonella_phage(57.63%)

integrase,head,portal,transposase,plate,lysis,tail,capsid,tRNA,protease

attL 4784939:4784954|attR 4893416:4893431

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4784939:4784954	attL	NA	NA	NA	NA
AXG19996.1\|4791978_4793271_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.5e-94	48.2
AXG19997.1\|4793361_4794705_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.1e-80	40.8
AXG19998.1\|4794715_4795327_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA
AXG19999.1\|4795481_4799549_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.2e-86	48.7
AXG20000.1\|4799683_4800178_-	leucine-responsive regulatory protein	NA	NA	NA	NA
AXG20001.1\|4800722_4801688_+	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	8.5e-63	44.6
AXG20002.1\|4801810_4803577_+	ATP-binding/permease CydD	W8CYL7	Bacillus_phage	4.1e-23	24.3
AXG20003.1\|4803577_4805299_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	6.4e-21	25.4
AXG20004.1\|4805340_4806045_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXG20005.1\|4806329_4806548_+	translation initiation factor IF-1	NA	NA	NA	NA
AXG20006.1\|4808430_4808985_-	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA
AXG20007.1\|4808995_4809997_-	type I-F CRISPR-associated protein Csy3	A0A2D0YRR8	Vibrio_phage	1.8e-47	39.9
AXG20008.1\|4810007_4810931_-	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA
AXG20009.1\|4810927_4812235_-	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA
AXG20010.1\|4812565_4815799_-	type I-F CRISPR-associated helicase Cas3	A0A2I7RCU8	Vibrio_phage	2.8e-62	28.8
AXG20011.1\|4815795_4816779_-	type I-F CRISPR-associated endonuclease Cas1	A0A2D0YFC9	Vibrio_phage	2.9e-42	35.2
AXG20012.1\|4817971_4820248_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.9e-166	42.5
AXG20013.1\|4820278_4820599_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4
AXG20014.1\|4820921_4821146_+	cold-shock protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
AXG20015.1\|4821218_4823165_-	macrolide ABC transporter permease/ATP-binding protein MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
AXG20016.1\|4823161_4824277_-	MacA family efflux pump subunit	NA	NA	NA	NA
AXG20017.1\|4824391_4825384_+	DUF535 domain-containing protein	NA	NA	NA	NA
AXG20018.1\|4825380_4827039_-	ATP-dependent endonuclease	NA	NA	NA	NA
AXG20019.1\|4827464_4828160_+	aquaporin	NA	NA	NA	NA
AXG20020.1\|4828654_4829554_+	transporter	NA	NA	NA	NA
AXG20021.1\|4829697_4831350_+	hydroxylamine reductase	NA	NA	NA	NA
AXG20022.1\|4831361_4832330_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXG20023.1\|4832462_4834181_+	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	4.0e-31	24.1
AXG20024.1\|4834217_4835219_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
AXG20025.1\|4835229_4836660_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXG20311.1\|4836758_4837772_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXG20026.1\|4837768_4838599_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
AXG20027.1\|4838595_4838919_-	hypothetical protein	NA	NA	NA	NA
AXG20028.1\|4839044_4839560_+	lipoprotein	NA	NA	NA	NA
AXG20029.1\|4839777_4840506_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
AXG20030.1\|4840523_4841255_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXG20031.1\|4841261_4841978_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
AXG20032.1\|4841977_4842646_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
AXG20033.1\|4842937_4843669_+	arginine/ornithine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXG20034.1\|4843843_4844971_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	4.6e-28	27.3
AXG20035.1\|4845011_4845500_-	DUF2593 family protein	NA	NA	NA	NA
AXG20036.1\|4845559_4846405_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
AXG20037.1\|4846401_4847355_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
AXG20038.1\|4847364_4848498_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.9e-29	34.0
AXG20039.1\|4848592_4849705_-	putrescine-binding periplasmic protein	NA	NA	NA	NA
AXG20040.1\|4850056_4850533_-	YbjN domain-containing protein	NA	NA	NA	NA
AXG20041.1\|4850620_4851523_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
AXG20042.1\|4852289_4852577_-	DUF1418 family protein	NA	NA	NA	NA
AXG20043.1\|4852736_4852994_+	glutaredoxin	A0A2I7SAE2	Vibrio_phage	8.6e-23	61.9
AXG20044.1\|4853023_4853401_-	hypothetical protein	NA	NA	NA	NA
AXG20045.1\|4853670_4855356_+	transporter	NA	NA	NA	NA
AXG20046.1\|4855591_4855810_-	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
AXG20047.1\|4855900_4857001_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	2.9e-176	88.3
AXG20048.1\|4856997_4857483_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	1.8e-66	80.6
AXG20049.1\|4857479_4860557_-\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.9
AXG20050.1\|4860549_4860669_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
AXG20051.1\|4860683_4860986_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
AXG20052.1\|4861040_4861556_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	5.6e-90	95.9
AXG20053.1\|4861565_4862738_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.1e-202	90.0
AXG20054.1\|4862844_4863258_-\|tail	phage tail protein	U5P0S4	Shigella_phage	1.5e-21	73.0
AXG20055.1\|4863257_4865177_-\|tail	phage tail protein	A0A0F7LDR4	Escherichia_phage	8.0e-81	47.4
AXG20056.1\|4865173_4865779_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.2e-111	92.5
AXG20057.1\|4865771_4866680_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	2.2e-145	91.4
AXG20058.1\|4866666_4867026_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.5e-52	87.4
AXG20059.1\|4867022_4867601_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.5e-91	85.4
AXG20312.1\|4869991_4870432_+	hypothetical protein	NA	NA	NA	NA
AXG20060.1\|4870507_4870954_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.3e-54	78.4
AXG20061.1\|4870946_4871378_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.7
AXG20062.1\|4871340_4871544_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	4.7e-24	79.1
AXG20063.1\|4871473_4871902_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	8.6e-60	92.2
AXG20064.1\|4871898_4872414_-	lysozyme	E5G6N1	Salmonella_phage	1.9e-90	93.6
AXG20065.1\|4872394_4872610_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AXG20066.1\|4872613_4872817_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AXG20067.1\|4872816_4873281_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	2.2e-77	89.6
AXG20068.1\|4873376_4874027_-	hypothetical protein	E5G6M7	Salmonella_phage	1.5e-111	95.8
AXG20069.1\|4874030_4875089_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AXG20070.1\|4875105_4875939_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	1.7e-123	89.9
AXG20071.1\|4876081_4877848_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.3
AXG20072.1\|4877847_4878915_+\|portal	phage portal protein	E5G6M3	Salmonella_phage	1.0e-170	88.0
AXG20073.1\|4878999_4879626_+	hypothetical protein	NA	NA	NA	NA
AXG20074.1\|4880428_4880854_+	hypothetical protein	NA	NA	NA	NA
AXG20075.1\|4881013_4881319_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AXG20313.1\|4881257_4881446_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AXG20076.1\|4881599_4884014_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.3
AXG20077.1\|4884010_4884868_-	DNA adenine methylase	E5G6L8	Salmonella_phage	1.6e-158	95.4
AXG20078.1\|4884864_4885092_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
AXG20079.1\|4885091_4885325_-	DUF2732 family protein	E5G6L6	Salmonella_phage	5.0e-30	93.5
AXG20080.1\|4885392_4885734_-	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AXG20081.1\|4885697_4885898_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
AXG20082.1\|4885905_4886415_-	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AXG20083.1\|4886447_4886669_-	regulator	NA	NA	NA	NA
AXG20084.1\|4886794_4887364_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	4.2e-38	42.9
AXG20085.1\|4887379_4887571_+	hypothetical protein	A0A0R6PIH8	Moraxella_phage	4.0e-09	68.2
AXG20086.1\|4887789_4889010_+\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA
AXG20314.1\|4889081_4890113_+\|integrase	integrase	A0A218M4I3	Erwinia_phage	5.6e-105	56.7
4893416:4893431	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP031136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 82749

Salmonella_phage(96.34%)

tail,capsid,terminase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20645.1\|972_1731_+	hypothetical protein	J9Q6J5	Salmonella_phage	4.5e-51	46.9
AXG20646.1\|1740_2310_+	hypothetical protein	J9Q7Z7	Salmonella_phage	2.5e-91	86.8
AXG20647.1\|2383_4699_+	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	84.4
AXG20648.1\|4804_5947_+	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	2.6e-196	88.7
AXG20649.1\|6024_6894_+	phosphoribosyl-ATP pyrophosphohydrolase	J9Q742	Salmonella_phage	6.3e-134	81.3
AXG20650.1\|7038_8169_+	thymidylate synthase	J9Q6J6	Salmonella_phage	5.1e-192	86.9
AXG20651.1\|8170_8584_+	hypothetical protein	J9Q7Z8	Salmonella_phage	2.3e-62	84.7
AXG20652.1\|8580_9057_+	dihydrofolate reductase	J9Q7T1	Salmonella_phage	2.0e-81	90.5
AXG20653.1\|9056_9701_+	hypothetical protein	J9Q7H4	Salmonella_phage	7.8e-97	81.3
AXG20654.1\|9762_10182_+	hypothetical protein	J9Q743	Salmonella_phage	3.2e-51	71.9
AXG20655.1\|10191_10749_+	3'-5' exonuclease	J9Q6J8	Salmonella_phage	4.8e-87	82.5
AXG20656.1\|10907_11717_+	hypothetical protein	J9Q7Z9	Salmonella_phage	4.4e-65	53.2
AXG20657.1\|11900_12494_+	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	3.4e-99	86.3
AXG20658.1\|12679_12910_+	hypothetical protein	J9Q7H5	Salmonella_phage	1.7e-30	85.1
AXG20659.1\|13492_14083_+	ribonuclease HI	J9Q745	Salmonella_phage	3.7e-93	83.8
AXG20660.1\|14231_14726_+	hypothetical protein	J9Q6J9	Salmonella_phage	3.0e-24	56.2
AXG20661.1\|14735_14924_+	hypothetical protein	J9Q800	Salmonella_phage	7.2e-11	53.2
AXG20662.1\|15017_15443_+	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	5.7e-56	78.7
AXG20663.1\|15442_15601_+	DUF3927 domain-containing protein	NA	NA	NA	NA
AXG20664.1\|15740_16307_+	hypothetical protein	J9Q7H6	Salmonella_phage	8.5e-55	62.0
AXG20665.1\|16448_18134_+	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	92.2
AXG20666.1\|18194_18899_+	hypothetical protein	J9Q6K2	Salmonella_phage	9.4e-88	76.4
AXG20667.1\|18898_19279_+	hypothetical protein	J9Q801	Salmonella_phage	2.2e-27	67.4
AXG20668.1\|19577_20678_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXG20669.1\|20835_22869_+\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	2.2e-44	24.1
AXG20756.1\|23108_23330_+	hypothetical protein	J9Q750	Salmonella_phage	3.3e-15	52.2
AXG20757.1\|23500_24691_+	hypothetical protein	J9Q803	Salmonella_phage	3.1e-123	55.6
AXG20670.1\|26271_26490_+	hypothetical protein	J9Q804	Salmonella_phage	8.6e-32	90.3
AXG20671.1\|26628_26958_+	hypothetical protein	NA	NA	NA	NA
AXG20672.1\|27111_27423_+	hypothetical protein	J9Q7T7	Salmonella_phage	5.7e-29	63.1
AXG20673.1\|27549_27945_+	hypothetical protein	J9Q7I1	Salmonella_phage	3.1e-32	54.6
AXG20674.1\|28026_28437_+	hypothetical protein	NA	NA	NA	NA
AXG20675.1\|28787_29270_+	hypothetical protein	J9Q805	Salmonella_phage	1.0e-61	69.8
AXG20676.1\|29876_30107_-	hypothetical protein	NA	NA	NA	NA
AXG20677.1\|30128_30332_-	hypothetical protein	J9Q7I3	Salmonella_phage	1.7e-26	89.6
AXG20678.1\|30380_31031_-	hypothetical protein	J9Q754	Salmonella_phage	6.4e-99	84.7
AXG20679.1\|31326_31851_-	transcriptional regulator	J9Q6L0	Salmonella_phage	2.9e-65	78.4
AXG20680.1\|31847_32447_-	hypothetical protein	NA	NA	NA	NA
AXG20681.1\|32462_32951_-	hypothetical protein	NA	NA	NA	NA
AXG20682.1\|33096_33696_-	hypothetical protein	NA	NA	NA	NA
AXG20683.1\|33728_34007_-	hypothetical protein	J9Q7T9	Salmonella_phage	4.6e-22	58.2
AXG20684.1\|34009_35569_-	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	4.1e-277	92.5
AXG20685.1\|35633_36332_+	chromosome partitioning protein ParB	J9Q756	Salmonella_phage	5.1e-110	87.1
AXG20686.1\|36331_37000_+	chromosome partitioning protein ParB	J9Q6L1	Salmonella_phage	2.8e-105	89.2
AXG20687.1\|36996_37635_+	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	3.6e-110	98.1
AXG20688.1\|37627_37882_+	hypothetical protein	J9Q7U0	Salmonella_phage	5.9e-40	96.4
AXG20689.1\|37878_38778_+	hypothetical protein	J9Q7I6	Salmonella_phage	1.3e-166	98.3
AXG20690.1\|38787_39054_+	hypothetical protein	J9Q757	Salmonella_phage	1.4e-36	88.6
AXG20691.1\|39249_39882_+	DNA-binding protein	J9Q6D4	Salmonella_phage	1.8e-90	83.8
AXG20692.1\|39881_41138_+\|terminase	terminase	J9Q7Y2	Salmonella_phage	3.4e-245	96.9
AXG20693.1\|41164_42739_+	hypothetical protein	J9Q7R1	Salmonella_phage	8.4e-286	92.9
AXG20694.1\|42760_43648_+	hypothetical protein	J9Q7F4	Salmonella_phage	1.6e-132	87.9
AXG20695.1\|43673_44549_+\|capsid	phage major capsid protein	J9Q710	Salmonella_phage	3.2e-154	94.2
AXG20696.1\|44622_45543_+	hypothetical protein	J9Q6D6	Salmonella_phage	2.1e-132	83.9
AXG20697.1\|45587_46022_+	hypothetical protein	J9Q7Y3	Salmonella_phage	5.7e-59	81.9
AXG20698.1\|46021_46855_+	hypothetical protein	J9Q7R2	Salmonella_phage	1.3e-141	92.1
AXG20699.1\|46934_47279_+	hypothetical protein	J9Q7F6	Salmonella_phage	2.3e-55	95.6
AXG20700.1\|47269_47743_+	hypothetical protein	J9Q711	Salmonella_phage	3.3e-76	90.4
AXG20701.1\|47744_48128_+	hypothetical protein	J9Q6D8	Salmonella_phage	9.4e-58	83.5
AXG20702.1\|48202_48949_+	hypothetical protein	J9Q7Y4	Salmonella_phage	6.2e-106	83.0
AXG20703.1\|49011_49329_+	hypothetical protein	J9Q7R3	Salmonella_phage	8.6e-49	96.2
AXG20704.1\|49409_49679_+	hypothetical protein	J9Q7F7	Salmonella_phage	1.7e-34	94.8
AXG20705.1\|49686_54261_+\|tail	phage tail tape measure protein	J9Q712	Salmonella_phage	0.0e+00	83.8
AXG20706.1\|55465_56197_+\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	5.3e-134	97.0
AXG20758.1\|56189_56987_+\|tail	phage tail protein	J9Q7R4	Salmonella_phage	5.9e-155	94.3
AXG20707.1\|56974_57568_+\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	3.4e-99	90.9
AXG20708.1\|57585_62313_+	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	0.0e+00	74.2
AXG20709.1\|62948_63644_-	hypothetical protein	NA	NA	NA	NA
AXG20759.1\|64488_66705_+	chaperone of endosialidase	J9Q6E3	Salmonella_phage	1.4e-73	50.2
AXG20710.1\|66765_67020_+	hypothetical protein	J9Q7R5	Salmonella_phage	3.0e-28	67.9
AXG20711.1\|67019_67628_+	hypothetical protein	J9Q7G0	Salmonella_phage	2.6e-78	74.3
AXG20712.1\|67635_67869_+	hypothetical protein	J9Q714	Salmonella_phage	3.3e-21	59.2
AXG20713.1\|67950_68274_+	hypothetical protein	J9Q6E7	Salmonella_phage	5.9e-45	89.7
AXG20714.1\|68287_68980_+	hypothetical protein	J9Q7Y7	Salmonella_phage	1.4e-123	93.9
AXG20715.1\|68981_69233_+	hypothetical protein	J9Q7R6	Salmonella_phage	1.1e-27	81.9
AXG20716.1\|69605_70025_+	hypothetical protein	J9Q6E9	Salmonella_phage	2.8e-39	61.3
AXG20717.1\|70009_70783_+	hypothetical protein	J9Q7Y8	Salmonella_phage	2.3e-31	34.5
AXG20718.1\|70932_71601_+	plasmid stability protein	J9Q7R7	Salmonella_phage	1.7e-110	91.4
AXG20719.1\|71600_71960_+	hypothetical protein	J9Q7G3	Salmonella_phage	3.3e-44	96.9
AXG20720.1\|72011_73718_+	hypothetical protein	X2KLG0	Campylobacter_phage	1.3e-13	24.3
AXG20721.1\|73899_74640_+	hypothetical protein	J9Q7R8	Salmonella_phage	2.2e-127	89.6
AXG20722.1\|74683_76024_+	DNA helicase	J9Q7G4	Salmonella_phage	1.3e-234	93.3
AXG20723.1\|76105_77287_+	DNA primase	J9Q720	Salmonella_phage	1.3e-203	90.8
AXG20724.1\|77278_78532_-	sel1 repeat family protein	NA	NA	NA	NA
AXG20725.1\|78759_79173_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	3.9e-25	48.1
AXG20726.1\|79298_80081_+	hypothetical protein	J9Q7Z0	Salmonella_phage	3.0e-58	43.4
AXG20727.1\|80361_80619_+	hypothetical protein	J9Q7R9	Salmonella_phage	2.3e-15	60.2
AXG20728.1\|80615_81938_+	DNA ligase	J9Q7G5	Salmonella_phage	2.2e-239	90.5
AXG20760.1\|81937_82114_+	hypothetical protein	J9Q729	Salmonella_phage	1.1e-16	72.4
AXG20729.1\|82097_82313_+	hypothetical protein	J9Q6I3	Salmonella_phage	9.7e-20	72.1
AXG20730.1\|82309_82462_+	hypothetical protein	J9Q7Z1	Salmonella_phage	1.6e-13	76.0
AXG20731.1\|82458_82749_+	C-type natriuretic protein	J9Q7S1	Salmonella_phage	6.9e-37	78.1

DBSCAN-SWA_2

85810 : 108512

Salmonella_phage(91.3%)

integrase

attL 82309:82328|attR 92179:92198

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
82309:82328	attL	NA	NA	NA	NA
AXG20761.1\|85810_86056_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	4.5e-13	44.9
AXG20733.1\|86266_87370_+\|integrase	integrase	A0A1P8DTG6	Proteus_phage	1.3e-27	33.8
AXG20734.1\|87364_87751_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG20735.1\|88001_88214_+	hypothetical protein	NA	NA	NA	NA
AXG20736.1\|88312_90421_+	cobalamin biosynthesis protein CobT	J9Q7G6	Salmonella_phage	6.3e-228	67.1
AXG20737.1\|90516_91752_+	porphyrin biosynthesis protein	J9Q733	Salmonella_phage	6.7e-198	81.3
AXG20738.1\|91754_91958_+	hypothetical protein	J9Q6I7	Salmonella_phage	4.4e-30	89.6
AXG20739.1\|91932_94296_+	DNA polymerase III subunit alpha	J9Q7Z2	Salmonella_phage	0.0e+00	89.6
92179:92198	attR	NA	NA	NA	NA
AXG20740.1\|94344_95079_+	HNH endonuclease	NA	NA	NA	NA
AXG20741.1\|95075_96245_+	uracil-DNA glycosylase	J9Q7Z2	Salmonella_phage	2.2e-206	92.2
AXG20742.1\|96371_96803_+	hypothetical protein	J9Q6I8	Salmonella_phage	4.4e-64	86.0
AXG20743.1\|96920_97949_+	regulator	J9Q7Z3	Salmonella_phage	1.4e-143	86.3
AXG20744.1\|98009_98954_+	exonuclease	J9Q7S6	Salmonella_phage	5.6e-168	91.4
AXG20745.1\|98953_99220_+	hypothetical protein	J9Q7G8	Salmonella_phage	2.6e-30	77.3
AXG20746.1\|99222_101562_+	recombinase RecA	J9Q736	Salmonella_phage	1.8e-29	85.1
AXG20747.1\|101653_101854_+	hypothetical protein	J9Q6J0	Salmonella_phage	3.2e-09	60.6
AXG20748.1\|101857_102688_+	SPFH/Band 7/PHB domain protein	J9Q7Z4	Salmonella_phage	3.1e-122	94.9
AXG20762.1\|102788_103205_+	hypothetical protein	J9Q7G9	Salmonella_phage	1.4e-59	75.4
AXG20749.1\|103260_103536_+	hypothetical protein	J9Q738	Salmonella_phage	9.8e-33	73.6
AXG20750.1\|103575_103755_+	hypothetical protein	J9Q6J1	Salmonella_phage	4.0e-11	67.8
AXG20751.1\|103751_104087_+	hypothetical protein	J9Q7Z5	Salmonella_phage	8.6e-39	73.9
AXG20752.1\|104086_104299_+	hypothetical protein	J9Q7S8	Salmonella_phage	3.4e-33	94.3
AXG20753.1\|104878_105973_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.3e-75	45.4
AXG20754.1\|106294_106939_+	hypothetical protein	J9Q739	Salmonella_phage	2.9e-107	86.3
AXG20755.1\|107193_108279_+	exonuclease SbcCD subunit D	J9Q7S9	Salmonella_phage	8.0e-187	87.5
AXG20763.1\|108320_108512_+	hypothetical protein	J9Q7H1	Salmonella_phage	8.3e-23	74.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP031137

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4522 : 53298

Escherichia_phage(45.45%)

protease,integrase,transposase

attL 4311:4325|attR 13275:13289

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4311:4325	attL	NA	NA	NA	NA
AXG20768.1\|4522_5329_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.8e-57	100.0
AXG20769.1\|6101_6857_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	3.8e-143	100.0
AXG20770.1\|7444_8611_+	protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.0e-229	100.0
AXG20771.1\|8610_9582_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-174	99.4
AXG20772.1\|10138_10411_+	hypothetical protein	NA	NA	NA	NA
AXG20828.1\|10448_11351_+	DUF1281 domain-containing protein	NA	NA	NA	NA
AXG20773.1\|11735_12419_+	DNA methylase	A0A2I7RE86	Vibrio_phage	5.1e-30	36.9
AXG20774.1\|12419_12641_+	hypothetical protein	NA	NA	NA	NA
AXG20775.1\|12654_13089_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXG20776.1\|13236_13941_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
13275:13289	attR	NA	NA	NA	NA
AXG20777.1\|14753_15500_+	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.2e-09	30.9
AXG20778.1\|15554_16115_+	conjugal transfer protein	NA	NA	NA	NA
AXG20779.1\|16245_16458_+	hypothetical protein	NA	NA	NA	NA
AXG20829.1\|17328_17463_+	type I toxin-antitoxin system hok family toxin	NA	NA	NA	NA
AXG20780.1\|17759_18014_+	replication protein	NA	NA	NA	NA
AXG20781.1\|18173_18920_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.0e-55	48.5
AXG20782.1\|18934_20476_-\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.3e-129	46.4
AXG20783.1\|20616_20754_-	replication protein RepA	NA	NA	NA	NA
AXG20830.1\|20837_20912_+	RepA leader peptide Tap	NA	NA	NA	NA
AXG20784.1\|22123_22510_+	hypothetical protein	NA	NA	NA	NA
AXG20785.1\|22699_23353_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXG20786.1\|23572_24037_+	mRNA interferase PemK	NA	NA	NA	NA
AXG20831.1\|24056_24137_+	hypothetical protein	NA	NA	NA	NA
AXG20787.1\|24320_25631_+	DUF262 domain-containing protein	NA	NA	NA	NA
AXG20788.1\|25907_26768_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AXG20789.1\|27352_28057_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXG20790.1\|28415_28874_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	7.8e-59	99.0
AXG20791.1\|29176_30037_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
AXG20792.1\|30049_30592_+	tunicamycin resistance protein	NA	NA	NA	NA
AXG20793.1\|31073_31265_-	hypothetical protein	NA	NA	NA	NA
AXG20794.1\|31270_31516_+	hypothetical protein	NA	NA	NA	NA
AXG20795.1\|31566_32694_+	DUF3883 domain-containing protein	NA	NA	NA	NA
AXG20796.1\|32730_33435_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXG20797.1\|33556_34462_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AXG20798.1\|34458_35697_+	MFS transporter	NA	NA	NA	NA
AXG20799.1\|35696_36281_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXG20800.1\|36226_36583_+	hypothetical protein	NA	NA	NA	NA
AXG20832.1\|36773_37538_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
AXG20833.1\|37524_37776_+	hypothetical protein	NA	NA	NA	NA
AXG20801.1\|37666_38371_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXG20802.1\|39017_39365_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXG20803.1\|39570_40359_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
AXG20834.1\|40489_40963_-	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IAU3	Erwinia_phage	1.3e-16	34.6
AXG20804.1\|41865_42570_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXG20835.1\|42713_43268_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
AXG20836.1\|43398_44229_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
AXG20805.1\|44366_44999_+	type B chloramphenicol O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
AXG20806.1\|45382_46087_-\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AXG20807.1\|47583_47775_-	hypothetical protein	NA	NA	NA	NA
AXG20808.1\|47973_48954_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.6e-184	98.8
AXG20837.1\|49027_49687_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
AXG20809.1\|49887_50265_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXG20810.1\|50331_53298_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6

DBSCAN-SWA_2

59052 : 69617

Escherichia_phage(44.44%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG20816.1\|59052_59793_+	site-specific recombinase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6
AXG20817.1\|60077_61055_-	repFIB replication protein A	J9Q7H0	Salmonella_phage	1.4e-100	59.2
AXG20818.1\|62187_62547_-	pdcB	A0A077SLM1	Escherichia_phage	5.0e-45	98.9
AXG20819.1\|62574_62754_-	PdcA protein	Q71TH5	Escherichia_phage	3.5e-23	96.6
AXG20820.1\|62758_63139_-	type II toxin-antitoxin system death-on-curing family toxin	A0A077SK56	Escherichia_phage	1.1e-63	100.0
AXG20821.1\|63138_63360_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	6.7e-32	100.0
AXG20839.1\|63542_65099_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.1e-104	42.5
AXG20822.1\|65095_66379_+	restriction endonuclease subunit S	F2Y1N5	Organic_Lake_phycodnavirus	2.2e-10	26.5
AXG20823.1\|66500_69617_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	2.9e-27	24.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031135

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP031134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP031136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP031137

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection