CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP031029	Enterococcus faecalis strain TY1 plasmid pDEF-2, complete sequence	0 crisprs	NA	1
CP031027	Enterococcus faecalis strain TY1 chromosome, complete genome	0 crisprs	csa3,cas3,cas14j,DinG,DEDDh	13
CP031028	Enterococcus faecalis strain TY1 plasmid pDEF-1, complete sequence	0 crisprs	WYL	5

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

51090 : 58426

Streptococcus_phage(66.67%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90227.1\|51090_51777_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6
AXG90228.1\|51810_52155_-	hypothetical protein	NA	NA	NA	NA
AXG90229.1\|52554_53241_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6
AXG90238.1\|54258_54651_+	GNAT family N-acetyltransferase	A0A0N7GFH7	Staphylococcus_phage	6.9e-72	100.0
AXG90230.1\|54651_56091_+	bifunctional aminoglycoside N-acetyltransferase AAC(6')-Ie/aminoglycoside O-phosphotransferase APH(2'')-Ia	A0A1X9I6C2	Streptococcus_phage	3.8e-285	100.0
AXG90231.1\|56220_57393_-\|transposase	IS256 family transposase IS256	A0A0N9STL0	Staphylococcus_phage	3.5e-135	100.0
AXG90232.1\|57739_58426_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP031027

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

506615 : 582766

Enterococcus_phage(77.19%)

holin,head,protease,transposase,coat,tRNA,integrase,tail,terminase

attL 506314:506335|attR 547871:547892

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
506314:506335	attL	NA	NA	NA	NA
AXG87529.1\|506615_507797_-\|integrase	site-specific integrase	A0A126GGK4	Streptococcus_phage	1.6e-79	43.5
AXG87530.1\|507906_508671_-	ImmA/IrrE family metallo-endopeptidase	A0A0A0YSF3	Streptococcus_phage	2.8e-21	34.6
AXG87531.1\|508686_509040_-	XRE family transcriptional regulator	A0A1S5SC02	Streptococcus_phage	1.1e-20	44.6
AXG87532.1\|509306_509483_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXG87533.1\|509486_509774_+	hypothetical protein	NA	NA	NA	NA
AXG87534.1\|509819_510554_+	oxidoreductase	C9E2M3	Enterococcus_phage	8.1e-74	60.6
AXG87535.1\|510698_510914_+	hypothetical protein	NA	NA	NA	NA
AXG87536.1\|510897_511626_+	hypothetical protein	NA	NA	NA	NA
AXG87537.1\|511762_511954_+	hypothetical protein	A0A0S2MYB0	Enterococcus_phage	2.8e-18	92.2
AXG87538.1\|511974_512394_+	hypothetical protein	NA	NA	NA	NA
AXG87539.1\|512377_512614_+	hypothetical protein	A0A0S2MYD6	Enterococcus_phage	2.4e-27	81.3
AXG87540.1\|512614_513307_+	single-stranded DNA-binding protein	Q6JM07	Lactococcus_phage	1.8e-22	44.0
AXG87541.1\|513319_514213_+	DUF1351 domain-containing protein	A0A0S2MYB3	Enterococcus_phage	7.1e-48	43.0
AXG87542.1\|514209_514890_+	hypothetical protein	A0A0S2MYA3	Enterococcus_phage	1.3e-121	92.9
AXG87543.1\|514895_515381_+	hypothetical protein	A0A1C9LXV1	Streptococcus_phage	3.5e-33	47.3
AXG87544.1\|515386_516343_+	phage replisome organizer	C9E2N2	Enterococcus_phage	1.5e-141	95.3
AXG87545.1\|516342_516642_+	hypothetical protein	D2IZR4	Enterococcus_phage	1.0e-43	89.9
AXG87546.1\|516663_517188_+	hypothetical protein	A0A0S2MYB8	Enterococcus_phage	1.2e-92	98.3
AXG87547.1\|517314_517542_+	hypothetical protein	C9E2N4	Enterococcus_phage	1.0e-35	98.7
AXG87548.1\|517598_518552_+	DNA cytosine methyltransferase	D2IZY5	Enterococcus_phage	9.2e-187	100.0
AXG87549.1\|518527_518743_+	hypothetical protein	D2IZY6	Enterococcus_phage	2.4e-26	100.0
AXG89995.1\|518936_519116_+	hypothetical protein	D2IZY7	Enterococcus_phage	1.2e-26	100.0
AXG87550.1\|519099_519486_+	hypothetical protein	D2IZY8	Enterococcus_phage	7.5e-71	100.0
AXG87551.1\|519482_519833_+	hypothetical protein	D2IZY9	Enterococcus_phage	6.0e-59	100.0
AXG87552.1\|519966_520491_+	DUF1642 domain-containing protein	D2IZZ0	Enterococcus_phage	2.2e-97	100.0
AXG87553.1\|520491_520677_+	hypothetical protein	D2IZZ1	Enterococcus_phage	3.5e-26	100.0
AXG87554.1\|520673_520874_+	hypothetical protein	D2IZZ2	Enterococcus_phage	9.3e-33	100.0
AXG87555.1\|520866_520956_+	hypothetical protein	C9E2P4	Enterococcus_phage	3.6e-05	100.0
AXG87556.1\|521018_521435_+	autolysin	D2IZZ3	Enterococcus_phage	5.8e-69	100.0
AXG87557.1\|521421_521619_+	hypothetical protein	NA	NA	NA	NA
AXG87558.1\|522252_522546_+	hypothetical protein	D2IZZ4	Enterococcus_phage	2.3e-40	100.0
AXG87559.1\|522593_523928_+	chromosome partitioning protein ParB	D2IZZ5	Enterococcus_phage	1.7e-255	100.0
AXG87560.1\|523965_524157_+	hypothetical protein	D2IZZ6	Enterococcus_phage	1.1e-25	100.0
AXG87561.1\|524292_524481_+	hypothetical protein	D2IZZ7	Enterococcus_phage	2.7e-26	100.0
AXG87562.1\|524733_525177_+	hypothetical protein	D2IZZ9	Enterococcus_phage	3.7e-74	100.0
AXG87563.1\|525225_526029_+\|terminase	small subunit of terminase	D2J000	Enterococcus_phage	1.6e-131	100.0
AXG87564.1\|526000_527305_+\|terminase	PBSX family phage terminase large subunit	D2J001	Enterococcus_phage	7.7e-253	100.0
AXG87565.1\|528725_529037_+\|protease	ribosomal-processing cysteine protease Prp	D2J003	Enterococcus_phage	4.1e-51	100.0
AXG87566.1\|529037_530186_+\|head	phage head morphogenesis protein	D2J004	Enterococcus_phage	4.9e-211	100.0
AXG87567.1\|530328_530997_+	DUF4355 domain-containing protein	D2J005	Enterococcus_phage	2.4e-72	100.0
AXG87568.1\|531012_532050_+\|coat	coat protein	D2J006	Enterococcus_phage	6.5e-194	100.0
AXG87569.1\|532063_532402_+	hypothetical protein	D2J007	Enterococcus_phage	3.5e-56	100.0
AXG87570.1\|532382_532724_+	hypothetical protein	D2J008	Enterococcus_phage	1.8e-60	100.0
AXG87571.1\|532723_533263_+	HK97 gp10 family phage protein	D2J009	Enterococcus_phage	5.5e-96	100.0
AXG87572.1\|533259_533622_+	hypothetical protein	D2J010	Enterococcus_phage	1.9e-60	100.0
AXG87573.1\|533641_534100_+\|tail	phage tail protein	D2J011	Enterococcus_phage	9.5e-81	100.0
AXG87574.1\|534156_534567_+	hypothetical protein	D2J012	Enterococcus_phage	1.3e-68	100.0
AXG87575.1\|534599_534959_+	hypothetical protein	D2J013	Enterococcus_phage	3.8e-61	100.0
AXG89996.1\|534974_539504_+\|tail	phage tail protein	D2J014	Enterococcus_phage	0.0e+00	99.9
AXG87576.1\|539514_539880_+	hypothetical protein	D2J015	Enterococcus_phage	9.9e-65	100.0
AXG87577.1\|539896_542314_+	hypothetical protein	D2J016	Enterococcus_phage	0.0e+00	100.0
AXG87578.1\|542473_543496_+	hypothetical protein	D2J018	Enterococcus_phage	3.4e-195	100.0
AXG87579.1\|543575_543797_+	hypothetical protein	D2J019	Enterococcus_phage	6.0e-33	100.0
AXG87580.1\|543789_544026_+\|holin	phage holin	D2J020	Enterococcus_phage	6.2e-36	100.0
AXG87581.1\|544022_545282_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2MYF3	Enterococcus_phage	1.0e-225	91.4
AXG87582.1\|545328_545592_-	hypothetical protein	NA	NA	NA	NA
AXG87583.1\|545627_545858_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG87584.1\|546314_546800_+	hypothetical protein	NA	NA	NA	NA
AXG87585.1\|547063_547639_-	SHOCT domain-containing protein	X5JB37	Clostridium_phage	5.8e-19	39.1
AXG87586.1\|548034_548268_+	hypothetical protein	NA	NA	NA	NA
547871:547892	attR	NA	NA	NA	NA
AXG87587.1\|548432_548840_-	hypothetical protein	NA	NA	NA	NA
AXG87588.1\|548912_549599_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.3e-126	98.7
AXG87589.1\|549734_550709_+	linear amide C-N hydrolase	M1H001	Paramecium_bursaria_Chlorella_virus	2.1e-24	31.6
AXG87590.1\|551152_551347_+	hypothetical protein	NA	NA	NA	NA
AXG87591.1\|551359_551989_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	7.4e-100	78.3
AXG87592.1\|552020_552206_-	hypothetical protein	NA	NA	NA	NA
AXG87593.1\|552235_552565_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AXG87594.1\|552692_553631_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AXG87595.1\|553656_554694_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AXG87596.1\|556043_556316_+	DUF3892 domain-containing protein	NA	NA	NA	NA
AXG87597.1\|556735_556996_+	hypothetical protein	NA	NA	NA	NA
AXG89997.1\|557381_558200_+	PRD domain-containing protein	NA	NA	NA	NA
AXG87598.1\|558286_560158_+	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA
AXG87599.1\|560179_561640_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
AXG87600.1\|561741_562428_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.3e-126	98.7
AXG87601.1\|562823_563777_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	4.6e-13	30.1
AXG87602.1\|563777_565295_+	ABC transporter permease subunit	NA	NA	NA	NA
AXG87603.1\|565436_565892_+	arginine repressor	NA	NA	NA	NA
AXG87604.1\|565925_567434_+	phosphomannomutase/phosphoglucomutase	NA	NA	NA	NA
AXG87605.1\|567457_568012_+	N-acetyltransferase	NA	NA	NA	NA
AXG87606.1\|568136_568988_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AXG87607.1\|569123_569360_-	hypothetical protein	NA	NA	NA	NA
AXG87608.1\|569342_571529_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
AXG87609.1\|571591_571933_+	YlbF family regulator	A0A1X9I5Y8	Streptococcus_phage	2.5e-09	34.9
AXG87610.1\|572088_573324_+	DNA repair exonuclease	NA	NA	NA	NA
AXG87611.1\|573320_576032_+	hypothetical protein	NA	NA	NA	NA
AXG87612.1\|576028_576973_+	HD domain-containing protein	NA	NA	NA	NA
AXG87613.1\|577012_578041_-	foldase	NA	NA	NA	NA
AXG87614.1\|578204_578549_-	YtxH domain-containing protein	NA	NA	NA	NA
AXG87615.1\|578549_578975_-	HIT family protein	NA	NA	NA	NA
AXG87616.1\|579190_579928_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-27	29.8
AXG87617.1\|579929_581141_+	multidrug ABC transporter permease	NA	NA	NA	NA
AXG87618.1\|581269_582049_+	aminoglycoside phosphotransferase	NA	NA	NA	NA
AXG87619.1\|582121_582766_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA

DBSCAN-SWA_2

814075 : 821995

Planktothrix_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG87817.1\|814075_815134_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-17	30.1
AXG87818.1\|815133_816090_+	ATP-binding cassette domain-containing protein	A0A1J0FA64	Only_Syngen_Nebraska_virus	3.2e-06	23.9
AXG87819.1\|816130_817201_+\|transposase	transposase	A0A288TXV8	Enterococcus_phage	7.6e-89	49.0
AXG87820.1\|817600_818122_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.0e-14	33.3
AXG87821.1\|818235_818436_+	50S ribosomal protein L35	NA	NA	NA	NA
AXG87822.1\|818496_818856_+	50S ribosomal protein L20	NA	NA	NA	NA
AXG87823.1\|818901_819252_-	hypothetical protein	NA	NA	NA	NA
AXG87824.1\|819174_819438_+	hypothetical protein	NA	NA	NA	NA
AXG87825.1\|819349_819709_+	DUF1304 domain-containing protein	NA	NA	NA	NA
AXG87826.1\|819836_820271_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXG87827.1\|820288_820804_+	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	7.7e-39	48.8
AXG87828.1\|820819_821995_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	2.5e-85	47.7

DBSCAN-SWA_3

851186 : 901582

Enterococcus_phage(42.11%)

holin,head,protease,portal,plate,tRNA,capsid,integrase,tail,terminase

attL 868026:868053|attR 905355:905382

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG87856.1\|851186_851666_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AXG87857.1\|851658_852180_+	N-acetyltransferase	NA	NA	NA	NA
AXG87858.1\|852349_852559_+	hypothetical protein	NA	NA	NA	NA
AXG87859.1\|852632_853643_-	LacI family transcriptional regulator	NA	NA	NA	NA
AXG87860.1\|853666_854674_-	galactose mutarotase	NA	NA	NA	NA
AXG87861.1\|854663_855332_-	beta-phosphoglucomutase	A0A1D8KNV9	Synechococcus_phage	8.6e-06	24.6
AXG87862.1\|855324_857619_-	glycoside hydrolase family 65 protein	NA	NA	NA	NA
AXG87863.1\|857899_860068_+	PTS glucose/maltose transporter subunit IIBCA	A0A2I7SAJ6	Vibrio_phage	7.3e-06	37.2
AXG87864.1\|860133_860958_+	maltose 6'-phosphate phosphatase	NA	NA	NA	NA
AXG87865.1\|861017_861833_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	5.5e-23	29.5
AXG87866.1\|861958_862921_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXG87867.1\|862901_863201_+	hypothetical protein	NA	NA	NA	NA
AXG90008.1\|863217_863508_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
AXG87868.1\|863662_864343_-	peptide ABC transporter permease	NA	NA	NA	NA
AXG87869.1\|864381_865023_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
AXG87870.1\|865024_865174_-	peptidase	NA	NA	NA	NA
AXG87871.1\|865520_866297_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXG87872.1\|866439_866640_+	hypothetical protein	NA	NA	NA	NA
AXG87873.1\|867068_867377_+	50S ribosomal protein L21	NA	NA	NA	NA
AXG87874.1\|867409_867754_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
AXG87875.1\|867766_868054_+	50S ribosomal protein L27	NA	NA	NA	NA
868026:868053	attL	NA	NA	NA	NA
AXG87876.1\|868141_869296_-\|integrase	site-specific integrase	Q9AZK8	Lactococcus_phage	2.2e-65	36.1
AXG87877.1\|869364_869934_-	DUF3221 domain-containing protein	NA	NA	NA	NA
AXG87878.1\|870114_870546_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AXG87879.1\|870560_870974_-	XRE family transcriptional regulator	A0A0M4QX29	Bacillus_phage	3.6e-31	53.2
AXG87880.1\|871206_871416_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXG87881.1\|871419_871704_+	hypothetical protein	NA	NA	NA	NA
AXG87882.1\|871717_872440_+	phage regulatory protein	D2IYT0	Enterococcus_phage	1.9e-43	64.0
AXG87883.1\|872479_872662_-	DUF1508 domain-containing protein	NA	NA	NA	NA
AXG87884.1\|872714_872909_+	hypothetical protein	D2IZ57	Enterococcus_phage	1.9e-27	90.6
AXG87885.1\|872899_873085_+	hypothetical protein	D2IZ58	Enterococcus_phage	3.6e-23	94.7
AXG87886.1\|873128_873452_+	hypothetical protein	D2IYT5	Enterococcus_phage	7.7e-45	86.9
AXG87887.1\|873451_873679_+	hypothetical protein	D2IZX4	Enterococcus_phage	8.6e-35	97.3
AXG87888.1\|873678_873780_+	hypothetical protein	D2IYT7	Enterococcus_phage	3.2e-10	100.0
AXG87889.1\|873776_874718_+	endonuclease	D2IZK1	Enterococcus_phage	3.8e-177	99.7
AXG87890.1\|874720_875611_+	recombinase RecT	D2IYT9	Enterococcus_phage	1.3e-163	100.0
AXG87891.1\|875624_876587_+	DUF4373 domain-containing protein	D2IZR2	Enterococcus_phage	3.0e-169	100.0
AXG87892.1\|876590_876893_+	hypothetical protein	D2IZR3	Enterococcus_phage	1.6e-47	99.0
AXG87893.1\|876893_877193_+	hypothetical protein	D2IZY1	Enterococcus_phage	1.3e-43	90.9
AXG87894.1\|877210_877636_+	RusA family crossover junction endodeoxyribonuclease	D2IYU2	Enterococcus_phage	8.0e-58	80.0
AXG87895.1\|877914_878175_+	hypothetical protein	NA	NA	NA	NA
AXG87896.1\|878542_878959_+	autolysin	D2IZL7	Enterococcus_phage	1.6e-66	97.1
AXG87897.1\|881056_881287_+	hypothetical protein	NA	NA	NA	NA
AXG87898.1\|881511_881838_+	HNH endonuclease	C5J957	Streptococcus_phage	3.7e-31	65.9
AXG87899.1\|882027_882387_+	hypothetical protein	A0A0U4JV93	Exiguobacterium_phage	9.9e-17	48.5
AXG87900.1\|882391_884179_+\|terminase	terminase large subunit	Q9AZY8	Lactococcus_phage	2.6e-219	64.2
AXG87901.1\|884198_885410_+\|portal	phage portal protein	Q0H263	Geobacillus_phage	5.9e-138	59.6
AXG87902.1\|885406_885988_+\|head,protease	HK97 family phage prohead protease	Q0H262	Geobacillus_phage	7.6e-67	67.9
AXG87903.1\|885990_887259_+\|capsid	phage major capsid protein	Q0H261	Geobacillus_phage	1.3e-92	54.8
AXG87904.1\|887261_887405_+	hypothetical protein	NA	NA	NA	NA
AXG87905.1\|887431_887707_+	hypothetical protein	Q9AZY3	Lactococcus_phage	9.6e-12	44.4
AXG87906.1\|887699_888020_+\|head,tail	phage head-tail adapter protein	Q9AZY2	Lactococcus_phage	1.1e-19	46.9
AXG87907.1\|888012_888393_+	hypothetical protein	A0A1S5SFC4	Streptococcus_phage	5.9e-20	51.8
AXG87908.1\|888395_888713_+	hypothetical protein	Q9AZY0	Lactococcus_phage	1.8e-25	56.2
AXG87909.1\|888729_889329_+\|tail	phage tail protein	Q9AZX9	Lactococcus_phage	1.8e-71	68.6
AXG87910.1\|889331_889697_+	hypothetical protein	Q9AZX8	Lactococcus_phage	5.5e-39	67.2
AXG87911.1\|889701_889905_+	hypothetical protein	NA	NA	NA	NA
AXG87912.1\|889920_892443_+\|tail	phage tail tape measure protein	Q9AZX7	Lactococcus_phage	3.6e-89	32.3
AXG87913.1\|892447_893197_+\|tail	phage tail protein	Q9AZX6	Lactococcus_phage	1.1e-89	60.6
AXG87914.1\|893193_895992_+	CHAP domain-containing protein	Q9AZX5	Lactococcus_phage	3.4e-197	48.1
AXG87915.1\|896010_896892_+\|plate	phage baseplate upper protein	Q9AYV5	Lactococcus_phage	4.0e-11	26.6
AXG87916.1\|896884_897481_+	hypothetical protein	NA	NA	NA	NA
AXG87917.1\|897477_897765_+	hypothetical protein	NA	NA	NA	NA
AXG87918.1\|897764_898292_+	hypothetical protein	NA	NA	NA	NA
AXG87919.1\|898310_898685_+	hypothetical protein	NA	NA	NA	NA
AXG87920.1\|898684_898822_+	XkdX family protein	NA	NA	NA	NA
AXG87921.1\|898855_899077_+	hypothetical protein	D2J019	Enterococcus_phage	3.9e-32	95.9
AXG87922.1\|899069_899303_+\|holin	phage holin	D2J020	Enterococcus_phage	1.9e-29	87.8
AXG87923.1\|899303_900545_+	LysM peptidoglycan-binding domain-containing protein	A0A0S2MYF3	Enterococcus_phage	8.9e-174	73.3
AXG87924.1\|901381_901582_+	cold-shock protein	Q9AZD3	Lactococcus_phage	1.6e-24	80.3
905355:905382	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1219153 : 1236834

Enterococcus_phage(42.86%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG88222.1\|1219153_1221550_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	2.9e-19	23.8
AXG88223.1\|1221574_1221925_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
AXG88224.1\|1222207_1222681_-	toxin	A0A097BY56	Enterococcus_phage	1.1e-60	71.2
AXG88225.1\|1222727_1223210_-	helix-turn-helix domain-containing protein	R9QTP6	Staphylococcus_phage	2.6e-20	47.7
AXG88226.1\|1223378_1223561_+	hypothetical protein	NA	NA	NA	NA
AXG88227.1\|1223591_1224362_+	DnaD domain protein	A0A0K0MX39	Streptococcus_phage	2.5e-33	57.0
AXG88228.1\|1224380_1225223_+	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	5.7e-31	31.0
AXG88229.1\|1225225_1225318_+	hypothetical protein	NA	NA	NA	NA
AXG88230.1\|1225310_1225682_+	hypothetical protein	NA	NA	NA	NA
AXG88231.1\|1225701_1226109_+	transcriptional regulator	NA	NA	NA	NA
AXG88232.1\|1226354_1226747_+	hypothetical protein	NA	NA	NA	NA
AXG88233.1\|1226759_1227272_+\|tail	phage major tail protein, TP901-1 family	W6LP72	Streptococcus_phage	5.2e-35	49.4
AXG88234.1\|1227304_1227664_+	hypothetical protein	A0A0F6N4J9	Staphylococcus_phage	7.6e-09	32.2
AXG88235.1\|1227681_1228050_+	hypothetical protein	Q38180	Lactococcus_phage	3.3e-07	32.0
AXG88236.1\|1228039_1230973_+	hypothetical protein	A0A1U9WR55	Streptococcus_virus	2.5e-09	25.0
AXG88237.1\|1230974_1231901_+\|tail	phage tail family protein	C9E2K5	Enterococcus_phage	1.2e-146	78.6
AXG88238.1\|1231913_1233371_+	hypothetical protein	C9E2K6	Enterococcus_phage	4.2e-175	47.7
AXG88239.1\|1233403_1235173_+	hypothetical protein	A0A097BYA8	Enterococcus_phage	9.8e-142	71.8
AXG88240.1\|1235196_1235592_+\|holin	holin	F0PIJ6	Enterococcus_phage	2.8e-33	48.9
AXG88241.1\|1235736_1236834_+	N-acetylmuramoyl-L-alanine amidase	A0A139ZVY1	Enterococcus_phage	4.0e-77	44.6

DBSCAN-SWA_5

1693876 : 1739449

Streptococcus_phage(53.33%)

protease,transposase,integrase

attL 1694077:1694092|attR 1716917:1716932

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG88659.1\|1693876_1694731_-\|protease	serine protease	NA	NA	NA	NA
1694077:1694092	attL	NA	NA	NA	NA
AXG88660.1\|1694779_1696312_-	peptidase M4 family protein	NA	NA	NA	NA
AXG88661.1\|1696546_1697617_-	GHKL domain-containing protein	NA	NA	NA	NA
AXG88662.1\|1697546_1698074_-	HD domain-containing protein	NA	NA	NA	NA
AXG88663.1\|1698291_1699197_+	polysaccharide deacetylase	NA	NA	NA	NA
AXG88664.1\|1699370_1699787_-	hypothetical protein	NA	NA	NA	NA
AXG88665.1\|1700398_1700581_-	hypothetical protein	NA	NA	NA	NA
AXG88666.1\|1700701_1700803_+	hypothetical protein	NA	NA	NA	NA
AXG88667.1\|1700944_1702123_-\|integrase	site-specific integrase	S6C485	Thermus_phage	2.0e-29	30.3
AXG88668.1\|1702225_1702537_-	DNA-binding protein	NA	NA	NA	NA
AXG88669.1\|1702885_1703131_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXG88670.1\|1703124_1703526_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXG88671.1\|1706090_1707353_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AXG88672.1\|1707490_1707715_+	hypothetical protein	NA	NA	NA	NA
AXG88673.1\|1707711_1707876_+	hypothetical protein	NA	NA	NA	NA
AXG88674.1\|1707969_1709262_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.9e-31	40.4
AXG88675.1\|1709535_1709796_-	hypothetical protein	NA	NA	NA	NA
AXG88676.1\|1710400_1711562_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.0e-79	51.3
AXG90035.1\|1711634_1711841_+\|transposase	transposase	U5P429	Shigella_phage	2.0e-06	53.3
AXG88677.1\|1711844_1711958_+	hypothetical protein	NA	NA	NA	NA
AXG88678.1\|1712110_1712506_-	aspartate 1-decarboxylase	NA	NA	NA	NA
AXG88679.1\|1712518_1713367_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AXG88680.1\|1713381_1714209_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	M4QNT1	Ostreococcus_lucimarinus_virus	5.4e-50	38.0
AXG88681.1\|1714220_1715066_-	DUF2520 domain-containing protein	NA	NA	NA	NA
AXG88682.1\|1716813_1718133_-	sensor histidine kinase	NA	NA	NA	NA
1716917:1716932	attR	NA	NA	NA	NA
AXG88683.1\|1718129_1718783_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	4.0e-24	33.2
AXG88684.1\|1718844_1718985_-	RNA helicase	NA	NA	NA	NA
AXG88685.1\|1720353_1721730_-	ABC transporter permease	NA	NA	NA	NA
AXG88686.1\|1721729_1722386_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-22	32.1
AXG88687.1\|1724499_1724910_-	hypothetical protein	NA	NA	NA	NA
AXG88688.1\|1725154_1725442_+	hypothetical protein	NA	NA	NA	NA
AXG88689.1\|1725442_1725670_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
AXG88690.1\|1725740_1726931_+\|transposase	IS256 family transposase	NA	NA	NA	NA
AXG88691.1\|1727965_1728970_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	1.4e-121	66.3
AXG88692.1\|1728966_1731090_-	FUSC family protein	A0A1S5SF30	Streptococcus_phage	2.4e-174	58.7
AXG88693.1\|1731094_1733542_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	76.4
AXG90036.1\|1733528_1733918_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	2.5e-42	66.7
AXG88694.1\|1733981_1734710_+	hypothetical protein	NA	NA	NA	NA
AXG88695.1\|1734716_1735544_-	hypothetical protein	NA	NA	NA	NA
AXG88696.1\|1735617_1736121_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	3.1e-56	61.2
AXG88697.1\|1736133_1736355_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.5e-28	87.7
AXG88698.1\|1736751_1738002_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	6.1e-114	62.1
AXG88699.1\|1738133_1738268_-	DUF3789 domain-containing protein	NA	NA	NA	NA
AXG88700.1\|1738264_1739449_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	1.0e-142	62.1

DBSCAN-SWA_6

1870716 : 1882056

Enterococcus_phage(50.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG88828.1\|1870716_1871787_-	methionine import ATP-binding protein MetN 1	G9BWD6	Planktothrix_phage	6.8e-29	34.7
AXG88829.1\|1873144_1873393_+	hypothetical protein	A0A097BYB1	Enterococcus_phage	6.1e-34	91.5
AXG88830.1\|1873411_1874380_-\|protease	CAAX protease	A0A059NT88	Lactococcus_phage	1.3e-79	43.5
AXG90042.1\|1875190_1876177_-	endolysin	F0PIJ7	Enterococcus_phage	4.7e-85	67.6
AXG88831.1\|1876163_1876442_-\|holin	holin	NA	NA	NA	NA
AXG88832.1\|1876441_1876696_-	hypothetical protein	NA	NA	NA	NA
AXG88833.1\|1876708_1877128_-	XkdX family protein	F0PIJ5	Enterococcus_phage	1.1e-56	85.4
AXG88834.1\|1877115_1878303_-	collagen-like protein	F0PIJ4	Enterococcus_phage	8.8e-62	65.4
AXG88835.1\|1878289_1878778_-	hypothetical protein	A0A1W6JI16	Lactococcus_phage	8.4e-35	46.0
AXG90043.1\|1878790_1879480_-	hypothetical protein	NA	NA	NA	NA
AXG88836.1\|1879479_1882056_-	endolysin	A0A1B1IM47	Lactococcus_phage	1.3e-30	46.6

DBSCAN-SWA_7

1900326 : 1913541

Enterococcus_phage(58.82%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG88854.1\|1900326_1900746_-	hypothetical protein	A0A2H4J1L3	uncultured_Caudovirales_phage	4.7e-18	51.0
AXG88855.1\|1900735_1901932_-	DNA modification methylase	Q708N6	Streptococcus_phage	1.8e-110	51.1
AXG88856.1\|1902339_1902765_-	ArpU family transcriptional regulator	D2IYV6	Enterococcus_phage	9.9e-24	42.3
AXG88857.1\|1902910_1903036_-	hypothetical protein	NA	NA	NA	NA
AXG88858.1\|1903063_1903264_-	hypothetical protein	D2IYV2	Enterococcus_phage	2.4e-28	89.4
AXG88859.1\|1903264_1903750_-	hypothetical protein	C9E2P0	Enterococcus_phage	1.7e-88	98.1
AXG88860.1\|1903746_1904271_-	DUF1642 domain-containing protein	D2IZZ0	Enterococcus_phage	2.4e-35	51.1
AXG88861.1\|1904252_1904609_-	hypothetical protein	F0PIH7	Enterococcus_phage	5.3e-47	78.4
AXG88862.1\|1904605_1904872_-	hypothetical protein	A0A059T7S7	Listeria_phage	4.4e-14	48.3
AXG90045.1\|1904964_1905192_-	hypothetical protein	NA	NA	NA	NA
AXG88863.1\|1905242_1905422_-	hypothetical protein	D2IYU5	Enterococcus_phage	1.1e-13	100.0
AXG88864.1\|1905478_1906114_-	DUF2187 domain-containing protein	D2IZY3	Enterococcus_phage	2.3e-69	89.2
AXG88865.1\|1906127_1906460_-	hypothetical protein	A0A0S2MYB8	Enterococcus_phage	8.0e-21	55.7
AXG88866.1\|1906456_1906882_-	RusA family crossover junction endodeoxyribonuclease	D2IYU2	Enterococcus_phage	1.2e-58	80.4
AXG88867.1\|1906890_1907760_-	AAA family ATPase	U5PWH5	Bacillus_phage	3.6e-20	29.1
AXG88868.1\|1907773_1908640_-	DUF4373 domain-containing protein	D2IZY0	Enterococcus_phage	2.8e-49	46.3
AXG88869.1\|1908653_1909466_-	hypothetical protein	J7KGZ1	Streptococcus_phage	1.9e-63	50.8
AXG88870.1\|1909431_1910355_-	recombinase RecT	A0A1S5S8V5	Streptococcus_phage	1.2e-66	53.6
AXG88871.1\|1910344_1910677_-	hypothetical protein	NA	NA	NA	NA
AXG88872.1\|1910707_1910998_-	hypothetical protein	NA	NA	NA	NA
AXG88873.1\|1911082_1911409_-	hypothetical protein	NA	NA	NA	NA
AXG88874.1\|1911409_1911619_-	hypothetical protein	NA	NA	NA	NA
AXG88875.1\|1911637_1911748_-	hypothetical protein	NA	NA	NA	NA
AXG88876.1\|1911761_1912013_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG88877.1\|1912027_1912555_-	hypothetical protein	NA	NA	NA	NA
AXG88878.1\|1912825_1913011_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG88879.1\|1913163_1913541_+	XRE family transcriptional regulator	A0A2P1JU09	Anoxybacillus_phage	1.2e-12	37.0

DBSCAN-SWA_8

2064959 : 2075970

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG89007.1\|2064959_2065982_-	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	3.6e-120	65.4
AXG89008.1\|2065978_2068093_-	FUSC family protein	A0A1S5SF30	Streptococcus_phage	7.0e-179	60.5
AXG89009.1\|2068098_2070546_-	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	75.0
AXG89010.1\|2070532_2070922_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	1.8e-43	68.3
AXG89011.1\|2070998_2071613_+	hypothetical protein	NA	NA	NA	NA
AXG89012.1\|2071628_2072201_+	hypothetical protein	NA	NA	NA	NA
AXG89013.1\|2072233_2072734_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	6.8e-48	56.1
AXG89014.1\|2072746_2072968_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.5e-28	87.7
AXG89015.1\|2072972_2073110_-	DUF3789 domain-containing protein	NA	NA	NA	NA
AXG89016.1\|2073106_2074291_-	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	8.0e-140	61.1
AXG89017.1\|2074547_2074802_-	hypothetical protein	NA	NA	NA	NA
AXG89018.1\|2074827_2075970_-	DNA (cytosine-5-)-methyltransferase	A0A1S5SEK0	Streptococcus_phage	1.4e-120	59.7

DBSCAN-SWA_9

2390432 : 2465517

Enterococcus_phage(31.71%)

holin,head,protease,portal,transposase,lysis,capsid,tRNA,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG89312.1\|2390432_2390939_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
AXG89313.1\|2391250_2392096_-	methyltransferase domain-containing protein	NA	NA	NA	NA
AXG89314.1\|2392014_2392233_+	hypothetical protein	NA	NA	NA	NA
AXG89315.1\|2392225_2392855_+	copper homeostasis protein CutC	NA	NA	NA	NA
AXG89316.1\|2392972_2394334_-	magnesium transporter	NA	NA	NA	NA
AXG89317.1\|2394364_2395258_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AXG89318.1\|2395265_2396063_-	NAD(+) kinase	NA	NA	NA	NA
AXG89319.1\|2396075_2396780_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
AXG89320.1\|2396946_2397525_+	CYTH domain-containing protein	NA	NA	NA	NA
AXG89321.1\|2397588_2398248_+	DsbA family protein	NA	NA	NA	NA
AXG90064.1\|2398530_2399226_-	XRE family transcriptional regulator	A0A0A7AQV8	Bacillus_phage	7.6e-05	42.3
AXG89322.1\|2399440_2401252_-	oligoendopeptidase F	NA	NA	NA	NA
AXG89323.1\|2401299_2402484_-	competence protein ComA	NA	NA	NA	NA
AXG89324.1\|2402572_2403235_-	adapter protein MecA	NA	NA	NA	NA
AXG89325.1\|2403577_2403976_-	transcriptional regulator Spx	NA	NA	NA	NA
AXG89326.1\|2404335_2405346_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AXG89327.1\|2405388_2406726_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.0e-47	32.5
AXG89328.1\|2406834_2407083_+	hypothetical protein	A0A0S2MYI8	Enterococcus_phage	2.9e-36	97.6
AXG89329.1\|2407238_2407907_-	hypothetical protein	NA	NA	NA	NA
AXG89330.1\|2407911_2408289_-	hypothetical protein	NA	NA	NA	NA
AXG89331.1\|2408272_2409121_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	2.6e-31	38.4
AXG89332.1\|2409303_2410410_-	N-acetylmuramoyl-L-alanine amidase	V5URN7	Enterococcus_phage	1.2e-84	47.7
AXG89333.1\|2410463_2410862_-\|holin	holin	F0PIJ6	Enterococcus_phage	1.6e-36	54.2
AXG89334.1\|2410911_2411715_-	hypothetical protein	D2IYX9	Enterococcus_phage	5.9e-118	83.1
AXG89335.1\|2411726_2412782_-	structural protein	D2J073	Enterococcus_phage	6.9e-50	37.2
AXG89336.1\|2412792_2413917_-	hypothetical protein	Q77MU2	Lactococcus_phage	2.0e-87	45.3
AXG89337.1\|2413919_2414819_-\|tail	phage tail family protein	D2J071	Enterococcus_phage	2.9e-49	37.4
AXG89338.1\|2414818_2419570_-\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	7.2e-14	43.0
AXG89339.1\|2419791_2420139_-	hypothetical protein	NA	NA	NA	NA
AXG89340.1\|2420195_2420669_-\|tail	phage tail protein	A0A1D6Z291	Staphylococcus_phage	7.9e-22	44.4
AXG89341.1\|2420742_2421336_-\|tail	phage tail protein	A0A060AKE9	Staphylococcus_phage	2.6e-22	35.1
AXG89342.1\|2421368_2421764_-	hypothetical protein	A8ATA3	Listeria_phage	9.8e-18	45.0
AXG89343.1\|2421760_2422153_-	hypothetical protein	A0A1S5SF89	Streptococcus_phage	1.3e-09	38.5
AXG89344.1\|2422149_2422524_-\|head,tail	phage head-tail adapter protein	A8ATA1	Listeria_phage	1.5e-28	52.1
AXG89345.1\|2422510_2422816_-	hypothetical protein	A0A0U4K528	Bacillus_phage	2.2e-09	47.5
AXG89346.1\|2422893_2424039_-\|capsid	phage major capsid protein	A8AT98	Listeria_phage	2.1e-116	56.5
AXG89347.1\|2424065_2424839_-\|protease	Clp protease ClpP	A0A2P0ZLE3	Lactobacillus_phage	3.4e-54	50.4
AXG89348.1\|2424810_2425986_-\|portal	phage portal protein	A0A068A211	Staphylococcus_phage	6.0e-79	41.3
AXG89349.1\|2426018_2426201_-	hypothetical protein	NA	NA	NA	NA
AXG89350.1\|2426395_2428036_-\|terminase	terminase large subunit	A0A1S5SF58	Streptococcus_phage	3.7e-183	58.9
AXG89351.1\|2428032_2428386_-	hypothetical protein	A0A2H4JAH7	uncultured_Caudovirales_phage	2.7e-35	67.8
AXG89352.1\|2428556_2428808_-	hypothetical protein	NA	NA	NA	NA
AXG89353.1\|2428804_2429530_-	hypothetical protein	NA	NA	NA	NA
AXG89354.1\|2429520_2429832_-	HNH endonuclease	A0A1S5SFB3	Streptococcus_phage	2.7e-31	63.1
AXG89355.1\|2429824_2430139_-	hypothetical protein	NA	NA	NA	NA
AXG89356.1\|2430131_2430320_-	hypothetical protein	NA	NA	NA	NA
AXG89357.1\|2430813_2431452_-	ArpU family transcriptional regulator	D7RWH7	Brochothrix_phage	6.5e-11	29.9
AXG89358.1\|2431510_2431822_-	hypothetical protein	NA	NA	NA	NA
AXG89359.1\|2431842_2432172_-	PcfU	D2IYU7	Enterococcus_phage	2.2e-55	97.2
AXG89360.1\|2432180_2432387_-	hypothetical protein	A0A1B1V001	Enterococcus_phage	7.4e-25	96.8
AXG89361.1\|2432396_2432789_-	hypothetical protein	A0A0S2MYE6	Enterococcus_phage	1.8e-67	95.4
AXG89362.1\|2432986_2433286_-	hypothetical protein	D2IZY1	Enterococcus_phage	5.5e-37	80.8
AXG89363.1\|2433306_2433783_-	hypothetical protein	NA	NA	NA	NA
AXG89364.1\|2433757_2434012_-	hypothetical protein	NA	NA	NA	NA
AXG89365.1\|2434014_2434527_-	recombination protein U	A0A2K9V2V4	Faecalibacterium_phage	1.8e-24	42.8
AXG89366.1\|2434516_2434837_-	hypothetical protein	NA	NA	NA	NA
AXG89367.1\|2434833_2435649_-	hypothetical protein	Q0SPI6	Clostridium_phage	6.3e-27	34.2
AXG89368.1\|2435875_2436628_-	hypothetical protein	A0A1S5S8N0	Streptococcus_phage	5.1e-47	43.6
AXG89369.1\|2436647_2437106_-	hypothetical protein	A0A097BY30	Enterococcus_phage	3.7e-24	45.4
AXG90065.1\|2437162_2437441_-	hypothetical protein	A0A0A7S062	Clostridium_phage	1.3e-13	52.2
AXG89370.1\|2437434_2437662_-	hypothetical protein	D2IZX4	Enterococcus_phage	3.2e-13	55.4
AXG89371.1\|2437658_2437973_-	hypothetical protein	NA	NA	NA	NA
AXG89372.1\|2438556_2439105_+	hypothetical protein	NA	NA	NA	NA
AXG89373.1\|2439473_2440064_+	hypothetical protein	NA	NA	NA	NA
AXG89374.1\|2440422_2440659_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXG89375.1\|2440797_2441271_+	XRE family transcriptional regulator	A0A1S5S8T5	Streptococcus_phage	1.6e-19	49.2
AXG89376.1\|2441288_2441753_+	toxin	R4IBK9	Listeria_phage	8.6e-13	39.6
AXG89377.1\|2441841_2442417_+	hypothetical protein	A0A097BY58	Enterococcus_phage	3.9e-07	38.8
AXG89378.1\|2442479_2443892_+	recombinase family protein	D7RWL2	Brochothrix_phage	1.7e-99	43.7
AXG89379.1\|2443875_2444295_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
AXG89380.1\|2444622_2445336_+	HAD family hydrolase	NA	NA	NA	NA
AXG89381.1\|2445406_2446808_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	5.4e-34	42.8
AXG89382.1\|2446889_2447915_-	DUF916 and DUF3324 domain-containing protein	NA	NA	NA	NA
AXG89383.1\|2447989_2448766_-	WxL domain-containing protein	NA	NA	NA	NA
AXG89384.1\|2448805_2449588_-	WxL domain-containing protein	NA	NA	NA	NA
AXG89385.1\|2449589_2449958_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AXG89386.1\|2449961_2452133_-	hypothetical protein	NA	NA	NA	NA
AXG89387.1\|2452322_2453246_-	hypothetical protein	NA	NA	NA	NA
AXG89388.1\|2453295_2456493_-	Snf2 family helicase	A0A160DDK8	Gordonia_phage	4.5e-36	26.8
AXG89389.1\|2456512_2459650_-	SMC family ATPase	NA	NA	NA	NA
AXG89390.1\|2459654_2460791_-	exonuclease SbcCD subunit D	NA	NA	NA	NA
AXG89391.1\|2460974_2461601_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AXG89392.1\|2462512_2462779_+	GIY-YIG nuclease family protein	A0A1V0SLS6	Klosneuvirus	4.9e-05	39.1
AXG89393.1\|2462845_2463541_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
AXG89394.1\|2463556_2463853_-	hypothetical protein	NA	NA	NA	NA
AXG89395.1\|2463849_2464446_-	NUDIX hydrolase	NA	NA	NA	NA
AXG89396.1\|2464836_2465517_+\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA

DBSCAN-SWA_10

2515322 : 2525062

Streptococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG89446.1\|2515322_2517506_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	3.1e-286	66.8
AXG89447.1\|2517538_2518135_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	6.0e-51	56.4
AXG89448.1\|2518179_2519298_-	DNA polymerase IV	NA	NA	NA	NA
AXG89449.1\|2519423_2520182_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
AXG89450.1\|2520165_2520828_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	5.1e-19	31.6
AXG89451.1\|2520842_2521715_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.1e-80	57.2
AXG89452.1\|2521826_2522174_-	initiation-control protein YabA	M1PFV3	Streptococcus_phage	8.1e-16	36.7
AXG89453.1\|2522166_2523006_-	signal peptidase	NA	NA	NA	NA
AXG89454.1\|2523122_2524073_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	1.4e-33	33.0
AXG89455.1\|2524074_2524404_-	hypothetical protein	NA	NA	NA	NA
AXG89456.1\|2524423_2525062_-	thymidylate kinase	M1PSC7	Streptococcus_phage	2.1e-54	53.8

DBSCAN-SWA_11

2546336 : 2594273

Enterococcus_phage(41.03%)

holin,head,protease,portal,capsid,tRNA,tail,integrase,terminase

attL 2558386:2558401|attR 2594909:2594924

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG89481.1\|2546336_2547047_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
AXG89482.1\|2547057_2547600_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AXG89483.1\|2547686_2548457_-	alpha/beta fold hydrolase	NA	NA	NA	NA
AXG89484.1\|2548446_2548653_+	hypothetical protein	NA	NA	NA	NA
AXG89485.1\|2548622_2549198_+	DUF805 domain-containing protein	NA	NA	NA	NA
AXG89486.1\|2549303_2550854_+	hypothetical protein	NA	NA	NA	NA
AXG89487.1\|2550874_2551939_+	DUF4950 domain-containing protein	C9E2L5	Enterococcus_phage	5.7e-20	51.5
AXG89488.1\|2552198_2553263_-	FUSC family protein	NA	NA	NA	NA
AXG90068.1\|2553518_2553716_-	hypothetical protein	NA	NA	NA	NA
AXG89489.1\|2554273_2554723_-	hypothetical protein	NA	NA	NA	NA
AXG89490.1\|2554722_2555004_-	hypothetical protein	NA	NA	NA	NA
AXG89491.1\|2555000_2555582_-	hypothetical protein	NA	NA	NA	NA
AXG89492.1\|2555987_2557289_-	LysM peptidoglycan-binding domain-containing protein	D2J077	Enterococcus_phage	2.5e-227	93.5
AXG89493.1\|2557289_2557679_-\|holin	holin	A0A097QQ04	Enterococcus_phage	2.9e-38	65.1
AXG89494.1\|2557718_2560208_-	SGNH/GDSL hydrolase family protein	A0A0S2SXG8	Bacillus_phage	3.8e-06	22.1
2558386:2558401	attL	NA	NA	NA	NA
AXG89495.1\|2560152_2562990_-	CHAP domain-containing protein	D7RWE0	Brochothrix_phage	1.9e-86	43.2
AXG89496.1\|2562986_2563691_-\|tail	phage tail protein	NA	NA	NA	NA
AXG89497.1\|2563693_2565991_-\|tail	phage tail tape measure protein	V5UPR9	Enterococcus_phage	3.1e-79	56.0
AXG89498.1\|2566182_2566638_-	hypothetical protein	A0A2H4J956	uncultured_Caudovirales_phage	3.4e-14	37.4
AXG89499.1\|2566637_2567282_-\|tail	phage tail protein	A0A2H4JGN2	uncultured_Caudovirales_phage	9.1e-29	34.1
AXG89500.1\|2567278_2567641_-	hypothetical protein	NA	NA	NA	NA
AXG89501.1\|2567630_2567969_-	hypothetical protein	A0A1B0T6B7	Bacillus_phage	1.9e-25	52.3
AXG89502.1\|2567958_2568285_-\|head,tail	phage head-tail joining protein	A0A0N7IRA3	Lactobacillus_phage	1.3e-20	52.4
AXG89503.1\|2568262_2568544_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B1P7M9	Bacillus_phage	7.2e-23	64.3
AXG89504.1\|2568545_2569910_-\|capsid	phage major capsid protein	A0A1B2APY9	Phage_Wrath	2.2e-125	67.6
AXG89505.1\|2569922_2570495_-\|head,protease	HK97 family phage prohead protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	1.1e-62	62.4
AXG89506.1\|2570466_2571693_-\|portal	phage portal protein	A0A2H4J9C7	uncultured_Caudovirales_phage	4.6e-146	65.8
AXG89507.1\|2571711_2573439_-\|terminase	terminase large subunit	A0A2H4JDG5	uncultured_Caudovirales_phage	3.5e-253	70.4
AXG89508.1\|2573435_2573888_-\|terminase	terminase small subunit	A0A2H4JFK0	uncultured_Caudovirales_phage	8.0e-48	68.5
AXG89509.1\|2574135_2574513_-	HNH endonuclease	A0A1B0T6C5	Bacillus_phage	1.5e-44	69.1
AXG89510.1\|2574512_2574920_-	hypothetical protein	A0A1B1P7N8	Bacillus_phage	2.9e-12	38.6
AXG89511.1\|2575442_2575910_-	ArpU family transcriptional regulator	D7RWH7	Brochothrix_phage	2.9e-08	27.8
AXG89512.1\|2576109_2576301_+	hypothetical protein	D2IYV5	Enterococcus_phage	6.6e-28	100.0
AXG89513.1\|2576297_2576501_-	hypothetical protein	D2IZL5	Enterococcus_phage	8.8e-31	92.5
AXG89514.1\|2576662_2577190_-	DUF1642 domain-containing protein	D2IZL3	Enterococcus_phage	1.8e-43	55.3
AXG89515.1\|2577203_2577482_-	hypothetical protein	A0A0S2MYC7	Enterococcus_phage	6.9e-42	94.6
AXG89516.1\|2577769_2577886_-	hypothetical protein	NA	NA	NA	NA
AXG89517.1\|2577869_2578082_-	hypothetical protein	NA	NA	NA	NA
AXG89518.1\|2578041_2578227_-	hypothetical protein	NA	NA	NA	NA
AXG89519.1\|2578426_2578633_-	hypothetical protein	A0A1B1V001	Enterococcus_phage	4.8e-24	95.2
AXG89520.1\|2578648_2579254_-	hypothetical protein	NA	NA	NA	NA
AXG89521.1\|2579302_2579683_+	hypothetical protein	NA	NA	NA	NA
AXG89522.1\|2579683_2580154_-	DUF1064 domain-containing protein	A0A1I9KKZ1	Lactobacillus_phage	6.4e-32	46.6
AXG89523.1\|2580302_2580572_-	hypothetical protein	NA	NA	NA	NA
AXG89524.1\|2580710_2581562_-	ATP-binding protein	U5PVD6	Bacillus_phage	6.4e-22	33.3
AXG89525.1\|2581573_2582353_-	DnaD domain protein	Q6J1V6	Lactobacillus_phage	7.6e-38	58.5
AXG90069.1\|2582367_2583171_-	hypothetical protein	J7KGZ1	Streptococcus_phage	9.5e-60	49.8
AXG89526.1\|2583145_2584156_-	RecT protein	A0A1X9I5N6	Streptococcus_phage	9.7e-78	62.6
AXG89527.1\|2584152_2584254_-	hypothetical protein	D2IZX5	Enterococcus_phage	1.7e-06	90.3
AXG89528.1\|2584256_2584481_-	hypothetical protein	D2IZX4	Enterococcus_phage	3.7e-22	68.5
AXG89529.1\|2584477_2584777_-	hypothetical protein	NA	NA	NA	NA
AXG89530.1\|2584843_2585023_-	hypothetical protein	A0A0S2MY96	Enterococcus_phage	2.6e-18	77.2
AXG89531.1\|2585057_2585327_-	hypothetical protein	NA	NA	NA	NA
AXG89532.1\|2585402_2585717_+	hypothetical protein	NA	NA	NA	NA
AXG89533.1\|2585697_2585826_-	hypothetical protein	NA	NA	NA	NA
AXG89534.1\|2585841_2586018_-	XRE family transcriptional regulator	D2IZW2	Enterococcus_phage	1.3e-14	65.5
AXG89535.1\|2586105_2586384_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.2e-38	87.0
AXG89536.1\|2586785_2587172_+	XRE family transcriptional regulator	A0A097QQ00	Enterococcus_phage	2.3e-59	97.5
AXG89537.1\|2587190_2587535_+	ImmA/IrrE family metallo-endopeptidase	D2IZV8	Enterococcus_phage	8.0e-40	70.2
AXG89538.1\|2587593_2588322_+	ion transporter	A0A1B0Y2S3	Lactobacillus_phage	1.3e-15	50.8
AXG89539.1\|2588476_2589658_+\|integrase	site-specific integrase	Q9AZK8	Lactococcus_phage	1.9e-48	31.8
AXG89540.1\|2589760_2589910_-	50S ribosomal protein L33	NA	NA	NA	NA
AXG89541.1\|2590035_2592171_-	penicillin-binding protein 2	NA	NA	NA	NA
AXG89542.1\|2592335_2594273_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.1e-112	36.3
2594909:2594924	attR	NA	NA	NA	NA

DBSCAN-SWA_12

2907550 : 2947637

Enterobacteria_phage(14.29%)

holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG89825.1\|2907550_2908234_-\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
AXG89826.1\|2908230_2908650_-\|holin	antiholin-like protein LrgA	NA	NA	NA	NA
AXG89827.1\|2908801_2909530_-	DNA-binding response regulator	NA	NA	NA	NA
AXG89828.1\|2909510_2911280_-	sensor protein LytS	Q9EYF3	Enterobacteria_phage	3.2e-60	28.5
AXG89829.1\|2911371_2912190_-	hypothetical protein	NA	NA	NA	NA
AXG89830.1\|2912202_2912874_-	ABC transporter permease subunit	NA	NA	NA	NA
AXG89831.1\|2912870_2913593_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.2e-22	33.7
AXG90081.1\|2913954_2914347_-	OsmC family peroxiredoxin	NA	NA	NA	NA
AXG89832.1\|2914553_2914823_+	30S ribosomal protein S14	NA	NA	NA	NA
AXG89833.1\|2914933_2915083_+	50S ribosomal protein L33	NA	NA	NA	NA
AXG89834.1\|2915098_2916073_+	GTP-binding protein	NA	NA	NA	NA
AXG89835.1\|2916088_2916229_+	hypothetical protein	NA	NA	NA	NA
AXG89836.1\|2916249_2917785_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA
AXG89837.1\|2917842_2918817_-\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
AXG89838.1\|2919005_2919776_-	ABC transporter permease	NA	NA	NA	NA
AXG89839.1\|2919768_2920704_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.4e-22	29.4
AXG89840.1\|2920961_2921381_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA
AXG89841.1\|2921393_2921885_+	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA
AXG89842.1\|2921901_2922717_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
AXG89843.1\|2922713_2923541_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
AXG89844.1\|2923688_2926208_+	PRD domain-containing protein	NA	NA	NA	NA
AXG89845.1\|2926354_2926915_-	hypothetical protein	NA	NA	NA	NA
AXG89846.1\|2927093_2927486_-	30S ribosomal protein S9	NA	NA	NA	NA
AXG89847.1\|2927499_2927943_-	50S ribosomal protein L13	NA	NA	NA	NA
AXG89848.1\|2928004_2928112_+	hypothetical protein	NA	NA	NA	NA
AXG89849.1\|2928164_2928632_-	DNA starvation/stationary phase protection protein	C1KFH1	Lactobacillus_virus	1.0e-05	25.9
AXG89850.1\|2928759_2929479_-	DUF5105 domain-containing protein	NA	NA	NA	NA
AXG89851.1\|2929562_2931083_-	gluconate kinase	NA	NA	NA	NA
AXG89852.1\|2931191_2931884_+	prepilin peptidase	NA	NA	NA	NA
AXG89853.1\|2931933_2935587_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	1.4e-65	24.8
AXG89854.1\|2935753_2939377_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.0e-48	24.5
AXG89855.1\|2939385_2939565_-	hypothetical protein	NA	NA	NA	NA
AXG89856.1\|2939738_2940080_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5SAB3	Streptococcus_phage	5.5e-17	42.5
AXG89857.1\|2940079_2940310_-	AbrB family transcriptional regulator	NA	NA	NA	NA
AXG89858.1\|2940716_2940932_-	DNA-binding protein	NA	NA	NA	NA
AXG89859.1\|2941070_2942063_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AXG89860.1\|2942129_2942762_-	RloB domain-containing protein	NA	NA	NA	NA
AXG89861.1\|2942770_2944066_-	abortive infection protein	NA	NA	NA	NA
AXG89862.1\|2944091_2944226_-	hypothetical protein	NA	NA	NA	NA
AXG89863.1\|2944400_2944493_+	hypothetical protein	NA	NA	NA	NA
AXG89864.1\|2944527_2946144_+	phosphatase PAP2 family protein	NA	NA	NA	NA
AXG89865.1\|2946498_2946621_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AXG89866.1\|2946806_2947004_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AXG90082.1\|2947122_2947263_+\|holin	putative holin-like toxin	NA	NA	NA	NA
AXG89867.1\|2947493_2947637_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_13

3031188 : 3048726

Streptococcus_phage(100.0%)

integrase

attL 3026165:3026179|attR 3054976:3054990

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3026165:3026179	attL	NA	NA	NA	NA
AXG89928.1\|3031188_3031503_+	DUF961 domain-containing protein	A0A1S5SF38	Streptococcus_phage	5.2e-54	100.0
AXG89929.1\|3031518_3031905_+	DUF961 domain-containing protein	A0A1S5SF96	Streptococcus_phage	3.0e-64	100.0
AXG89930.1\|3031933_3033319_+	DNA translocase FtsK	A0A1S5SFB5	Streptococcus_phage	1.1e-265	100.0
AXG89931.1\|3033321_3033474_+	conjugal transfer protein	NA	NA	NA	NA
AXG89932.1\|3033496_3034702_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.8e-233	100.0
AXG89933.1\|3034744_3034966_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	4.3e-31	100.0
AXG89934.1\|3035082_3035580_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	1.7e-91	100.0
AXG89935.1\|3035554_3036061_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.6e-91	100.0
AXG89936.1\|3036044_3038492_+	ATP/GTP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	100.0
AXG89937.1\|3038494_3040672_+	YtxH domain-containing protein	A0A1S5SF30	Streptococcus_phage	0.0e+00	100.0
AXG89938.1\|3040668_3041670_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.0e-191	100.0
AXG89939.1\|3041666_3042599_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	3.1e-171	99.4
AXG89940.1\|3042873_3042960_+	tetracycline resistance protein	NA	NA	NA	NA
AXG89941.1\|3042975_3044895_+	tetracycline resistance ribosomal protection protein Tet(M)	A0A1S5SF82	Streptococcus_phage	0.0e+00	99.5
AXG89942.1\|3044995_3045181_+	conjugal transfer protein	D0R0F6	Streptococcus_phage	3.9e-17	67.9
AXG89943.1\|3045240_3045594_-	XRE family transcriptional regulator	A0A1S5SFA6	Streptococcus_phage	1.3e-58	100.0
AXG90085.1\|3045798_3045870_+	hypothetical protein	NA	NA	NA	NA
AXG89944.1\|3046098_3046521_+	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	2.5e-72	100.0
AXG89945.1\|3046517_3046763_+	helix-turn-helix domain-containing protein	A0A1S5SEX1	Streptococcus_phage	2.7e-34	93.8
AXG89946.1\|3046988_3047240_-	hypothetical protein	NA	NA	NA	NA
AXG89947.1\|3047223_3047427_+	excisionase	A0A1S5SF07	Streptococcus_phage	4.0e-31	100.0
AXG89948.1\|3047508_3048726_+\|integrase	site-specific integrase	A0A1S5SEW7	Streptococcus_phage	3.7e-233	100.0
3054976:3054990	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP031028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 29252

Streptococcus_phage(85.71%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90088.1\|284_368_+	23S rRNA methyltransferase attenuator leader peptide ErmL	NA	NA	NA	NA
AXG90089.1\|492_1230_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	E4ZFQ0	Streptococcus_phage	7.0e-134	99.2
AXG90090.1\|1234_1366_+	hypothetical protein	E4ZFP9	Streptococcus_phage	7.9e-17	100.0
AXG90091.1\|2523_2769_+	DUF1413 domain-containing protein	NA	NA	NA	NA
AXG90092.1\|2871_3741_+	nucleotidyltransferase domain-containing protein	A0A1X9I6C9	Streptococcus_phage	4.3e-159	95.8
AXG90093.1\|3721_4456_+	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.5e-141	100.0
AXG90094.1\|4488_5397_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	E4ZFP8	Streptococcus_phage	2.8e-177	100.0
AXG90095.1\|5393_5936_+	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	8.9e-94	100.0
AXG90096.1\|6028_6823_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
AXG90097.1\|7455_7671_+	WYL domain-containing protein	E4ZFP5	Streptococcus_phage	3.4e-33	98.6
AXG90098.1\|7968_8865_+	hydrolase	A0A1X9I765	Streptococcus_phage	9.0e-152	97.2
AXG90099.1\|8963_9173_+	peptide-binding protein	A0A1X9I6D5	Streptococcus_phage	1.6e-30	97.1
AXG90100.1\|9189_9462_+	antitoxin	A0A1X9I6E5	Streptococcus_phage	5.4e-07	96.7
AXG90101.1\|9463_9859_+	zeta-toxin	NA	NA	NA	NA
AXG90102.1\|9880_10567_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-127	99.6
AXG90103.1\|10600_10852_-	hypothetical protein	NA	NA	NA	NA
AXG90104.1\|10894_11563_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXG90105.1\|11693_12707_-	replication protein RepA	NA	NA	NA	NA
AXG90106.1\|12966_13323_-	hypothetical protein	NA	NA	NA	NA
AXG90107.1\|13315_14098_-	ParA family protein	H7BUL8	unidentified_phage	3.8e-21	32.8
AXG90108.1\|14351_14642_-	type III secretion system protein PrgN	NA	NA	NA	NA
AXG90109.1\|14665_15352_-\|transposase	IS6-like element ISEnfa1 family transposase	A0A1X9I6C6	Streptococcus_phage	4.8e-113	88.5
AXG90110.1\|15384_16038_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.4e-114	96.2
AXG90111.1\|16408_16495_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
AXG90112.1\|16586_16802_-	excinuclease ABC subunit C	NA	NA	NA	NA
AXG90113.1\|17223_17877_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.4e-114	96.2
AXG90114.1\|17909_18596_+\|transposase	IS6-like element ISEnfa1 family transposase	A0A1X9I6C6	Streptococcus_phage	4.8e-113	88.5
AXG90115.1\|18792_19623_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
AXG90116.1\|19622_20372_-	ABC transporter permease	NA	NA	NA	NA
AXG90117.1\|20364_21282_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.6e-42	43.2
AXG90118.1\|21464_22079_-	XRE family transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	5.5e-07	46.8
AXG90119.1\|22068_22266_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXG90120.1\|22431_22596_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXG90121.1\|22628_23315_+\|transposase	IS6-like element ISEnfa1 family transposase	A0A1X9I6C6	Streptococcus_phage	4.8e-113	88.5
AXG90122.1\|23857_23944_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
AXG90123.1\|24128_24440_-	hypothetical protein	NA	NA	NA	NA
AXG90124.1\|24462_24663_-	hypothetical protein	NA	NA	NA	NA
AXG90125.1\|24751_26512_-	plasmid recombination protein	NA	NA	NA	NA
AXG90126.1\|26531_26723_+	hypothetical protein	NA	NA	NA	NA
AXG90127.1\|27208_27505_-	hypothetical protein	NA	NA	NA	NA
AXG90128.1\|27631_28354_-	RepB family plasmid replication initiator protein	NA	NA	NA	NA
AXG90129.1\|28565_29252_+\|transposase	IS6-like element ISEnfa1 family transposase	A0A1X9I6C6	Streptococcus_phage	4.8e-113	88.5

DBSCAN-SWA_2

32885 : 33344

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90136.1\|32885_33344_+	single-stranded DNA-binding protein	Q9B008	Lactococcus_phage	6.6e-42	59.2

DBSCAN-SWA_3

46412 : 54804

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90144.1\|46412_46829_+	single-stranded DNA-binding protein	A0A1S5S8L6	Streptococcus_phage	9.1e-22	50.5
AXG90145.1\|46852_47437_+	thermonuclease	O64020	Bacillus_phage	2.8e-37	54.7
AXG90146.1\|47547_47814_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
AXG90147.1\|47806_48082_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
AXG90148.1\|48884_49070_+	hypothetical protein	NA	NA	NA	NA
AXG90149.1\|49091_49238_+	PcfM protein	NA	NA	NA	NA
AXG90150.1\|49468_50248_+	hypothetical protein	NA	NA	NA	NA
AXG90151.1\|50247_51507_+	hypothetical protein	A8ATM0	Listeria_phage	2.4e-89	40.5
AXG90152.1\|51931_52117_+	hypothetical protein	NA	NA	NA	NA
AXG90153.1\|52156_52885_+	hypothetical protein	B5SP25	Lactococcus_phage	2.9e-63	54.1
AXG90179.1\|53095_53506_+	hypothetical protein	NA	NA	NA	NA
AXG90154.1\|53591_53930_+	hypothetical protein	NA	NA	NA	NA
AXG90155.1\|54144_54804_+	DUF2786 domain-containing protein	A0A172JHR5	Bacillus_phage	8.4e-14	31.7

DBSCAN-SWA_4

59656 : 65581

Pseudomonas_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90162.1\|59656_60802_+	glycosyltransferase family 2 protein	S5WBE2	Pseudomonas_phage	1.5e-05	37.5
AXG90163.1\|60893_62957_+	ATP-binding cassette domain-containing protein	A0A2H4UU96	Bodo_saltans_virus	2.5e-11	24.7
AXG90164.1\|62958_63369_+	thioredoxin	NA	NA	NA	NA
AXG90165.1\|63370_63895_+	thioredoxin	NA	NA	NA	NA
AXG90166.1\|64900_65581_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.3e-126	99.1

DBSCAN-SWA_5

70142 : 75063

Enterobacteria_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXG90171.1\|70142_70760_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	5.1e-13	33.1
AXG90172.1\|70800_71100_+	hypothetical protein	NA	NA	NA	NA
AXG90173.1\|71133_71301_+	transcriptional regulator	NA	NA	NA	NA
AXG90174.1\|71345_71951_-	recombinase family protein	A0A219YA40	Aeromonas_phage	1.2e-19	33.2
AXG90175.1\|72075_75063_+\|transposase	Tn3 family transposase	A0A125RQ78	Bacillus_phage	7.3e-206	38.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031029

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP031027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP031028

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection