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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP018219 Salmonella enterica subsp. enterica strain LSP 389/97, complete genome 0 crisprs DEDDh,RT,cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DinG 0 0 11 0
CP018220 Salmonella enterica subsp. enterica strain LSP 389/97 plasmid pUO-STmRV1, complete sequence 0 crisprs csa3,DEDDh 0 0 3 0

Results visualization

1. CP018219
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 337610 : 443212 112 Salmonella_phage(35.0%) capsid,head,integrase,portal,tRNA,terminase,lysis,transposase,tail attL 362155:362171|attR 451116:451132
DBSCAN-SWA_2 466036 : 500166 40 Cronobacter_phage(70.97%) capsid,head,holin,portal,integrase,terminase,tRNA,tail attL 462797:462812|attR 492174:492189
DBSCAN-SWA_3 1295870 : 1342913 48 Burkholderia_phage(42.86%) plate,tail,tRNA NA
DBSCAN-SWA_4 2849317 : 2895725 70 Enterobacteria_phage(78.26%) coat,integrase,portal,terminase,lysis,transposase,tail attL 2853150:2853163|attR 2862200:2862213
DBSCAN-SWA_5 3487203 : 3533414 41 uncultured_Mediterranean_phage(11.11%) tRNA,protease,transposase NA
DBSCAN-SWA_6 3545998 : 3628834 81 Salmonella_phage(46.15%) integrase,protease,portal,tRNA,tail,lysis,holin attL 3548907:3548926|attR 3620695:3620714
DBSCAN-SWA_7 4408500 : 4485402 105 Edwardsiella_phage(16.67%) integrase,head,protease,terminase,lysis,transposase,tail attL 4441304:4441318|attR 4483242:4483256
DBSCAN-SWA_8 4560852 : 4639512 107 Salmonella_phage(80.6%) plate,capsid,integrase,portal,terminase,transposase,tail attL 4567390:4567405|attR 4641135:4641150
DBSCAN-SWA_9 4726217 : 4736723 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_10 4805031 : 4814202 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_11 4886254 : 4898545 12 Salmonella_phage(41.67%) tail,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP018220
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 70 : 53545 55 Escherichia_phage(24.0%) transposase,integrase attL 14249:14263|attR 59114:59128
DBSCAN-SWA_2 69850 : 106647 45 Escherichia_phage(18.18%) head,transposase,tail NA
DBSCAN-SWA_3 132447 : 157379 25 Salmonella_phage(42.86%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage