CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP025809	Sulfitobacter sp. SK025 plasmid unnamed1, complete sequence	0 crisprs	NA	19
CP025808	Sulfitobacter sp. SK025 chromosome, complete genome	0 crisprs	cas3,csa3,WYL	4
CP025810	Sulfitobacter sp. SK025 plasmid unnamed2, complete sequence	0 crisprs	NA	16
CP025811	Sulfitobacter sp. SK025 plasmid unnamed3, complete sequence	0 crisprs	csa3,WYL	8
CP025814	Sulfitobacter sp. SK025 plasmid unnamed6, complete sequence	0 crisprs	NA	0
CP025812	Sulfitobacter sp. SK025 plasmid unnamed4, complete sequence	0 crisprs	csa3	2
CP025813	Sulfitobacter sp. SK025 plasmid unnamed5, complete sequence	0 crisprs	NA	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 39019

Leptospira_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52286.1\|0_1065_+	chromosome partitioning protein ParB	NA	NA	NA	NA
AXI52287.1\|1469_2564_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI52288.1\|2817_4209_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXI52586.1\|4208_4703_-	hypothetical protein	NA	NA	NA	NA
AXI52289.1\|5016_5700_+	hypothetical protein	NA	NA	NA	NA
AXI52290.1\|5715_6780_-	cytochrome C	NA	NA	NA	NA
AXI52291.1\|6793_7378_-	cytochrome-c oxidase	NA	NA	NA	NA
AXI52292.1\|7374_7782_-	hypothetical protein	NA	NA	NA	NA
AXI52293.1\|7778_10346_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
AXI52294.1\|10342_11344_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
AXI52295.1\|11340_12741_-	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
AXI52296.1\|12818_13436_-	DedA family protein	NA	NA	NA	NA
AXI52297.1\|13481_14228_-	cytochrome C	NA	NA	NA	NA
AXI52298.1\|14243_16025_-	GMC family oxidoreductase	NA	NA	NA	NA
AXI52299.1\|16028_16706_-	gluconate 2-dehydrogenase	NA	NA	NA	NA
AXI52300.1\|16934_17603_+	L,D-transpeptidase	NA	NA	NA	NA
AXI52301.1\|17685_17997_-	hypothetical protein	NA	NA	NA	NA
AXI52302.1\|18095_18587_-	MgtC/SapB family protein	NA	NA	NA	NA
AXI52587.1\|18754_19066_-	photosystem reaction center subunit H	NA	NA	NA	NA
AXI52303.1\|19325_19832_+	superoxide dismutase family protein	NA	NA	NA	NA
AXI52304.1\|19970_20216_+	DUF1289 domain-containing protein	NA	NA	NA	NA
AXI52305.1\|20260_20734_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AXI52306.1\|20843_21284_-	hypothetical protein	NA	NA	NA	NA
AXI52307.1\|21586_23680_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXI52308.1\|23679_24903_+	MFS transporter	NA	NA	NA	NA
AXI52309.1\|24895_25912_+	siderophore-interacting protein	NA	NA	NA	NA
AXI52310.1\|25986_27777_-	type I secretion protein	NA	NA	NA	NA
AXI52311.1\|28175_28925_-	transcriptional regulator SdiA	NA	NA	NA	NA
AXI52312.1\|29095_29974_+	glycosyl transferase family 2	NA	NA	NA	NA
AXI52313.1\|30083_30860_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
AXI52314.1\|30961_31399_+	enoyl-CoA hydratase	NA	NA	NA	NA
AXI52315.1\|31395_32301_+	cobalt transporter	NA	NA	NA	NA
AXI52316.1\|32411_33542_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXI52317.1\|33538_36619_+	AcrB/AcrD/AcrF family protein	S5VL66	Leptospira_phage	1.5e-07	20.7
AXI52318.1\|36712_37351_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AXI52319.1\|37483_39019_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	4.4e-29	28.6

DBSCAN-SWA_2

44540 : 45809

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52325.1\|44540_45809_-	histidine kinase	A0A1B0VMK3	Pseudomonas_phage	5.6e-06	24.7

DBSCAN-SWA_3

51744 : 60745

Leptospira_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52331.1\|51744_54804_-	MFS transporter	S5VTK5	Leptospira_phage	2.2e-32	21.2
AXI52332.1\|54807_55884_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXI52333.1\|55997_56615_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXI52334.1\|56581_57310_-	N-acyl-L-homoserine lactone synthetase	NA	NA	NA	NA
AXI52335.1\|57485_58877_+	sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.9e-23	27.4
AXI52336.1\|58858_60244_-	cytochrome	NA	NA	NA	NA
AXI52337.1\|60346_60745_-	type II toxin-antitoxin system death-on-curing family toxin	A0A1B3AYM0	Gordonia_phage	2.5e-05	41.4

DBSCAN-SWA_4

81423 : 86598

Brazilian_cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52356.1\|81423_82212_+	heme ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.8e-13	28.5
AXI52357.1\|82358_83459_+	histidine kinase	NA	NA	NA	NA
AXI52358.1\|83455_83830_+	response regulator	NA	NA	NA	NA
AXI52359.1\|83941_85177_+	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA
AXI52360.1\|85176_86598_+	uracil-DNA glycosylase	A0A127AW33	Bacillus_phage	3.2e-10	30.6

DBSCAN-SWA_5

120172 : 159483

Stx2-converting_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52389.1\|120172_123352_+	MFS transporter	S5VTK5	Leptospira_phage	2.6e-44	21.8
AXI52390.1\|123643_124099_-	hypothetical protein	NA	NA	NA	NA
AXI52594.1\|124313_125813_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AXI52391.1\|125809_126574_+	AAA family ATPase	A0A059NT77	Lactococcus_phage	6.7e-39	40.0
AXI52392.1\|126621_126915_-	hypothetical protein	A0A141GEZ3	Brucella_phage	4.1e-05	40.7
AXI52393.1\|126886_127444_-	hypothetical protein	NA	NA	NA	NA
AXI52394.1\|127440_127641_-	hypothetical protein	NA	NA	NA	NA
AXI52395.1\|128295_128574_-	hypothetical protein	NA	NA	NA	NA
AXI52396.1\|128774_129035_+	hypothetical protein	NA	NA	NA	NA
AXI52397.1\|129310_129607_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXI52398.1\|129928_130432_-	hypothetical protein	NA	NA	NA	NA
AXI52399.1\|133523_134045_-	hypothetical protein	NA	NA	NA	NA
AXI52400.1\|134874_135078_+	hypothetical protein	NA	NA	NA	NA
AXI52595.1\|135128_135329_-	KluB	NA	NA	NA	NA
AXI52401.1\|135468_135726_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
AXI52402.1\|136340_136748_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXI52403.1\|136744_137095_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.6e-27	52.8
AXI52404.1\|137155_138787_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	8.3e-95	42.6
AXI52405.1\|138789_139011_+	hypothetical protein	NA	NA	NA	NA
AXI52406.1\|139171_139759_-	hypothetical protein	NA	NA	NA	NA
AXI52407.1\|140371_140935_-	hypothetical protein	NA	NA	NA	NA
AXI52408.1\|140941_141238_-	hypothetical protein	NA	NA	NA	NA
AXI52409.1\|141773_142178_-	hypothetical protein	NA	NA	NA	NA
AXI52410.1\|142262_142637_-	hypothetical protein	NA	NA	NA	NA
AXI52411.1\|143437_143827_+	hypothetical protein	NA	NA	NA	NA
AXI52412.1\|143887_146116_-	hypothetical protein	NA	NA	NA	NA
AXI52413.1\|146548_148876_+	hypothetical protein	NA	NA	NA	NA
AXI52414.1\|149429_149918_+	hypothetical protein	NA	NA	NA	NA
AXI52415.1\|150043_150553_+	hypothetical protein	NA	NA	NA	NA
AXI52416.1\|150533_150761_-	hypothetical protein	NA	NA	NA	NA
AXI52596.1\|150980_152480_+\|transposase	IS21 family transposase	NA	NA	NA	NA
AXI52417.1\|152476_153241_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.6e-40	40.2
AXI52418.1\|153267_153456_+	hypothetical protein	NA	NA	NA	NA
AXI52419.1\|153617_154067_+	hypothetical protein	NA	NA	NA	NA
AXI52420.1\|154933_155935_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	5.4e-36	31.6
AXI52421.1\|156045_157056_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	5.8e-38	32.3
AXI52422.1\|157153_158146_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.0e-27	29.1
AXI52423.1\|158457_159483_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	1.6e-11	27.1

DBSCAN-SWA_6

164487 : 169977

Pike_perch_iridovirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52427.1\|164487_166086_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	6.2e-10	43.1
AXI52428.1\|166185_167016_-	KR domain-containing protein	Q06VL0	Trichoplusia_ni_ascovirus	4.0e-13	26.6
AXI52429.1\|167040_168225_-	lipid-transfer protein	NA	NA	NA	NA
AXI52430.1\|168369_169977_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	3.5e-13	58.7

DBSCAN-SWA_7

174698 : 176294

Pike_perch_iridovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52435.1\|174698_176294_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	1.9e-11	60.0

DBSCAN-SWA_8

181511 : 184935

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52599.1\|181511_183302_-	long-chain-fatty-acid--CoA ligase FadD	A0A1V0SBX8	Catovirus	2.1e-51	26.2
AXI52440.1\|183355_184147_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.9e-14	23.5
AXI52441.1\|184143_184935_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.2e-15	27.2

DBSCAN-SWA_9

189438 : 190293

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52444.1\|189438_190293_+	short-chain dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	4.0e-08	24.7

DBSCAN-SWA_10

193463 : 194225

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52449.1\|193463_194225_+	2-hydroxycyclohexanecarboxyl-CoA dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	2.9e-18	32.7

DBSCAN-SWA_11

197271 : 202096

Stx2-converting_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52454.1\|197271_197874_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.1e-17	32.3
AXI52455.1\|197870_199511_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-91	39.6
AXI52456.1\|199570_199921_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.9e-28	55.1
AXI52457.1\|199917_200313_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.1e-05	44.8
AXI52458.1\|200560_202096_-	acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.6e-31	26.1

DBSCAN-SWA_12

208789 : 213378

Pike_perch_iridovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52463.1\|208789_210397_+	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	1.0e-12	47.3
AXI52464.1\|210407_212414_+	biotin carboxylase	NA	NA	NA	NA
AXI52465.1\|212418_213378_+	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	5.0e-23	31.2

DBSCAN-SWA_13

217327 : 220115

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52603.1\|217327_218113_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.1e-11	21.6
AXI52469.1\|218138_220115_+	acyl-CoA synthetase	A0A1V0SBX8	Catovirus	5.1e-22	18.4

DBSCAN-SWA_14

223405 : 224197

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52473.1\|223405_224197_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.4e-10	25.8

DBSCAN-SWA_15

230682 : 233724

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52481.1\|230682_231285_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.1e-17	32.3
AXI52482.1\|231281_232922_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-91	39.6
AXI52483.1\|232981_233332_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.9e-28	55.1
AXI52484.1\|233328_233724_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.1e-05	44.8

DBSCAN-SWA_16

262832 : 263609

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52508.1\|262832_263609_+	3-oxoacyl-ACP reductase	A0A0K0KVL6	Prochlorococcus_phage	6.9e-07	31.1

DBSCAN-SWA_17

279088 : 331669

Stx2-converting_phage(14.29%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52522.1\|279088_279691_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.1e-17	32.3
AXI52523.1\|279687_281328_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-91	39.6
AXI52524.1\|281387_281738_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.9e-28	55.1
AXI52525.1\|281734_282130_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.1e-05	44.8
AXI52526.1\|282400_283198_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXI52527.1\|283194_283971_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXI52528.1\|284060_285311_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI52529.1\|285399_286602_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI52530.1\|286671_287484_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.2e-11	24.3
AXI52531.1\|287496_288570_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI52532.1\|288573_289461_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI52533.1\|289461_291396_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	2.6e-39	22.0
AXI52534.1\|291373_292177_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.7e-14	25.3
AXI52535.1\|292218_293073_-	short-chain dehydrogenase	A0A0N9R355	Chrysochromulina_ericina_virus	4.7e-17	25.0
AXI52536.1\|293347_293647_-	hypothetical protein	NA	NA	NA	NA
AXI52537.1\|293822_295037_-	CoA transferase	NA	NA	NA	NA
AXI52538.1\|295221_297396_-	twin-arginine translocation pathway signal protein	NA	NA	NA	NA
AXI52539.1\|297397_297856_-	isoquinoline 1-oxidoreductase	A0A0P0IVM8	Acinetobacter_phage	1.6e-11	35.4
AXI52540.1\|297877_298510_-	glutathione S-transferase	NA	NA	NA	NA
AXI52541.1\|298526_298952_-	hypothetical protein	NA	NA	NA	NA
AXI52542.1\|298939_299731_-	hypothetical protein	NA	NA	NA	NA
AXI52543.1\|300058_300790_-	ATPase	A0A2L1IVB6	Escherichia_phage	4.5e-32	37.9
AXI52608.1\|300786_302124_-\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	3.0e-26	28.8
AXI52609.1\|303089_304307_-\|transposase	transposase	NA	NA	NA	NA
AXI52544.1\|305317_306373_+	amine oxidase	NA	NA	NA	NA
AXI52545.1\|308410_309301_+	hypothetical protein	NA	NA	NA	NA
AXI52546.1\|309325_309757_+	IS66 family insertion sequence hypothetical protein	B6DZU5	Stx2-converting_phage	2.5e-06	26.4
AXI52547.1\|309753_310107_+	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	2.9e-13	37.6
AXI52548.1\|311362_312385_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXI52549.1\|313881_315090_+	alpha/beta hydrolase	NA	NA	NA	NA
AXI52550.1\|315153_315816_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	5.7e-18	37.7
AXI52551.1\|315932_316514_+	resolvase	A0A219Y9V9	Aeromonas_phage	2.2e-26	41.5
AXI52552.1\|316537_316792_+	hypothetical protein	NA	NA	NA	NA
AXI52553.1\|316913_317678_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	6.1e-40	40.4
AXI52610.1\|317674_319174_-\|transposase	IS21 family transposase	NA	NA	NA	NA
AXI52554.1\|319402_320467_-	glycine/betaine ABC transporter	G3M9Y6	Bacillus_virus	2.0e-28	37.4
AXI52555.1\|320477_321515_-	glycine/betaine ABC transporter permease	NA	NA	NA	NA
AXI52556.1\|321625_322600_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI52557.1\|323042_323792_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-16	25.6
AXI52558.1\|323784_324504_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-11	25.3
AXI52559.1\|324546_325749_+	ABC transporter permease	NA	NA	NA	NA
AXI52560.1\|325822_326710_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI52561.1\|326709_327672_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI52611.1\|328215_329970_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.9e-69	34.0
AXI52562.1\|330046_331669_+	long-chain fatty acid--CoA ligase	Q75ZG1	Hepacivirus	2.5e-27	25.3

DBSCAN-SWA_18

345604 : 350531

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52574.1\|345604_346369_+	AAA family ATPase	A0A059NT77	Lactococcus_phage	6.7e-39	40.0
AXI52575.1\|347267_350531_-	error-prone DNA polymerase	Q8W6C3	Saccharomonospora_phage	1.0e-67	25.7

DBSCAN-SWA_19

361411 : 363097

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52580.1\|361411_363097_-	microcin ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-20	31.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP025808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1132352 : 1241333

107

Rhodobacter_phage(28.26%)

tRNA,transposase,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI50379.1\|1132352_1133186_-	hypothetical protein	Q8W6R4	Burkholderia_virus	2.9e-59	43.3
AXI50380.1\|1133265_1133502_+	hypothetical protein	NA	NA	NA	NA
AXI50381.1\|1133608_1133809_+	hypothetical protein	NA	NA	NA	NA
AXI50382.1\|1133805_1134048_-	hypothetical protein	M4STD1	Rhodobacter_phage	1.9e-08	68.1
AXI50383.1\|1134412_1135153_-	hypothetical protein	M4SRX1	Rhodobacter_phage	2.8e-34	37.1
AXI50384.1\|1135210_1135501_+	hypothetical protein	A0A1B0T6N5	Pelagibaca_phage	1.4e-05	54.2
AXI50385.1\|1135500_1135728_+	hypothetical protein	NA	NA	NA	NA
AXI50386.1\|1135724_1136240_+	hypothetical protein	NA	NA	NA	NA
AXI50387.1\|1136241_1136496_+	hypothetical protein	NA	NA	NA	NA
AXI50388.1\|1136492_1136729_+	hypothetical protein	NA	NA	NA	NA
AXI50389.1\|1136728_1136998_+	hypothetical protein	A0A1B1P711	Rhodovulum_phage	2.0e-14	54.7
AXI50390.1\|1136994_1137879_+	hypothetical protein	R9U496	Rhizobium_phage	4.7e-36	39.2
AXI50391.1\|1137866_1140020_+\|transposase	transposase	M4T586	Rhodobacter_phage	3.0e-145	42.2
AXI50392.1\|1140079_1140823_+	ATP-binding protein	M4SPU5	Rhodobacter_phage	2.9e-71	53.9
AXI50393.1\|1140819_1141431_+	hypothetical protein	A0A1B1P6Z8	Rhodovulum_phage	7.8e-38	44.3
AXI50394.1\|1141427_1141799_+	hypothetical protein	A0A1B0T6G8	Thiobacimonas_phage	8.6e-32	53.8
AXI50395.1\|1141795_1142149_+	hypothetical protein	NA	NA	NA	NA
AXI50396.1\|1142145_1142370_+	hypothetical protein	NA	NA	NA	NA
AXI50397.1\|1142366_1142546_+	hypothetical protein	NA	NA	NA	NA
AXI50398.1\|1142532_1143183_+	hypothetical protein	M4STB6	Rhodobacter_phage	2.1e-81	67.6
AXI52203.1\|1143109_1143589_+	hypothetical protein	NA	NA	NA	NA
AXI50399.1\|1143585_1144038_+	regulatory protein GemA	A0A1B0T6H1	Thiobacimonas_phage	1.1e-44	61.6
AXI50400.1\|1144034_1144289_+	hypothetical protein	NA	NA	NA	NA
AXI50401.1\|1144285_1144657_+	hypothetical protein	M4SNV1	Rhodobacter_phage	8.6e-24	46.8
AXI50402.1\|1144759_1145626_+	N-acetylmuramoyl-L-alanine amidase	A0A1B0T6G1	Thiobacimonas_phage	2.6e-95	60.8
AXI50403.1\|1145644_1145863_+	hypothetical protein	NA	NA	NA	NA
AXI50404.1\|1145869_1146280_+	hypothetical protein	NA	NA	NA	NA
AXI50405.1\|1146279_1146675_+	hypothetical protein	NA	NA	NA	NA
AXI50406.1\|1146674_1146977_+	hypothetical protein	J9SNG3	Pseudomonas_phage	1.0e-06	36.0
AXI50407.1\|1146997_1147291_+	hypothetical protein	A0A1B1P718	Rhodovulum_phage	7.5e-15	47.5
AXI50408.1\|1147292_1147865_+	DUF3486 domain-containing protein	A0A1B0T6K5	Pelagibaca_phage	9.5e-46	53.2
AXI50409.1\|1147857_1148181_+	hypothetical protein	NA	NA	NA	NA
AXI50410.1\|1148497_1148773_+	hypothetical protein	NA	NA	NA	NA
AXI50411.1\|1148769_1150467_+	hypothetical protein	M4SRU6	Rhodobacter_phage	1.2e-226	67.7
AXI50412.1\|1150466_1150715_+	hypothetical protein	NA	NA	NA	NA
AXI50413.1\|1150704_1152348_+	DUF935 domain-containing protein	M4SPR8	Rhodobacter_phage	4.2e-187	62.3
AXI50414.1\|1152289_1153495_+	virion morphogenesis protein	A0A1B0T6H8	Thiobacimonas_phage	2.2e-100	67.1
AXI50415.1\|1153499_1154000_+	phage virion morphogenesis protein	M4ST99	Rhodobacter_phage	1.3e-35	50.0
AXI50416.1\|1153992_1154319_+	hypothetical protein	NA	NA	NA	NA
AXI50417.1\|1154499_1155579_+	hypothetical protein	M4SNT6	Rhodobacter_phage	7.5e-60	41.3
AXI50418.1\|1155578_1156016_+	hypothetical protein	A0A1B0T6E4	Thiobacimonas_phage	1.0e-39	62.1
AXI50419.1\|1156028_1156922_+	hypothetical protein	M4SRT6	Rhodobacter_phage	3.7e-113	64.3
AXI50420.1\|1156934_1157489_+	hypothetical protein	NA	NA	NA	NA
AXI52204.1\|1157569_1157998_+	DUF1320 domain-containing protein	M4SPQ8	Rhodobacter_phage	4.3e-35	52.8
AXI50421.1\|1157997_1158426_+	hypothetical protein	A0A1B0T6E9	Thiobacimonas_phage	6.0e-29	45.4
AXI50422.1\|1158572_1159505_+	hypothetical protein	A0A1B0T6E1	Thiobacimonas_phage	2.1e-95	55.2
AXI50423.1\|1159524_1159854_+	hypothetical protein	NA	NA	NA	NA
AXI50424.1\|1159850_1160207_+	hypothetical protein	NA	NA	NA	NA
AXI50425.1\|1160203_1162975_+	hypothetical protein	M4SPQ3	Rhodobacter_phage	8.4e-23	23.7
AXI50426.1\|1162971_1163394_+	hypothetical protein	A0A1B0T6E0	Thiobacimonas_phage	4.0e-33	57.1
AXI50427.1\|1163390_1163915_+	hypothetical protein	A0A1B0T6D7	Thiobacimonas_phage	2.4e-56	62.6
AXI50428.1\|1163911_1164328_+\|tail	phage tail protein	A0A1B0T6J5	Pelagibaca_phage	6.9e-30	47.7
AXI50429.1\|1164324_1167633_+\|tail	phage tail protein	A0A1B0T6D1	Thiobacimonas_phage	1.4e-274	46.1
AXI50430.1\|1167642_1169577_+	hypothetical protein	NA	NA	NA	NA
AXI50431.1\|1169582_1170359_+	hypothetical protein	NA	NA	NA	NA
AXI50432.1\|1170477_1171047_+	hypothetical protein	NA	NA	NA	NA
AXI50433.1\|1172407_1173397_-	NADPH:quinone reductase	NA	NA	NA	NA
AXI50434.1\|1173467_1173974_-	aspartyl-trna synthetase	NA	NA	NA	NA
AXI50435.1\|1174100_1175087_+	D-glycerate dehydrogenase	A0A1B1IVB5	uncultured_Mediterranean_phage	3.8e-18	25.7
AXI50436.1\|1175168_1176977_+	gamma-glutamyltransferase	NA	NA	NA	NA
AXI50437.1\|1177007_1178420_+	FAD-binding protein	NA	NA	NA	NA
AXI50438.1\|1178626_1181119_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXI50439.1\|1181128_1181896_-	HNH endonuclease	F2Y1P3	Organic_Lake_phycodnavirus	8.3e-05	34.0
AXI50440.1\|1181986_1182769_-	glycoside hydrolase	F0PIJ7	Enterococcus_phage	3.0e-10	24.3
AXI50441.1\|1182773_1183424_-	DUF938 domain-containing protein	NA	NA	NA	NA
AXI50442.1\|1183420_1184506_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXI50443.1\|1184610_1185225_-	glutathione S-transferase	NA	NA	NA	NA
AXI50444.1\|1185312_1186698_-	PepSY domain-containing protein	NA	NA	NA	NA
AXI50445.1\|1186766_1187132_-	hypothetical protein	NA	NA	NA	NA
AXI50446.1\|1187263_1188337_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI50447.1\|1188389_1189310_-	ABC transporter permease	NA	NA	NA	NA
AXI50448.1\|1189309_1190392_-	ABC transporter permease	NA	NA	NA	NA
AXI50449.1\|1190479_1192000_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.9e-17	28.1
AXI50450.1\|1191996_1192968_-	xanthine dehydrogenase accessory protein XdhC	NA	NA	NA	NA
AXI50451.1\|1192957_1195363_-	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	7.7e-206	49.0
AXI50452.1\|1195359_1196778_-	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	2.9e-96	44.5
AXI50453.1\|1197002_1200536_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	1.5e-170	36.9
AXI50454.1\|1200581_1200776_-	SlyX protein	NA	NA	NA	NA
AXI50455.1\|1200934_1202443_+\|tRNA	histidine--tRNA ligase	A0A1V0S921	Catovirus	5.2e-27	25.6
AXI50456.1\|1202442_1203522_+	ATP phosphoribosyltransferase regulatory subunit	A0A2K9L0H9	Tupanvirus	1.8e-05	25.1
AXI50457.1\|1203518_1204208_+	ATP phosphoribosyltransferase catalytic subunit HisG	NA	NA	NA	NA
AXI50458.1\|1204343_1204775_-	DUF1489 domain-containing protein	NA	NA	NA	NA
AXI50459.1\|1204898_1207181_+	ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent	M4QT32	Loktanella_phage	4.0e-289	65.3
AXI50460.1\|1207502_1208552_+	peptidase	NA	NA	NA	NA
AXI52205.1\|1208633_1209086_+\|protease	ATP-dependent Lon protease	NA	NA	NA	NA
AXI50461.1\|1209087_1209339_+	hypothetical protein	NA	NA	NA	NA
AXI50462.1\|1211579_1212416_-	exonuclease	NA	NA	NA	NA
AXI50463.1\|1212631_1214158_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-99	40.4
AXI50464.1\|1215052_1215244_+	type III secretion system translocon protein SseD	NA	NA	NA	NA
AXI50465.1\|1215453_1216896_-	hypothetical protein	NA	NA	NA	NA
AXI50466.1\|1216892_1218245_-	DUF4365 domain-containing protein	NA	NA	NA	NA
AXI50467.1\|1218399_1219731_-	hypothetical protein	NA	NA	NA	NA
AXI50468.1\|1220497_1220830_-	hypothetical protein	NA	NA	NA	NA
AXI50469.1\|1220962_1221301_-	hypothetical protein	NA	NA	NA	NA
AXI50470.1\|1221704_1222427_+	hypothetical protein	NA	NA	NA	NA
AXI50471.1\|1222527_1225089_-	helicase	NA	NA	NA	NA
AXI50472.1\|1225090_1226893_-	hypothetical protein	NA	NA	NA	NA
AXI50473.1\|1226886_1228098_-	hypothetical protein	NA	NA	NA	NA
AXI50474.1\|1228097_1231298_-	exodeoxyribonuclease V subunit beta	A0A172PZX3	Pseudomonas_phage	1.1e-05	31.6
AXI50475.1\|1231294_1233841_-	hypothetical protein	NA	NA	NA	NA
AXI50476.1\|1233992_1235119_-\|transposase	IS3 family transposase	NA	NA	NA	NA
AXI50477.1\|1235403_1236540_-	HNH endonuclease	NA	NA	NA	NA
AXI50478.1\|1236523_1237033_-	hypothetical protein	NA	NA	NA	NA
AXI50479.1\|1237029_1238274_-	nucleotidyltransferase	NA	NA	NA	NA
AXI50480.1\|1238631_1238991_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXI50481.1\|1238987_1239341_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	7.0e-15	37.0
AXI52206.1\|1239833_1241333_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.1e-16	31.0

DBSCAN-SWA_2

1490494 : 1540236

Bacillus_phage(27.27%)

holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI50707.1\|1490494_1491319_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AXI50708.1\|1491873_1493169_+	adenylosuccinate synthase	A0A291AUF9	Pandoravirus	1.5e-51	30.5
AXI50709.1\|1493223_1493454_+	DUF2842 domain-containing protein	NA	NA	NA	NA
AXI50710.1\|1493559_1495794_-	hypothetical protein	NA	NA	NA	NA
AXI50711.1\|1495931_1496624_+	thiamine diphosphokinase	NA	NA	NA	NA
AXI50712.1\|1496556_1497534_-	EamA/RhaT family transporter	NA	NA	NA	NA
AXI50713.1\|1497591_1499007_-	diguanylate cyclase response regulator	A0A127AWB9	Bacillus_phage	1.6e-14	36.1
AXI50714.1\|1499096_1499390_+	DUF3572 domain-containing protein	NA	NA	NA	NA
AXI50715.1\|1499380_1500100_+	HAD family hydrolase	NA	NA	NA	NA
AXI50716.1\|1500218_1500815_+	heme NO-binding protein	NA	NA	NA	NA
AXI50717.1\|1500859_1501861_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.7e-11	28.1
AXI50718.1\|1502091_1503840_+	alpha-amylase	NA	NA	NA	NA
AXI50719.1\|1503864_1505085_-	glycosyl transferase	NA	NA	NA	NA
AXI50720.1\|1505098_1505884_-	mannosyl-3-phosphoglycerate phosphatase	NA	NA	NA	NA
AXI50721.1\|1506245_1506836_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXI50722.1\|1506906_1508496_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI50723.1\|1508588_1509698_+	aminopeptidase P family protein	NA	NA	NA	NA
AXI50724.1\|1509691_1510699_+	peptide ABC transporter permease	NA	NA	NA	NA
AXI50725.1\|1510700_1511606_+	dipeptide ABC transporter permease DppC	NA	NA	NA	NA
AXI50726.1\|1511609_1512587_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-17	29.6
AXI50727.1\|1512583_1513555_+	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-17	31.8
AXI50728.1\|1513592_1514480_-	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA
AXI50729.1\|1514652_1515576_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI50730.1\|1515660_1516494_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
AXI50731.1\|1516502_1517531_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-23	32.2
AXI50732.1\|1517600_1518542_+	EamA family transporter	NA	NA	NA	NA
AXI50733.1\|1518699_1519527_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	NA	NA	NA
AXI50734.1\|1519523_1520369_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
AXI50735.1\|1520444_1521962_-	catalase	A0A2K9L572	Tupanvirus	8.9e-83	37.9
AXI50736.1\|1522066_1522834_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	9.8e-14	29.0
AXI50737.1\|1522830_1523883_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	3.2e-07	23.1
AXI50738.1\|1523879_1524896_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI50739.1\|1525620_1526568_-	KR domain-containing protein	NA	NA	NA	NA
AXI50740.1\|1526735_1527632_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXI50741.1\|1527687_1527972_-	hypothetical protein	NA	NA	NA	NA
AXI50742.1\|1528423_1530163_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.7e-45	28.9
AXI50743.1\|1530262_1531549_-	homoserine dehydrogenase	NA	NA	NA	NA
AXI50744.1\|1531655_1531952_-	hypothetical protein	NA	NA	NA	NA
AXI50745.1\|1532031_1532619_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXI50746.1\|1532667_1533348_-	nitroreductase	NA	NA	NA	NA
AXI50747.1\|1533441_1534815_-	L-serine ammonia-lyase	NA	NA	NA	NA
AXI50748.1\|1534814_1535501_-	glutathione S-transferase family protein	NA	NA	NA	NA
AXI50749.1\|1535731_1536520_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
AXI50750.1\|1536541_1538008_+	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	4.0e-32	25.1
AXI50751.1\|1538239_1539325_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AXI50752.1\|1539324_1540236_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_3

1653308 : 1699093

Paracoccus_phage(17.65%)

tail,head,capsid,tRNA,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI50858.1\|1653308_1653968_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.6e-60	61.1
AXI50859.1\|1654102_1655368_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.6e-130	56.1
AXI52226.1\|1655512_1655872_+	RidA family protein	NA	NA	NA	NA
AXI50860.1\|1655955_1656339_+	NADH:ubiquinone oxidoreductase subunit NDUFA12	NA	NA	NA	NA
AXI52227.1\|1656429_1656783_+	DUF2155 domain-containing protein	NA	NA	NA	NA
AXI50861.1\|1656746_1657382_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXI50862.1\|1657374_1658727_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXI50863.1\|1658737_1659238_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AXI50864.1\|1659487_1660243_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.2e-08	28.8
AXI50865.1\|1660304_1661069_-	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	9.8e-14	27.5
AXI50866.1\|1661084_1662293_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI50867.1\|1662296_1663328_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXI50868.1\|1663416_1664781_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXI50869.1\|1665012_1666308_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXI50870.1\|1666415_1666799_+	response regulator	W8CYM9	Bacillus_phage	1.6e-12	31.3
AXI50871.1\|1666795_1667068_+	hypothetical protein	NA	NA	NA	NA
AXI50872.1\|1667067_1669761_+	sodium:solute symporter	W8CYF6	Bacillus_phage	1.1e-22	32.8
AXI50873.1\|1670038_1670461_-	TIGR01244 family phosphatase	NA	NA	NA	NA
AXI50874.1\|1670469_1670901_-	hypothetical protein	NA	NA	NA	NA
AXI50875.1\|1670902_1671334_-	hypothetical protein	NA	NA	NA	NA
AXI50876.1\|1671496_1671736_-	hypothetical protein	NA	NA	NA	NA
AXI50877.1\|1671843_1672131_+	DUF2312 domain-containing protein	A0A1X9HX62	Ruegeria_phage	1.2e-28	83.5
AXI50878.1\|1672344_1673676_+	trigger factor	NA	NA	NA	NA
AXI50879.1\|1673813_1674524_+	FkbM family methyltransferase	NA	NA	NA	NA
AXI50880.1\|1674573_1675023_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
AXI50881.1\|1675241_1675862_-	50S ribosomal protein L9	NA	NA	NA	NA
AXI50882.1\|1675873_1676101_-	30S ribosomal protein S18	NA	NA	NA	NA
AXI50883.1\|1676130_1676493_-	30S ribosomal protein S6	NA	NA	NA	NA
AXI50884.1\|1676841_1677279_+	hypothetical protein	NA	NA	NA	NA
AXI50885.1\|1677426_1678002_+	polyisoprenoid-binding protein	NA	NA	NA	NA
AXI50886.1\|1678076_1679288_-	cytochrome	NA	NA	NA	NA
AXI50887.1\|1679435_1680368_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA
AXI50888.1\|1680392_1681130_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
AXI50889.1\|1681331_1681565_+	acyl carrier protein	A0A2C9CY51	Yersinia_phage	8.7e-06	47.5
AXI50890.1\|1681744_1682278_+	N-acetyltransferase	NA	NA	NA	NA
AXI50891.1\|1682365_1683625_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA
AXI50892.1\|1683624_1684809_+	endolytic transglycosylase MltG	NA	NA	NA	NA
AXI50893.1\|1684932_1685376_+	hypothetical protein	NA	NA	NA	NA
AXI52228.1\|1685428_1686655_+	ATP-binding protein	A0A1V0DY66	Dinoroseobacter_phage	4.2e-75	42.8
AXI50894.1\|1686803_1687979_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	1.8e-59	37.0
AXI50895.1\|1687971_1688196_+	hypothetical protein	NA	NA	NA	NA
AXI50896.1\|1688221_1688836_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.1e-34	54.7
AXI50897.1\|1688840_1690016_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	6.9e-67	37.4
AXI50898.1\|1690172_1690769_+	hypothetical protein	NA	NA	NA	NA
AXI50899.1\|1690765_1691104_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
AXI50900.1\|1691100_1691511_+	DUF3168 domain-containing protein	NA	NA	NA	NA
AXI50901.1\|1691545_1691986_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
AXI50902.1\|1691988_1692303_+	gene transfer agent family protein	NA	NA	NA	NA
AXI50903.1\|1692344_1692533_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
AXI50904.1\|1692532_1693192_+\|tail	phage tail protein	D6PFD6	uncultured_phage	5.5e-13	43.2
AXI50905.1\|1693204_1693837_+	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	7.0e-58	50.5
AXI50906.1\|1693833_1694724_+	DUF2163 domain-containing protein	A0A0K0PVK1	Roseobacter_phage	9.5e-53	39.5
AXI50907.1\|1694720_1695167_+	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	5.7e-30	50.4
AXI50908.1\|1695166_1699093_+	host specificity protein	A0A0B5A7K5	Paracoccus_phage	1.8e-220	38.0

DBSCAN-SWA_4

2134908 : 2146869

Hokovirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI51301.1\|2134908_2137005_-	ATPase	A0A1V0SGX0	Hokovirus	2.9e-23	31.2
AXI51302.1\|2137239_2138616_-	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXI51303.1\|2138726_2139308_-	DUF1190 domain-containing protein	M1F298	Cronobacter_phage	1.5e-09	28.8
AXI51304.1\|2139351_2140587_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	1.0e-76	40.0
AXI51305.1\|2140816_2141491_+	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
AXI51306.1\|2141562_2142159_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXI51307.1\|2142392_2143094_+	7-cyano-7-deazaguanine synthase QueC	A0A2P1JXV3	Rhodococcus_phage	9.8e-53	49.6
AXI51308.1\|2143093_2143447_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	3.0e-10	38.6
AXI51309.1\|2143443_2144154_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	2.9e-36	38.2
AXI51310.1\|2144172_2144634_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-25	53.3
AXI51311.1\|2145243_2146869_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	4.1e-25	27.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP025810

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 17078

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52615.1\|0_1146_+	replication protein	NA	NA	NA	NA
AXI52616.1\|1310_1532_+	hypothetical protein	NA	NA	NA	NA
AXI52617.1\|1540_1834_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AXI52618.1\|1847_2483_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA
AXI52619.1\|2579_3329_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXI52620.1\|3399_5085_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AXI52621.1\|5276_6908_+	hypothetical protein	NA	NA	NA	NA
AXI52622.1\|6964_11827_+	cytochrome	NA	NA	NA	NA
AXI52623.1\|12008_13013_+	hypothetical protein	NA	NA	NA	NA
AXI52624.1\|13177_14458_+	DUF560 domain-containing protein	NA	NA	NA	NA
AXI52625.1\|14678_16166_+	aldehyde dehydrogenase	NA	NA	NA	NA
AXI52626.1\|16196_17078_+	NAD(P)-dependent oxidoreductase	M1T2E7	Synechococcus_phage	1.1e-05	26.7

DBSCAN-SWA_2

20123 : 20795

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52629.1\|20123_20795_+	RNA polymerase subunit sigma-70	G8CLC7	Synechococcus_phage	4.6e-07	26.4

DBSCAN-SWA_3

59098 : 62365

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52674.1\|59098_62365_-	PAS domain-containing protein	A0A1V0SGX0	Hokovirus	3.8e-22	32.2

DBSCAN-SWA_4

72049 : 73033

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52681.1\|72049_73033_-	response regulator	W8CYM9	Bacillus_phage	2.0e-11	40.7

DBSCAN-SWA_5

80607 : 81066

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52687.1\|80607_81066_+	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	9.7e-09	31.1

DBSCAN-SWA_6

85436 : 90616

Trichoplusia_ni_ascovirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52692.1\|85436_86435_-	NADPH:quinone oxidoreductase family protein	A0A2K9V7Y5	Bandra_megavirus	7.5e-06	25.6
AXI52693.1\|86559_87735_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXI52694.1\|87772_88855_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXI52695.1\|88858_89680_+	KR domain-containing protein	Q06VL0	Trichoplusia_ni_ascovirus	8.6e-16	31.3
AXI52696.1\|89689_90616_+	KR domain-containing protein	Q06VL0	Trichoplusia_ni_ascovirus	2.0e-05	25.7

DBSCAN-SWA_7

98417 : 99883

Brazilian_cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52704.1\|98417_99179_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.8e-10	29.4
AXI52705.1\|99178_99883_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	7.7e-05	20.9

DBSCAN-SWA_8

106269 : 107037

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52712.1\|106269_107037_-	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.1e-15	29.6

DBSCAN-SWA_9

110475 : 112167

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52715.1\|110475_112167_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	4.8e-13	22.5

DBSCAN-SWA_10

115600 : 118348

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52719.1\|115600_118348_+	aldehyde oxidase	A0A0P0I429	Acinetobacter_phage	3.4e-56	27.5

DBSCAN-SWA_11

126703 : 128174

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52728.1\|126703_127480_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.6e-14	25.3
AXI52729.1\|127472_128174_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.6e-16	29.0

DBSCAN-SWA_12

131659 : 132652

unidentified_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52732.1\|131659_132652_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	1.6e-24	27.7

DBSCAN-SWA_13

138740 : 143603

Yellowstone_lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52738.1\|138740_139586_+	glycosyl transferase	A0A0P0YNC5	Yellowstone_lake_phycodnavirus	6.2e-09	37.9
AXI52739.1\|139608_140349_+	hypothetical protein	NA	NA	NA	NA
AXI52740.1\|140345_141104_-	glycosyl transferase family 25	NA	NA	NA	NA
AXI52741.1\|141321_141486_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
AXI52742.1\|141482_143603_-	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.1e-25	23.4

DBSCAN-SWA_14

156188 : 156935

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52754.1\|156188_156935_-	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	8.4e-18	30.2

DBSCAN-SWA_15

166997 : 171980

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52766.1\|166997_168650_-	PAS domain-containing sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.9e-22	24.3
AXI52767.1\|168785_171980_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	3.3e-23	29.9

DBSCAN-SWA_16

175754 : 176516

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52771.1\|175754_176516_-	3-hydroxyacyl-CoA dehydrogenase	F2NZ40	Diadromus_pulchellus_ascovirus	1.7e-05	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP025811

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 47737

uncultured_virus(22.22%)

integrase,transposase

attL 17342:17360|attR 38368:38386

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52781.1\|1207_2263_+	replication initiator RepC	NA	NA	NA	NA
AXI52782.1\|2475_3678_-	Fic family protein	NA	NA	NA	NA
AXI52898.1\|3957_4443_+	hypothetical protein	NA	NA	NA	NA
AXI52783.1\|4483_5425_+	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.5e-43	36.2
AXI52784.1\|5448_5658_+	hypothetical protein	NA	NA	NA	NA
AXI52785.1\|5888_6497_-	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	1.8e-18	34.4
AXI52786.1\|6591_9495_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.7e-180	37.7
AXI52787.1\|9526_10558_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	1.6e-06	25.7
AXI52899.1\|10977_11367_+	DUF3768 domain-containing protein	NA	NA	NA	NA
AXI52788.1\|11524_13507_+	chromosome partitioning protein ParB	A0A0F7L836	uncultured_marine_virus	3.9e-06	34.0
AXI52789.1\|13583_14177_+	regulator	NA	NA	NA	NA
AXI52790.1\|14176_14830_+	hypothetical protein	NA	NA	NA	NA
AXI52791.1\|14956_15283_+	type II toxin-antitoxin system PrlF family antitoxin	NA	NA	NA	NA
AXI52792.1\|15279_15798_+	toxin	NA	NA	NA	NA
AXI52793.1\|16056_17280_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.3e-39	43.2
17342:17360	attL	NA	NA	NA	NA
AXI52900.1\|17445_18816_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXI52794.1\|18808_19321_-	transporter	NA	NA	NA	NA
AXI52795.1\|19570_20038_-	metal-binding protein	NA	NA	NA	NA
AXI52796.1\|20140_20650_-	signal peptidase II	NA	NA	NA	NA
AXI52797.1\|20646_21501_-	cation transporter	NA	NA	NA	NA
AXI52798.1\|21557_21908_+	transcriptional regulator	NA	NA	NA	NA
AXI52799.1\|21959_22427_+	metal-binding protein	NA	NA	NA	NA
AXI52800.1\|22574_23012_+	hypothetical protein	NA	NA	NA	NA
AXI52801.1\|23864_28139_+	SAM-dependent methyltransferase	A0A1X9HW54	Ruegeria_phage	9.4e-13	29.5
AXI52802.1\|28153_28402_+	hypothetical protein	NA	NA	NA	NA
AXI52803.1\|28583_29312_+	chromosome partitioning protein ParB	NA	NA	NA	NA
AXI52804.1\|29809_30697_+	radical SAM protein	NA	NA	NA	NA
AXI52805.1\|30693_30912_+	hypothetical protein	NA	NA	NA	NA
AXI52806.1\|30899_31931_-	hypothetical protein	NA	NA	NA	NA
AXI52807.1\|32149_33796_-\|transposase	IS1634 family transposase	NA	NA	NA	NA
AXI52901.1\|34126_34426_-	transcriptional regulator	NA	NA	NA	NA
AXI52808.1\|34560_35289_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXI52809.1\|35430_36063_+\|integrase	integrase	NA	NA	NA	NA
AXI52810.1\|36213_36897_+	YecA family protein	NA	NA	NA	NA
AXI52811.1\|37027_38203_-	hypothetical protein	NA	NA	NA	NA
AXI52812.1\|39047_39977_+	hypothetical protein	A0A291L9X7	Bordetella_phage	4.8e-07	33.9
38368:38386	attR	NA	NA	NA	NA
AXI52813.1\|40012_40315_+	hypothetical protein	NA	NA	NA	NA
AXI52814.1\|40516_40723_+	hypothetical protein	NA	NA	NA	NA
AXI52815.1\|41285_41879_+\|transposase	transposase	NA	NA	NA	NA
AXI52816.1\|41865_44199_+	endonuclease	NA	NA	NA	NA
AXI52817.1\|44207_46190_+	type VI secretion protein	NA	NA	NA	NA
AXI52818.1\|46513_47737_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.2e-39	43.2

DBSCAN-SWA_2

55059 : 57414

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52830.1\|55059_57414_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	9.4e-116	40.5

DBSCAN-SWA_3

63306 : 69611

Stx2-converting_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52834.1\|63306_63909_-	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.1e-17	32.3
AXI52835.1\|63905_65546_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-91	39.6
AXI52836.1\|65605_65956_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	1.9e-28	55.1
AXI52837.1\|65952_66348_-	IS66 family insertion sequence hypothetical protein	Q76S41	Shigella_phage	1.1e-05	44.8
AXI52838.1\|66496_66955_-	signal peptidase II	NA	NA	NA	NA
AXI52839.1\|66983_67766_-	zinc transporter ZupT	NA	NA	NA	NA
AXI52840.1\|67778_68234_-	hypothetical protein	NA	NA	NA	NA
AXI52841.1\|68237_69611_-	M23 family peptidase	G9BW84	Planktothrix_phage	9.0e-18	43.9

DBSCAN-SWA_4

86777 : 90719

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52857.1\|86777_87650_-	DUF305 domain-containing protein	A0A1V0SJW0	Klosneuvirus	5.6e-05	29.4
AXI52858.1\|87772_88192_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
AXI52859.1\|88211_90719_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.7e-99	34.4

DBSCAN-SWA_5

99345 : 110517

Leptospira_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52868.1\|99345_102495_-	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.0e-48	21.3
AXI52869.1\|102491_103928_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXI52870.1\|103924_104323_-	hypothetical protein	NA	NA	NA	NA
AXI52871.1\|104432_104762_-	hypothetical protein	NA	NA	NA	NA
AXI52872.1\|104855_107183_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.8e-85	36.9
AXI52912.1\|107619_108132_+	hypothetical protein	NA	NA	NA	NA
AXI52873.1\|108251_108479_-	hypothetical protein	NA	NA	NA	NA
AXI52874.1\|108646_108904_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXI52875.1\|109028_109280_-	hypothetical protein	NA	NA	NA	NA
AXI52876.1\|109490_109859_+	hypothetical protein	NA	NA	NA	NA
AXI52877.1\|109902_110517_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	6.6e-21	55.9

DBSCAN-SWA_6

113752 : 114841

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52914.1\|113752_114841_+	lytic transglycosylase	A0A1P8CWQ1	Bacillus_phage	3.8e-27	57.7

DBSCAN-SWA_7

125854 : 127078

uncultured_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52890.1\|125854_127078_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.0e-40	44.3

DBSCAN-SWA_8

132234 : 137114

Leptospira_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52894.1\|132234_133321_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.3e-47	38.2
AXI52895.1\|133546_134755_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.3e-33	31.0
AXI52896.1\|136205_137114_+	recombinase family protein	A0A0C4UR34	Shigella_phage	4.5e-34	56.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. CP025812

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 88722

Salmonella_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52917.1\|0_972_+	plasmid partitioning protein RepB	NA	NA	NA	NA
AXI52918.1\|1142_2195_+	replication protein C	NA	NA	NA	NA
AXI52996.1\|2851_4138_+	ATP-binding protein	NA	NA	NA	NA
AXI52919.1\|4301_5030_-	hypothetical protein	NA	NA	NA	NA
AXI52997.1\|5388_5799_-	hypothetical protein	NA	NA	NA	NA
AXI52920.1\|6139_7456_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXI52921.1\|7445_7778_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXI52922.1\|8337_8676_+	DUF736 domain-containing protein	NA	NA	NA	NA
AXI52923.1\|11042_11765_+	hypothetical protein	NA	NA	NA	NA
AXI52924.1\|11757_13686_+	endonuclease	NA	NA	NA	NA
AXI52925.1\|13701_15612_+	type VI secretion protein	NA	NA	NA	NA
AXI52926.1\|16683_18210_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-99	40.4
AXI52927.1\|19001_19706_+	hypothetical protein	M9Q1K0	Clostridium_phage	5.3e-06	27.3
AXI52928.1\|20245_23149_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.7e-180	37.7
AXI52929.1\|23243_23852_+	DNA resolvase	A0A1S5Y2X8	uncultured_archaeal_virus	8.0e-19	34.4
AXI52930.1\|24370_24697_-	hypothetical protein	NA	NA	NA	NA
AXI52931.1\|26134_26545_-	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	4.4e-13	37.6
AXI52932.1\|26483_26915_-	IS66 family insertion sequence hypothetical protein	B6DZU5	Stx2-converting_phage	1.5e-06	27.9
AXI52933.1\|27524_28385_+	hypothetical protein	NA	NA	NA	NA
AXI52934.1\|28454_29279_+\|transposase	IS5 family transposase	NA	NA	NA	NA
AXI52935.1\|29295_30579_+	hypothetical protein	NA	NA	NA	NA
AXI52936.1\|30708_31659_-	type II secretion system protein E	NA	NA	NA	NA
AXI52937.1\|31685_33113_-	type IV secretion system protein B10	NA	NA	NA	NA
AXI52938.1\|33115_33847_-	conjugal transfer protein TrbG	NA	NA	NA	NA
AXI52939.1\|33851_34523_-	type IV secretion system protein	NA	NA	NA	NA
AXI52940.1\|34542_35556_-	conjugal transfer protein TrbL	NA	NA	NA	NA
AXI52941.1\|35556_35856_-	hypothetical protein	NA	NA	NA	NA
AXI52942.1\|35975_36743_-	hypothetical protein	NA	NA	NA	NA
AXI52943.1\|36739_37852_-	lytic transglycosylase	A0A0H3V0Q1	Geobacillus_virus	4.1e-29	57.5
AXI52944.1\|37848_38055_-	hypothetical protein	NA	NA	NA	NA
AXI52945.1\|38051_40427_-	type IV secretion system protein B4	NA	NA	NA	NA
AXI52946.1\|40416_40695_-	type IV secretion system protein VirB3	NA	NA	NA	NA
AXI52947.1\|40699_40981_-	hypothetical protein	NA	NA	NA	NA
AXI52998.1\|40995_41511_-	membrane-bound lytic murein transglycosylase MltF	A0A0S2SXL7	Bacillus_phage	1.2e-18	51.0
AXI52948.1\|41632_41947_-	hypothetical protein	NA	NA	NA	NA
AXI52949.1\|42079_42658_+	hypothetical protein	NA	NA	NA	NA
AXI52950.1\|42675_43128_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXI52999.1\|43529_44273_+	DUF3800 domain-containing protein	A5X9G9	Aeromonas_virus	1.8e-49	42.7
AXI53000.1\|44359_44488_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
AXI52951.1\|44484_44817_+	type II toxin-antitoxin system HicB family antitoxin	R4JJS9	Burkholderia_phage	6.1e-29	53.2
AXI52952.1\|44920_45112_-	hypothetical protein	NA	NA	NA	NA
AXI52953.1\|45394_46669_-	hypothetical protein	NA	NA	NA	NA
AXI52954.1\|46956_47277_-	transcriptional regulator	NA	NA	NA	NA
AXI52955.1\|47359_48694_+	aspartate aminotransferase family protein	NA	NA	NA	NA
AXI52956.1\|48852_50205_+	hypothetical protein	NA	NA	NA	NA
AXI52957.1\|50385_50658_-	hypothetical protein	NA	NA	NA	NA
AXI52958.1\|51416_51977_-	recombinase family protein	A0A1S6L009	Salmonella_phage	1.3e-44	54.0
AXI52959.1\|52111_55087_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.8e-204	40.4
AXI52960.1\|55496_55949_-	metal-binding protein	NA	NA	NA	NA
AXI52961.1\|55969_56965_-	hypothetical protein	A0A7K9	Microcystis_virus	1.7e-13	43.5
AXI52962.1\|57143_57572_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXI52963.1\|57627_58242_+	cation transporter	NA	NA	NA	NA
AXI52964.1\|58437_59346_+	cation transporter	NA	NA	NA	NA
AXI52965.1\|59486_59672_+	hypothetical protein	NA	NA	NA	NA
AXI52966.1\|59745_60336_+	L,D-transpeptidase	NA	NA	NA	NA
AXI52967.1\|60419_61001_+	L,D-transpeptidase	NA	NA	NA	NA
AXI52968.1\|61217_62567_+	multidrug resistance transporter	NA	NA	NA	NA
AXI52969.1\|62790_65745_-\|transposase	DDE transposase	A0A1B0V7H9	Salmonella_phage	4.0e-188	38.6
AXI52970.1\|65885_66455_+	recombinase family protein	A0A219Y912	Aeromonas_phage	1.1e-33	45.6
AXI52971.1\|66677_69815_-	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	1.2e-62	22.8
AXI53001.1\|69826_71182_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXI52972.1\|71396_71756_-	hypothetical protein	NA	NA	NA	NA
AXI52973.1\|72802_73075_-	metal resistance protein	NA	NA	NA	NA
AXI52974.1\|73598_74288_+	hypothetical protein	NA	NA	NA	NA
AXI52975.1\|74307_74943_+	transmembrane anchor protein	NA	NA	NA	NA
AXI52976.1\|76807_77161_+	hypothetical protein	NA	NA	NA	NA
AXI52977.1\|77333_77777_+	hypothetical protein	NA	NA	NA	NA
AXI52978.1\|79511_81515_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-119	40.6
AXI52979.1\|81819_82401_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	6.9e-28	40.1
AXI52980.1\|82551_85527_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.8e-204	40.4
AXI52981.1\|85661_86222_+	recombinase family protein	A0A1S6L009	Salmonella_phage	1.3e-44	54.0
AXI53002.1\|86445_86805_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXI52982.1\|86801_87155_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXI52983.1\|87210_88722_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.4e-96	39.7

DBSCAN-SWA_2

94925 : 111183

uncultured_Mediterranean_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI52986.1\|94925_98879_-	hypothetical protein	A0A1B1IUC6	uncultured_Mediterranean_phage	6.4e-40	24.0
AXI52987.1\|98875_101851_-	hypothetical protein	A0A1B1IUI1	uncultured_Mediterranean_phage	1.6e-80	28.4
AXI52988.1\|102127_104308_+	chromosome partitioning protein ParB	G8DH78	Emiliania_huxleyi_virus	1.8e-28	32.2
AXI52989.1\|104426_104807_+	DUF3768 domain-containing protein	NA	NA	NA	NA
AXI52990.1\|104925_105222_+	hypothetical protein	NA	NA	NA	NA
AXI52991.1\|105303_109695_+	methylase	A0A076FMQ0	Aureococcus_anophage	1.8e-19	22.9
AXI52992.1\|109959_111183_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.3e-39	43.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. CP025813

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2378

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53003.1\|0_960_+	plasmid partitioning protein RepB	NA	NA	NA	NA
AXI53004.1\|1199_2378_+	replication protein C	L7TKN6	Rhizobium_phage	1.8e-06	45.7

DBSCAN-SWA_2

6030 : 53583

Pseudomonas_phage(14.29%)

integrase,transposase

attL 28480:28512|attR 31811:31843

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53006.1\|6030_7443_+	hypothetical protein	A0A1W6JNS5	Morganella_phage	1.2e-49	31.4
AXI53007.1\|7452_7740_-	transcriptional regulator	NA	NA	NA	NA
AXI53008.1\|8159_8564_+	single-stranded DNA-binding protein	C5IHK5	Burkholderia_virus	2.5e-16	40.5
AXI53009.1\|8618_9215_-	hypothetical protein	NA	NA	NA	NA
AXI53010.1\|9254_10160_+	hypothetical protein	NA	NA	NA	NA
AXI53011.1\|10297_11497_+	DUF932 domain-containing protein	A0A1V0DX75	Synechococcus_virus	1.5e-69	41.7
AXI53012.1\|11623_12064_+	DNA repair protein	NA	NA	NA	NA
AXI53013.1\|12173_12692_+	DNA repair protein RadC	NA	NA	NA	NA
AXI53014.1\|12794_13286_+	hypothetical protein	NA	NA	NA	NA
AXI53015.1\|13518_15606_-\|integrase	integrase	NA	NA	NA	NA
AXI53079.1\|15602_16712_-\|transposase	transposase	A0A0F6SJK8	Mycobacterium_phage	5.8e-07	29.4
AXI53016.1\|16847_17069_+	hypothetical protein	U5J9H1	Bacillus_phage	4.2e-10	50.0
AXI53017.1\|17070_17268_+	hypothetical protein	NA	NA	NA	NA
AXI53018.1\|17335_17755_+	hypothetical protein	NA	NA	NA	NA
AXI53019.1\|17747_18392_+	antitoxin of toxin-antitoxin stability system	A0A2I6PI07	Pseudomonas_phage	3.1e-29	36.2
AXI53020.1\|18450_18852_+	DUF2384 domain-containing protein	NA	NA	NA	NA
AXI53021.1\|18848_19550_+	RES domain-containing protein	NA	NA	NA	NA
AXI53022.1\|20075_20372_-	hypothetical protein	NA	NA	NA	NA
AXI53023.1\|20547_24930_+	methylase	A0A076FMQ0	Aureococcus_anophage	5.4e-16	24.5
AXI53024.1\|24933_25965_+	DNA primase	K4NWL6	Pseudomonas_phage	6.8e-10	27.9
AXI53025.1\|26337_27270_+	DUF2493 domain-containing protein	NA	NA	NA	NA
AXI53026.1\|27355_27613_+	WGR domain-containing protein	NA	NA	NA	NA
AXI53027.1\|27659_27890_+	hypothetical protein	NA	NA	NA	NA
AXI53028.1\|27994_28423_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
28480:28512	attL	NA	NA	NA	NA
AXI53029.1\|28569_29559_-\|integrase	integrase	A0A2K9VH72	Gordonia_phage	3.6e-08	29.3
AXI53030.1\|29555_30470_-\|integrase	integrase	NA	NA	NA	NA
AXI53031.1\|30463_31693_-\|integrase	integrase	A7XX23	Thermus_virus	3.4e-08	26.7
AXI53032.1\|31841_32165_+	IS66 family insertion sequence hypothetical protein	S5VXZ8	Leptospira_phage	3.3e-11	37.6
31811:31843	attR	NA	NA	NA	NA
AXI53033.1\|32219_34157_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-91	40.0
AXI53034.1\|34153_34507_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
AXI53035.1\|35775_36540_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	6.1e-40	40.4
AXI53080.1\|36536_38036_-\|transposase	IS21 family transposase	NA	NA	NA	NA
AXI53036.1\|38080_38461_-	hypothetical protein	NA	NA	NA	NA
AXI53081.1\|38551_38905_-	hypothetical protein	NA	NA	NA	NA
AXI53037.1\|39108_40065_-	cation transporter	NA	NA	NA	NA
AXI53082.1\|40054_40810_-	transglutaminase family protein	NA	NA	NA	NA
AXI53038.1\|40905_41484_-	cation transporter	NA	NA	NA	NA
AXI53083.1\|41587_42016_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXI53084.1\|42223_42790_+	SCO family protein	NA	NA	NA	NA
AXI53039.1\|42958_44308_+	nodulation protein T precursor	NA	NA	NA	NA
AXI53040.1\|44734_45094_+	hypothetical protein	NA	NA	NA	NA
AXI53041.1\|45293_46664_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXI53042.1\|46675_49801_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	3.2e-63	22.9
AXI53043.1\|50286_50439_-	Hin recombinase	NA	NA	NA	NA
AXI53044.1\|51799_52135_-	cytochrome c	NA	NA	NA	NA
AXI53045.1\|52224_53583_-\|transposase	ISKra4-like element ISSusp4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

65917 : 66637

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53055.1\|65917_66637_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.0e-25	35.0

DBSCAN-SWA_4

72616 : 75412

Streptococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53058.1\|72616_73327_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.0e-29	36.7
AXI53059.1\|74188_75412_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	8.3e-39	43.2

DBSCAN-SWA_5

80512 : 85613

Aureococcus_anophage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53064.1\|80512_83812_+	helicase	A0A076FHE1	Aureococcus_anophage	2.2e-14	22.2
AXI53065.1\|84086_85613_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-99	40.4

DBSCAN-SWA_6

98997 : 99876

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXI53076.1\|98997_99876_+	recombinase family protein	A0A0C4UR34	Shigella_phage	4.9e-33	55.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage