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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022909 Staphylococcus aureus strain 545 plasmid pPS00078.1A.1, complete sequence 0 crisprs csa3 0 0 0 0
CP022908 Staphylococcus aureus strain 545 chromosome, complete genome 12 crisprs cas3,DEDDh,DinG,csa3,WYL 11 6 11 0

Results visualization

1. CP022908
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_1 46225-46335 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_2 417390-417490 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_3 657916-658008 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_4 816307-816387 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_5 821705-821790 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_6 866309-866390 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_7 931098-931380 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_8 1195557-1195743 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_9 1900760-1900986 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_10 2106229-2106307 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_11 2299712-2299792 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022908_12 2423808-2424001 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 2891143-2891171 0 1.0
CP022908_6 6.1|866333|34|CP022908|CRISPRCasFinder 866333-866366 34 CP022908.1 1406528-1406561 0 1.0
CP022908_6 6.1|866333|34|CP022908|CRISPRCasFinder 866333-866366 34 CP022908.1 1494999-1495032 0 1.0
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 378740-378776 0 1.0
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 821763-821799 0 1.0
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1051146-1051182 0 1.0
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1406487-1406523 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 152877-152913 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 656954-656990 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 774329-774365 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 775299-775335 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 821819-821855 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 1406545-1406581 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 1494979-1495015 0 1.0
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 2107701-2107737 0 1.0
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 378857-378885 1 0.966
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 378912-378940 1 0.966
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 1900723-1900751 1 0.966
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 CP022908.1 784727-784752 1 0.962
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 CP022908.1 1195727-1195752 1 0.962
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 CP022908.1 2891111-2891136 1 0.962
CP022908_7 7.1|931128|26|CP022908|CRT 931128-931153 26 CP022908.1 931072-931097 1 0.962
CP022908_7 7.3|931242|26|CP022908|CRT 931242-931267 26 CP022908.1 821791-821816 1 0.962
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 1900720-1900756 1 0.973
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1495037-1495073 1 0.973
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1722295-1722331 1 0.973
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 2706745-2706781 1 0.973
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 1077280-1077316 1 0.973
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 2591872-2591908 1 0.973
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 CP022908.1 821771-821803 1 0.97
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 CP022908.1 1406483-1406515 1 0.97
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 CP022908.1 1722303-1722335 1 0.97
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 CP022908.1 2706753-2706785 1 0.97
CP022908_12 12.2|2423887|36|CP022908|CRT 2423887-2423922 36 CP022908.1 1900716-1900751 1 0.972
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 866375-866403 2 0.931
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 950767-950795 2 0.931
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 1722242-1722270 2 0.931
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 2116996-2117024 2 0.931
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 CP022908.1 2617158-2617186 2 0.931
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 CP022908.1 784783-784808 2 0.923
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 CP022908.1 931072-931097 2 0.923
CP022908_7 7.1|931128|26|CP022908|CRT 931128-931153 26 CP022908.1 784727-784752 2 0.923
CP022908_7 7.1|931128|26|CP022908|CRT 931128-931153 26 CP022908.1 1195727-1195752 2 0.923
CP022908_7 7.1|931128|26|CP022908|CRT 931128-931153 26 CP022908.1 2891111-2891136 2 0.923
CP022908_7 7.3|931242|26|CP022908|CRT 931242-931267 26 CP022908.1 378723-378748 2 0.923
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 866370-866406 2 0.946
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 1722237-1722273 2 0.946
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 2116991-2117027 2 0.946
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 2617155-2617191 2 0.946
CP022908_8 8.1|1195576|37|CP022908|CRT 1195576-1195612 37 CP022908.1 2891138-2891174 2 0.946
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1191664-1191700 2 0.946
CP022908_8 8.2|1195632|37|CP022908|CRT 1195632-1195668 37 CP022908.1 1195744-1195780 2 0.946
CP022908_8 8.3|1195688|37|CP022908|CRT 1195688-1195724 37 CP022908.1 1191720-1191756 2 0.946
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 CP022908.1 1495045-1495077 2 0.939
CP022908_12 12.1|2423831|33|CP022908|CRT 2423831-2423863 33 CP022908.1 821771-821803 2 0.939
CP022908_12 12.1|2423831|33|CP022908|CRT 2423831-2423863 33 CP022908.1 1406483-1406515 2 0.939
CP022908_12 12.1|2423831|33|CP022908|CRT 2423831-2423863 33 CP022908.1 1495045-1495077 2 0.939
CP022908_12 12.1|2423831|33|CP022908|CRT 2423831-2423863 33 CP022908.1 2706753-2706785 2 0.939
CP022908_12 12.2|2423887|36|CP022908|CRT 2423887-2423922 36 CP022908.1 1722242-1722277 2 0.944
CP022908_12 12.2|2423887|36|CP022908|CRT 2423887-2423922 36 CP022908.1 2116996-2117031 2 0.944

1. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 2891143-2891171, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

2. spacer 6.1|866333|34|CP022908|CRISPRCasFinder matches to position: 1406528-1406561, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

3. spacer 6.1|866333|34|CP022908|CRISPRCasFinder matches to position: 1494999-1495032, mismatch: 0, identity: 1.0

attgggaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
**********************************

4. spacer 8.2|1195632|37|CP022908|CRT matches to position: 378740-378776, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

5. spacer 8.2|1195632|37|CP022908|CRT matches to position: 821763-821799, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

6. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1051146-1051182, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

7. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1406487-1406523, mismatch: 0, identity: 1.0

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
*************************************

8. spacer 8.3|1195688|37|CP022908|CRT matches to position: 152877-152913, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

9. spacer 8.3|1195688|37|CP022908|CRT matches to position: 656954-656990, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

10. spacer 8.3|1195688|37|CP022908|CRT matches to position: 774329-774365, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

11. spacer 8.3|1195688|37|CP022908|CRT matches to position: 775299-775335, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

12. spacer 8.3|1195688|37|CP022908|CRT matches to position: 821819-821855, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

13. spacer 8.3|1195688|37|CP022908|CRT matches to position: 1406545-1406581, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

14. spacer 8.3|1195688|37|CP022908|CRT matches to position: 1494979-1495015, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

15. spacer 8.3|1195688|37|CP022908|CRT matches to position: 2107701-2107737, mismatch: 0, identity: 1.0

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgcaagtt	Protospacer
*************************************

16. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 378857-378885, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

17. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 378912-378940, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

18. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 1900723-1900751, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

19. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to position: 784727-784752, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** ********************

20. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to position: 1195727-1195752, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

21. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to position: 2891111-2891136, mismatch: 1, identity: 0.962

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
************.*************

22. spacer 7.1|931128|26|CP022908|CRT matches to position: 931072-931097, mismatch: 1, identity: 0.962

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaggctggtgg	Protospacer
***********************.**

23. spacer 7.3|931242|26|CP022908|CRT matches to position: 821791-821816, mismatch: 1, identity: 0.962

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacacagaagctgacga	Protospacer
**********************.***

24. spacer 8.1|1195576|37|CP022908|CRT matches to position: 1900720-1900756, mismatch: 1, identity: 0.973

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacagacaatgcaagttg	Protospacer
*******.*****************************

25. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1495037-1495073, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agatgacgaaaagtcagcttacaataatgtgcaagtt	Protospacer
** **********************************

26. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1722295-1722331, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttactataatgtgcaagtt	Protospacer
********************** **************

27. spacer 8.2|1195632|37|CP022908|CRT matches to position: 2706745-2706781, mismatch: 1, identity: 0.973

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtgcgagtt	Protospacer
********************************.****

28. spacer 8.3|1195688|37|CP022908|CRT matches to position: 1077280-1077316, mismatch: 1, identity: 0.973

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctacagacaatgtaagtt	Protospacer
*******************************.*****

29. spacer 8.3|1195688|37|CP022908|CRT matches to position: 2591872-2591908, mismatch: 1, identity: 0.973

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggattcccaatttctagagacaatgcaagtt	Protospacer
********************** **************

30. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to position: 821771-821803, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

31. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to position: 1406483-1406515, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

32. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to position: 1722303-1722335, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattatagtaagctgacttttcgtcagcttctg	Protospacer
****** **************************

33. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to position: 2706753-2706785, mismatch: 1, identity: 0.97

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
******.**************************

34. spacer 12.2|2423887|36|CP022908|CRT matches to position: 1900716-1900751, mismatch: 1, identity: 0.972

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaattctcta	Protospacer
************************.***********

35. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 866375-866403, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

36. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 950767-950795, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

37. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 1722242-1722270, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

38. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 2116996-2117024, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

39. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to position: 2617158-2617186, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

40. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to position: 784783-784808, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgcctgcttctatgttggggccccg	Protospacer
***** ******.*************

41. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to position: 931072-931097, mismatch: 2, identity: 0.923

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccaccagcctctgtgttggggccccg	Protospacer
**.*****.*****************

42. spacer 7.1|931128|26|CP022908|CRT matches to position: 784727-784752, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacacagaagcaggcgg	Protospacer
*****************.** *****

43. spacer 7.1|931128|26|CP022908|CRT matches to position: 1195727-1195752, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

44. spacer 7.1|931128|26|CP022908|CRT matches to position: 2891111-2891136, mismatch: 2, identity: 0.923

cggggccccaacacagaggctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
*************.***.********

45. spacer 7.3|931242|26|CP022908|CRT matches to position: 378723-378748, mismatch: 2, identity: 0.923

cggggccccaacacagaagctggcga	CRISPR spacer
cggggccccaacaaagaagctgacga	Protospacer
************* ********.***

46. spacer 8.1|1195576|37|CP022908|CRT matches to position: 866370-866406, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

47. spacer 8.1|1195576|37|CP022908|CRT matches to position: 1722237-1722273, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

48. spacer 8.1|1195576|37|CP022908|CRT matches to position: 2116991-2117027, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaggaaattctacagacaatgcaagttg	Protospacer
*******.***.*************************

49. spacer 8.1|1195576|37|CP022908|CRT matches to position: 2617155-2617191, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttg	Protospacer
*******.****************.************

50. spacer 8.1|1195576|37|CP022908|CRT matches to position: 2891138-2891174, mismatch: 2, identity: 0.946

gaatttcaaaaagaaattctacagacaatgcaagttg	CRISPR spacer
gaatttcgaaaagaaattctacaaacaatgcaagttg	Protospacer
*******.***************.*************

51. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1191664-1191700, mismatch: 2, identity: 0.946

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctggcgaaaagtcagcttacaaaaatgtgcaagtt	Protospacer
*****.****************** ************

52. spacer 8.2|1195632|37|CP022908|CRT matches to position: 1195744-1195780, mismatch: 2, identity: 0.946

agctgacgaaaagtcagcttacaataatgtgcaagtt	CRISPR spacer
agctggcggaaagtcagcttacaataatgtgcaagtt	Protospacer
*****.**.****************************

53. spacer 8.3|1195688|37|CP022908|CRT matches to position: 1191720-1191756, mismatch: 2, identity: 0.946

gaaattggattcccaatttctacagacaatgcaagtt	CRISPR spacer
gaaattggaaccccaatttctacagacaatgcaagtt	Protospacer
********* .**************************

54. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to position: 1495045-1495077, mismatch: 2, identity: 0.939

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
******.******************* ******

55. spacer 12.1|2423831|33|CP022908|CRT matches to position: 821771-821803, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

56. spacer 12.1|2423831|33|CP022908|CRT matches to position: 1406483-1406515, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

57. spacer 12.1|2423831|33|CP022908|CRT matches to position: 1495045-1495077, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcatcttctg	Protospacer
********** ***************.******

58. spacer 12.1|2423831|33|CP022908|CRT matches to position: 2706753-2706785, mismatch: 2, identity: 0.939

cattattgtatgctgacttttcgtcaccttctg	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctg	Protospacer
********** *************** ******

59. spacer 12.2|2423887|36|CP022908|CRT matches to position: 1722242-1722277, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaattctcta	Protospacer
*******.****************.***********

60. spacer 12.2|2423887|36|CP022908|CRT matches to position: 2116996-2117031, mismatch: 2, identity: 0.944

tgcattgtctgtagaatttctttttgaaattctcta	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaattctcta	Protospacer
********************.***.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP022908_1 1.1|46254|53|CP022908|CRISPRCasFinder 46254-46306 53 NZ_LR735436 Staphylococcus epidermidis strain none isolate Se_BPH0736 plasmid 3 9028-9080 1 0.981
CP022908_7 7.4|931298|53|CP022908|CRT 931298-931350 53 MG543995 Staphylococcus phage UPMK_1, partial genome 76246-76298 4 0.925
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 NZ_CP034332 Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence 3359-3384 5 0.808
CP022908_5 5.1|821735|26|CP022908|CRISPRCasFinder 821735-821760 26 NZ_CP022605 Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence 715511-715536 5 0.808
CP022908_7 7.3|931242|26|CP022908|CRT 931242-931267 26 NZ_CP022541 Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence 333735-333760 5 0.808
CP022908_4 4.1|816333|29|CP022908|CRISPRCasFinder 816333-816361 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
CP022908_10 10.1|2106252|33|CP022908|CRISPRCasFinder 2106252-2106284 33 NC_021536 Synechococcus phage S-IOM18 genomic sequence 159745-159777 10 0.697

1. spacer 1.1|46254|53|CP022908|CRISPRCasFinder matches to NZ_LR735436 (Staphylococcus epidermidis strain none isolate Se_BPH0736 plasmid 3) position: , mismatch: 1, identity: 0.981

ctataataactaacgaaagaattataacacctattatatagagaataaagttt	CRISPR spacer
ctataataactaacgaaagaattataacacctattatatagagaataaagatt	Protospacer
************************************************** **

2. spacer 7.4|931298|53|CP022908|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ggtgggacgacgaaataaattttgcgaaaatatcatttctgtcccactcccaa	CRISPR spacer
ggtgggacgacgaaataaattttgagaaactatcatttctgtcccactccctt	Protospacer
************************ **** *********************  

3. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

4. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to NZ_CP034332 (Tabrizicola piscis strain K13M18 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtctgggcctac	Protospacer
****************. *****.  

5. spacer 5.1|821735|26|CP022908|CRISPRCasFinder matches to NZ_CP022605 (Ochrobactrum quorumnocens strain A44 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ccgccagcttctgtgttggggccccg	CRISPR spacer
ccgccagcttctgtgtttggccctga	Protospacer
***************** ** **. .

6. spacer 7.3|931242|26|CP022908|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

cggggccccaacacagaagctggcga	CRISPR spacer
taaggcctcaacacagaagctggcgt	Protospacer
...****.***************** 

7. spacer 4.1|816333|29|CP022908|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

8. spacer 10.1|2106252|33|CP022908|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 10, identity: 0.697

cattatcgtaagctgacttttcgtcagcttctg	CRISPR spacer
ttttatcgtaaggtgagttttcgtcaagcacct	Protospacer
. ********** *** *********. . *. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 52470 : 58311 8 Streptococcus_phage(75.0%) NA NA
DBSCAN-SWA_2 753418 : 761238 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 773210 : 787941 12 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 867871 : 889080 33 Staphylococcus_phage(77.78%) NA NA
DBSCAN-SWA_5 1112725 : 1159073 73 Staphylococcus_phage(85.71%) portal,holin,tail,head NA
DBSCAN-SWA_6 1549001 : 1637408 102 Staphylococcus_phage(78.67%) portal,lysis,terminase,protease,head,tRNA,tail,capsid,holin NA
DBSCAN-SWA_7 1693864 : 1702176 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_8 1771235 : 1780278 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_9 1905949 : 1988651 71 Staphylococcus_phage(93.55%) protease,tRNA NA
DBSCAN-SWA_10 2017174 : 2096277 89 Staphylococcus_phage(86.76%) portal,lysis,terminase,protease,head,tRNA,tail,capsid,holin NA
DBSCAN-SWA_11 2850205 : 2867730 16 Streptococcus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage