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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP022905 Staphylococcus aureus strain 628 chromosome, complete genome 10 crisprs cas3,DEDDh,csa3,DinG,RT,WYL 10 3 9 0

Results visualization

1. CP022905
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_1 170181-170265 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_2 429971-430072 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_3 787356-787438 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_4 830143-830221 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_5 835598-835867 Unclear NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_6 897427-897508 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_7 984211-984292 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_8 1420896-1420980 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_9 2292165-2292245 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP022905_11 2412529-2412609 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP022905_1 1.1|170207|33|CP022905|CRISPRCasFinder 170207-170239 33 CP022905.1 1693617-1693649 0 1.0
CP022905_4 4.1|830167|31|CP022905|CRISPRCasFinder 830167-830197 31 CP022905.1 295083-295113 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 170168-170189 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 295008-295029 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 295118-295139 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 660644-660665 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 786397-786418 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 897500-897521 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1086559-1086580 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1406349-1406370 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1420883-1420904 0 1.0
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1693725-1693746 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 170168-170189 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 295008-295029 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 295118-295139 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 660644-660665 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 786397-786418 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 897500-897521 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1086559-1086580 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1406349-1406370 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1420883-1420904 0 1.0
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1693725-1693746 0 1.0
CP022905_7 7.1|984235|34|CP022905|CRISPRCasFinder 984235-984268 34 CP022905.1 830142-830175 0 1.0
CP022905_7 7.1|984235|34|CP022905|CRISPRCasFinder 984235-984268 34 CP022905.1 1906633-1906666 0 1.0
CP022905_4 4.1|830167|31|CP022905|CRISPRCasFinder 830167-830197 31 CP022905.1 295028-295058 1 0.968
CP022905_4 4.1|830167|31|CP022905|CRISPRCasFinder 830167-830197 31 CP022905.1 1386468-1386498 1 0.968
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1386389-1386410 1 0.955
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 1386622-1386643 1 0.955
CP022905_5 5.1|835634|22|CP022905|CRT 835634-835655 22 CP022905.1 2176840-2176861 1 0.955
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 787347-787369 1 0.957
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 787625-787647 1 0.957
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 1086500-1086522 1 0.957
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 1693608-1693630 1 0.957
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 2401700-2401722 1 0.957
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1386389-1386410 1 0.955
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 1386622-1386643 1 0.955
CP022905_5 5.3|835751|22|CP022905|CRT 835751-835772 22 CP022905.1 2176840-2176861 1 0.955
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 787347-787369 1 0.957
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 787625-787647 1 0.957
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 1086500-1086522 1 0.957
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 1693608-1693630 1 0.957
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 2401700-2401722 1 0.957
CP022905_6 6.1|897451|34|CP022905|CRISPRCasFinder 897451-897484 34 CP022905.1 1693617-1693650 1 0.971
CP022905_7 7.1|984235|34|CP022905|CRISPRCasFinder 984235-984268 34 CP022905.1 1294349-1294382 1 0.971
CP022905_8 8.1|1420922|33|CP022905|CRISPRCasFinder 1420922-1420954 33 CP022905.1 1693617-1693649 1 0.97
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 842886-842916 1 0.968
CP022905_1 1.1|170207|33|CP022905|CRISPRCasFinder 170207-170239 33 CP022905.1 1605295-1605327 2 0.939
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 984189-984211 2 0.913
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 CP022905.1 1605314-1605336 2 0.913
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 984189-984211 2 0.913
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 CP022905.1 1605314-1605336 2 0.913
CP022905_7 7.1|984235|34|CP022905|CRISPRCasFinder 984235-984268 34 CP022905.1 1689243-1689276 2 0.941
CP022905_7 7.1|984235|34|CP022905|CRISPRCasFinder 984235-984268 34 CP022905.1 2870555-2870588 2 0.941
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 70386-70416 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 374957-374987 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 660699-660729 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 897762-897792 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 1087898-1087928 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 1406286-1406316 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 1605253-1605283 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 1693661-1693691 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 1899703-1899733 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 2401753-2401783 2 0.935
CP022905_11 11.1|2412554|31|CP022905|CRISPRCasFinder 2412554-2412584 31 CP022905.1 2577298-2577328 2 0.935

1. spacer 1.1|170207|33|CP022905|CRISPRCasFinder matches to position: 1693617-1693649, mismatch: 0, identity: 1.0

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
*********************************

2. spacer 4.1|830167|31|CP022905|CRISPRCasFinder matches to position: 295083-295113, mismatch: 0, identity: 1.0

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattgcc	Protospacer
*******************************

3. spacer 5.1|835634|22|CP022905|CRT matches to position: 170168-170189, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

4. spacer 5.1|835634|22|CP022905|CRT matches to position: 295008-295029, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

5. spacer 5.1|835634|22|CP022905|CRT matches to position: 295118-295139, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

6. spacer 5.1|835634|22|CP022905|CRT matches to position: 660644-660665, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

7. spacer 5.1|835634|22|CP022905|CRT matches to position: 786397-786418, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

8. spacer 5.1|835634|22|CP022905|CRT matches to position: 897500-897521, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

9. spacer 5.1|835634|22|CP022905|CRT matches to position: 1086559-1086580, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

10. spacer 5.1|835634|22|CP022905|CRT matches to position: 1406349-1406370, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

11. spacer 5.1|835634|22|CP022905|CRT matches to position: 1420883-1420904, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

12. spacer 5.1|835634|22|CP022905|CRT matches to position: 1693725-1693746, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

13. spacer 5.3|835751|22|CP022905|CRT matches to position: 170168-170189, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

14. spacer 5.3|835751|22|CP022905|CRT matches to position: 295008-295029, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

15. spacer 5.3|835751|22|CP022905|CRT matches to position: 295118-295139, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

16. spacer 5.3|835751|22|CP022905|CRT matches to position: 660644-660665, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

17. spacer 5.3|835751|22|CP022905|CRT matches to position: 786397-786418, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

18. spacer 5.3|835751|22|CP022905|CRT matches to position: 897500-897521, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

19. spacer 5.3|835751|22|CP022905|CRT matches to position: 1086559-1086580, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

20. spacer 5.3|835751|22|CP022905|CRT matches to position: 1406349-1406370, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

21. spacer 5.3|835751|22|CP022905|CRT matches to position: 1420883-1420904, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

22. spacer 5.3|835751|22|CP022905|CRT matches to position: 1693725-1693746, mismatch: 0, identity: 1.0

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttcgaaa	Protospacer
**********************

23. spacer 7.1|984235|34|CP022905|CRISPRCasFinder matches to position: 830142-830175, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

24. spacer 7.1|984235|34|CP022905|CRISPRCasFinder matches to position: 1906633-1906666, mismatch: 0, identity: 1.0

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgaaaagaaattctacaa	Protospacer
**********************************

25. spacer 4.1|830167|31|CP022905|CRISPRCasFinder matches to position: 295028-295058, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttgcattacc	Protospacer
****************************.**

26. spacer 4.1|830167|31|CP022905|CRISPRCasFinder matches to position: 1386468-1386498, mismatch: 1, identity: 0.968

ctgtgttggggccccgccaacttgcattgcc	CRISPR spacer
ctgtgttggggccccgccaacttccattgcc	Protospacer
*********************** *******

27. spacer 5.1|835634|22|CP022905|CRT matches to position: 1386389-1386410, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

28. spacer 5.1|835634|22|CP022905|CRT matches to position: 1386622-1386643, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

29. spacer 5.1|835634|22|CP022905|CRT matches to position: 2176840-2176861, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

30. spacer 5.2|835692|23|CP022905|CRT matches to position: 787347-787369, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

31. spacer 5.2|835692|23|CP022905|CRT matches to position: 787625-787647, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

32. spacer 5.2|835692|23|CP022905|CRT matches to position: 1086500-1086522, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

33. spacer 5.2|835692|23|CP022905|CRT matches to position: 1693608-1693630, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

34. spacer 5.2|835692|23|CP022905|CRT matches to position: 2401700-2401722, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

35. spacer 5.3|835751|22|CP022905|CRT matches to position: 1386389-1386410, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

36. spacer 5.3|835751|22|CP022905|CRT matches to position: 1386622-1386643, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttctttacgaaa	Protospacer
**************** *****

37. spacer 5.3|835751|22|CP022905|CRT matches to position: 2176840-2176861, mismatch: 1, identity: 0.955

cctgtagaatttcttttcgaaa	CRISPR spacer
cctgtagaatttcttttagaaa	Protospacer
***************** ****

38. spacer 5.4|835809|23|CP022905|CRT matches to position: 787347-787369, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

39. spacer 5.4|835809|23|CP022905|CRT matches to position: 787625-787647, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

40. spacer 5.4|835809|23|CP022905|CRT matches to position: 1086500-1086522, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

41. spacer 5.4|835809|23|CP022905|CRT matches to position: 1693608-1693630, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

42. spacer 5.4|835809|23|CP022905|CRT matches to position: 2401700-2401722, mismatch: 1, identity: 0.957

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatccaat	Protospacer
**************.********

43. spacer 6.1|897451|34|CP022905|CRISPRCasFinder matches to position: 1693617-1693650, mismatch: 1, identity: 0.971

attgagaatccaatttctctttgttggggcccat	CRISPR spacer
attgggaatccaatttctctttgttggggcccat	Protospacer
****.*****************************

44. spacer 7.1|984235|34|CP022905|CRISPRCasFinder matches to position: 1294349-1294382, mismatch: 1, identity: 0.971

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacaaagaatttcgaaaagaaattctacaa	Protospacer
********.*************************

45. spacer 8.1|1420922|33|CP022905|CRISPRCasFinder matches to position: 1693617-1693649, mismatch: 1, identity: 0.97

tgggccccaacacagagaaattggattcccaat	CRISPR spacer
tgggccccaacaaagagaaattggattcccaat	Protospacer
************ ********************

46. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 842886-842916, mismatch: 1, identity: 0.968

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgtcagct	Protospacer
***********************.*******

47. spacer 1.1|170207|33|CP022905|CRISPRCasFinder matches to position: 1605295-1605327, mismatch: 2, identity: 0.939

tgggccccaacaaagagaaattggattcccaat	CRISPR spacer
tggaccccaacaaagagaaattgtattcccaat	Protospacer
***.******************* *********

48. spacer 5.2|835692|23|CP022905|CRT matches to position: 984189-984211, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

49. spacer 5.2|835692|23|CP022905|CRT matches to position: 1605314-1605336, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

50. spacer 5.4|835809|23|CP022905|CRT matches to position: 984189-984211, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgttgaaattgggaatccaat	Protospacer
***** ********.********

51. spacer 5.4|835809|23|CP022905|CRT matches to position: 1605314-1605336, mismatch: 2, identity: 0.913

tctgtagaaattggaaatccaat	CRISPR spacer
tctgtagaaattgggaatacaat	Protospacer
**************.*** ****

52. spacer 7.1|984235|34|CP022905|CRISPRCasFinder matches to position: 1689243-1689276, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacacagagaatttcgataagaaattccacaa	Protospacer
******************* *********.****

53. spacer 7.1|984235|34|CP022905|CRISPRCasFinder matches to position: 2870555-2870588, mismatch: 2, identity: 0.941

ccaacacagagaatttcgaaaagaaattctacaa	CRISPR spacer
ccaacaaaaagaatttcgaaaagaaattctacaa	Protospacer
****** *.*************************

54. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 70386-70416, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

55. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 374957-374987, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

56. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 660699-660729, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

57. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 897762-897792, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

58. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 1087898-1087928, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

59. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 1406286-1406316, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

60. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 1605253-1605283, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

61. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 1693661-1693691, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

62. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 1899703-1899733, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

63. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 2401753-2401783, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**********************..*******

64. spacer 11.1|2412554|31|CP022905|CRISPRCasFinder matches to position: 2577298-2577328, mismatch: 2, identity: 0.935

cacattattgtaagctgactttctgtcagct	CRISPR spacer
cacattattgtaagctgactttccgccagct	Protospacer
***********************.*.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
CP022905_5 5.2|835692|23|CP022905|CRT 835692-835714 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 AP014226 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS *** 28490-28512 3 0.87
CP022905_5 5.4|835809|23|CP022905|CRT 835809-835831 23 AP014225 Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS *** 24653-24675 3 0.87
CP022905_10 10.1|2304512|34|CP022905|CRISPRCasFinder 2304512-2304545 34 JN882286 Cronobacter phage vB_CsaP_GAP52, complete genome 23034-23067 8 0.765
CP022905_10 10.1|2304512|34|CP022905|CRISPRCasFinder 2304512-2304545 34 CP030544 Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence 7567-7600 8 0.765

1. spacer 5.2|835692|23|CP022905|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

2. spacer 5.2|835692|23|CP022905|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

3. spacer 5.4|835809|23|CP022905|CRT matches to AP014226 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S44-C3, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

4. spacer 5.4|835809|23|CP022905|CRT matches to AP014225 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C9-MedDCM-OCT-S41-C89, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 3, identity: 0.87

tctgtagaaattggaaatccaat	CRISPR spacer
actgtagaaaatggaaatccaac	Protospacer
 ********* ***********.

5. spacer 10.1|2304512|34|CP022905|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgcatatctttagctttatagcttttatatgct	Protospacer
******************** *.** .*  **  

6. spacer 10.1|2304512|34|CP022905|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgcatatctttagctttattgtttgcaactggg	CRISPR spacer
ttgaataactttagctttattgttataaacagta	Protospacer
*** *** ****************   *** * .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 398446 : 415700 27 Staphylococcus_phage(76.19%) NA NA
DBSCAN-SWA_2 765475 : 773296 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_3 788085 : 801748 11 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 852600 : 869562 25 Staphylococcus_phage(81.25%) integrase attL 853972:853987|attR 861370:861385
DBSCAN-SWA_5 986074 : 1033464 67 Staphylococcus_phage(98.51%) capsid,protease,portal,tail,holin NA
DBSCAN-SWA_6 1166681 : 1232375 60 Staphylococcus_phage(94.12%) protease,tRNA NA
DBSCAN-SWA_7 1362266 : 1371309 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_8 1939823 : 1985535 72 Staphylococcus_phage(75.36%) portal,head,tail,holin NA
DBSCAN-SWA_9 2748062 : 2758416 11 Streptococcus_phage(80.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage