CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031113	Bordetella pertussis strain UK39 chromosome, complete genome	5 crisprs	DEDDh,csa3,cas3,DinG	0	0	30	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031113_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031113_1

250571-250655

Orphan

Consensus_repeat	Method
GGTGCCTGTCCCCGCGGGGACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031113_1

>merge|CP031113|1|250571-250655|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAGATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAGGGTGCCTGTCCCCGCGGGGACAG

>CP031113|1|1|250571-250655|CRISPRCasFinder
GGTGCCTGTCCCCGCGGGGACAG	ATACCGTCTTGGCCGTCAAGCGTTCATGGCGTATGACAG
GGTGCCTGTCCCCGCGGGGACAG

Protein	Signature genes	Signature genes Name	Protein_function
CP031113.1\|AXK08225.1\|257772_258753_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
CP031113.1\|AXK08217.1\|247861_248560_-\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|319796
CP031113.1\|AXK08221.1\|251603_253493_-\|DNA-mismatch-repair-protein-MutL	unknown	unknown	gnl\|CDD\|234630
CP031113.1\|AXK08222.1\|253579_254218_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182775
CP031113.1\|AXK08223.1\|255676_256213_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|223873
CP031113.1\|AXK08211.1\|239528_240272_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
CP031113.1\|AXK08212.1\|240315_241359_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270320
CP031113.1\|AXK08227.1\|259936_260836_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP031113.1\|AXK08218.1\|248556_249258_-\|DnaA-regulatory-inactivator-Hda	unknown	unknown	gnl\|CDD\|236347
CP031113.1\|AXK08224.1\|256364_257756_+\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
CP031113.1\|AXK08226.1\|258888_259872_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	unknown	unknown	gnl\|CDD\|270295
CP031113.1\|AXK08214.1\|245042_245999_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031113.1\|AXK08220.1\|250665_251607_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl\|CDD\|234626
CP031113.1\|AXK08215.1\|246017_246509_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|172582
CP031113.1\|AXK08228.1\|260942_262697_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
CP031113.1\|AXK11401.1\|254360_255605_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|182376
CP031113.1\|AXK08210.1\|238096_238507_+\|4-carboxymuconolactone-decarboxylase	unknown	unknown	gnl\|CDD\|131478
CP031113.1\|AXK08219.1\|249510_250560_+\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
CP031113.1\|AXK08213.1\|241529_243632_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129868
CP031113.1\|AXK08216.1\|246505_247861_-\|polynucleotide-adenylyltransferase-PcnB	unknown	unknown	gnl\|CDD\|130997

Protein	Function_ID	Function_description	E-value
CP031113.1\|AXK08225.1\|257772_258753_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.13912e-41
CP031113.1\|AXK08217.1\|247861_248560_-\|HAD-IB-family-hydrolase	gnl\|CDD\|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.91431e-64
CP031113.1\|AXK08221.1\|251603_253493_-\|DNA-mismatch-repair-protein-MutL	gnl\|CDD\|234630	PRK00095, mutL, DNA mismatch repair endonuclease MutL.	0
CP031113.1\|AXK08222.1\|253579_254218_+\|hypothetical-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	1.10927e-69
CP031113.1\|AXK08223.1\|255676_256213_-\|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	2.28113e-54
CP031113.1\|AXK08211.1\|239528_240272_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	5.58304e-45
CP031113.1\|AXK08212.1\|240315_241359_-\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270320	cd13602, PBP2_TRAP_BpDctp6_7, Substrate-binding domain of a pyroglutamic acid binding DctP subfamily of the tripartite ATP-independent periplasmic transporters; contains the type 2 periplasmic binding protein fold. DctP6 and DctP7 groups of the TRAP transporters that involved in pyroglutamic acid transport. TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP; often called the P subunit) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process (the M subunit) and a smaller membrane of unknown function (the Q subunit). The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.99378e-85
CP031113.1\|AXK08227.1\|259936_260836_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.62875e-38
CP031113.1\|AXK08218.1\|248556_249258_-\|DnaA-regulatory-inactivator-Hda	gnl\|CDD\|236347	PRK08903, PRK08903, DnaA regulatory inactivator Hda; Validated.	2.81236e-100
CP031113.1\|AXK08224.1\|256364_257756_+\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
CP031113.1\|AXK08226.1\|258888_259872_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE	gnl\|CDD\|270295	cd13577, PBP2_BugE_Glu, Glutamate transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	4.35876e-158
CP031113.1\|AXK08214.1\|245042_245999_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	6.01101e-118
CP031113.1\|AXK08220.1\|250665_251607_-\|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl\|CDD\|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	4.17279e-156
CP031113.1\|AXK08215.1\|246017_246509_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|172582	PRK14092, PRK14092, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.	2.78166e-87
CP031113.1\|AXK08228.1\|260942_262697_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
CP031113.1\|AXK11401.1\|254360_255605_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|182376	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA.	7.29619e-86
CP031113.1\|AXK08210.1\|238096_238507_+\|4-carboxymuconolactone-decarboxylase	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	1.36265e-47
CP031113.1\|AXK08219.1\|249510_250560_+\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
CP031113.1\|AXK08213.1\|241529_243632_+\|hypothetical-protein	gnl\|CDD\|129868	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit. The Tripartite ATP-independent Periplasmic Transporter (TRAP-T) Family (TC 2.A.56)- DctM subunit TRAP-T family permeases generally consist of three components, and these systems have so far been found in Gram-negative bacteria, Gram-postive bacteria and archaea. Only one member of the family has been both sequenced and functionally characterized. This system is the DctPQM system of Rhodobacter capsulatus (Forward et al., 1997). DctP is a periplasmic dicarboxylate (malate, fumarate, succinate) binding receptor that is biochemically well-characterized. DctQ is an integral cytoplasmic membrane protein with 4 putative transmembrane a-helical spanners (TMSs). DctM is a second integral cytoplasmic membrane protein with 12 putative TMSs. These proteins have been shown to be both necessary and sufficient for the proton motive force-dependent uptake of dicarboxylates into R. capsulatus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.77055e-96
CP031113.1\|AXK08216.1\|246505_247861_-\|polynucleotide-adenylyltransferase-PcnB	gnl\|CDD\|130997	TIGR01942, pcnB, poly(A) polymerase. This model describes the pcnB family of poly(A) polymerases (also known as plasmid copy number protein). These enzymes sequentially add adenosine nucleotides to the 3' end of RNAs, targeting them for degradation by the cell. This was originally described for anti-sense RNAs, but was later demonstrated for mRNAs as well. Members of this family are as yet limited to the gamma- and beta-proteobacteria, with putative members in the Chlamydiacae and spirochetes. This family has homology to tRNA nucleotidyltransferase (cca).	4.58369e-147

>CP031113.1|AXK08219.1|249510_250560_+|phosphoribosylformylglycinamidine-cyclo-ligase
MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIGGFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEPLYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAVGAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDVVMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPKLFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQDGMAQTVVV
>CP031113.1|AXK08218.1|248556_249258_-|DnaA-regulatory-inactivator-Hda
MNRQLLLDVLPAPAPALNNYIAGPNGQALAAAHALTAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLRAMLADPHSQAT
>CP031113.1|AXK08217.1|247861_248560_-|HAD-IB-family-hydrolase
MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVIDLFDHLEDAKS
>CP031113.1|AXK08216.1|246505_247861_-|polynucleotide-adenylyltransferase-PcnB
MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCDVLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEVIDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMASLIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELALERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTEKLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANGDDATRAEMIEETAHLPRETGDAPAQKRRRPRRRPSNRPREPQ
>CP031113.1|AXK08215.1|246017_246509_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MNGSPASTLAYVGLGASLGDAAATLRSVLAELAAAPGILACKASRLYRTAPVEAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLLLYGEQAIDHPRLSVPHPRMHERAFVLAPLCELVPALRLAQGDCAALLAALEDQAIEPLR
>CP031113.1|AXK08214.1|245042_245999_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDALARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQVPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQALATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTGSKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQMLERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP
>CP031113.1|AXK08213.1|241529_243632_+|hypothetical-protein
MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRACGALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQVELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWMPELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAGGRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVASMMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGGLLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDMIERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACFMLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAAIGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVVNLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFLVLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMWLPQQVK
>CP031113.1|AXK08212.1|240315_241359_-|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPGDGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADEPRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPIHKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSLEFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFVSNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTTLGKSASN
>CP031113.1|AXK08211.1|239528_240272_-|GntR-family-transcriptional-regulator
MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVGRFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIYQVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDGAGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSLHVRNAASVAIAILQDSLADAAATAE
>CP031113.1|AXK08210.1|238096_238507_+|4-carboxymuconolactone-decarboxylase
MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKLVTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVLQAAIYCGVPAALDAMKAVREVVETMEKEGAFA
>CP031113.1|AXK08220.1|250665_251607_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMDIGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTMLYYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQRALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAGLVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLTWLRAQPERVIIDCLAGDAVARTVDAMARALPD
>CP031113.1|AXK08221.1|251603_253493_-|DNA-mismatch-repair-protein-MutL
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLPVLAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDTAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGIPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>CP031113.1|AXK08222.1|253579_254218_+|hypothetical-protein
MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPFLPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLDRNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVISLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ
>CP031113.1|AXK11401.1|254360_255605_-|N-acetylmuramoyl-L-alanine-amidase
MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAALNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDLYPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAPPIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQPYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGASSTQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKINRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDRYFTANPPLARVGDVS
>CP031113.1|AXK08223.1|255676_256213_-|bifunctional-alanine-racemase/tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MSAPPTTLCLHLPDEAATENLARQLAPLVDGRRGGQPGGQIHLQGDLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAGFRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVPPPTARSLPAPPPADA
>CP031113.1|AXK08224.1|256364_257756_+|class-II-fumarate-hydratase
MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVAAMARLKRAAAKVNAELGELDPQVADAIMRAADEVIAGKWPDEFPLSVWQTGSGTQSNMNMNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPALKALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLHQLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALKTLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVMGNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITELVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDMTNARR
>CP031113.1|AXK08225.1|257772_258753_-|AEC-family-transporter
MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRHKLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACGVALAWLAGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAVYGLARHSGNGLLRELARNPLLVSTLLSLACNLAGLSLPGPIDTVMARLGAAALALGIMCVGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTASAAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN
>CP031113.1|AXK08226.1|258888_259872_+|tripartite-tricarboxylate-transporter-substrate-binding-protein-BugE
MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGSTDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNPACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSGTCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKLRAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALKDPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD
>CP031113.1|AXK08227.1|259936_260836_-|LysR-family-transcriptional-regulator
MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGFKLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLGLLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANNHPGLTRTSLGHTELVHLSRLPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYVACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIERLRQACSVLQAQPAPQPE
>CP031113.1|AXK08228.1|260942_262697_+|gamma-glutamyltransferase
MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERAQAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVHYDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHRQHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVGHRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVREPVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFADRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAIEVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVANRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIALPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPRREGLALGD

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Crispr_ID: CP031113_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031113_2

623945-624054

Orphan

Consensus_repeat	Method
GGGGACAGATACCGTCTTGGCCGTCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031113_2

>merge|CP031113|2|623945-624054|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAAGCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGCGGGGACAGATACCGTCTTGGCAGTCAA

>CP031113|2|2|623945-624054|CRISPRCasFinder
GGGGACAGATACCGTCTTGGCCGTCAA	GCGTCGATGGCGTACAGCAGTGTGCCTGTCCCGGCGGGGACAGGCACCCTCCCTGC
GGGGACAGATACCGTCTTGGCAGTCAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031113.1\|AXK08530.1\|638686_639775_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187652
CP031113.1\|AXK08522.1\|626186_627596_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182727
CP031113.1\|AXK08528.1\|634408_637387_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375438
CP031113.1\|AXK08519.1\|622732_623413_-\|tellurite-resistance-TerB-family-protein	unknown	unknown	gnl\|CDD\|377342
CP031113.1\|AXK08529.1\|637739_638690_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK08516.1\|618505_619207_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|181883
CP031113.1\|AXK08515.1\|617081_618506_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
CP031113.1\|AXK08514.1\|614671_616012_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
CP031113.1\|AXK08526.1\|629704_630655_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK08523.1\|627606_628407_-\|hydroxyacylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|274569
CP031113.1\|AXK08525.1\|629240_629708_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
CP031113.1\|AXK08520.1\|623550_623943_+\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|224679
CP031113.1\|AXK08517.1\|620710_621661_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK08512.1\|611802_612681_-\|septum-site-determining-protein-MinC	unknown	unknown	gnl\|CDD\|178806
CP031113.1\|AXK08518.1\|621729_622728_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031113.1\|AXK08513.1\|612792_614556_-\|glutamine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235424
CP031113.1\|AXK08527.1\|632603_633482_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|366126
CP031113.1\|AXK08521.1\|625306_626092_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	unknown	unknown	gnl\|CDD\|180789
CP031113.1\|AXK08524.1\|628427_629198_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
CP031113.1\|AXK08511.1\|610874_611690_-\|septum-site-determining-protein-MinD	unknown	unknown	gnl\|CDD\|225447

Protein	Function_ID	Function_description	E-value
CP031113.1\|AXK08530.1\|638686_639775_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187652	cd08948, 5beta-POR_like_SDR_a, progesterone 5-beta-reductase-like proteins (5beta-POR), atypical (a) SDRs. 5beta-POR catalyzes the reduction of progesterone to 5beta-pregnane-3,20-dione in Digitalis plants. This subgroup of atypical-extended SDRs, shares the structure of an extended SDR, but has a different glycine-rich nucleotide binding motif (GXXGXXG) and lacks the YXXXK active site motif of classical and extended SDRs. Tyr-179 and Lys 147 are present in the active site, but not in the usual SDR configuration. Given these differences, it has been proposed that this subfamily represents a new SDR class. Other atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.76863e-97
CP031113.1\|AXK08522.1\|626186_627596_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|182727	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional.	5.28635e-76
CP031113.1\|AXK08528.1\|634408_637387_-\|hypothetical-protein	gnl\|CDD\|375438	pfam17936, Big_6, Bacterial Ig domain. This domain is found in a wide variety of extracellular bacterial proteins often in multiple tandem copies.	1.32844e-07
CP031113.1\|AXK08519.1\|622732_623413_-\|tellurite-resistance-TerB-family-protein	gnl\|CDD\|377342	pfam04391, DUF533, Protein of unknown function (DUF533). Some family members may be secreted or integral membrane proteins.	5.6465e-62
CP031113.1\|AXK08529.1\|637739_638690_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP031113.1\|AXK08516.1\|618505_619207_-\|DNA-binding-response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.05363e-90
CP031113.1\|AXK08515.1\|617081_618506_-\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	3.78414e-42
CP031113.1\|AXK08514.1\|614671_616012_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.21087e-123
CP031113.1\|AXK08526.1\|629704_630655_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.05216e-23
CP031113.1\|AXK08523.1\|627606_628407_-\|hydroxyacylglutathione-hydrolase	gnl\|CDD\|274569	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753). [Cellular processes, Detoxification].	2.85848e-146
CP031113.1\|AXK08525.1\|629240_629708_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	4.07937e-102
CP031113.1\|AXK08520.1\|623550_623943_+\|OsmC-family-peroxiredoxin	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	4.86152e-16
CP031113.1\|AXK08517.1\|620710_621661_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP031113.1\|AXK08512.1\|611802_612681_-\|septum-site-determining-protein-MinC	gnl\|CDD\|178806	PRK00030, minC, septum site-determining protein MinC.	3.47756e-166
CP031113.1\|AXK08518.1\|621729_622728_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	7.76869e-129
CP031113.1\|AXK08513.1\|612792_614556_-\|glutamine--tRNA-ligase	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
CP031113.1\|AXK08527.1\|632603_633482_-\|fatty-acid-desaturase	gnl\|CDD\|366126	pfam00487, FA_desaturase, Fatty acid desaturase.	2.20669e-12
CP031113.1\|AXK08521.1\|625306_626092_-\|enoyl-[acyl-carrier-protein]-reductase-FabI	gnl\|CDD\|180789	PRK06997, PRK06997, enoyl-[acyl-carrier-protein] reductase FabI.	1.22848e-177
CP031113.1\|AXK08524.1\|628427_629198_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.0439e-10
CP031113.1\|AXK08511.1\|610874_611690_-\|septum-site-determining-protein-MinD	gnl\|CDD\|225447	COG2894, MinD, Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning].	7.6448e-163

>CP031113.1|AXK08520.1|623550_623943_+|OsmC-family-peroxiredoxin
MTIQVRANTPGGLQYTATAEGHELPLAMPQPQGEGPDPHDYFDTALGGCKALTLMVYAQRKGLPLQAVDVDVVRDASEERKGIYRLTAKLKLHGDLDDAQIDELLKVADKCPLHKLMTATDIQVSTIVVE
>CP031113.1|AXK08519.1|622732_623413_-|tellurite-resistance-TerB-family-protein
MSARQLLDQLLQSGQSLMQGAGAQAQQATQGGKGTFLAGLGGGALGAGALGLLLGSKKARKIGGKVAMYGGMAALGALAYRAYDQYQRNQAGGAAAPAPQTLDRLPPAPAEQHSNAVLVAMIGAAKADGHIGPDERQLLETELAKLSGDAGDRAWLEAELARPLDPAVIAQQARTPEMGAEMYLASLLVADEQSFMERAYLDELARQLKLPAELKQQLEAQVPAAA
>CP031113.1|AXK08518.1|621729_622728_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MRPVAPMTTMKSQVSILLAGCLLGAGAAAAQAPATYPDHAITIVVTFPPGGGTDLLARKLGAAMQQRLGQPVVVENRPGASGNIGARAVAEARPDGYTLLMVNSSFAVNPGVFRNLDFSPTRDFTAVINVAYVPSVIVTAEPAGDAGLPERLRQADTQSRTLAFASCGNGTPQHLAGEMLRQASGAWLQHVPYRGCGPALTDVLSRQVPLGIVTASSAAPFIHAGKLRALAVTSAQRSPLLPDVPTVAEQGAPGYELDQWHGLLAPAGTPPAVIQRLYEALSAIVAEPAMRRELESLGFNPVSEGPERFEALVQADIARFAALTARMGLRAD
>CP031113.1|AXK08517.1|620710_621661_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031113.1|AXK08516.1|618505_619207_-|DNA-binding-response-regulator
MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARITRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYLGKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGEINLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQTVWGIGYRFSP
>CP031113.1|AXK08515.1|617081_618506_-|HAMP-domain-containing-protein
MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMEDVAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQEDEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAPSPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLADAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLSRMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERVGAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMAVLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQAPSGGLLVRITLPLAKA
>CP031113.1|AXK08514.1|614671_616012_+|cytochrome-ubiquinol-oxidase-subunit-I
MNIPPLLLARAQFTASLGFLALFLAISLALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMDKIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVLALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAEPELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLRLALGLGLLMLAASCATLALTCRRGFDPVALPRWWLRVLSLLMFAGALGVVATWCYDLAGMQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRKTGGSS
>CP031113.1|AXK08513.1|612792_614556_-|glutamine--tRNA-ligase
MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQGQPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVDAIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRGTLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRVRHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGKLARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSIRLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCSAPRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFTKDESGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHPDGGDKDFLACLNPNSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNRIVTLRDSWQAA
>CP031113.1|AXK08512.1|611802_612681_-|septum-site-determining-protein-MinC
MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFFENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTSVARAPQVIDTAPPNDVATPVPSVPEATAEATAKAGPQDDEADGEQADEAPAHNPESVPTRAARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNVHVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLDGDTLRIEALKG
>CP031113.1|AXK08511.1|610874_611690_-|septum-site-determining-protein-MinD
MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRNLDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEKVIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAKSRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASNQGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK
>CP031113.1|AXK08521.1|625306_626092_-|enoyl-[acyl-carrier-protein]-reductase-FabI
MGFLAGKRILMTGVLSNRSIAYGIARACRDQGADLAFTYVGDRFKERITEFAASFGSDIVLPCDVAEDSQIDAAFAELGKRWDGLDGLVHAIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPAMAKAALPLMEGRKGSVLTLSYLGSERVVANYNTMGLAKASLEASVRYLATALGPRGIRANAISAGPIKTLAASGIKDFSSILKFVEANAPLRRNVTIEDVGNVAAFMLSDLAAGITGEITHVDAGFSTVVPGMEN
>CP031113.1|AXK08522.1|626186_627596_-|LysM-peptidoglycan-binding-domain-containing-protein
MRFLRLLLPLFLAVLAGCAGTAKQNQAAGPSSNRYIAQDTSRTVDLTSPPSDAWDRIRRGFAIPNLNTDLAQEWTDYYASHPESVQRMAERAGKYLYFIVDEINRRGLPTELALLPFVESAYNPTALSRSQASGLWQFIPTTGQHFNLKQDWWRDERRDPIASTYAALDYLEKLFEMQGDWYLALASYNWGEGSVQRAMAKNEAAGLSTDYLSLNMPDETRNYVPKLQAIKNIIANPRKFAVVLPPVENTPYFVAVQKNRDIDIELAARLAEMPLDEFKALNPAFNRPLIRGEHAPTLLLPADRADRFNANLQNYKGDLSSWKVYHTRRGESYAAIAKRFGISEAKLRASNDIGSKRKVAADQALLIPGVPSGDGAANIQLASLSPPVGALDNVGEPRAAAAPRGKAPARVASARPNVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIPGTGTRG
>CP031113.1|AXK08523.1|627606_628407_-|hydroxyacylglutathione-hydrolase
MQTAPPLSAVVPLPAFSDNYIWALAHEGQAAVVDPGDAAPVLRWLRATGATLRAILLTHHHPDHVGGVLELVQATGATVYGPAGETLPHCDVRLAEGDRVTLPELALALEVLDVPGHTAGHIAYTGRAAGVERVLFCGDTLFAGGCGRLFEGTPAQMLDSLEKLSALPADTQVCCAHEYTLANLRWALAVEPANRTLQQWYQRAQELRNEGTPTLPSTIGQERETNPFLRTPHAAVAHAAAVWSGRSLATPVEVFAALRQWKNNFK
>CP031113.1|AXK08524.1|628427_629198_+|class-I-SAM-dependent-methyltransferase
MAEETPPIVELAEWFQTPPGQYVLAWEQAQFDEAVADIFGYYAWQVGLAEPNLLRANRMPFKAWVGAGVPPPELAQGWQACVAAAPEALPFESQSVDLLVLPHAFECAEAPHLVLREVERVLVPEGRVVISGFNPWSLWGARNLMPGMEAWLPLPLSAQVALPRLKDWFKLLSFEVERGRFGCYAPACRTDKWLRRWRFMERYGQRWWGLGGAVYVVTATKKVAAMRLIGPAWKTRRKRAQAASVVVNRQADDPGR
>CP031113.1|AXK08525.1|629240_629708_+|ribonuclease-HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQTTNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRTADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGMEAARGR
>CP031113.1|AXK08526.1|629704_630655_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP031113.1|AXK08527.1|632603_633482_-|fatty-acid-desaturase
MVRPAEWLRHRRDWQSVLYLAALPALAAWQWVHGWHWALYAPMLFLTLGVGVIHHNHAHRRMWRPRWLNRLTDFWLTLLQGHPTFVFHAAHNANHHRYKHGPRDVARTYRFGGDTNHLAGYLLHPLQAVVVLYPLFLASLRRLRSRRPGVWRYCLRQYAAWLGLWGGLLALDPGKAFWLVIVPQLHGLHWLLATNYLQHAHADGGPGRHAALSYARNFEGWVNPLLFNIGLHTAHHENPRAHWSELRALHWQHYRDRVPSRLNERGLAPYMARVFVLGLFSRRCRTHTLMRP
>CP031113.1|AXK08528.1|634408_637387_-|hypothetical-protein
MQLWLPDGTATSVRANAAGGFEASSAGDMTSGLIRARATDRYGDTSQEVTYAYTDTVDKTAPVLSIAGVATDEATGRVTVTGRSEPDAQVTIRFPGGGRKTVRADANGAYRVRSDGDLPAGVIVVQAADAAGNSTQAQQAYQDTVDRTAPEPVQIALDTDAATGRLTVSGQAEPGGSVTVTWPDGTTQTVRVDADGGFRVTSAGDAAQGDVVVVVADQAGNRAAPVRAHYADPVDRTAPMTPTVRHATDAQTGRVTVMGRTEAGALVTVQFPDGSSKTVRAQNDGGYAATSDTDMVSGPIVVSAGDADGNRTPAQQVMYTDTLDKTAPASPSLTVREDAASGRATVTGQAEPGAAVRVVFPNGEAQTVTAGSDGAYSVTSTADMVAGEITVVAADASGNQSAPARTVFADAVDKTAPAAPTLALSEAADSGRLTVSGRTEPGASVRVTFPDGETVTVTAKADGTYTATSRADMIGGNVTVVATDTAGNAAAPVRAAYADTVDRTPPVLDTPVLNVASDSGRVTVTGVTEPGARVQVAIPGESLQTVTADSAGRYRAVSPGDVLQSGTVRVIATDAHGNASAPRDVPYQDAVDRTAPPLTIEAAVEQARTGVVNVSGKTEPNLMVSATFPDGQTAQARADGQGRYQLASPADVARSGRIAVSASDAAGNRAAARAEFTDQVDKTAPAVTIRAVTEQAGTGVATVSGATEPGATVSVTFPDGQVARATADRSGAYTVHSARDVTARGNISVIATDAAGNASPSVSRQFSNTVADTVPPSLTIAMVTTDPGNGRITVSGVTEAGARVHVVFPGGASDTVTADSKGGYRATSAGDVGSGAVTAQATDASANRSPLKTYAYTDAWQPRQLSAKDFSQSRYFVPLTTRGGTDNEPLLRITTNQQIPTAELRVALKPYKTEDRAGRLVREAITLKWGNAPGVGGDARALHFYVPDSAKAKLRKELTEVERSNDYKFWIEFTDTRFGGVARLYIKVISTL
>CP031113.1|AXK08529.1|637739_638690_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHT
>CP031113.1|AXK08530.1|638686_639775_-|NAD-dependent-epimerase/dehydratase-family-protein
MTGSTAGKVLVVGALGVVGRAALEHFGQRPGLARVGLSRHAPDFAPEASWVSADLRDAQATRAALAAHGDATHVVYAALNEQPDLLKGWRDSGNVDLNTGMLRNTLDALREAPLRHVTLLQGTKAYGVHTGRPMPVPARETDAVRDHANFYFDQQDLLAERAAAQGFGWTIFRPQIVLGVALGSAMNPVATLGAYAALSREAGQPLRYPGHPHLLTECTDARLIARAIAWAWDEPRAHGEAFNIANGDVVLWQPVFERLAALFGMPLGEPVDTRMREAMPQLAERWRAIAERERLAVPELRDLIGLSWQYADATWAARHPLPVPPLVSTIKLRQAGFGDCIDTQDCIVEHLREMQRLRYLPR

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Crispr_ID: CP031113_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031113_3

1839838-1839965

Orphan

Consensus_repeat	Method
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031113_3

>merge|CP031113|3|1839838-1839965|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCGTGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGCAAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

>CP031113|3|3|1839838-1839965|CRISPRCasFinder
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCATAGCGGGCGCAGCG	TGGGGGCACTACTTTGCCGCTGGGCCGCCCCAAGGC
AAAAAGCCCCCTCGGGGGGCAGCAAGCCCGCGTAGCGGGCGCAGCG

Protein	Signature genes	Signature genes Name	Protein_function
CP031113.1\|AXK09495.1\|1831623_1832400_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
CP031113.1\|AXK09505.1\|1845043_1845556_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
CP031113.1\|AXK09503.1\|1842047_1844084_+\|UvrABC-system-protein-B	unknown	unknown	gnl\|CDD\|235395
CP031113.1\|AXK09499.1\|1836698_1836911_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270296
CP031113.1\|AXK09498.1\|1835949_1836681_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031113.1\|AXK09506.1\|1845573_1846785_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
CP031113.1\|AXK09510.1\|1848202_1850065_+\|Fe-S-protein-assembly-chaperone-HscA	unknown	unknown	gnl\|CDD\|235360
CP031113.1\|AXK09491.1\|1828747_1829203_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
CP031113.1\|AXK09502.1\|1840767_1841970_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
CP031113.1\|AXK09501.1\|1839988_1840717_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
CP031113.1\|AXK09508.1\|1847234_1847558_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
CP031113.1\|AXK09497.1\|1835273_1835915_+\|CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
CP031113.1\|AXK09504.1\|1844336_1844828_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
CP031113.1\|AXK09500.1\|1837480_1838431_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK09496.1\|1834564_1835281_+\|3-oxoacid-CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|131482
CP031113.1\|AXK09492.1\|1829216_1830020_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|223955
CP031113.1\|AXK09493.1\|1830016_1830448_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
CP031113.1\|AXK09509.1\|1847560_1848073_+\|co-chaperone-protein-HscB	unknown	unknown	gnl\|CDD\|235133
CP031113.1\|AXK09494.1\|1830444_1831602_+\|thiolase	unknown	unknown	gnl\|CDD\|180434
CP031113.1\|AXK09507.1\|1846822_1847233_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087

Protein	Function_ID	Function_description	E-value
CP031113.1\|AXK09495.1\|1831623_1832400_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	4.84544e-78
CP031113.1\|AXK09505.1\|1845043_1845556_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	1.00126e-77
CP031113.1\|AXK09503.1\|1842047_1844084_+\|UvrABC-system-protein-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP031113.1\|AXK09499.1\|1836698_1836911_+\|hypothetical-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	1.69368e-19
CP031113.1\|AXK09498.1\|1835949_1836681_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	8.17828e-106
CP031113.1\|AXK09506.1\|1845573_1846785_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
CP031113.1\|AXK09510.1\|1848202_1850065_+\|Fe-S-protein-assembly-chaperone-HscA	gnl\|CDD\|235360	PRK05183, hscA, chaperone protein HscA; Provisional.	0
CP031113.1\|AXK09491.1\|1828747_1829203_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.89129e-75
CP031113.1\|AXK09502.1\|1840767_1841970_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
CP031113.1\|AXK09501.1\|1839988_1840717_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	1.30999e-106
CP031113.1\|AXK09508.1\|1847234_1847558_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	4.04388e-54
CP031113.1\|AXK09497.1\|1835273_1835915_+\|CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	3.32577e-117
CP031113.1\|AXK09504.1\|1844336_1844828_+\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	1.04407e-74
CP031113.1\|AXK09500.1\|1837480_1838431_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP031113.1\|AXK09496.1\|1834564_1835281_+\|3-oxoacid-CoA-transferase-subunit-A	gnl\|CDD\|131482	TIGR02429, 3-oxoadipate_CoA-transferase_subunit_A, 3-oxoacid CoA-transferase, A subunit. Various members of this family are characterized as the A subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The B subunit represents a different clade in pfam01144, described by TIGR02428. The two are found in general as tandem genes and occasionally as a fusion.	2.11885e-141
CP031113.1\|AXK09492.1\|1829216_1830020_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|223955	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism].	1.56988e-63
CP031113.1\|AXK09493.1\|1830016_1830448_+\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	1.42164e-21
CP031113.1\|AXK09509.1\|1847560_1848073_+\|co-chaperone-protein-HscB	gnl\|CDD\|235133	PRK03578, hscB, Fe-S protein assembly co-chaperone HscB.	2.55481e-79
CP031113.1\|AXK09494.1\|1830444_1831602_+\|thiolase	gnl\|CDD\|180434	PRK06158, PRK06158, thiolase; Provisional.	0
CP031113.1\|AXK09507.1\|1846822_1847233_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	5.84746e-99

>CP031113.1|AXK09500.1|1837480_1838431_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031113.1|AXK09499.1|1836698_1836911_+|hypothetical-protein
MGPAGIPADITAAWAKEIARVAALPDVSEKLATLGVESVSSTPQQFSAFVESEIRKWEKVVQDAHIPPVQ
>CP031113.1|AXK09498.1|1835949_1836681_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKTKIKIVTLALCAFSSAVFASSFPSKPINLIVPYPPGGAVDPIALLYAEKISQSWGVPVIVLNRPGAGTTIGLNQAARAEPDGYTVVLGTASITSNAPLYRSLPYDTLKDFTYLSMAGMIPLAITANPRTAVNSMDELVGQLKKKPGSLTYSSSGNGTIIHLGGELFKSLAGVDMVHVPYKGSGPSVMAGVAGEVDLTFDSVFLMDPQVKAGKLKYIAVASEKRLKSLPEVPAIGESILVIS
>CP031113.1|AXK09497.1|1835273_1835915_+|CoA-transferase-subunit-B
MSKGWSNDEIAARIAVDLPEHAIVNLGIGLPILVANHIPEGKTIFFHSENGIIGLGPVPAPGQEDPDIVNAAKKHATLIAGASIVHHADSFSLIRGGRLDYSVLGGLQVSSGGDIANWKVPGQKGGGGVGGAMDLAVGARNVLVMMRHQDKTGASKLVKSCTFPLTAVSAVTRVYTELGIFECAGDAFIVRESAPGIGKDELLRKTEAALTFP
>CP031113.1|AXK09496.1|1834564_1835281_+|3-oxoacid-CoA-transferase-subunit-A
MTAGTSTHFNQVNGVGMLNKTCESADEAVSVVESGATILISGFGDIGLPFELLHALARTSVKDLTIVSNNAGTGELGLSRLFRNRQVSRLIASFPSQPDSHHYFAAYQEGLVDLELVPQGTLAERIRAAGAGLAGFFTPTGYGTELAQGKECRMFKGKGYVFEEALPGDFAFIKAHVADAYGNFRYRRASRTFNPIMAMAARTTIAEAKQMVPVGSIDPDDVHTPGVFVDRIVEVRDE
>CP031113.1|AXK09495.1|1831623_1832400_+|SDR-family-oxidoreductase
MQDKLLTLENRQVIVTGAGQGIGRALASAIAGLGGRVVAVDLNADALAALREALGHERCVTVAGNVADPSLAQQAVDAGVTAFGGVNGLVNNAGVTRTAMIDKMSISDWQQVIDVHLSGSFYFLQALGRHLLGRAKAGGDGAGAIVNISSDAGRRGTIGQINYGAAKAGVLGLTMCAAREWARYGIRTNTVGFGVVETPMTETIRGEKFRDTYLSQIPLGRWGEADEVVRPVCFLLSDADSYVTGQHLSVNGGYTIGL
>CP031113.1|AXK09494.1|1830444_1831602_+|thiolase
MIQERFPRGKTAIVACATYGIGESPGLSSLDLAVRASVQALDSVGLTPADVDGLFIGLPDDFVSGLSFTEYLGISPRLTDNNRTGGSSFLTHAIHAALALEAGLCDVALIAYGSNQRSGAGKLVSSMRPSPYEGAYKLARPVGAYALAASRYAAQYGLQKEQLGAVALAARQWAQKNPEAYMRAPLTMDECLASRLVCDPFSVRDCCLVTDGAAAVVMVRADRARDLAARPAYLLGGAAAAWHKDITNMPDLTVTAASLSGPRAMAQAGVTPADIDVLELYDAFTLNTILFLEDLGFCAKGEGGAFVEDGRIAPGGALPVNTNGGGLSCVHPGMYGLFTMVEAAQQLAGAAGERQVAQARLALAHGNGGELSSQATLILGTEETI
>CP031113.1|AXK09493.1|1830016_1830448_+|hypothetical-protein
MTEHPQAASALLPQQEYFAHLADGRFMIQRSRSSGEYVFYPRVAAPRTGAQDLEWVAASGRGTVYATTVMRVRPPAAPYNVCLVELEEGPRMMSRVEGIGPEDVQVGMAVRARIIRDDAGEPLVVFEPAGPSDAGIGQGRAAQ
>CP031113.1|AXK09492.1|1829216_1830020_+|enoyl-CoA-hydratase/isomerase-family-protein
MIMSVLEISRVGACAVLTLNRPAARNALDMDLRNALAKALPEIRDDATVRAVVLTGAGGHFCAGGDIRAIAAGQGNADVFEGRNRILSMQRWFDGLVDLEKPVIAAVDGVAFGAGLSLALAADFVLASPRATFCAVFARLGYVPDLGGMYLLPRAVGLARAKALAFSARVVGAPEALEMGIAHQLVDDRPVLDAALELAGRFEQAPAGALGIVKSVMNHAFESDRRTVYMQEALAQALCRESAFHQEAARRFLDKQAPLYQWPQEQQ
>CP031113.1|AXK09491.1|1828747_1829203_+|MaoC-family-dehydratase
MSFDSIAALKAFAGQPAAVGQPIVVDQSAIDTFGDVVHDRQWIHVDPVRAAAESPFGTTIAHGLLTLSLITGWYHQLFEFPGRKLALNYGFDKVRFPAPVPSGSALVGSFRLARVDELGPDEARCLWEVDVRVAGAERPAMVAEWLMQLRY
>CP031113.1|AXK09501.1|1839988_1840717_-|transcriptional-repressor-LexA
MRLAFFPWVLQNGAVYPYSPQKRVIAMATKLTERQQEILDLIRQTVARTGFPPTRAEIAQALGFRSPNAAEDHLKALARKGAIELTAGASRGIRLKVPDSATPSAQLTHPLLAQLVLPLVGRVAAGSPILASEHVEREVGVDPGLFAQTPDYLLKVRGMSMRDAGILEGDLLAVKRAAEARNGQIVVARLGDEVTVKRLQRQNGRIELLPENPDFAPIVVANTDEFALEGIAVGLIRTQPLH
>CP031113.1|AXK09502.1|1840767_1841970_-|aspartate/tyrosine/aromatic-aminotransferase
MSTLFASVELAPRDPILGLNEQYNADTRPGKVNLGVGVYYDDEGRIPLLQAVRKAEVARIEAAAARGYLPIEGIAGYNKGAQALLLGADSPLAAEGRVLTAQALGGTGALKIGADFLRQLLPQSKVLISDPSWENHRALFERAGFPVETYAYYDAATHGLNFEAMLAALQAAPEQTIVVLHACCHNPTGVDPTPQQWEQIAAVVKARNLVPFLDIAYQGFGEGLEQDAAVVRMFAELDLTMFISSSFSKSFSLYGERVGALTVVAGSKDEAARVLSQLKRVIRTNYSNPPTHGGTVVSTVLNTPELFALWENELAGMRDRIRLMRKELVEKIKTQGVAQDFSFVLAQRGMFSYSGLTAAQVDRLREEHGIYAVSSGRICVAALNSRNIDAVAAGIAAVLK
>CP031113.1|AXK09503.1|1842047_1844084_+|UvrABC-system-protein-B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVTGSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGTVSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRGVFRVRCETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRFTVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVFVSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKRAALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKAVRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNLEFEQAAAARDALNALKSRLLLDGVGWSG
>CP031113.1|AXK09504.1|1844336_1844828_+|low-molecular-weight-phosphotyrosine-protein-phosphatase
MMTKVLFVCMGNICRSPSAEGVFRYLVNDAGMGDVVRVDSAGTHAFHIGEAPDARAQAAARKRGYDLTHCAARQVTADDFREFDLILAMDWDNLAALQQQCPKAYQHKLMLLMRFANEFEEATVPDPYYGGPEGFGKVLDYLEDACQGVLELVRKRATQYQAA
>CP031113.1|AXK09505.1|1845043_1845556_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MRLTTKGRFAVTAMIDLAMRQHSGPVTLAAISQRQNISLSYLEQLFGKLRRHELVDSVRGPGGGYSLARLARNVTVADIIFAVDEPLDATSCGGKRDCTSGNDGKPGKCMTHELWTTLNRKMVDYLDSVSLQDLVDQQRVRQLQEAANQAQGCSAVRVNRSTPVAANATA
>CP031113.1|AXK09506.1|1845573_1846785_+|IscS-subfamily-cysteine-desulfurase
MSNRPIYLDYSATTPVDPSVVEKMIPWLYESFGNPASRSHAFGWEAEDAVEKAREEVAKLVNADPREIVWTSGATESDNLAIKGAANFYAERGKHIITVKTEHKAVLDTCRELERQGFEVTYLDVQDDGLLSLDAFKAALRPDTILVSVMMVNNEIGVIQDIAALGEICREKGIIFHVDAAQATGKVEIDLQKLKVDLMSFSAHKTYGPKGIGALYVRRKPRVRIEAQMHGGGHERGFRSGTLATHQIVGMGEAFRLAREEMGTENERVRMLRDRLLAGLTQIEEVYVNGSMEHRVPHNLNISFNYVEGESLIMAIKELAVSSGSACTSASLEPSYVLRALGRNDELAHSSIRFTLGRFTTEQEIDFTIELIKSRVGKLRDMSPLWEMAQEGIDLNSVQWAAH
>CP031113.1|AXK09507.1|1846822_1847233_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSSKVLDHYENPRNVGSFDKGDDSVGTGMVGAPACGDVMKLQIKVNEAGVIEDARFKTYGCGSAIASSSLVTEWVKGKTLDEAMNIRNTQIAEELALPPVKIHCSILAEDAIKAAVQDYKTKHGAETPEAVAAN
>CP031113.1|AXK09508.1|1847234_1847558_+|iron-sulfur-cluster-assembly-protein-IscA
MAVTLTQSAANHVGRYLQKRGKGIGLRLGVRTTGCSGMAYKLEYVDEQAADDVVFDSFGVKVFIDPKSLAYLDGTELDYAREGLNEGFRFSNPNEKATCGCGESFTV
>CP031113.1|AXK09509.1|1847560_1848073_+|co-chaperone-protein-HscB
MAADDHFSLFGLPTRFALDPVQLEQAWRAVAARVHPDRYATASAAERRVAMQWAARANEAYRQLRDPMLRARYLCEQAGVDLQTESNTAMDPAFLMQQMEWREMLDDARRDPAAFAALRAELEQARLRMQQTLSELIDERGDYQQAGTKVREWMFVEKLAQELSAAQPMQ
>CP031113.1|AXK09510.1|1848202_1850065_+|Fe-S-protein-assembly-chaperone-HscA
MALLQISEPGDSPAPHQRKLAVGIDLGTTNSLVAAVRSSVPEVLADAQGQVLLPSAVRYLDGGAVRIGREALLEQARDPLNTIVSVKRFMGRSAADAAASGAPYEFVDAPGMVRLRTVQGDLSPVEVSAQILAVLRQRAEDVLGDDLVGAVITVPAYFDDAQRQATRDAARLAGLNVLRLLNEPTAAAIAYGLDQAAEGIYAVYDLGGGTFDISILRLTQGVFEVIATGGDTALGGDDFDSAIVAHACAGEDVAALPVADRRALLVAARAAREALTDQAQAPFEVTLRDGRAIQATLTRAQFEQLAEPLVGRTLDSARRALRDAGLAVGDVRGVVMVGGATRMPVVRQQVGALFGTEPLTNLDPDQVVALGAALQANLLAGNRALGEDWLLLDVIPLSLGLETMGGLVERIIPRNSTIPVARAQEFTTFKDGQTAMSVHVVQGERDLVSDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLSVTAREQSTGVEAAVAVKPSYGLSDDEIARMLADSVTQADSDARARMLREQQVEARQLVESVGAALAADGDLLDPAERATVDQRLQAAAQAQSLDDVEAVRAAVQALSDATEEFAARRMDRSIRSALAGRKLDELA

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Crispr_ID: CP031113_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031113_4

2909452-2909568

Orphan

Consensus_repeat	Method
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031113_4

>merge|CP031113|4|2909452-2909568|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAAGGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGTTTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

>CP031113|4|4|2909452-2909568|CRISPRCasFinder
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA	GGCCCCCACGCTGCGCCCGCTGTGCGGGCTTGCTGCCCCCCAAGGGGGT
TTTTTTGCCTTGGGGCGGCCCGGCGGCAAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031113.1\|AXK10350.1\|2901322_2903119_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|225212
CP031113.1\|AXK10361.1\|2922251_2922554_+\|hypothetical-protein	unknown	unknown	unknown
CP031113.1\|AXK10360.1\|2920688_2922209_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
CP031113.1\|AXK11544.1\|2916989_2918690_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
CP031113.1\|AXK10355.1\|2914052_2914748_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	unknown	unknown	gnl\|CDD\|213222
CP031113.1\|AXK10357.1\|2916030_2917008_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226706
CP031113.1\|AXK10347.1\|2898817_2899372_-\|transcription-elongation-factor-GreB	unknown	unknown	gnl\|CDD\|179345
CP031113.1\|AXK10346.1\|2897820_2898771_+\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK10345.1\|2897089_2897722_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|339870
CP031113.1\|AXK10356.1\|2914740_2916021_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274034
CP031113.1\|AXK10353.1\|2909679_2912910_-\|autotransporter-SphB3	unknown	unknown	gnl\|CDD\|377133
CP031113.1\|AXK10344.1\|2894642_2896925_+\|NADP-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|235976
CP031113.1\|AXK10348.1\|2899439_2900285_-\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
CP031113.1\|AXK10354.1\|2913191_2914019_-\|TatD-family-deoxyribonuclease	unknown	unknown	gnl\|CDD\|238635
CP031113.1\|AXK10358.1\|2918792_2919897_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
CP031113.1\|AXK10351.1\|2905017_2908944_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|378762
CP031113.1\|AXK10349.1\|2900354_2901323_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
CP031113.1\|AXK10343.1\|2891791_2894488_+\|alpha-ketoglutarate-dehydrogenase	unknown	unknown	gnl\|CDD\|237267
CP031113.1\|AXK10352.1\|2909234_2909411_-\|hypothetical-protein	unknown	unknown	unknown
CP031113.1\|AXK10359.1\|2919926_2920682_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180796

Protein	Function_ID	Function_description	E-value
CP031113.1\|AXK10350.1\|2901322_2903119_-\|IS481-family-transposase	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	2.40146e-57
CP031113.1\|AXK10360.1\|2920688_2922209_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
CP031113.1\|AXK11544.1\|2916989_2918690_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
CP031113.1\|AXK10355.1\|2914052_2914748_-\|lipoprotein-releasing-system-ATP-binding-protein-LolD	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.7791e-114
CP031113.1\|AXK10357.1\|2916030_2917008_+\|hypothetical-protein	gnl\|CDD\|226706	COG4255, COG4255, Uncharacterized protein conserved in bacteria [Function unknown].	1.08896e-20
CP031113.1\|AXK10347.1\|2898817_2899372_-\|transcription-elongation-factor-GreB	gnl\|CDD\|179345	PRK01885, greB, transcription elongation factor GreB; Reviewed.	4.04513e-99
CP031113.1\|AXK10346.1\|2897820_2898771_+\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.66858e-23
CP031113.1\|AXK10345.1\|2897089_2897722_+\|fimbrial-protein	gnl\|CDD\|339870	pfam16970, FimA, Type-1 fimbrial protein, A. FimA is a family of Gram-negative fimbrial component A proteins that form part of the pili. There are usually up to 1000 copies of this subunit in one pilus that form a helically wound rod onto which the tip fibrillum (FimF.FimG, FimH) is attached. Pilus subunits are translocated from the cytoplasm to the periplasm via the general secretory pathway SecYEG.	3.93152e-22
CP031113.1\|AXK10356.1\|2914740_2916021_-\|lipoprotein-releasing-ABC-transporter-permease-subunit	gnl\|CDD\|274034	TIGR02212, releasing_system_transmembrane_protein_lolC., lipoprotein releasing system, transmembrane protein, LolC/E family. This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking].	6.22467e-159
CP031113.1\|AXK10353.1\|2909679_2912910_-\|autotransporter-SphB3	gnl\|CDD\|377133	pfam03797, Autotransporter, Autotransporter beta-domain. Secretion of protein products occurs by a number of different pathways in bacteria. One of these pathways known as the type V pathway was first described for the IgA1 protease. The protein component that mediates secretion through the outer membrane is contained within the secreted protein itself, hence the proteins secreted in this way are called autotransporters. This family corresponds to the presumed integral membrane beta-barrel domain that transports the protein. This domain is found at the C-terminus of the proteins it occurs in. The N-terminus contains the variable passenger domain that is translocated across the membrane. Once the passenger domain is exported it is cleaved auto-catalytically in some proteins, in others a different protease is used and in some cases no cleavage occurs.	3.21051e-45
CP031113.1\|AXK10344.1\|2894642_2896925_+\|NADP-dependent-malic-enzyme	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
CP031113.1\|AXK10348.1\|2899439_2900285_-\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	1.79612e-72
CP031113.1\|AXK10358.1\|2918792_2919897_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
CP031113.1\|AXK10351.1\|2905017_2908944_-\|inverse-autotransporter-beta-barrel-domain-containing-protein	gnl\|CDD\|378762	pfam11924, IAT_beta, Inverse autotransporter, beta-domain. This is a family of beta-barrel porin-like outer membrane proteins from enteropathogenic Gram-negative bacteria. Intimins and invasins are virulence factors produced by pathogenic Gram-negative bacteria. They carry C-terminal extracellular passenger domains that are involved in adhesion to host cells and N-terminal beta domains that are embedded in the outer membrane. This family represents the beta-barrel porin-like domain in the outer membrane that can be found in intimins, invasins and some inverse autotransporters.	8.97198e-85
CP031113.1\|AXK10354.1\|2913191_2914019_-\|TatD-family-deoxyribonuclease	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	1.42767e-89
CP031113.1\|AXK10343.1\|2891791_2894488_+\|alpha-ketoglutarate-dehydrogenase	gnl\|CDD\|237267	PRK13012, PRK13012, 2-oxoacid dehydrogenase subunit E1; Provisional.	0
CP031113.1\|AXK10349.1\|2900354_2901323_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.0858e-13
CP031113.1\|AXK10359.1\|2919926_2920682_+\|SDR-family-oxidoreductase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	5.47641e-103

>CP031113.1|AXK10352.1|2909234_2909411_-|hypothetical-protein
MGAFCLFEECVAGIASRHPQWADVALPGDIQAEVLPRAPLPVHGAPAARYPGLFDVPD
>CP031113.1|AXK10351.1|2905017_2908944_-|inverse-autotransporter-beta-barrel-domain-containing-protein
MNKNIYRVVWSLVRGAWVVAGEWARAGRKSSSPRRQNRQRARRGVAAMVGGSILAQALLPLSALAQGAPTLRPARVAQEEAGQDAAWTRKLAAQAESLARRQAERQPGARVDGDYLKREAQAQVNDVLRDGVNLARESGLPFLRNLQGGLSHDFESGRTSLQLNTIDEVYRAGRNTGLLQLGAHNQNDRPTANAGAVYRREVNDALMVGANGFLDYEFGKQHLRGSVGLEVIAPEFSLYGNVYAPLSDWKGAKRNNRREEKPASGMDVGVGYRPAFAPGLSLSATHFRWNGAEVDYFDNGRTQAGAKGFKVGVEYRPVSLVSVGLEQTKVIGGGRETRMQLGLNINLSEPLSKQLRRDASGTPAFSPDARRHALVERENRIVLNTRRKEIILPLVVSKVSTLQADGRVTVIGATQPFATVTVRMPDGMTGTATADASGRFAYTSAGDQPSGVLALRARNAEGDSSREVTYRYVDEVVLGDLQVAVMALVPLPADRALEVRGKTEPKVDVKVSFSNGESVLAKADAKGLFTVRSTRKVTQGKVLVQATHPQTRKEARAVADYLPPATLAPTIDAVTAQADTGRVTVTGQAEPGAQVDVHFPDGTAKTVDAGADGAYAATSDGDMVSGDIHAQATDKAGNQSPEATRHYGDTTDITPPAAPTIANVATDATSGRVTAAGMAEPGANVTVNFPDGTRKTVVAGGDGAYTATSDRDMVSGDIRVQATDKAGNQSPEATRAYADAVDRTAPEVPTVTHVATDAKSGRITVTGMAEPGANVTVNFPDGTRKTAVAGGDGAYTATSDGDMVSGDIRVQATDKAGNRSPEATRAYADTVDTTPPAVPTITDVTTDATNGRITVTGVAEPGANVTVDFPDGTRKTVVAGGDGAYTATSDRDMASGDVRVQAIDKGGNRSPEATRAYADTVDKTAPAAPTITNVTTDAASGRITVTGMAEPGANVAVNFPDGTRKTVVADGAGAYAADSDGDMVAGDIHVQATDKAGNRSPEGTRAYVDTVDKTPSAAPTIVRVTTDRSSGVVTVAGTADPDNDVTVQFPDGGRKTVKAGKDGSYSVTSDNDIFSGIIQVSARNPAGNASPEVRQDYRDEFVPANAITNIETNSRNGIVTVSGKTSPDATVVVSFPGGDEARTRAKGDGTFSVSSPMDIPRGVVSLSTEVNGVQTVVATRTYEDKFTKGGLDFTAFLPYTPKFNGVSTSDTSAVLLSIPRYFYSGGAPVAKIMPPEADGSEFAKRAAAAMRAQVTPGRDSSEYDVRVSWPAGTFTPADVGQRADLAVKVFDKGTGKYMLLLAPVNFPY
>CP031113.1|AXK10350.1|2901322_2903119_-|IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHSYWTLTALDVGQGGAVVLETARHVLLFDTGPRHGDASDAGERVIAPFLWARGYRHIDTLVVSHADLDHTGGLRSVLAALPVGQAYASFDLAAWLARQARVRPDGWRAAPRMPPATRGCEAGVQWRVDGVRLRFVYPPSLAAPLPWRSSNARSCVLLVEGVGHRALLTGDVGLVQEAAFAAALPPVDLVMAPHHGSAMSSGSLLTAATRPAHAIAQAGYLNRFGHPAASAINRWRRAGAAVWRTDLDGAVRADSTPRGLFASGQRQVARRYWRDSRAGPDAPLR
>CP031113.1|AXK10349.1|2900354_2901323_-|alpha/beta-hydrolase
MGHRRPSGPRRGDIMQEPRLDFVTCASPTGFHRMAYWEWGDPLNDRVLVCVHGLTRTGRDFDHLARRLAGQWRVVCPDVAGRGKSDWLSNPALYAVPQYVSDMATLIARVWPATLAWVGTSMGGLIGLGLAGAATMMRLARAMRPRPDGLPAQADDLRLHRLVLNDVGPRLNVEVLQRIAGNVAAQDSYSTFEAAVAAMRQISTTFGPHTDAQWDELARHIYVRQGGGWVRHFDPALAVPLGAQVAQAFEAGERILWQAYDSLDCPVLIVRGQDSDLLSAATAGEMLARNPRARLHEVPGVGHAPTLMTPEQIEPIARFLQE
>CP031113.1|AXK10348.1|2899439_2900285_-|PHP-domain-containing-protein
MNIAAPNVDLHCHSTVSDGSMPPAAVARRAHANGVDVWALTDHDEIGGVAEAAQAAAALGMRFVAGVEISVTWAGLTVHIVGLRVDPANEALVQGLRDTRAGRAARAVQIGERLAGLGMPGAYEGALPFAGNPELISRTHFARFLVEAGYCPDVQTVFNKYLGDDCPGHVPMQWASLAEAVGWIRGAGGCAVIAHPGRYKYSPMQFDALYDEFLQLGGTGIEVVTGSHTSEEARRYAEVARRHGFLASRGSDFHSPTESRVDLGRLPPLPPDLKPVWHDWF
>CP031113.1|AXK10347.1|2898817_2899372_-|transcription-elongation-factor-GreB
MNKAFVKESDRDDEDDLPEAQALPAGTRNYMTPQGYARLRDELSHLMNVERPSVVQVVSWAASNGDRSENGDYLYGKKRLREIDRRMRFLTKRLDIAEVVDPAAQPNRDQVFFGATVLYMDRAGEERTVTIVGVDEAEPLAGKISWISPVARALTKAHEGDTVTLRTPGGVEELEILEVRYPDA
>CP031113.1|AXK10346.1|2897820_2898771_+|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDEYNLLTVHS
>CP031113.1|AXK10345.1|2897089_2897722_+|fimbrial-protein
MLPMQIPFQRALRLCLRAALAAIASAAHADDGTIVITGTITDTTCVIEDPSGPNHTKVVQLPKISKNALKANGDQAGRTPFIIKLKDCPSSLGNGVKAYFEPGPTTDYSTGDLRAYKMVYATNPQTQLSNITAATEAQGVQVRISNLNDSKITMGANEATQQAAGFDPEVQTGGTSRTVTMRYLASYVKKNGDVEASAITTYVGFSVVYP
>CP031113.1|AXK10344.1|2894642_2896925_+|NADP-dependent-malic-enzyme
MDENLTKLALDYHAYPTPGKISVTPTKTLANQDDLSLAYSPGVAAACMAIFDQGNDAASKYTSRSNLVGVITNGTAVLGLGNIGSLAAKPVMEGKGCLFKKFAGIDVFDIELAENDPDKLVDIIAALEPTLGGVNLEDIKAPECFYIEKKLRERMNIPVFHDDQHGTAIISSAAILNGLKVVGKDIGQVKLACSGAGAAAIACLDLLVHLGIKREHIYVVDSRGVIWEGRDENMEPNKRRYAQKTEARTLADVVNGADVFLGCSTAGVLTPEMVKTMAAQPLILALANPEPEIRPELAKAARPDCIVATGRSDYPNQVNNVLCFPFIFRGALDAGATRITEEMKLACVKAIAELAQAEQNDEVARAYAGQELSFGPDYIIPKPFDPRLIVQIAPAVAQAAADSGVATRPIEDIEAYRQKLMGFVYHSGQLMRPLFQQAKQAPKRVVYADGEDERVLRAVQTVIDEKLAEPILVGRPSVIEMRIKKFGLRMVPGQNVEIVDPEDDSRFNDTWNGYYQLRGREGVTPAIAKAMIRKHNTLIGAMLLRRGDADALLCGVASKYDNQLKYVEEVIGRKPGQTYGALNVLMLPNQTLFVTDTHVNENPSADEIANITIQAAEEMLRFGVMPKIALLSHSNFGSRPTDSSRKMAHARKLVAERAPHLEVDGEMHADAALSESIRLQAYPDSTLKGRANLLVMPNLDTGNITYNMLKMTGSNGIAMGPILLGSARPVHILTTSATVRRIVNMTALAVVDAQQEAAEG
>CP031113.1|AXK10343.1|2891791_2894488_+|alpha-ketoglutarate-dehydrogenase
MCNAQAGATPPQIPDPDPVETAEWCEALDSLTQAGGPERAAYVLQQLLARATALGVRAPGITRTAYLNTIAADQEPPFPGNLSLEERIASINRWNALAMVVRANQAHGELGGHIASYASAADLFEVGFNHFFRAPAPGFGGDLVYMQPHSAPGIYARAYLEGFLNDVDLAHFRQEITAGAQGLRGLSSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLEHRSLAMPSDRKVWGIFGDGEMDEPESIAALTLAARERLDNLVFVINCNLQRLDGPVRGNGRIIDELETLYAGAGWNVIKLVWGGDWDALLRRDPDGVLAGTFSHTVDGQFQTFAANDGAYNRQHFFGQDPRLSALVADWSDEAIDRLRRGGHDMVKIHAAYHRATHHRGQPTVILAQTKKGFGMGTAGQGKMTTHQQKKLDDEALLAFRDRFALPISDADCLALKFYKPAEDSAELRYLESRRAALGGYLPRRRTEAPRLAPPPVADWARFALQAAGKEMSSTMAIVRMLTALLKDPQLGPRIVPIVADEARTFGMANLFRQVGIYSAQGQLYEPEDIGSVLAYREARDGQILEEGITEAGAISSWTAAGTSYSVNGLPMLPFYIYYSMFGFQRIGDLIWAAADQRTRGFLIGATSGRTTLGGEGLQHQDGYSHLAAAAVPNCRAYDPAYAYEVAVLVEHGMQRMLDEQCDEFYYLTVTNENLAQPDMPEGEETRTGILRGMHRVRAADATPQVRLLGAGPMLDEAMRAAQLLRDEHGLDAEVWSVTSFSELARGGRGAERAQALGLPCPDGNWLAQCLGDQATPVVAVSDYVRAVPEQIRAWVPGPYRVLGTDGFGHSDTRARLRDFFEVGAPWIVLHALDLLAREDSAWQPALQARREQLQAATRNVPSWQS
>CP031113.1|AXK10353.1|2909679_2912910_-|autotransporter-SphB3
MAQASARGMGLRITSLAAALLGVYGAAGAAENRLECIGACPPGQPVAGAHYSGTNLSANREWVVYGEGSNAVFTLQGGSVTASGGLMGAVNAADGARVYLNQVSVRTDAGNGWEAPGVRAEYGALVNVRGGSIATVGGGSYGVQSLDSGTMIELNGTDIRTTDAYSDGLRAEFGGSIRAVGLTINTTGEHAVGAMGADDGTIALRDSRITTSGVDAYGLGTESQVLSPGGVLQVSNTAIQTSGKNAHGVYLQGGSSLNMSGGSIRTTGSGAAGLRVSNGSSVALNGVEVVASGPSLLSTLSATRQQSIVVGAGSNLTRNDGRLLLVRRVAGGELGQVTLTLKSGSYAAGNIENLAADGSRESSALTIVDVQSGAQWAGLVIDDTTAIVNGSQSGQHSGFSTAGDMVLEGGSAPVTFTGVSNIGGSSSLGAGSQTTFGGATTIGQSLAVLPGGSVAFNGPLTIGESVTEGQGTALSFNAPAIIGANVQGAGGAAFTFSGPAQVGGSVQGLDGASFRFSTSAPTAIAGGLSLAGGSSLGGGSPTTPIVVIGGADAVSGAILGGNLDIGGALRMTGASLAPGNSIGTVTVGSVGALSGSTYLAEVNAKGQSDLLVVRSGNVDLAGVSLVVGQENGTGGYVLNHDYTIIKTEAGKIVGEFAAASLDESLASTLVKLDPVKYGAQATQVSLSPDADKLAAARAGLIRNQSAVLDGALSVAGRNASADAVMLMSDTGQRADALDQLSGEVHGSAVSALYSNTQLLNRTVARRMSANLGAGLLAGAPTAQAAGPAAASAMPGTAAYPLWADVVDNWSSFDAKDNAAKAKSNTAGLFIGGDAAVGAGWRVGGALGFTDGRIKADAVDSRSDVTSYTAALYGGNSWAAGKGKLNFLAGVGYTHHDIDSRRSVDVGGAQTLKADYKANTTQLFAELGYQVPVGASSSVEPYAGLAWFNNHSDSFDEDGGPAALHGSGQTDQITTFTLGLRGNTALQLGATETRLSAGLGWRHANGDVDATRKLAFIQGGGTAFTVAGSPVAREAAVLDLAAEVDVGRNAALGLAYGGQFGNGNKENTGSLYLKVRF
>CP031113.1|AXK10354.1|2913191_2914019_-|TatD-family-deoxyribonuclease
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLAHAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLDFFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRRRPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADIGLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVARATTTTALRVLPRLGALLQDRAATP
>CP031113.1|AXK10355.1|2914052_2914748_-|lipoprotein-releasing-system-ATP-binding-protein-LolD
MTEPNDTGPALQAEHLGKVYDEGPARIEVLSDVSLSVARGEMVAIVGASGSGKSTLLHILGLLDVPSSGTVSVDGVPAAGLSEKRKSALRNRSLGFVYQFHHLLPEFSALDNVAMPLIVRRENRDRARAQAREVLELVGLAAREEHFPGQLSGGERQRVALARALVTRPACVLADEPTGNLDRHTAHNMFELLTRVNRESGTAFVIVTHDPELAARADRQLHMENGRLQPD
>CP031113.1|AXK10356.1|2914740_2916021_-|lipoprotein-releasing-ABC-transporter-permease-subunit
MLKIPYELWIGARYAGMARIRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTAGVRLRVADMQRAPEVAAELTKVLPPYVMAADWSRNNRTWFAAVQTEKRMMFLILALIVAVAAFNLLSSLVMAVKDKQSDIAILRTLGAGPGEVARIFLVQGALIGVVGTLLGVAGGIAIAYNVDVIVPFIERLLGVQFLPREVYFISALPSDPQADDIITIGLTSLVLSLLATLYPSWRASRLQPAQVLRHD
>CP031113.1|AXK10357.1|2916030_2917008_+|hypothetical-protein
MALTGTRTTIAAMLIVIPGALPAAAVAPELARLLPQHAPTLHGWLQAASARVQAFDAARQGCTPFEGWQLEQAGYQPQPGLPLGAGLGPLRAAGGTPGQPVWLADLAHLMLGADQAALLDPALLDLRADESAQLFEAAAPLFADSGFGATPIDAARWRLTLPAGMAPQTASPAAVAGQRLRAWWTQDVAMRPWRRLLNEIQMVWYEHPVNEARAARGAAPINALWLYGGATPWPAGAPAPARVCDELAATQRAGDWAAWLDALAMLDAAQLAPLAGPHGRPVQPLQLLLLGDDRRAALTLKPRAGLARWLPAPKHNWNAWWSRPV
>CP031113.1|AXK11544.1|2916989_2918690_+|single-stranded-DNA-specific-exonuclease-RecJ
MVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVIHPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGATACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIIITVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGFGSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVADVVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFALGPRINAAGRLADMSLGIACLTTDDEAQTLEMARELDNINRERRTIEAEMRDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFAPAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGSGDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQVWGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLPERIQAAYRLEQNIWNGMVSVQLVIEHAA
>CP031113.1|AXK10358.1|2918792_2919897_+|peptide-chain-release-factor-2
MEAERQNQLVARLEDYAEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEVDESFEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLEDSKTDVGWGHQIRSYVLDQSRIKDLRTNVEISNTQKVLDGDLDPFIQASLKQGV
>CP031113.1|AXK10359.1|2919926_2920682_+|SDR-family-oxidoreductase
MTDTVAILTGASRGLGAALARGLLAPGTRLITLARRADPDLEAAARTRGASLEQVQVDLSDPAAAGAAAKRLCAALPRDARRYLLINNAGTVSPVAQAAGLTDGAAIAGALNLNVTAVVLLTARFVAALQGLPADRRVLNISSGAGRNPNAGWGVYCAAKAALDMYSRVLKQEQGQDGVRVVALAPGIVDTDMQGAIRASDPADFPALERFREFHATGKLSAPADVAARILAYLDRDDFGTTEIDDIRNYQ
>CP031113.1|AXK10360.1|2920688_2922209_+|lysine--tRNA-ligase
MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGKASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELYLKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQPFDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSPLARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGIDRLVMLLTDSPSIRDVILFPHLRRED
>CP031113.1|AXK10361.1|2922251_2922554_+|hypothetical-protein
MAALAYLLLSRRARPAAAPRPLRALPAGRRRMPLYLGVAAVLALAGALLSAFLLVTAMAGGSGGGYRGQADFLQQVAIVLLAIGVVCAIAALVSFFRQRG

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Crispr_ID: CP031113_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031113_5

3626255-3626348

Orphan

Consensus_repeat	Method
GTGCCTGTCCCGGCGGGGACAGGCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031113_5

>merge|CP031113|5|3626255-3626348|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCACGCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGGGTGCCTGTCCCGGCGGGGACAGGCAC

>CP031113|5|5|3626255-3626348|CRISPRCasFinder
GTGCCTGTCCCGGCGGGGACAGGCAC	GCCCGCACAGCGGGCGCAGCGTGGGGGTTTTCCTGGGCCCGG
GTGCCTGTCCCGGCGGGGACAGGCAC

Protein	Signature genes	Signature genes Name	Protein_function
CP031113.1\|AXK10951.1\|3625264_3625609_+\|TIGR01244-family-phosphatase	unknown	unknown	gnl\|CDD\|225984
CP031113.1\|AXK10954.1\|3627108_3628059_-\|IS481-like-element-IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
CP031113.1\|AXK10959.1\|3632362_3633523_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173849
CP031113.1\|AXK10955.1\|3628156_3629104_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
CP031113.1\|AXK10950.1\|3621457_3621976_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
CP031113.1\|AXK10949.1\|3620591_3621347_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
CP031113.1\|AXK10952.1\|3625697_3626168_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
CP031113.1\|AXK10953.1\|3626578_3626977_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|234569
CP031113.1\|AXK11574.1\|3623764_3625165_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
CP031113.1\|AXK10960.1\|3633533_3633926_-\|acyl-dehydratase	unknown	unknown	gnl\|CDD\|239525
CP031113.1\|AXK10947.1\|3618385_3619171_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|181723
CP031113.1\|AXK10956.1\|3629310_3630201_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176107
CP031113.1\|AXK10945.1\|3616359_3617337_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176106
CP031113.1\|AXK10957.1\|3630197_3631346_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP031113.1\|AXK10944.1\|3615061_3616234_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
CP031113.1\|AXK10961.1\|3633922_3634318_-\|hypothetical-protein	unknown	unknown	unknown
CP031113.1\|AXK10946.1\|3617347_3618319_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
CP031113.1\|AXK10958.1\|3631353_3632325_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270296
CP031113.1\|AXK10948.1\|3619163_3620396_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|367110
CP031113.1\|AXK10962.1\|3634314_3634716_-\|Zn-ribbon-domain-containing-OB-fold-protein	unknown	unknown	gnl\|CDD\|224462

Protein	Function_ID	Function_description	E-value
CP031113.1\|AXK10951.1\|3625264_3625609_+\|TIGR01244-family-phosphatase	gnl\|CDD\|225984	COG3453, COG3453, Uncharacterized protein conserved in bacteria [Function unknown].	3.40043e-35
CP031113.1\|AXK10954.1\|3627108_3628059_-\|IS481-like-element-IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	9.02206e-23
CP031113.1\|AXK10959.1\|3632362_3633523_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	4.16688e-115
CP031113.1\|AXK10955.1\|3628156_3629104_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.66209e-66
CP031113.1\|AXK10950.1\|3621457_3621976_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.12064e-44
CP031113.1\|AXK10949.1\|3620591_3621347_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.14565e-78
CP031113.1\|AXK10952.1\|3625697_3626168_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.38587e-30
CP031113.1\|AXK10953.1\|3626578_3626977_+\|GTP-binding-protein	gnl\|CDD\|234569	PRK00007, PRK00007, elongation factor G; Reviewed.	1.37761e-90
CP031113.1\|AXK11574.1\|3623764_3625165_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.43796e-109
CP031113.1\|AXK10960.1\|3633533_3633926_-\|acyl-dehydratase	gnl\|CDD\|239525	cd03441, R_hydratase_like, (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.	3.21769e-21
CP031113.1\|AXK10947.1\|3618385_3619171_-\|enoyl-CoA-hydratase	gnl\|CDD\|181723	PRK09245, PRK09245, crotonase/enoyl-CoA hydratase family protein.	5.15941e-155
CP031113.1\|AXK10956.1\|3629310_3630201_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176107	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate-domain of LysR-type transcriptional regulators, OccR and NocR, involved in the catabolism of opines and that of LysR for lysine biosynthesis which clustered together in phylogenetic trees. Opines, such as octopine and nopaline, are low molecular weight compounds found in plant crown gall tumors that are produced by the parasitic bacterium Agrobacterium. There are at least 30 different opines identified so far. Opines are utilized by tumor-colonizing bacteria as a source of carbon, nitrogen, and energy. NocR and OccR belong to the family of LysR-type transcriptional regulators that positively regulates the catabolism of nopaline and octopine, respectively. Both nopaline and octopalin are arginine derivatives. In Agrobacterium tumefaciens, NocR regulates expression of the divergently transcribed nocB and nocR genes of the nopaline catabolism (noc) region. OccR protein activates the occQ operon of the Ti plasmid in response to octopine. This operon encodes proteins required for the uptake and catabolism of octopine. The occ operon also encodes the TraR protein, which is a quorum-sensing transcriptional regulator of the Ti plasmid tra regulon. LysR is the transcriptional activator of lysA gene encoding diaminopimelate decarboxylase, an enzyme that catalyses the decarboxylation of diaminopimelate to produce lysine. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.25236e-65
CP031113.1\|AXK10945.1\|3616359_3617337_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176106	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LTTRs involved in degradation of aromatic compounds, such as CbnR, BenM, CatM, ClcR and TfdR, as well as that of other transcriptional regulators clustered together in phylogenetic trees, including XapR, HcaR, MprR, IlvR, BudR, AlsR, LysR, and OccR. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.33368e-60
CP031113.1\|AXK10957.1\|3630197_3631346_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	7.23571e-127
CP031113.1\|AXK10944.1\|3615061_3616234_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	4.27565e-82
CP031113.1\|AXK10946.1\|3617347_3618319_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	2.06741e-117
CP031113.1\|AXK10958.1\|3631353_3632325_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270296	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family; contains the type 2 periplasmic binding fold. Bug27 binds non-carboxylated solute nicotinamide, in contrast to BugD (aspartic acid transporter) and BugE (glutamate transporter) which both bind aliphatic carboxylated ligands. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) receptors present in a number of bacterial species, but mainly in proteobacteria. Bug proteins are the PBP components of the tripartite carboxylate transporters (TTT). Their expansive expansion in proteobacteria indicates a large functional diversity.	5.90573e-128
CP031113.1\|AXK10948.1\|3619163_3620396_-\|CoA-transferase	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	8.36236e-118
CP031113.1\|AXK10962.1\|3634314_3634716_-\|Zn-ribbon-domain-containing-OB-fold-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	5.62422e-24

>CP031113.1|AXK10952.1|3625697_3626168_+|universal-stress-protein
MFKKILIPTDGSPLSAQAANAGICFARSTGAEVVALHVTQPFAATIGFDGMAAAYAITDEDYEKASAEQAEKYLKLILDRAETAGVKAESRAVSNFNVADGIVQAAGEAGCDLIFIGSHGRSGLSRLLLGSVTAKVLSLAHTAVLVYRVKEDKDKK
>CP031113.1|AXK10951.1|3625264_3625609_+|TIGR01244-family-phosphatase
MSAAIKPLTENFAVAPQLGPADMADVAAAGYKSVIINRPDFEGGPDQPTAADVSQAAQALGLQVEYQPVVGSAMTAADVARFAELLRTMPGPVLAYCRTGTRCTNLFAAAQQLG
>CP031113.1|AXK11574.1|3623764_3625165_+|PLP-dependent-aminotransferase-family-protein
MRQADATLVTQLADDLARRIDEHGLRPGTRLPSIRRMAEQSGVSRFTVVEAYDRLVARGLVQSRHGAGFFVRARSASLTALASARVPQAAPETPVRVDVSWLLRNMFRETAAGMPGGAGLLPPEWLDPDMVAAAVRAVGRTVRGNLVSYGSPQGYAPLRQQLASMLQADGVPAHPERNLLTTNGVTHGLDIVARHLIKPGDTVLVEDPAWFVIFGRLAAFGARPVGVPRGPDGPDLAMLDRLAAEHKPRLYIINGAVHNPIGHTLSAGAAYDILRLAERHDFMVVEDDTYADLHPGGAMKLAALDRLERVILVGGFSKMLAASLRVGYIAAGAETLQRLTDLKMLAGLTSPELGERVVHRVLVEGQYQRHIERVRARVNEARLRSIQALQQLGLSVPHEPHAGMFVWADCGRDSEPVARNAAERGMLLAPGTLFSPSGAPSTMLRFSVAMVDTPGIWQSIAAVMAQ
>CP031113.1|AXK10950.1|3621457_3621976_+|MgtC/SapB-family-protein
MDTVWMEIWTTVRNEFADIPDVAEATRIVLRLGMAVALGGLLGYERERSGKAAGLRTHMLVALGAALFVLVPLQGGMEVGDLSRVLQGVIAGIGFLGAGVIIKLGNEGEIRGLTTSAGIWLTAAIGVAAGMGREATALASTLIALFVLAALRRLEKRIAARDDKRVVAQPPP
>CP031113.1|AXK10949.1|3620591_3621347_-|TerC-family-protein
MDYLVSLAQQPAAWAALATLIAMEVVLGIDNLIFISILTNKLPPQHQTKARRIGIGMALILRLALLGTVAFIVQLTQPVFELFGHGFSWRDVILVAGGLFLVWKATKEIHHHVDPNPGDDMFGGKAATLGFAAAVAQILMLDLVFSIDSIITAVGMTEHIPIMFVAVIVAVAVMLLAAEPLARFIERNPTVVMLALAFLMMIGMTLIAEGFGAHVPKGYIYAAMAFSALVEGLNMMARRAREGRGAGAAGG
>CP031113.1|AXK10948.1|3619163_3620396_-|CoA-transferase
MSGPLEGVRILDVTTVLMGPYATQILGDLGADVIKVEPPAGDNVRGIGPGRHADMGGIFLHANRSKRSIALDLKNPAGREALLKVAATCDVLVYNVRPQAMARLGLSYAEVAQANPSILYVGMYGYDQRGPYAARAAYDDLIQGAVGIPSLSVEAGSDIPRYAPSAMVDRIVGISAANAVTAGLYHRARTGQGQAIDVPMFETMAHLILGDHMMGQTFEPPLGPPGYPRILNADRRPYATRNGHICVLLYADKHWKAFFELIGQPGRDAADPRFRDIGTRTQHIHAIYRLVSDAIASRTTEEWLAAFEAADIPAMPVHTMASLLRDPHLEAIGFFGMVDHPSEGAVRMMAVPSRWSGTPPQPRGHAPRLGEHSVDVLKEAGYDDEAIAALVRNGAAIAAARQLPEGTDHD
>CP031113.1|AXK10947.1|3618385_3619171_-|enoyl-CoA-hydratase
MTDFLRHERHGGVLLLTMDRERTRNALSDADAVEALVQACARIGADLSVRAVVLTGSHGVFSSGGNLKTLSDTVGAGLGEPVHSLQAYRSGIQRIPLALYNLEVPTIAAVNGPAIGAGCDLACMCDIRLAARQASFAESFVKLGLTPGDGGAWLLPRIVGMSRACELAFTGRSIDAARARELGLVSEVFDADALLPAALALAQEIAQHSGHALRLTKRLLREGQHTRLDTLLELSAGFQALAHHTQEHAGALDAHLSRKRG
>CP031113.1|AXK10946.1|3617347_3618319_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHSRTLALALLSVAALAQGGSARAASDYPAHPVKIIVSLPPGSGADTTARFLSKHLAERFKQPFVVENRPGGNSFIAAQAVATAPPDGYTLFVASNSPMTTNAAVFKNLPYDAVKDFAPVAPIARFPMALVVPANSPYRSVADLVAAARAAPGQLNFASGTATYQVVLELFHEQNGIKATHVPYKGTSAALADVAGGVVQYSVADVSAALPLIRGGKLRPLAVTSTRRIKDLPDVPTMQESGNKGFEAYAWTAAFFPAKVDPAIVARVSDAVQALVRSQEGKAFMEQLGGEPFVGGPDTLAAFQRDELASMRRIAKLANIQQE
>CP031113.1|AXK10945.1|3616359_3617337_+|LysR-family-transcriptional-regulator
MWTGQYIVHIASPAHHWRRAVELRQLKQLLVLSETLNFHRAAERLHMAQPPLSTAIKKLEQELGVQLFERLPAGLQPTPAAEVVLRYARATLFYADEIQRAAQEGASGKQGMLKVGFVGSSIYSLMPQLLSAFRKDYPRVDLVIEESTTVDLLRRLDAHTLDVALVRFPVLEPSTARITLLQADHLMLAVPAGSRYAQRDDVALDELADEPFIGYSRTHVPGMHALIMYAFQQYGVVPHIAQEAIQVQTILSLVESGLGLAIVPKVACRQAGSGVRLVNVPQLAETIKVGIALAVHPDNATPTTANFVDMACRLMQTEPAAGQAR
>CP031113.1|AXK10944.1|3615061_3616234_-|acyl-CoA-dehydrogenase
MGAILGTIIEALQLAAIPAHDEALRPAVRAFLDEALREMPADRRARSWMGHDAEFSRALARQGWLGLTLPVEYGGAGRSNFARFVLSEELLAVGAPVSAHWVADRQTAPLILRFGSPAQRAFYLPRIIRGEAFFAIGMSEPDTGSDLASVRTRATPVADGWLLNGRKIWTTNAHRSHYMCALVRTSGAPEDRHRGLSQMIFDLALPGIEIRPIRDIAGDAHFCEVLFDNVLLPHDALVGEEGSGWRQVMAELALERSGPERIYSSMVLLDGWLAHLRCDAAPQRAQVCLAGRLAARLAVLRSMSLAVSQRLEQGADASLAAVLVKDLGTEFEQAVPELIGQALHASPQPAPDDVLMRTLAYLTLINPTFSLRGGTRHILRGIIARELGLR
>CP031113.1|AXK10953.1|3626578_3626977_+|GTP-binding-protein
MTRRTSIERYRNIGISAHIDAGKATTTERILFYTGITHKLGEVHEGAATMDWMEQEQGRGITITSAATTAFWRGMAGNYPEHRINIIDTPGHVDFTIEVERSMRVLDGACMVYDSVGGVQEVATVMVVLPGQ
>CP031113.1|AXK10954.1|3627108_3628059_-|IS481-like-element-IS481-family-transposase
MNTHKHARLTFLRRLEMVQQLIAHQVCVPEAARAYGVTAPTVRKWLGRFLAQGQAGLADASSRPTVSPRAIAPAKALAIVELRRKRLTQARIAQALGVSASTVSRVLARAGLSHLADLEPAEPVVRYEHQAPGDLLHIDIKKLGRIQRPGHRVTGNRRDTVEGAGWDFVFVAIDDHARVAFTDIHPDERFPSAVQFLKDAVAYYQRLGVTIQRLLTDNGSAFRSRAFAALCHELGIKHRFTRPYRPQTNGKAERFIQSALREWAYAHTYQNSQHRADAMKSWLHHYNWHRPHQGIGRAVPISRLNLDKYNLLTVHS
>CP031113.1|AXK10955.1|3628156_3629104_-|dihydrodipicolinate-synthase-family-protein
MQASHGARIDEQTSGVYVIAATPFADDGELDLASLDSLTDFYLDKDVAGLTILGMMGEASKLTEAETATVMTRILKRVDGRVPVVVGVSHPSNRHLERLARQAMELGAAGVMVAPAAGRHTDDQVYGYYATVAERLGADIPICLQDFPQSAGVHTSVAVIHRLVDDFPQVVMLKHEDFPGMRKLSQVRARSEAEGRRRISILVGNGGLFLPQEMLRGADGAMTGFAYPEMLVQVCRLFAAGKAEAAEDLFNLYLPLLRHEFQYGIGLALRKETLRRRGAIRSAYVRQPGPALDAVDHAELGRLIARLEAQLGRAA
>CP031113.1|AXK10956.1|3629310_3630201_+|LysR-family-transcriptional-regulator
MKLNLRQIEVFRAVMITGSIRGASELLFVSQPAVSRLLSHMEQRIGFALFERIRGRLYATLEARKLFHEVEAVYAGVQRVNDMARDLFEHQEGILNLVASPSLGQMLIPAAIAQYRQAHPQVKLSFHHLTQAPLTERLLKRQADLALTILPAGHPNLEQEEIGAARMVLICPPGHPLAGREPVGAEALAPYPLVAYERGSAFGQKLQAWFDAQSVAARPVIEVGSPQNTCALVQAGAGVALVDEFSARSWPGAGFVMRPVRDLAPLTAYLLRLREEPASHLMQSFIETLRRVMRRA
>CP031113.1|AXK10957.1|3630197_3631346_-|CoA-transferase
MLNHALAGITVLDFSQGIAGPHGACLLGEMGAEVIKIEPPAGDWLRGLGHRQGGTSVLFGYFNRGKAGVALDLKDHAQRRQALALIDKADVLIESNRPGVMARLGLGYEQARQRNPGLVYISVTGFGQDGPHRDLPATDAAMQAYSGFSFGAGDMRDPVRVRVSVVDIVTGVYVSNAALAALMARHGNQGQGQYIDLSLMHGISAVQGAKYAEHAATRGVISRELYAAIGIYPTRDGHIALSAMRDQQVTDFIGLAGRADLLADPRYATQQARYDNQDELRALIAAELAKQPTAHWIEAARRIDLICQPVQTYDQFRQDPQVRTYELFQDMDLGYDMPLPAVRMPGMTATQASLRPPPRLGADTAAVLRRHGASPPSADATP
>CP031113.1|AXK10958.1|3631353_3632325_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MHGKNALRALLAGLALGATAAGAAPYPERPVRLIAPIAVGGLTDTLARLVASGLADKLGQPVVVENKPGAGGIIGMEAAAQAAPDGYTLILVYQGVAAVNASLYKNLPYDTRRDFAPVAGLGNFPLVLVASPASGIQSVGALLERAGKQAKAPSYASAGNATTSHLTMELFKNASGLQALHVPYKGEGPANTDVAGGQVDIAFSSLASVAPLVKSGRLVALGISTPERSAVLPDVPTIAQAGVADFEAVGWYGLLAPAGTPAEVVAKLSDAVAAVLDQPAIRAKLEALGVNARATPAADFGRQIDAETEKWRAVIQTAGITLD
>CP031113.1|AXK10959.1|3632362_3633523_-|acyl-CoA-dehydrogenase
MQFTHEHRELARTTRRIIAEHLDPYLDEWEAAQMFPAHQVMKALGSAGLLGIGKPAEYGGMALDFSYEMVFAETLGEVRSSGLSSAIGVQSTMCTPALARHGSDALKRAYLAPTIAGDLVGCIGASEASAGSDVSQIKTWARRDGDDYVINGSKMWITNGVQGDWICLLCNTSQEGGPHKNKSLIIVPLDTPGVSVSRKLDKLVLRASDTAELFFDDVRVPVSNRIGAENMGFIYQMEQFQEERMFVAARGMRSMERVIEETIAYAGQRQVFGGTVLSNQVVYHKLAQMQTEIEALRSLLYRAIGQYLDGQDITQLASMAKYCAGRLSMRIPNECLQFWGGQGVMNENWISRAYRDLRQTAIGGGANEIMLEVIAKTMGIHPGKRA
>CP031113.1|AXK10960.1|3633533_3633926_-|acyl-dehydratase
MRNTMTQRLEEVSMRVTQADIDIYAELTDDFNPLHVDPAFAATTPMGGTIAHGTLSVNLIWQSLARSLGAAALARIDLDIRFLKPLFAGGAITAGGQPDAAEPDRYEVWVKGADGATLIAGHARLAPITD
>CP031113.1|AXK10961.1|3633922_3634318_-|hypothetical-protein
MTQLYTYETFTPGTVLGEWAEPLDARLVATWGRLFGAEARDQPARQVGLTVALMIRAYLNVVTPRPPGNIHAQQILSIDGLPGVGETVRSRIRCLGKEIRRERRYLQLEVSGVGERERNLYTGRMNLIWAA
>CP031113.1|AXK10962.1|3634314_3634716_-|Zn-ribbon-domain-containing-OB-fold-protein
MDKPPITPNAESLPFWQGCRDHRLRYQQCASCGTVQRIPRAVCTHCHGRALQWRDSAGQGVVLSHTTVRRAPTPAFKADTPYAIALVDLDEGFRLMVNVRGGAGAPLAIGARVRIVFEARGDGAVPIAEMETP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 70032

Natrialba_phage(12.5%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08022.1\|0_1920_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
AXK08023.1\|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
AXK08024.1\|2605_3403_+	ParA family protein	Q8JL10	Natrialba_phage	5.6e-20	34.9
AXK08025.1\|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK08026.1\|4214_5132_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.9e-16	38.1
AXK08027.1\|6721_7912_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	3.1e-14	29.2
AXK08028.1\|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA
AXK08029.1\|8540_9074_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	1.4e-11	30.5
AXK08030.1\|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA
AXK08031.1\|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA
AXK08032.1\|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA
AXK08033.1\|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
AXK08034.1\|11661_15774_+	DNA-directed RNA polymerase subunit beta	A0A0N9R0J7	Chrysochromulina_ericina_virus	2.4e-21	28.8
AXK08035.1\|15773_20018_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	3.5e-68	24.7
AXK11385.1\|20126_20531_-	lipoprotein	NA	NA	NA	NA
AXK08036.1\|20771_21947_+	hypothetical protein	NA	NA	NA	NA
AXK08037.1\|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AXK08038.1\|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA
AXK08039.1\|27282_28233_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08040.1\|28313_28649_-	CoA transferase	NA	NA	NA	NA
AXK08041.1\|28673_29108_-	hypothetical protein	NA	NA	NA	NA
AXK08042.1\|29140_30367_-	thiolase family protein	NA	NA	NA	NA
AXK08043.1\|30363_30861_-	dehydratase	NA	NA	NA	NA
AXK11386.1\|31068_31977_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08044.1\|32162_33005_+	enoyl-CoA hydratase	NA	NA	NA	NA
AXK08045.1\|33047_34469_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK08046.1\|34624_35575_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08047.1\|35571_36762_-	MFS transporter	NA	NA	NA	NA
AXK08048.1\|36948_37923_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
AXK08049.1\|37924_40063_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
AXK08050.1\|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
AXK08051.1\|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
AXK08052.1\|41317_42211_+	M48 family peptidase	NA	NA	NA	NA
AXK08053.1\|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA
AXK08054.1\|42686_43217_+	peptide deformylase	E3SLL2	Synechococcus_phage	3.7e-12	35.4
AXK08055.1\|43661_44612_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08056.1\|45111_45747_+	hypothetical protein	NA	NA	NA	NA
AXK08057.1\|45718_45955_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK08058.1\|46082_46976_+	AEC family transporter	NA	NA	NA	NA
AXK08059.1\|48145_49393_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AXK08060.1\|49389_50004_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
AXK08061.1\|50139_51090_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08062.1\|51132_52389_+	muropeptide transporter	NA	NA	NA	NA
AXK08063.1\|53620_54355_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA
AXK08064.1\|54360_54951_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-20	33.6
AXK08065.1\|54975_55665_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK08066.1\|55661_56423_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK08067.1\|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08068.1\|57495_58446_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08069.1\|59245_60472_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXK08070.1\|60471_60891_-	transcriptional regulator	NA	NA	NA	NA
AXK08071.1\|61074_62016_-	hypothetical protein	NA	NA	NA	NA
AXK08072.1\|62439_63276_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08073.1\|63470_64052_-\|protease	protease	NA	NA	NA	NA
AXK08074.1\|64064_64382_-	ferredoxin	NA	NA	NA	NA
AXK08075.1\|64485_65544_-	oxidoreductase	NA	NA	NA	NA
AXK08076.1\|65578_66850_-	TRAP transporter large permease	NA	NA	NA	NA
AXK08077.1\|67479_68661_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA
AXK08078.1\|69081_70032_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

77630 : 136102

Planktothrix_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08085.1\|77630_78581_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11388.1\|78654_79599_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08086.1\|79595_81470_-	polysaccharide biosynthesis protein	A0A2P1ELS8	Moumouvirus	2.0e-23	26.9
AXK08087.1\|82817_83522_-	DUF2837 family protein	NA	NA	NA	NA
AXK08088.1\|83518_84625_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AXK08089.1\|84886_85480_-	sugar transferase	NA	NA	NA	NA
AXK08090.1\|85476_86709_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA
AXK08091.1\|86726_87986_-	glycosyltransferase WbuB	NA	NA	NA	NA
AXK08092.1\|88009_89098_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A0N9R0B2	Chrysochromulina_ericina_virus	4.8e-46	36.3
AXK08093.1\|89105_90206_-	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L0G1	Tupanvirus	3.3e-31	29.7
AXK08094.1\|90209_90785_-	N-acetyltransferase	NA	NA	NA	NA
AXK08095.1\|90788_91841_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
AXK11389.1\|91971_92979_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
AXK08096.1\|92980_94267_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA
AXK08097.1\|94283_94439_-	hypothetical protein	NA	NA	NA	NA
AXK08098.1\|94463_95267_-	type III pantothenate kinase	NA	NA	NA	NA
AXK08099.1\|95263_96130_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AXK08100.1\|96198_97335_+	ABC transporter permease	NA	NA	NA	NA
AXK08101.1\|97334_98174_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.1e-21	32.4
AXK08102.1\|99106_99709_+	hypothetical protein	NA	NA	NA	NA
AXK08103.1\|99738_100392_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK08104.1\|100524_101781_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	6.2e-66	40.5
AXK08105.1\|101783_102728_+	D-amino acid aminotransferase	NA	NA	NA	NA
AXK08106.1\|102803_103079_+	DUF493 family protein	NA	NA	NA	NA
AXK08107.1\|103086_103749_+	octanoyltransferase	NA	NA	NA	NA
AXK08108.1\|103810_104812_+	lipoyl synthase	NA	NA	NA	NA
AXK08109.1\|104826_105375_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	3.7e-47	53.4
AXK08110.1\|105432_106329_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA
AXK08111.1\|106325_107387_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.6e-78	44.8
AXK08112.1\|107422_108373_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08113.1\|109271_110465_+	cystathionine beta-lyase	NA	NA	NA	NA
AXK08114.1\|110546_111176_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA
AXK08115.1\|111237_111921_-	SPOR domain-containing protein	NA	NA	NA	NA
AXK08116.1\|111930_113613_-\|tRNA	arginine--tRNA ligase	NA	NA	NA	NA
AXK11390.1\|113900_114248_+	DUF1840 domain-containing protein	NA	NA	NA	NA
AXK08117.1\|114338_114656_+	hypothetical protein	NA	NA	NA	NA
AXK11391.1\|114938_115955_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK08118.1\|116030_116831_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK08119.1\|116827_117703_-	sugar ABC transporter permease	NA	NA	NA	NA
AXK08120.1\|117713_119006_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08121.1\|119048_120089_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.0e-22	33.7
AXK08122.1\|120194_121016_-	phosphodiesterase	NA	NA	NA	NA
AXK08123.1\|121116_122067_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08124.1\|122165_123071_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.8e-21	31.7
AXK08125.1\|123067_123901_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK11392.1\|124737_125748_-	extracellular solute-binding protein	NA	NA	NA	NA
AXK11393.1\|125744_126134_-	hypothetical protein	NA	NA	NA	NA
AXK11394.1\|127027_128281_+	amidase	NA	NA	NA	NA
AXK08126.1\|128371_130072_-	2-isopropylmalate synthase	NA	NA	NA	NA
AXK08127.1\|130498_131146_-	hypothetical protein	NA	NA	NA	NA
AXK11395.1\|131144_132584_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA
AXK08128.1\|132676_132979_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
AXK08129.1\|133006_133885_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08130.1\|135151_136102_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

164877 : 225386

Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08151.1\|164877_165828_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08152.1\|167271_168174_-	YgcG family protein	NA	NA	NA	NA
AXK08153.1\|168151_168781_-	LemA family protein	NA	NA	NA	NA
AXK08154.1\|169111_170494_+	RNA helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.3e-42	29.5
AXK08155.1\|170527_171157_+	threonine transporter RhtB	NA	NA	NA	NA
AXK08156.1\|171205_172813_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	9.3e-14	37.8
AXK08157.1\|172837_173521_+	hypothetical protein	NA	NA	NA	NA
AXK11398.1\|173602_174079_-	bacterioferritin	NA	NA	NA	NA
AXK08158.1\|174285_175236_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08159.1\|176351_176879_+	META domain-containing protein	NA	NA	NA	NA
AXK08160.1\|176970_177786_+	META domain-containing protein	NA	NA	NA	NA
AXK08161.1\|177846_178581_+	sulfurtransferase	NA	NA	NA	NA
AXK08162.1\|178618_180697_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-27	23.6
AXK08163.1\|180946_181219_-	hypothetical protein	NA	NA	NA	NA
AXK08164.1\|181317_182406_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXK08165.1\|182409_184314_+	outer membrane protein assembly factor	NA	NA	NA	NA
AXK08166.1\|184310_187985_+	DUF490 domain-containing protein	NA	NA	NA	NA
AXK08167.1\|188045_188609_+	dCTP deaminase	S5VM63	Pseudomonas_phage	2.6e-72	75.3
AXK08168.1\|188616_189039_-	glyoxalase	NA	NA	NA	NA
AXK08169.1\|189066_189486_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA
AXK11399.1\|189514_189961_-	GNAT family N-acetyltransferase	Q9AZG4	Lactococcus_phage	1.2e-08	29.4
AXK08170.1\|190087_190585_+	hypothetical protein	NA	NA	NA	NA
AXK08171.1\|190739_193010_+	lysine decarboxylase	NA	NA	NA	NA
AXK08172.1\|193058_194291_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK08173.1\|194388_195339_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08174.1\|195384_196077_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.4e-83	73.8
AXK08175.1\|196073_196967_+	ZIP family metal transporter	NA	NA	NA	NA
AXK08176.1\|197361_198462_+	aminomethyltransferase	NA	NA	NA	NA
AXK08177.1\|198543_198918_+	glycine cleavage system protein H	NA	NA	NA	NA
AXK08178.1\|198977_201842_+	glycine dehydrogenase (aminomethyl-transferring)	E3SN07	Prochlorococcus_phage	1.2e-261	51.4
AXK08179.1\|201986_202727_-	FadR family transcriptional regulator	NA	NA	NA	NA
AXK08180.1\|202796_204008_+	CoA transferase	NA	NA	NA	NA
AXK08181.1\|204036_205005_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08182.1\|205617_206568_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08183.1\|206724_207048_+	PsiF repeat family protein	NA	NA	NA	NA
AXK08184.1\|207152_208202_-	cyclase family protein	NA	NA	NA	NA
AXK08185.1\|208198_209023_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA
AXK08186.1\|209023_209320_-	YciI family protein	NA	NA	NA	NA
AXK08187.1\|209345_209621_-	muconolactone Delta-isomerase	NA	NA	NA	NA
AXK08188.1\|209677_210322_-	CoA transferase subunit B	NA	NA	NA	NA
AXK08189.1\|210321_211008_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
AXK11400.1\|211137_211989_+	IclR family transcriptional regulator	NA	NA	NA	NA
AXK08190.1\|212039_212765_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK08191.1\|212796_214146_-	short-chain fatty acid transporter	NA	NA	NA	NA
AXK08192.1\|214257_215190_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA
AXK08193.1\|215647_218443_-\|protease	serine protease autotransporter SphB1	NA	NA	NA	NA
AXK08194.1\|219036_221979_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
AXK08195.1\|222050_222770_+	7-cyano-7-deazaguanine synthase QueC	A0A0A0RPC6	Escherichia_phage	8.0e-50	43.9
AXK08196.1\|222808_223357_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	1.2e-21	41.7
AXK08197.1\|223511_224411_+	virginiamycin B lyase	NA	NA	NA	NA
AXK08198.1\|224435_225386_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

233317 : 301468

Bacillus_phage(20.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08206.1\|233317_234268_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08207.1\|234354_235305_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08208.1\|235301_236252_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08209.1\|236349_237147_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK08210.1\|238096_238507_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
AXK08211.1\|239528_240272_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK08212.1\|240315_241359_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08213.1\|241529_243632_+	hypothetical protein	NA	NA	NA	NA
AXK08214.1\|245042_245999_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08215.1\|246017_246509_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AXK08216.1\|246505_247861_-	polynucleotide adenylyltransferase PcnB	A0A1B1IVF3	uncultured_Mediterranean_phage	3.4e-25	36.8
AXK08217.1\|247861_248560_-	HAD-IB family hydrolase	NA	NA	NA	NA
AXK08218.1\|248556_249258_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA
AXK08219.1\|249510_250560_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.6e-68	43.6
AXK08220.1\|250665_251607_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AXK08221.1\|251603_253493_-	DNA mismatch repair protein MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-79	32.8
AXK08222.1\|253579_254218_+	hypothetical protein	NA	NA	NA	NA
AXK11401.1\|254360_255605_-	N-acetylmuramoyl-L-alanine amidase	A0A2H4JCM7	uncultured_Caudovirales_phage	4.1e-17	30.3
AXK08223.1\|255676_256213_-\|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
AXK08224.1\|256364_257756_+	class II fumarate hydratase	NA	NA	NA	NA
AXK08225.1\|257772_258753_-	AEC family transporter	NA	NA	NA	NA
AXK08226.1\|258888_259872_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA
AXK08227.1\|259936_260836_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08228.1\|260942_262697_+	gamma-glutamyltransferase	NA	NA	NA	NA
AXK08229.1\|262704_263829_-	CoA transferase	NA	NA	NA	NA
AXK08230.1\|263842_264823_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08231.1\|267063_267609_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
AXK08232.1\|267692_269312_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA
AXK08233.1\|269327_270482_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AXK08234.1\|270495_270621_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA
AXK08235.1\|270617_272369_+	thiol reductant ABC exporter subunit CydD	W8CYL7	Bacillus_phage	3.4e-09	23.8
AXK08236.1\|272365_274045_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	3.6e-16	27.6
AXK08237.1\|274080_274656_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.4e-28	43.1
AXK08238.1\|278334_278496_+	DUF4224 domain-containing protein	NA	NA	NA	NA
AXK08239.1\|278503_278644_+	hypothetical protein	NA	NA	NA	NA
AXK08240.1\|279162_279612_-\|protease	ClpXP protease specificity-enhancing factor	NA	NA	NA	NA
AXK08241.1\|279621_280233_-	glutathione S-transferase	NA	NA	NA	NA
AXK08242.1\|280391_281246_-	cytochrome c1	NA	NA	NA	NA
AXK08243.1\|281265_282648_-	cytochrome b	NA	NA	NA	NA
AXK08244.1\|282712_283354_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
AXK08245.1\|283493_283952_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
AXK08246.1\|283976_284753_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AXK11402.1\|284806_285943_+	PDZ domain-containing protein	W5SAB9	Pithovirus	1.2e-07	31.2
AXK08247.1\|285939_286890_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08248.1\|286987_287614_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA
AXK08249.1\|287636_288563_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA
AXK08250.1\|288571_290158_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08251.1\|290154_291159_-	alpha/beta hydrolase	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	7.5e-30	31.5
AXK08252.1\|291358_292219_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK08253.1\|292250_293252_-	2-isopropylmalate synthase	NA	NA	NA	NA
AXK08254.1\|293322_294132_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK08255.1\|294209_296069_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
AXK08256.1\|296197_297400_-	MFS transporter	NA	NA	NA	NA
AXK08257.1\|297513_298395_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08258.1\|299897_300458_-	5'-3'-deoxyribonucleotidase	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	3.2e-14	30.8
AXK08259.1\|300517_301468_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

555258 : 614556

Acinetobacter_phage(27.27%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08469.1\|555258_556209_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08470.1\|557532_558309_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXK08471.1\|558343_560116_+	M61 family peptidase	NA	NA	NA	NA
AXK08472.1\|560117_561020_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.9e-08	24.0
AXK08473.1\|561144_561504_+	dihydroneopterin aldolase	NA	NA	NA	NA
AXK08474.1\|561535_562498_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	4.6e-93	64.5
AXK08475.1\|562595_563546_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08476.1\|563558_564494_-	D-2-hydroxyacid dehydrogenase family protein	A0A1J0F959	Only_Syngen_Nebraska_virus	6.4e-15	27.7
AXK08477.1\|564553_565393_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA
AXK08478.1\|565389_566559_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA
AXK08479.1\|566555_567845_-	hypothetical protein	NA	NA	NA	NA
AXK08480.1\|567887_568262_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
AXK08481.1\|568367_569105_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
AXK08482.1\|569112_569817_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AXK08483.1\|570080_571601_+	anthranilate synthase component I	S4VT78	Pandoravirus	9.0e-43	32.1
AXK08484.1\|571656_572220_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.1e-65	62.1
AXK08485.1\|572238_573270_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.4e-73	42.7
AXK08486.1\|573266_574055_+	indole-3-glycerol-phosphate synthase	A0A0P0IR83	Acinetobacter_phage	5.1e-66	53.0
AXK08487.1\|574230_575220_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08488.1\|576975_577926_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08489.1\|579148_580051_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08490.1\|580052_580907_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
AXK08491.1\|580953_582063_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK08492.1\|582073_582592_-	flavin reductase	NA	NA	NA	NA
AXK08493.1\|582621_583254_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
AXK08494.1\|583325_583985_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
AXK08495.1\|583981_585202_-	MFS transporter	NA	NA	NA	NA
AXK08496.1\|585470_586343_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
AXK08497.1\|586498_587236_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK08498.1\|587238_588834_-	acyl-CoA synthetase	NA	NA	NA	NA
AXK11423.1\|588965_589955_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08499.1\|589951_590662_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK11424.1\|590757_591774_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK08500.1\|592045_592672_-	aminotransferase	NA	NA	NA	NA
AXK08501.1\|592727_593855_-	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	3.8e-38	37.8
AXK08502.1\|593860_599578_-	excinuclease ABC subunit A	A0A1B1IVR3	uncultured_Mediterranean_phage	1.0e-195	39.5
AXK08503.1\|599861_600077_+	hypothetical protein	NA	NA	NA	NA
AXK08504.1\|600145_601090_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	8.4e-07	23.2
AXK08505.1\|601278_602214_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
AXK08506.1\|602331_603903_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08507.1\|603982_605191_+	ABC transporter permease	NA	NA	NA	NA
AXK08508.1\|605688_606606_+	DMT family transporter	NA	NA	NA	NA
AXK08509.1\|608966_609188_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
AXK11425.1\|609518_610535_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK08510.1\|610619_610871_-	cell division topological specificity factor MinE	NA	NA	NA	NA
AXK08511.1\|610874_611690_-	septum site-determining protein MinD	NA	NA	NA	NA
AXK08512.1\|611802_612681_-	septum site-determining protein MinC	NA	NA	NA	NA
AXK08513.1\|612792_614556_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.0e-162	50.0

DBSCAN-SWA_6

620710 : 674449

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08517.1\|620710_621661_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08518.1\|621729_622728_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08519.1\|622732_623413_-	tellurite resistance TerB family protein	NA	NA	NA	NA
AXK08520.1\|623550_623943_+	OsmC family peroxiredoxin	NA	NA	NA	NA
AXK11426.1\|624050_625067_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK08521.1\|625306_626092_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AXK08522.1\|626186_627596_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
AXK08523.1\|627606_628407_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
AXK08524.1\|628427_629198_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXK08525.1\|629240_629708_+	ribonuclease HI	J9Q745	Salmonella_phage	5.6e-36	50.7
AXK08526.1\|629704_630655_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08527.1\|632603_633482_-	fatty acid desaturase	NA	NA	NA	NA
AXK08528.1\|634408_637387_-	hypothetical protein	NA	NA	NA	NA
AXK08529.1\|637739_638690_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08530.1\|638686_639775_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AXK08531.1\|639810_640674_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
AXK08532.1\|641813_642203_-	DNA-binding protein	NA	NA	NA	NA
AXK08533.1\|642206_642989_-	enoyl-CoA hydratase	NA	NA	NA	NA
AXK08534.1\|643022_643775_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK08535.1\|644083_645223_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08536.1\|645219_646011_+	ATP-binding cassette domain-containing protein	A0A1M7XV31	Cedratvirus	1.7e-08	29.4
AXK08537.1\|646007_646757_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-09	27.8
AXK08538.1\|646753_647626_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK08539.1\|647625_648627_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK08540.1\|648623_649787_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK08541.1\|649812_650496_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK08542.1\|650449_651784_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AXK08543.1\|651776_652871_+	CoA transferase	NA	NA	NA	NA
AXK11427.1\|653636_654587_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08544.1\|656527_657787_+	YeaH/YhbH family protein	NA	NA	NA	NA
AXK08545.1\|657783_659322_+	SpoVR family protein	NA	NA	NA	NA
AXK08546.1\|659318_660515_-	MFS transporter	NA	NA	NA	NA
AXK08547.1\|660511_661903_-	MmgE/PrpD family protein	NA	NA	NA	NA
AXK08548.1\|661899_662916_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08549.1\|662984_664220_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
AXK08550.1\|664320_665115_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK08551.1\|665484_665892_+	GFA family protein	NA	NA	NA	NA
AXK08552.1\|666309_666582_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXK08553.1\|667163_668018_+	urease accessory protein UreD	NA	NA	NA	NA
AXK08554.1\|668118_668421_+	urease subunit gamma	NA	NA	NA	NA
AXK08555.1\|668447_669083_+	urease accessory protein UreJ	NA	NA	NA	NA
AXK08556.1\|669099_669408_+	urease subunit beta	NA	NA	NA	NA
AXK08557.1\|669404_671120_+	urease subunit alpha	NA	NA	NA	NA
AXK08558.1\|671122_671740_+	urease accessory protein UreE	NA	NA	NA	NA
AXK08559.1\|671840_672425_+	urease accessory protein UreF	NA	NA	NA	NA
AXK08560.1\|672449_673094_+	urease accessory protein UreG	NA	NA	NA	NA
AXK08561.1\|673498_674449_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

723336 : 763333

Pseudomonas_phage(33.33%)

integrase,transposase,tRNA,protease

attL 720635:720653|attR 740522:740540

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
720635:720653	attL	NA	NA	NA	NA
AXK08598.1\|723336_723984_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXK08599.1\|723980_724763_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AXK08600.1\|724835_725927_+	redox-regulated ATPase YchF	NA	NA	NA	NA
AXK08601.1\|726206_727334_+\|integrase	site-specific integrase	A0A1B0VMI6	Pseudomonas_phage	1.4e-48	33.6
AXK08602.1\|727675_728722_+	Fic family protein	NA	NA	NA	NA
AXK11430.1\|728732_728873_+	DEAD/DEAH box helicase	NA	NA	NA	NA
AXK08603.1\|728869_731989_+	restriction endonuclease	NA	NA	NA	NA
AXK08604.1\|731990_734942_+	restriction endonuclease subunit M	G8I4P9	Mycobacterium_phage	2.9e-21	25.1
AXK08605.1\|734957_736169_+	chromosome segregation protein SMC	NA	NA	NA	NA
AXK08606.1\|736351_737302_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08607.1\|737318_737813_+	DUF4276 family protein	NA	NA	NA	NA
AXK08608.1\|737816_738074_+	hypothetical protein	NA	NA	NA	NA
AXK08609.1\|738098_739529_+	ATP-dependent helicase	NA	NA	NA	NA
AXK08610.1\|739610_739895_+	ATP-dependent helicase	A0A1V0SIN4	Klosneuvirus	6.8e-05	34.1
AXK08611.1\|740678_741629_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
740522:740540	attR	NA	NA	NA	NA
AXK08612.1\|742047_744612_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AXK08613.1\|744656_746510_-	hypothetical protein	NA	NA	NA	NA
AXK08614.1\|746842_748414_+	winged helix family transcriptional regulator	NA	NA	NA	NA
AXK08615.1\|749854_750805_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08616.1\|750890_751631_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK08617.1\|751857_752805_-	hypothetical protein	NA	NA	NA	NA
AXK08618.1\|754192_755143_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08619.1\|755335_756151_+	MerR family transcriptional regulator	NA	NA	NA	NA
AXK08620.1\|756283_757723_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
AXK08621.1\|757736_758078_+	cupin domain-containing protein	NA	NA	NA	NA
AXK08622.1\|758132_759788_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AXK08623.1\|759939_760950_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08624.1\|761082_761856_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08625.1\|762382_763333_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

773260 : 821921

Bovine_alphaherpesvirus(10.0%)

holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08633.1\|773260_774211_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08634.1\|774348_775101_+	uracil-DNA glycosylase	A0A1Y0B680	Bovine_alphaherpesvirus	2.5e-46	47.5
AXK08635.1\|775339_777064_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	9.5e-49	32.9
AXK08636.1\|777083_778343_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AXK08637.1\|778357_779452_-	CCA-adding enzyme	A0A0F6YPT7	Sinorhizobium_phage	2.4e-50	50.5
AXK08638.1\|779448_781575_-	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	5.5e-14	36.6
AXK08639.1\|781587_782268_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
AXK11434.1\|782545_783919_+	MFS transporter	NA	NA	NA	NA
AXK08640.1\|783920_784940_+	histone deacetylase family protein	A0A2K9L473	Tupanvirus	3.4e-22	31.7
AXK08641.1\|785003_785975_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08642.1\|786039_786990_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08643.1\|787087_787930_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
AXK08644.1\|787929_788265_-\|holin	phage holin family protein	NA	NA	NA	NA
AXK08645.1\|788335_789754_-	adenosylhomocysteinase	S4VPF6	Pandoravirus	8.7e-40	29.4
AXK08646.1\|790033_791074_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
AXK08647.1\|791153_791405_-	DUF1289 domain-containing protein	NA	NA	NA	NA
AXK08648.1\|791515_792814_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.6e-125	60.9
AXK08649.1\|792962_793817_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
AXK08650.1\|793813_794704_+	acyltransferase	NA	NA	NA	NA
AXK08651.1\|794746_795658_+	diaminopimelate epimerase	NA	NA	NA	NA
AXK08652.1\|795684_796377_+	DUF484 family protein	NA	NA	NA	NA
AXK08653.1\|796391_797372_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	3.3e-14	30.5
AXK08654.1\|797384_799526_-	TonB-dependent receptor	NA	NA	NA	NA
AXK08655.1\|799574_800543_-	nickel transporter	NA	NA	NA	NA
AXK11435.1\|800533_801157_-	DUF1007 family protein	NA	NA	NA	NA
AXK08656.1\|801162_802098_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08657.1\|802094_802991_-	metal ABC transporter permease	NA	NA	NA	NA
AXK08658.1\|802987_803710_-	metal ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.1e-11	30.0
AXK08659.1\|803700_803901_-	hypothetical protein	NA	NA	NA	NA
AXK08660.1\|804038_804542_+	transcriptional repressor	NA	NA	NA	NA
AXK08661.1\|804818_805934_+	GTP-binding protein	NA	NA	NA	NA
AXK08662.1\|806076_806541_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
AXK08663.1\|806688_807228_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
AXK08664.1\|807249_808584_+	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	3.5e-43	29.6
AXK11436.1\|808597_808903_-	RND transporter	NA	NA	NA	NA
AXK08665.1\|809327_809909_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
AXK08666.1\|809989_810940_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08667.1\|811037_811988_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08668.1\|812085_813036_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08669.1\|813476_814382_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK08670.1\|814437_816045_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA
AXK08671.1\|816298_817804_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
AXK08672.1\|817818_818283_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
AXK08673.1\|818572_819523_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08674.1\|819684_820215_+	hypothetical protein	NA	NA	NA	NA
AXK08675.1\|820214_820526_+	cell division protein ZapA	NA	NA	NA	NA
AXK08676.1\|820970_821921_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1006130 : 1108251

Bacillus_virus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08816.1\|1006130_1007081_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08817.1\|1007183_1007846_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK08818.1\|1007948_1008359_-	hypothetical protein	NA	NA	NA	NA
AXK08819.1\|1008463_1009465_+	amidase	NA	NA	NA	NA
AXK08820.1\|1009467_1010664_+	CoA transferase	NA	NA	NA	NA
AXK08821.1\|1010684_1011488_+	enoyl-CoA hydratase	NA	NA	NA	NA
AXK08822.1\|1011568_1011865_+	histidine kinase	NA	NA	NA	NA
AXK08823.1\|1011895_1012459_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK11449.1\|1012499_1013357_+	ABC transporter permease	NA	NA	NA	NA
AXK08824.1\|1013364_1014114_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.2e-29	33.5
AXK08825.1\|1014135_1015008_+	hypothetical protein	NA	NA	NA	NA
AXK08826.1\|1015036_1015816_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK08827.1\|1015849_1016647_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK08828.1\|1018098_1019271_+	hypothetical protein	A0A2H4PQU7	Staphylococcus_phage	1.1e-59	39.6
AXK08829.1\|1019301_1019694_+	RidA family protein	NA	NA	NA	NA
AXK08830.1\|1019687_1020548_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK08831.1\|1020551_1021514_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK11450.1\|1022290_1022980_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.8e-12	28.8
AXK08832.1\|1023840_1024791_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08833.1\|1025139_1026009_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08834.1\|1026079_1026775_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AXK08835.1\|1026764_1027274_+	nucleoside deaminase	NA	NA	NA	NA
AXK08836.1\|1027270_1028491_+	MFS transporter	NA	NA	NA	NA
AXK08837.1\|1028438_1029341_-	transcriptional regulator GcvA	NA	NA	NA	NA
AXK08838.1\|1030226_1031513_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08839.1\|1031551_1032925_+	amidase	NA	NA	NA	NA
AXK08840.1\|1032963_1033665_-	riboflavin synthase	NA	NA	NA	NA
AXK08841.1\|1033963_1034953_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08842.1\|1035053_1035515_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK08843.1\|1035530_1036079_-	cysteine dioxygenase	NA	NA	NA	NA
AXK08844.1\|1036220_1037696_-	long-chain fatty acid--CoA ligase	Q75ZG1	Hepacivirus	3.0e-35	25.6
AXK08845.1\|1037801_1038893_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AXK08846.1\|1038896_1039679_-	ABC transporter permease	NA	NA	NA	NA
AXK08847.1\|1039688_1040477_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-33	40.0
AXK08848.1\|1041602_1042037_-	PaaI family thioesterase	NA	NA	NA	NA
AXK08849.1\|1042033_1043044_-	alcohol dehydrogenase	NA	NA	NA	NA
AXK08850.1\|1043087_1044014_-	VOC family protein	NA	NA	NA	NA
AXK08851.1\|1044300_1044669_+	DUF861 domain-containing protein	NA	NA	NA	NA
AXK11451.1\|1044884_1045835_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11452.1\|1045816_1048306_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-86	33.8
AXK08852.1\|1048354_1049047_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.7e-07	29.9
AXK08853.1\|1049119_1050319_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
AXK08854.1\|1050336_1051242_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08855.1\|1051357_1052287_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK11453.1\|1052312_1053659_+	MFS transporter	NA	NA	NA	NA
AXK11454.1\|1053686_1054436_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	1.2e-11	26.4
AXK08856.1\|1054449_1055232_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK08857.1\|1055424_1056375_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08858.1\|1056436_1057582_-	porin	NA	NA	NA	NA
AXK08859.1\|1058058_1058895_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	1.6e-33	33.3
AXK08860.1\|1058964_1059930_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08861.1\|1059926_1060877_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08862.1\|1061261_1061804_+	hypothetical protein	NA	NA	NA	NA
AXK08863.1\|1062839_1063790_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08864.1\|1064031_1064400_+	hypothetical protein	NA	NA	NA	NA
AXK08865.1\|1064445_1065570_+	hypothetical protein	NA	NA	NA	NA
AXK11455.1\|1066704_1067445_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK08866.1\|1067548_1068169_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK08867.1\|1068271_1069222_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08868.1\|1069218_1071327_-	AsmA family protein	NA	NA	NA	NA
AXK08869.1\|1071471_1072131_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
AXK11456.1\|1072162_1072627_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA
AXK08870.1\|1072902_1073088_+	hypothetical protein	NA	NA	NA	NA
AXK08871.1\|1073139_1073892_-	DNA-binding protein	NA	NA	NA	NA
AXK08872.1\|1073898_1075161_-	extracellular solute-binding protein	NA	NA	NA	NA
AXK08873.1\|1075202_1076441_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08874.1\|1077517_1078645_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-23	32.3
AXK08875.1\|1078655_1079483_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK08876.1\|1079469_1080336_-	sugar ABC transporter permease	NA	NA	NA	NA
AXK08877.1\|1081702_1082107_-	hypothetical protein	NA	NA	NA	NA
AXK08878.1\|1082198_1083149_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11457.1\|1083517_1084429_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK08879.1\|1084443_1085154_+	FadR family transcriptional regulator	NA	NA	NA	NA
AXK08880.1\|1085150_1086395_+	DUF521 domain-containing protein	NA	NA	NA	NA
AXK08881.1\|1086396_1086831_+	DUF126 domain-containing protein	NA	NA	NA	NA
AXK08882.1\|1086859_1087165_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXK08883.1\|1087262_1088213_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08884.1\|1088269_1089418_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AXK08885.1\|1089498_1090449_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08886.1\|1090979_1091777_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08887.1\|1091824_1092478_-	ABC transporter permease	NA	NA	NA	NA
AXK08888.1\|1092434_1093523_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	8.7e-32	36.4
AXK08889.1\|1093687_1095913_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
AXK08890.1\|1098190_1099087_+	inositol monophosphatase	NA	NA	NA	NA
AXK08891.1\|1099206_1100157_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08892.1\|1100153_1101845_-	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	9.4e-33	28.1
AXK08893.1\|1101906_1103103_+	amidohydrolase	NA	NA	NA	NA
AXK08894.1\|1103116_1103995_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK08895.1\|1104101_1105148_+	YeiH family putative sulfate export transporter	NA	NA	NA	NA
AXK08896.1\|1105211_1105622_+	acyl-CoA thioesterase	NA	NA	NA	NA
AXK08897.1\|1105632_1107105_+	magnesium transporter	NA	NA	NA	NA
AXK08898.1\|1107300_1108251_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1130542 : 1201508

uncultured_Mediterranean_phage(25.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK08921.1\|1130542_1131493_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08922.1\|1131549_1132662_+	Ldh family oxidoreductase	NA	NA	NA	NA
AXK08923.1\|1135045_1135996_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08924.1\|1136585_1137362_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
AXK08925.1\|1137479_1137743_-	30S ribosomal protein S20	NA	NA	NA	NA
AXK08926.1\|1137843_1138848_-	DUF4880 domain-containing protein	NA	NA	NA	NA
AXK08927.1\|1139048_1140650_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
AXK08928.1\|1140675_1141434_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
AXK08929.1\|1141525_1142182_-	adenylate kinase	NA	NA	NA	NA
AXK08930.1\|1142272_1143037_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AXK08931.1\|1143046_1143235_-	Trm112 family protein	NA	NA	NA	NA
AXK08932.1\|1143290_1144334_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AXK08933.1\|1144330_1144744_-	biopolymer transporter ExbD	NA	NA	NA	NA
AXK08934.1\|1144740_1145361_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
AXK08935.1\|1145640_1146591_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08936.1\|1146758_1148150_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.4e-29	32.0
AXK08937.1\|1148222_1148801_+	superoxide dismutase [Fe]	NA	NA	NA	NA
AXK08938.1\|1148917_1150315_+	chloride channel protein EriC	NA	NA	NA	NA
AXK08939.1\|1150430_1151636_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
AXK08940.1\|1151735_1152254_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.1e-14	42.2
AXK08941.1\|1152348_1152594_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
AXK08942.1\|1152821_1153136_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-10	43.8
AXK08943.1\|1153225_1158415_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
AXK11459.1\|1158411_1160580_+	penicillin-binding protein 1C	NA	NA	NA	NA
AXK08944.1\|1160599_1162951_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-164	41.9
AXK08945.1\|1162955_1164275_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA
AXK08946.1\|1164293_1165967_+	MCE family protein	NA	NA	NA	NA
AXK08947.1\|1165971_1166640_+	lipoprotein	NA	NA	NA	NA
AXK08948.1\|1166796_1170618_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK08949.1\|1170948_1171899_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08950.1\|1171920_1173066_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK08951.1\|1173214_1174144_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK08952.1\|1174140_1175229_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
AXK08953.1\|1175225_1176029_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.9e-14	23.5
AXK08954.1\|1176025_1176757_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-12	31.0
AXK08955.1\|1176814_1178104_-	MFS transporter	NA	NA	NA	NA
AXK08956.1\|1178200_1178803_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK08957.1\|1183356_1183695_-	P-II family nitrogen regulator	NA	NA	NA	NA
AXK08958.1\|1184363_1184669_+	hypothetical protein	NA	NA	NA	NA
AXK08959.1\|1186374_1187325_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08960.1\|1187321_1188653_-	MFS transporter	NA	NA	NA	NA
AXK08961.1\|1189892_1191914_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
AXK08962.1\|1191906_1192548_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
AXK08963.1\|1192544_1192952_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
AXK08964.1\|1192948_1193749_+	SURF1 family protein	NA	NA	NA	NA
AXK08965.1\|1193823_1194528_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK08966.1\|1194559_1195354_+	N-formylglutamate deformylase	NA	NA	NA	NA
AXK08967.1\|1195350_1196301_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK08968.1\|1196398_1197349_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK08969.1\|1197446_1197881_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
AXK08970.1\|1197963_1200300_+	copper-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.2e-124	42.8
AXK11460.1\|1200491_1201508_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA

DBSCAN-SWA_11

1248900 : 1329770

Bacillus_virus(25.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09009.1\|1248900_1249851_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK09010.1\|1249847_1250798_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09011.1\|1251057_1252086_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXK09012.1\|1252165_1253464_-	TRAP transporter large permease	NA	NA	NA	NA
AXK09013.1\|1253460_1254042_-	TRAP transporter small permease	NA	NA	NA	NA
AXK09014.1\|1254354_1258401_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	6.3e-160	67.4
AXK09015.1\|1258641_1266303_+	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	7.3e-24	30.9
AXK09016.1\|1266299_1267250_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09017.1\|1268388_1268862_-	MarR family transcriptional regulator	NA	NA	NA	NA
AXK09018.1\|1269001_1269622_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXK09019.1\|1269757_1270558_+	aldolase	NA	NA	NA	NA
AXK09020.1\|1270612_1271704_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09021.1\|1271725_1272169_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
AXK09022.1\|1272197_1272830_-	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA
AXK09023.1\|1272940_1273357_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXK09024.1\|1273349_1274042_+	DUF2238 domain-containing protein	NA	NA	NA	NA
AXK09025.1\|1274148_1274523_+	hypothetical protein	NA	NA	NA	NA
AXK09026.1\|1274599_1275409_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK09027.1\|1275504_1276449_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
AXK09028.1\|1276487_1277459_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09029.1\|1277549_1277987_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
AXK09030.1\|1278045_1278927_-	NRDE family protein	NA	NA	NA	NA
AXK09031.1\|1279930_1280791_+	amidohydrolase	NA	NA	NA	NA
AXK09032.1\|1280823_1282206_+	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	7.9e-30	28.4
AXK11465.1\|1282202_1283222_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09033.1\|1283594_1284089_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK09034.1\|1284096_1284837_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK09035.1\|1284917_1286522_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
AXK09036.1\|1286561_1287371_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	1.6e-22	30.4
AXK09037.1\|1287475_1289641_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-14	28.1
AXK09038.1\|1290521_1291334_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
AXK09039.1\|1291346_1291655_+	hypothetical protein	NA	NA	NA	NA
AXK09040.1\|1291772_1293503_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09041.1\|1293504_1294650_-	hypothetical protein	NA	NA	NA	NA
AXK09042.1\|1294779_1295448_-	DUF502 domain-containing protein	NA	NA	NA	NA
AXK09043.1\|1295569_1296037_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK09044.1\|1296172_1297555_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA
AXK09045.1\|1297551_1298676_+	DNA repair exonuclease	NA	NA	NA	NA
AXK09046.1\|1298672_1301309_+	GTP-binding protein	NA	NA	NA	NA
AXK09047.1\|1301723_1302674_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09048.1\|1306420_1307032_-	DUF2239 family protein	NA	NA	NA	NA
AXK09049.1\|1307254_1308715_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.6e-97	41.3
AXK09050.1\|1308811_1310404_+	GMP synthase (glutamine-hydrolyzing)	A0A1V0SH76	Hokovirus	1.0e-17	33.3
AXK09051.1\|1310390_1310669_+	hypothetical protein	NA	NA	NA	NA
AXK09052.1\|1310727_1311015_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXK09053.1\|1311016_1312357_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
AXK09054.1\|1312452_1313142_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK09055.1\|1313154_1314585_+	MFS transporter	NA	NA	NA	NA
AXK09056.1\|1316309_1317131_+	IclR family transcriptional regulator	NA	NA	NA	NA
AXK09057.1\|1317141_1318713_+	amidohydrolase	NA	NA	NA	NA
AXK09058.1\|1318741_1319719_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09059.1\|1319745_1320549_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-30	38.2
AXK09060.1\|1320545_1321340_+	ABC transporter permease	NA	NA	NA	NA
AXK09061.1\|1321347_1322583_+	DUF521 domain-containing protein	NA	NA	NA	NA
AXK09062.1\|1322575_1323010_+	DUF126 domain-containing protein	NA	NA	NA	NA
AXK09063.1\|1323758_1324709_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09064.1\|1325330_1327058_-	STAS domain-containing protein	NA	NA	NA	NA
AXK09065.1\|1327169_1328528_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXK09066.1\|1328819_1329770_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

1774661 : 1838431

Lake_Baikal_phage(18.18%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09447.1\|1774661_1775612_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09448.1\|1775760_1776099_-	BON domain-containing protein	NA	NA	NA	NA
AXK09449.1\|1776156_1776318_-	DUF1328 domain-containing protein	NA	NA	NA	NA
AXK09450.1\|1776349_1776550_-	CsbD family protein	NA	NA	NA	NA
AXK09451.1\|1776815_1779389_-	cyanophycin synthetase	NA	NA	NA	NA
AXK09452.1\|1779459_1782033_-	cyanophycin synthetase	NA	NA	NA	NA
AXK09453.1\|1784559_1785048_+	DUF1854 domain-containing protein	NA	NA	NA	NA
AXK09454.1\|1785139_1786291_-	N-acetyltransferase	NA	NA	NA	NA
AXK09455.1\|1786344_1787166_+	DUF455 family protein	NA	NA	NA	NA
AXK09456.1\|1787204_1788434_+	lytic murein transglycosylase	NA	NA	NA	NA
AXK09457.1\|1788562_1789003_+	DUF937 domain-containing protein	NA	NA	NA	NA
AXK09458.1\|1788947_1789127_+	hypothetical protein	NA	NA	NA	NA
AXK09459.1\|1789113_1790064_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09460.1\|1790060_1790534_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK09461.1\|1790695_1791634_+	hypothetical protein	NA	NA	NA	NA
AXK09462.1\|1791635_1792844_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.8e-36	30.0
AXK09463.1\|1792948_1793455_-	lipoprotein signal peptidase	NA	NA	NA	NA
AXK09464.1\|1793457_1796319_-\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	1.0e-71	25.5
AXK09465.1\|1796308_1797274_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
AXK09466.1\|1797333_1799328_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.4e-21	33.3
AXK09467.1\|1799425_1800376_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09468.1\|1800372_1800747_-	hypothetical protein	NA	NA	NA	NA
AXK09469.1\|1801008_1802217_+	acyl-CoA desaturase	NA	NA	NA	NA
AXK09470.1\|1802213_1804514_+	DNA helicase II	A7KV33	Bacillus_phage	9.9e-110	35.9
AXK09471.1\|1804566_1807179_-	TonB-dependent receptor	NA	NA	NA	NA
AXK09472.1\|1807538_1809464_-	ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	1.1e-66	31.8
AXK09473.1\|1809460_1810357_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
AXK09474.1\|1810363_1811503_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AXK09475.1\|1811502_1812324_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
AXK09476.1\|1813894_1814224_-	DUF4148 domain-containing protein	NA	NA	NA	NA
AXK09477.1\|1814606_1815863_+	autotransporter Phg	NA	NA	NA	NA
AXK09478.1\|1815937_1816219_+	hypothetical protein	NA	NA	NA	NA
AXK09479.1\|1816260_1816581_+	hypothetical protein	NA	NA	NA	NA
AXK09480.1\|1816887_1817091_+	cold-shock protein CspA	A0A2H4N7Y6	Lake_Baikal_phage	1.6e-16	62.1
AXK09481.1\|1817174_1817741_+	DUF924 family protein	NA	NA	NA	NA
AXK09482.1\|1818086_1818287_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	7.4e-14	64.4
AXK09483.1\|1818398_1818977_-	TIGR00645 family protein	K4K6D8	Caulobacter_phage	1.0e-23	33.7
AXK09484.1\|1819155_1820466_+	trigger factor	NA	NA	NA	NA
AXK09485.1\|1820468_1821122_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	6.8e-56	57.5
AXK09486.1\|1821226_1822531_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.2e-129	53.8
AXK09487.1\|1822719_1825173_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-220	52.0
AXK09488.1\|1825296_1826247_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09489.1\|1826474_1827698_+	CoA transferase	NA	NA	NA	NA
AXK09490.1\|1827763_1828735_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09491.1\|1828747_1829203_+	MaoC family dehydratase	NA	NA	NA	NA
AXK09492.1\|1829216_1830020_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK09493.1\|1830016_1830448_+	hypothetical protein	NA	NA	NA	NA
AXK09494.1\|1830444_1831602_+	thiolase	NA	NA	NA	NA
AXK09495.1\|1831623_1832400_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK09496.1\|1834564_1835281_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
AXK09497.1\|1835273_1835915_+	CoA transferase subunit B	NA	NA	NA	NA
AXK09498.1\|1835949_1836681_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09499.1\|1836698_1836911_+	hypothetical protein	NA	NA	NA	NA
AXK09500.1\|1837480_1838431_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_13

1851624 : 1910891

Klosneuvirus(40.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09514.1\|1851624_1852575_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09515.1\|1852698_1853508_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK09516.1\|1853707_1854658_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09517.1\|1855931_1857149_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA
AXK09518.1\|1858205_1859108_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK09519.1\|1859184_1860057_+	MOSC domain-containing protein	NA	NA	NA	NA
AXK09520.1\|1860187_1860556_+	aspartate 1-decarboxylase	NA	NA	NA	NA
AXK09521.1\|1860613_1861660_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AXK09522.1\|1861855_1863112_+	D-amino acid dehydrogenase	NA	NA	NA	NA
AXK09523.1\|1863116_1864454_+	extracellular solute-binding protein	NA	NA	NA	NA
AXK09524.1\|1864603_1865560_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09525.1\|1865662_1866595_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA
AXK09526.1\|1866710_1867031_+	hypothetical protein	NA	NA	NA	NA
AXK09527.1\|1867032_1867383_+	hypothetical protein	NA	NA	NA	NA
AXK09528.1\|1867430_1869005_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09529.1\|1869057_1870002_+	ABC transporter permease	NA	NA	NA	NA
AXK09530.1\|1870019_1870850_+	ABC transporter permease	NA	NA	NA	NA
AXK09531.1\|1870842_1872477_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-18	32.7
AXK09532.1\|1872473_1873829_+	amidase	NA	NA	NA	NA
AXK09533.1\|1874735_1876313_+	lipoprotein	NA	NA	NA	NA
AXK09534.1\|1876316_1877591_+	hypothetical protein	NA	NA	NA	NA
AXK11487.1\|1877688_1878063_+	hypothetical protein	NA	NA	NA	NA
AXK09535.1\|1879778_1880912_+	general secretion pathway protein	NA	NA	NA	NA
AXK09536.1\|1880949_1881555_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
AXK09537.1\|1881551_1882370_+	hypothetical protein	NA	NA	NA	NA
AXK09538.1\|1882441_1885066_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.7e-81	39.4
AXK09539.1\|1885052_1885307_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
AXK09540.1\|1885373_1885955_-	hypothetical protein	NA	NA	NA	NA
AXK09541.1\|1886258_1886519_+	30S ribosomal protein S16	NA	NA	NA	NA
AXK09542.1\|1886684_1887308_+	ribosome maturation factor RimM	NA	NA	NA	NA
AXK09543.1\|1887307_1888081_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXK09544.1\|1888077_1889286_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
AXK09545.1\|1889311_1889785_-	RidA family protein	NA	NA	NA	NA
AXK09546.1\|1889858_1890809_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09547.1\|1890907_1891858_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09548.1\|1891955_1893305_-	two-component sensor histidine kinase	NA	NA	NA	NA
AXK09549.1\|1894070_1894826_+	MipA/OmpV family protein	NA	NA	NA	NA
AXK09550.1\|1894918_1897801_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-138	37.1
AXK09551.1\|1898123_1898549_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.1e-21	43.2
AXK09552.1\|1898576_1899725_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
AXK09553.1\|1899721_1900228_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK09554.1\|1900234_1901530_+	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AXK09555.1\|1901570_1902875_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
AXK09556.1\|1902876_1903515_+	hypothetical protein	NA	NA	NA	NA
AXK09557.1\|1903517_1904678_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
AXK09558.1\|1904704_1906060_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
AXK09559.1\|1906063_1907134_+	histidinol-phosphate aminotransferase 1	A0A1X6WGT4	Pacmanvirus	2.5e-15	25.7
AXK09560.1\|1907272_1907509_+	RNA-binding protein Hfq	NA	NA	NA	NA
AXK09561.1\|1907596_1908703_+	GTPase HflX	NA	NA	NA	NA
AXK09562.1\|1908668_1909973_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
AXK09563.1\|1909991_1910891_+\|protease	protease modulator HflC	NA	NA	NA	NA

DBSCAN-SWA_14

1921131 : 1964402

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09571.1\|1921131_1922082_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09572.1\|1922068_1922269_-	hypothetical protein	NA	NA	NA	NA
AXK09573.1\|1922281_1923367_+	AI-2E family transporter	NA	NA	NA	NA
AXK09574.1\|1923382_1924144_-	ABC transporter permease	NA	NA	NA	NA
AXK09575.1\|1924140_1925064_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-23	33.6
AXK09576.1\|1925162_1925687_-	N-acetyltransferase	NA	NA	NA	NA
AXK09577.1\|1925695_1926439_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
AXK09578.1\|1926534_1926774_-	hypothetical protein	NA	NA	NA	NA
AXK09579.1\|1926787_1926940_-	lipoprotein	NA	NA	NA	NA
AXK09580.1\|1927025_1928516_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
AXK09581.1\|1928607_1929546_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA
AXK09582.1\|1929542_1929719_-	CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone	NA	NA	NA	NA
AXK09583.1\|1929721_1930384_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA
AXK11489.1\|1932005_1932149_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA
AXK09584.1\|1932145_1933120_-	hypothetical protein	NA	NA	NA	NA
AXK09585.1\|1933286_1934237_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09586.1\|1934233_1935508_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	9.6e-14	28.9
AXK09587.1\|1935605_1936805_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
AXK09588.1\|1936801_1937455_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK09589.1\|1937451_1938888_+	dethiobiotin synthase	NA	NA	NA	NA
AXK09590.1\|1938875_1939235_+	CidA/LrgA family protein	NA	NA	NA	NA
AXK09591.1\|1940206_1941157_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09592.1\|1941254_1942205_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09593.1\|1942201_1944067_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
AXK11490.1\|1944324_1945845_+	aldehyde dehydrogenase	NA	NA	NA	NA
AXK09594.1\|1945932_1946583_-	flavodoxin family protein	NA	NA	NA	NA
AXK09595.1\|1947531_1948827_+	DUF445 domain-containing protein	NA	NA	NA	NA
AXK09596.1\|1948848_1949733_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK11491.1\|1949831_1950707_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AXK09597.1\|1950696_1951053_-	DUF1428 domain-containing protein	NA	NA	NA	NA
AXK09598.1\|1951126_1952158_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK09599.1\|1952287_1952467_-	DUF3008 family protein	NA	NA	NA	NA
AXK09600.1\|1952564_1953089_+	DUF302 domain-containing protein	NA	NA	NA	NA
AXK09601.1\|1953099_1953936_-	alpha/beta hydrolase	NA	NA	NA	NA
AXK09602.1\|1954048_1954420_+	transcriptional regulator	NA	NA	NA	NA
AXK09603.1\|1954416_1954968_+	ATPase	NA	NA	NA	NA
AXK09604.1\|1954983_1956675_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	5.0e-42	27.3
AXK09605.1\|1956723_1957404_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK09606.1\|1957651_1958116_-	hypothetical protein	NA	NA	NA	NA
AXK09607.1\|1958285_1959215_+	ZIP family metal transporter	NA	NA	NA	NA
AXK09608.1\|1959227_1959875_-	hypothetical protein	NA	NA	NA	NA
AXK09609.1\|1959948_1961766_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-37	27.4
AXK09610.1\|1961849_1962800_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09611.1\|1963451_1964402_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1994178 : 2058543

Vibrio_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09639.1\|1994178_1995129_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09640.1\|1995349_1996300_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09641.1\|1996397_1997363_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09642.1\|1997500_1998400_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09643.1\|2000994_2002482_+	hypothetical protein	NA	NA	NA	NA
AXK09644.1\|2002492_2003689_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
AXK09645.1\|2003761_2005081_+	phenylacetate--CoA ligase family protein	NA	NA	NA	NA
AXK09646.1\|2005077_2005953_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK09647.1\|2005983_2007153_-	CoA transferase	NA	NA	NA	NA
AXK09648.1\|2007149_2007464_-	ferredoxin	NA	NA	NA	NA
AXK09649.1\|2007485_2008208_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK09650.1\|2008207_2009026_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK09651.1\|2009030_2009558_-	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA
AXK09652.1\|2009563_2010829_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
AXK09653.1\|2011178_2012318_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09654.1\|2012395_2013268_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK09655.1\|2014137_2015088_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09656.1\|2015047_2015683_-	hypothetical protein	NA	NA	NA	NA
AXK09657.1\|2016042_2017365_-	isocitrate lyase	NA	NA	NA	NA
AXK09658.1\|2017593_2018505_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	5.9e-42	37.6
AXK09659.1\|2019929_2020502_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
AXK09660.1\|2020541_2022371_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
AXK09661.1\|2022333_2023392_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
AXK09662.1\|2023429_2023891_-	holo-ACP synthase	NA	NA	NA	NA
AXK09663.1\|2023975_2024722_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AXK09664.1\|2026212_2029443_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK09665.1\|2029509_2030841_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK09666.1\|2031093_2031468_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK09667.1\|2031570_2032749_-	patatin-like phospholipase family protein	NA	NA	NA	NA
AXK09668.1\|2032759_2033350_-	DUF4136 domain-containing protein	NA	NA	NA	NA
AXK11495.1\|2033460_2034267_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09669.1\|2034292_2035087_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	5.1e-05	25.7
AXK09670.1\|2036087_2037062_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK11496.1\|2037220_2037733_-	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-43	52.3
AXK09671.1\|2037889_2038861_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09672.1\|2040605_2041412_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK11497.1\|2041408_2042545_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
AXK09673.1\|2042660_2043425_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK09674.1\|2043538_2044309_-	spermidine synthase	NA	NA	NA	NA
AXK09675.1\|2044393_2045605_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AXK09676.1\|2045653_2046028_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AXK09677.1\|2046128_2047391_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.8e-28	36.6
AXK09678.1\|2047387_2048245_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
AXK09679.1\|2048417_2049419_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09680.1\|2049870_2050821_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09681.1\|2052335_2053535_+	MFS transporter	NA	NA	NA	NA
AXK09682.1\|2053903_2054140_+	50S ribosomal protein L28	NA	NA	NA	NA
AXK09683.1\|2054203_2054371_+	50S ribosomal protein L33	NA	NA	NA	NA
AXK09684.1\|2054484_2056380_-	STAS domain-containing protein	A0A2H4J153	uncultured_Caudovirales_phage	2.3e-19	27.5
AXK09685.1\|2056543_2057494_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09686.1\|2057592_2058543_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_16

2183998 : 2268545

Moraxella_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK11503.1\|2183998_2185015_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK09786.1\|2185408_2186701_-	aspartate kinase	NA	NA	NA	NA
AXK09787.1\|2186773_2187808_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AXK09788.1\|2187868_2188819_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09789.1\|2188916_2189882_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
AXK09790.1\|2189918_2190563_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
AXK09791.1\|2190582_2192043_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.5e-34	27.9
AXK09792.1\|2192282_2192966_+	tetratricopeptide repeat protein	NA	NA	NA	NA
AXK11504.1\|2193094_2193604_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
AXK09793.1\|2193596_2194373_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
AXK09794.1\|2194580_2195444_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
AXK09795.1\|2195468_2197055_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	1.9e-35	42.0
AXK09796.1\|2197181_2197964_-	inositol monophosphatase	NA	NA	NA	NA
AXK09797.1\|2198071_2198848_+	RNA methyltransferase	NA	NA	NA	NA
AXK09798.1\|2199065_2200058_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09799.1\|2200159_2200978_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXK09800.1\|2200991_2201825_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
AXK09801.1\|2201930_2202881_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09802.1\|2202985_2204017_+	peptidase C45	NA	NA	NA	NA
AXK09803.1\|2204030_2207654_-	5-oxoprolinase	NA	NA	NA	NA
AXK09804.1\|2207732_2208245_-	transcriptional regulator	NA	NA	NA	NA
AXK09805.1\|2209419_2210121_+	hypothetical protein	NA	NA	NA	NA
AXK09806.1\|2210141_2211107_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09807.1\|2211120_2211612_+	TRAP transporter small permease	NA	NA	NA	NA
AXK09808.1\|2213057_2214143_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09809.1\|2214149_2214650_+	TRAP transporter small permease	NA	NA	NA	NA
AXK09810.1\|2215967_2217722_-	filamentous hemagglutinin transporter protein FhaC	NA	NA	NA	NA
AXK11505.1\|2217714_2218812_-	type 1 fimbrial protein	NA	NA	NA	NA
AXK09811.1\|2218825_2221447_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AXK09812.1\|2221509_2222334_-	molecular chaperone	NA	NA	NA	NA
AXK09813.1\|2222493_2222931_-	protein FimA	NA	NA	NA	NA
AXK09814.1\|2223006_2233779_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	3.6e-29	32.5
AXK09815.1\|2234205_2234835_+	DNA-binding response regulator	NA	NA	NA	NA
AXK09816.1\|2234843_2238560_+	hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	4.2e-33	32.0
AXK09817.1\|2238603_2239479_-	EAL domain-containing protein	NA	NA	NA	NA
AXK09818.1\|2239612_2240446_-	putative hydro-lyase	NA	NA	NA	NA
AXK09819.1\|2240464_2241814_-	amidase	NA	NA	NA	NA
AXK09820.1\|2244999_2245950_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09821.1\|2246066_2246786_+	FadR family transcriptional regulator	NA	NA	NA	NA
AXK09822.1\|2246958_2247945_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09823.1\|2247945_2248428_+	TRAP transporter small permease	NA	NA	NA	NA
AXK09824.1\|2248431_2249715_+	TRAP transporter large permease	NA	NA	NA	NA
AXK09825.1\|2249711_2250650_+	CoA ester lyase	NA	NA	NA	NA
AXK09826.1\|2250646_2252356_+	thiamine pyrophosphate-binding protein	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.9e-35	27.3
AXK09827.1\|2252365_2253613_+	Zn-dependent hydrolase	NA	NA	NA	NA
AXK11506.1\|2255223_2256513_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AXK09828.1\|2257650_2258424_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	37.7
AXK09829.1\|2259085_2259829_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09830.1\|2259903_2260644_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK09831.1\|2260839_2261676_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
AXK09832.1\|2261726_2262497_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AXK09833.1\|2262546_2263599_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
AXK09834.1\|2263595_2264222_-	thymidylate kinase	A0A1L2BX49	Bacteriophage	1.6e-22	35.1
AXK09835.1\|2264218_2265265_-	endolytic transglycosylase MltG	NA	NA	NA	NA
AXK09836.1\|2265431_2266448_+	folate-binding protein	NA	NA	NA	NA
AXK09837.1\|2266546_2267497_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11507.1\|2267594_2268545_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2275017 : 2345035

Bacillus_virus(16.67%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09842.1\|2275017_2275968_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09843.1\|2276952_2277726_-	ABC transporter permease	NA	NA	NA	NA
AXK09844.1\|2277722_2278721_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09845.1\|2278805_2279582_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-30	34.2
AXK09846.1\|2279737_2281405_-	ABC-F family ATPase	A0A1V0SKJ1	Klosneuvirus	1.6e-53	28.9
AXK09847.1\|2281722_2282916_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXK09848.1\|2282903_2283527_+	hypothetical protein	NA	NA	NA	NA
AXK09849.1\|2283523_2285425_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA
AXK09850.1\|2285473_2286268_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK09851.1\|2286280_2287282_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA
AXK09852.1\|2287278_2287785_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	3.4e-07	38.4
AXK09853.1\|2287777_2288626_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AXK09854.1\|2288723_2289266_-	hypothetical protein	NA	NA	NA	NA
AXK09855.1\|2289309_2290260_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09856.1\|2290414_2290741_-	cation:proton antiporter	NA	NA	NA	NA
AXK09857.1\|2290737_2291022_-	K+/H+ antiporter subunit F	NA	NA	NA	NA
AXK09858.1\|2291018_2291498_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA
AXK09859.1\|2291494_2293123_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA
AXK09860.1\|2293119_2293464_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA
AXK09861.1\|2293463_2296397_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA
AXK09862.1\|2297555_2298506_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11508.1\|2298604_2298901_-	hypothetical protein	NA	NA	NA	NA
AXK09863.1\|2299007_2299925_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09864.1\|2299929_2300643_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK09865.1\|2300656_2301628_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09866.1\|2303347_2303728_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXK09867.1\|2303731_2304919_+	MFS transporter	NA	NA	NA	NA
AXK11509.1\|2305357_2306080_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.3e-87	68.2
AXK09868.1\|2306372_2307323_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09869.1\|2307319_2307748_-	hypothetical protein	NA	NA	NA	NA
AXK11510.1\|2309149_2310112_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09870.1\|2310227_2311181_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09871.1\|2311190_2312183_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09872.1\|2312234_2312990_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK09873.1\|2313054_2313744_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK09874.1\|2313965_2314916_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
AXK09875.1\|2314946_2316143_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AXK11511.1\|2316139_2316913_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK11512.1\|2316980_2317952_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09876.1\|2318037_2318982_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09877.1\|2318959_2319829_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
AXK11513.1\|2320072_2320696_+	glutathione S-transferase	NA	NA	NA	NA
AXK09878.1\|2321010_2321310_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK09879.1\|2321323_2324398_-	autotransporter SphB2	NA	NA	NA	NA
AXK09880.1\|2324527_2325202_+	DNA-binding response regulator	NA	NA	NA	NA
AXK09881.1\|2325194_2327009_+	histidine kinase	NA	NA	NA	NA
AXK09882.1\|2327062_2328010_-	hypothetical protein	NA	NA	NA	NA
AXK09883.1\|2328113_2329064_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09884.1\|2329616_2331242_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	2.0e-149	52.2
AXK11514.1\|2331291_2332326_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
AXK09885.1\|2332328_2333675_-	hypothetical protein	NA	NA	NA	NA
AXK11515.1\|2333671_2335186_-	VWA domain-containing protein	NA	NA	NA	NA
AXK09886.1\|2335176_2336187_-	VWA domain-containing protein	NA	NA	NA	NA
AXK09887.1\|2336660_2337602_-	DUF58 domain-containing protein	NA	NA	NA	NA
AXK09888.1\|2337610_2338579_-	AAA family ATPase	NA	NA	NA	NA
AXK09889.1\|2340118_2341087_+	transporter	NA	NA	NA	NA
AXK09890.1\|2341264_2342254_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK09891.1\|2342300_2343059_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK09892.1\|2343248_2343986_+	TerC family protein	A0A0S4KZH7	Pseudomonas_phage	4.1e-41	46.6
AXK09893.1\|2344084_2345035_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2389092 : 2442204

Ectocarpus_siliculosus_virus(11.11%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09924.1\|2389092_2390043_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09925.1\|2390062_2390968_-	pirin family protein	NA	NA	NA	NA
AXK09926.1\|2391045_2391744_-	pirin family protein	NA	NA	NA	NA
AXK09927.1\|2391903_2392848_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09928.1\|2392857_2394348_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA
AXK09929.1\|2394344_2395412_-	PAS domain-containing sensor histidine kinase	Q8QKV7	Ectocarpus_siliculosus_virus	1.1e-05	23.5
AXK09930.1\|2395475_2396888_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
AXK09931.1\|2397073_2398294_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA
AXK09932.1\|2398315_2399266_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09933.1\|2399364_2400015_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
AXK09934.1\|2400132_2401935_+	EAL domain-containing protein	NA	NA	NA	NA
AXK09935.1\|2401812_2403552_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-10	27.1
AXK09936.1\|2403586_2404492_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK09937.1\|2404673_2406050_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK09938.1\|2406216_2406957_-	ribonuclease PH	NA	NA	NA	NA
AXK09939.1\|2407093_2408020_+	YicC family protein	NA	NA	NA	NA
AXK09940.1\|2408292_2408448_+	hypothetical protein	NA	NA	NA	NA
AXK09941.1\|2408460_2408589_+	hypothetical protein	NA	NA	NA	NA
AXK09942.1\|2408585_2408870_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK09943.1\|2408928_2410419_-	AMP nucleosidase	NA	NA	NA	NA
AXK09944.1\|2410663_2411263_+	NlpC/P60 family protein	A0A0A8WF62	Clostridium_phage	1.4e-20	41.6
AXK09945.1\|2411267_2412038_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK09946.1\|2412275_2412989_+	cytochrome C	NA	NA	NA	NA
AXK09947.1\|2412985_2413903_+	cytochrome C	NA	NA	NA	NA
AXK09948.1\|2414023_2414671_+	guanylate kinase	A0A218KC48	Bacillus_phage	3.1e-13	33.9
AXK09949.1\|2414712_2414916_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
AXK09950.1\|2414940_2417220_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	5.9e-06	32.1
AXK09951.1\|2417232_2417961_-	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	3.3e-35	39.3
AXK09952.1\|2417957_2418617_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
AXK09953.1\|2418685_2419438_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
AXK09954.1\|2419619_2420570_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09955.1\|2421461_2422367_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
AXK09956.1\|2422378_2423506_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
AXK09957.1\|2423594_2424209_-	fimbrial protein	NA	NA	NA	NA
AXK09958.1\|2424867_2426055_-	cupin domain-containing protein	NA	NA	NA	NA
AXK11518.1\|2426051_2428649_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	1.5e-21	22.6
AXK09959.1\|2428903_2429119_+	dodecin domain-containing protein	NA	NA	NA	NA
AXK09960.1\|2429574_2430129_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	1.7e-15	32.0
AXK09961.1\|2430396_2430957_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXK09962.1\|2431068_2432373_+	peptidase	NA	NA	NA	NA
AXK09963.1\|2432369_2433881_+	thiol oxidoreductase	NA	NA	NA	NA
AXK09964.1\|2433986_2434988_+	aminopeptidase	NA	NA	NA	NA
AXK09965.1\|2434968_2436090_+	DUF1513 domain-containing protein	NA	NA	NA	NA
AXK09966.1\|2436187_2437138_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09967.1\|2437134_2437761_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
AXK11519.1\|2437826_2438672_+	hypothetical protein	A0A1I9SA48	Rhodococcus_phage	7.0e-37	35.3
AXK09968.1\|2438775_2439375_+	hypothetical protein	NA	NA	NA	NA
AXK09969.1\|2439371_2440136_+	DUF1828 domain-containing protein	NA	NA	NA	NA
AXK09970.1\|2440205_2441156_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09971.1\|2441253_2442204_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2455512 : 2507877

Planktothrix_phage(15.38%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK09979.1\|2455512_2456463_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK09980.1\|2456560_2456962_-	aryl-sulfate sulfotransferase	NA	NA	NA	NA
AXK09981.1\|2457034_2457613_-\|protease	protease	NA	NA	NA	NA
AXK11520.1\|2457730_2458219_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
AXK09982.1\|2458232_2459165_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.3e-25	29.5
AXK09983.1\|2459202_2460090_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	3.4e-18	28.7
AXK09984.1\|2460247_2461942_+	thiamine pyrophosphate-binding protein	E5ERI2	Ostreococcus_lucimarinus_virus	3.8e-26	24.5
AXK09985.1\|2461958_2463215_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK09986.1\|2463352_2463898_-	acyl dehydratase	NA	NA	NA	NA
AXK09987.1\|2463929_2465489_-	acetolactate synthase large subunit	NA	NA	NA	NA
AXK09988.1\|2465617_2466370_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-29	39.7
AXK09989.1\|2466391_2467084_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK09990.1\|2467106_2467898_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK09991.1\|2467924_2468830_-	agmatinase	NA	NA	NA	NA
AXK09992.1\|2469022_2469859_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK09993.1\|2469950_2470973_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.6e-67	40.7
AXK09994.1\|2471109_2472162_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	4.8e-35	37.8
AXK09995.1\|2472166_2473357_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
AXK09996.1\|2473359_2473839_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.5e-16	42.5
AXK09997.1\|2474024_2474504_-	disulfide bond formation protein B	NA	NA	NA	NA
AXK09998.1\|2474511_2474748_-	hypothetical protein	NA	NA	NA	NA
AXK09999.1\|2474767_2475169_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA
AXK10000.1\|2475171_2475423_-	type II toxin-antitoxin system MqsR family toxin	NA	NA	NA	NA
AXK10001.1\|2475477_2476359_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.8e-51	36.1
AXK10002.1\|2476583_2477030_+	GFA family protein	NA	NA	NA	NA
AXK10003.1\|2477114_2478179_-	fructose-bisphosphate aldolase class II	NA	NA	NA	NA
AXK10004.1\|2478315_2478897_-	MOSC domain-containing protein	NA	NA	NA	NA
AXK10005.1\|2479131_2480262_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK10006.1\|2480439_2481666_+	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	5.2e-134	58.8
AXK10007.1\|2481724_2482240_+	transporter	NA	NA	NA	NA
AXK10008.1\|2482262_2482589_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
AXK10009.1\|2482622_2483813_+	NAD-dependent formate dehydrogenase	NA	NA	NA	NA
AXK10010.1\|2483886_2484291_+	GFA family protein	NA	NA	NA	NA
AXK10011.1\|2484507_2485458_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10012.1\|2485555_2486326_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.3e-29	39.5
AXK10013.1\|2486322_2486994_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
AXK10014.1\|2486990_2487632_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
AXK10015.1\|2487644_2488565_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
AXK10016.1\|2488725_2489886_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10017.1\|2489927_2490878_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA
AXK10018.1\|2491476_2491701_+	hypothetical protein	NA	NA	NA	NA
AXK10019.1\|2491865_2493560_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AXK10020.1\|2493681_2493951_-	HPr family phosphocarrier protein	NA	NA	NA	NA
AXK10021.1\|2494066_2494465_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
AXK10022.1\|2494475_2495432_-	glutathione synthetase	NA	NA	NA	NA
AXK10023.1\|2495568_2496114_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.1e-14	29.9
AXK10024.1\|2496134_2498084_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	4.1e-125	36.0
AXK10025.1\|2498471_2499248_+	DNA-binding response regulator	NA	NA	NA	NA
AXK10026.1\|2499253_2499646_+	hypothetical protein	NA	NA	NA	NA
AXK10027.1\|2500066_2501017_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10028.1\|2501013_2502111_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.5e-20	37.3
AXK10029.1\|2502142_2503093_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10030.1\|2504873_2506115_-	MFS transporter	NA	NA	NA	NA
AXK10031.1\|2506126_2506900_-	peroxide stress protein YaaA	NA	NA	NA	NA
AXK10032.1\|2506926_2507877_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_20

2512776 : 2566213

Planktothrix_phage(28.57%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10037.1\|2512776_2513589_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
AXK10038.1\|2513592_2515296_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
AXK10039.1\|2515346_2516477_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK10040.1\|2516663_2517740_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
AXK11521.1\|2517821_2518472_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AXK10041.1\|2518486_2519920_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
AXK10042.1\|2520173_2520992_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10043.1\|2520988_2521693_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-13	30.0
AXK10044.1\|2522592_2523708_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10045.1\|2523741_2524116_-	hypothetical protein	NA	NA	NA	NA
AXK10046.1\|2524138_2525296_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA
AXK10047.1\|2525308_2525542_-	lipoprotein	NA	NA	NA	NA
AXK10048.1\|2526176_2529146_-	formate dehydrogenase	NA	NA	NA	NA
AXK10049.1\|2529160_2529370_-	formate dehydrogenase	NA	NA	NA	NA
AXK10050.1\|2529521_2530151_-	molecular chaperone	NA	NA	NA	NA
AXK10051.1\|2530147_2532265_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
AXK10052.1\|2532261_2532942_-	DUF3306 domain-containing protein	NA	NA	NA	NA
AXK10053.1\|2532938_2533499_-	DUF3305 domain-containing protein	NA	NA	NA	NA
AXK10054.1\|2533505_2534603_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXK10055.1\|2534740_2535349_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA
AXK10056.1\|2535345_2536638_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
AXK10057.1\|2536651_2537194_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
AXK10058.1\|2537203_2538040_-	M48 family peptidase	NA	NA	NA	NA
AXK10059.1\|2538073_2539135_-	chorismate synthase	A0A291AU41	Pandoravirus	2.9e-80	42.8
AXK10060.1\|2539176_2540229_-	GGDEF domain-containing protein	NA	NA	NA	NA
AXK10061.1\|2540244_2540547_-	hypothetical protein	NA	NA	NA	NA
AXK10062.1\|2540688_2541639_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10063.1\|2541816_2543511_+	iron ABC transporter permease	NA	NA	NA	NA
AXK10064.1\|2543507_2544593_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.4e-27	37.7
AXK10065.1\|2544640_2545540_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10066.1\|2545550_2546195_+	histidine phosphatase family protein	NA	NA	NA	NA
AXK10067.1\|2547216_2550459_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AXK10068.1\|2550469_2551567_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.3e-53	35.2
AXK10069.1\|2551829_2552813_+	transaldolase	H6WFR1	Cyanophage	5.9e-11	29.2
AXK10070.1\|2552910_2553861_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10071.1\|2553958_2554909_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10072.1\|2555006_2555957_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10073.1\|2555966_2556656_-	VIT family protein	NA	NA	NA	NA
AXK10074.1\|2556715_2557153_-	PaaI family thioesterase	NA	NA	NA	NA
AXK10075.1\|2557198_2558092_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
AXK10076.1\|2558139_2559312_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK10077.1\|2559308_2560463_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
AXK10078.1\|2560659_2561010_-	RnfH family protein	NA	NA	NA	NA
AXK10079.1\|2560999_2561434_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXK10080.1\|2561450_2562401_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10081.1\|2562547_2563015_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	6.2e-27	45.1
AXK10082.1\|2562995_2564153_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.3e-14	36.2
AXK10083.1\|2564218_2565145_-	paraslipin	NA	NA	NA	NA
AXK10084.1\|2565262_2566213_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_21

2608492 : 2674984

Salmonella_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10123.1\|2608492_2609443_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10124.1\|2609812_2610385_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
AXK10125.1\|2610387_2611398_+	flagellar motor switch protein FliM	NA	NA	NA	NA
AXK10126.1\|2611390_2611891_+	flagellar motor switch protein FliN	NA	NA	NA	NA
AXK10127.1\|2611901_2612243_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA
AXK10128.1\|2612254_2613046_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA
AXK10129.1\|2613062_2613332_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA
AXK10130.1\|2613354_2614143_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA
AXK11525.1\|2614189_2615206_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK10131.1\|2615422_2616865_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.0e-35	41.8
AXK10132.1\|2620676_2622209_-	flagellar hook-associated protein 3	NA	NA	NA	NA
AXK10133.1\|2622242_2623889_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA
AXK10134.1\|2623958_2624981_-	flagellar assembly peptidoglycan hydrolase FlgJ	A0A088F6W1	Sulfitobacter_phage	1.9e-12	31.4
AXK10135.1\|2624998_2626132_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
AXK10136.1\|2626134_2626824_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
AXK10137.1\|2626823_2627609_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
AXK10138.1\|2627652_2628417_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA
AXK10139.1\|2628455_2629877_-	flagellar hook-basal body complex protein	NA	NA	NA	NA
AXK10140.1\|2629942_2630647_-	flagellar basal body rod modification protein	NA	NA	NA	NA
AXK10141.1\|2630694_2631114_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA
AXK10142.1\|2631126_2631534_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA
AXK11526.1\|2631717_2632428_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
AXK10143.1\|2632554_2632845_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
AXK10144.1\|2632862_2633345_+	flagellar protein FlgN	NA	NA	NA	NA
AXK10145.1\|2637850_2639005_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
AXK11527.1\|2639310_2640327_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK10146.1\|2640573_2641362_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10147.1\|2641428_2642109_+	amino acid ABC transporter permease	NA	NA	NA	NA
AXK10148.1\|2642105_2642876_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.8e-30	39.1
AXK10149.1\|2642973_2643924_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10150.1\|2643979_2644897_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AXK10151.1\|2644907_2646086_-	mandelate racemase	NA	NA	NA	NA
AXK10152.1\|2646105_2647101_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10153.1\|2648689_2649298_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
AXK10154.1\|2649285_2650326_+	LacI family transcriptional regulator	NA	NA	NA	NA
AXK10155.1\|2650343_2651306_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10156.1\|2651302_2652496_-	CoA transferase	NA	NA	NA	NA
AXK10157.1\|2652492_2653290_-	citryl-CoA lyase	NA	NA	NA	NA
AXK10158.1\|2653315_2654302_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10159.1\|2654320_2656360_-	acetyl-CoA synthetase	NA	NA	NA	NA
AXK11528.1\|2656561_2657242_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK10160.1\|2657255_2658167_-	CoA ester lyase	NA	NA	NA	NA
AXK10161.1\|2658163_2658742_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA
AXK10162.1\|2658880_2659786_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10163.1\|2659793_2663213_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA
AXK10164.1\|2663200_2665801_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA
AXK10165.1\|2666756_2667389_-	PadR family transcriptional regulator	NA	NA	NA	NA
AXK10166.1\|2667782_2668541_+	EEP domain-containing protein	NA	NA	NA	NA
AXK10167.1\|2668537_2669740_+	cardiolipin synthase ClsB	NA	NA	NA	NA
AXK10168.1\|2669927_2670878_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10169.1\|2671784_2672930_+	DUF3182 family protein	NA	NA	NA	NA
AXK11529.1\|2672949_2673672_+	alpha/beta hydrolase	NA	NA	NA	NA
AXK10170.1\|2673788_2673968_+	hypothetical protein	NA	NA	NA	NA
AXK10171.1\|2674033_2674984_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_22

2837542 : 2903119

Oenococcus_phage(33.33%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10300.1\|2837542_2838493_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10301.1\|2838590_2839541_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10302.1\|2839742_2840732_+	succinylglutamate desuccinylase	NA	NA	NA	NA
AXK11542.1\|2840815_2841169_+	hypothetical protein	NA	NA	NA	NA
AXK10303.1\|2841246_2841855_-	hypothetical protein	NA	NA	NA	NA
AXK10304.1\|2843528_2844107_-	amino acid synthesis family protein	NA	NA	NA	NA
AXK10305.1\|2844131_2845085_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10306.1\|2845124_2846042_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK10307.1\|2846163_2847090_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10308.1\|2847097_2847844_-	aldolase	NA	NA	NA	NA
AXK10309.1\|2848168_2849110_+	LD-carboxypeptidase	NA	NA	NA	NA
AXK10310.1\|2849185_2849308_-	hypothetical protein	NA	NA	NA	NA
AXK10311.1\|2849336_2851034_-	sodium:proline symporter	NA	NA	NA	NA
AXK10312.1\|2851468_2852890_-	MFS transporter	NA	NA	NA	NA
AXK10313.1\|2853043_2853823_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK11543.1\|2853947_2854820_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10314.1\|2854931_2856056_+	mandelate racemase/muconate lactonizing enzyme family protein	Q6A202	Oenococcus_phage	1.5e-31	28.3
AXK10315.1\|2856101_2857064_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10316.1\|2857056_2857911_+	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA
AXK10317.1\|2858018_2858429_+	VOC family protein	NA	NA	NA	NA
AXK10318.1\|2858425_2859376_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK10319.1\|2859473_2860355_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
AXK10320.1\|2860432_2861812_-	4Fe-4S binding protein	NA	NA	NA	NA
AXK10321.1\|2861850_2862696_-	FTR1 family iron permease	NA	NA	NA	NA
AXK10322.1\|2862711_2863056_-	cupredoxin domain-containing protein	NA	NA	NA	NA
AXK10323.1\|2863058_2863595_-	hypothetical protein	NA	NA	NA	NA
AXK10324.1\|2863767_2864343_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA
AXK10325.1\|2864445_2865183_-	acetoacetyl-CoA reductase	NA	NA	NA	NA
AXK10326.1\|2865250_2866888_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
AXK10327.1\|2866995_2867751_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXK10328.1\|2867738_2868701_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AXK10329.1\|2868802_2869603_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXK10330.1\|2869664_2871740_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.4e-75	30.0
AXK10331.1\|2871904_2874280_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
AXK10332.1\|2874360_2875716_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
AXK10333.1\|2877192_2877915_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK10334.1\|2877969_2878953_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10335.1\|2879082_2880033_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10336.1\|2880029_2880932_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10337.1\|2881019_2881778_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK10338.1\|2881790_2882939_-	cell division protein ZapE	NA	NA	NA	NA
AXK10339.1\|2882979_2884407_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.1e-41	28.1
AXK10340.1\|2884636_2885851_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
AXK10341.1\|2885896_2888767_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
AXK10342.1\|2891177_2891666_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK10343.1\|2891791_2894488_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA
AXK10344.1\|2894642_2896925_+	NADP-dependent malic enzyme	NA	NA	NA	NA
AXK10345.1\|2897089_2897722_+	fimbrial protein	NA	NA	NA	NA
AXK10346.1\|2897820_2898771_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10347.1\|2898817_2899372_-	transcription elongation factor GreB	NA	NA	NA	NA
AXK10348.1\|2899439_2900285_-	PHP domain-containing protein	NA	NA	NA	NA
AXK10349.1\|2900354_2901323_-	alpha/beta hydrolase	NA	NA	NA	NA
AXK10350.1\|2901322_2903119_-\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_23

2920688 : 2981628

Catovirus(22.22%)

holin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10360.1\|2920688_2922209_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.2e-82	36.0
AXK10361.1\|2922251_2922554_+	hypothetical protein	NA	NA	NA	NA
AXK10362.1\|2922550_2923183_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK10363.1\|2923261_2925127_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	9.3e-50	23.3
AXK10364.1\|2925123_2925939_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.5e-12	23.7
AXK10365.1\|2925946_2927062_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10366.1\|2927966_2928845_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK10367.1\|2928844_2929669_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.0e-08	22.7
AXK10368.1\|2929836_2930787_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10369.1\|2930969_2933849_+	EAL domain-containing protein	NA	NA	NA	NA
AXK10370.1\|2933830_2934607_-	DNA-binding response regulator	NA	NA	NA	NA
AXK10371.1\|2934699_2936163_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	1.7e-43	32.5
AXK10372.1\|2936159_2936531_-	DUF2069 domain-containing protein	NA	NA	NA	NA
AXK10373.1\|2936548_2937862_+	YihY family inner membrane protein	NA	NA	NA	NA
AXK10374.1\|2937898_2938357_+	CBS domain-containing protein	NA	NA	NA	NA
AXK10375.1\|2938468_2939419_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10376.1\|2939517_2940468_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10377.1\|2940464_2941478_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
AXK10378.1\|2941617_2942604_+	homoserine kinase	NA	NA	NA	NA
AXK10379.1\|2942647_2943448_+	hypothetical protein	NA	NA	NA	NA
AXK10380.1\|2944250_2945201_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10381.1\|2945351_2945954_-	YhbY family RNA-binding protein	NA	NA	NA	NA
AXK10382.1\|2945972_2946605_+	RlmE family RNA methyltransferase	NA	NA	NA	NA
AXK10383.1\|2946842_2948729_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.4e-109	41.5
AXK10384.1\|2948747_2949590_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-26	32.5
AXK10385.1\|2949586_2950945_+	phosphoglucosamine mutase	NA	NA	NA	NA
AXK10386.1\|2951165_2951960_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK10387.1\|2952190_2953684_-	exopolyphosphatase	NA	NA	NA	NA
AXK10388.1\|2953919_2956001_+	polyphosphate kinase 1	NA	NA	NA	NA
AXK10389.1\|2956195_2957236_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	2.1e-51	40.2
AXK10390.1\|2957370_2958387_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
AXK10391.1\|2958408_2959266_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA
AXK11545.1\|2959310_2960087_+	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-17	28.7
AXK10392.1\|2960453_2961404_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10393.1\|2961430_2961895_-	barstar family protein 2	NA	NA	NA	NA
AXK10394.1\|2963101_2965390_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AXK10395.1\|2965506_2966379_-	hypothetical protein	NA	NA	NA	NA
AXK10396.1\|2966421_2967576_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AXK10397.1\|2967610_2968441_-	transglycosylase	NA	NA	NA	NA
AXK10398.1\|2968524_2970069_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA
AXK10399.1\|2970111_2970471_-	hypothetical protein	NA	NA	NA	NA
AXK10400.1\|2970472_2970886_-\|holin	phage holin family protein	NA	NA	NA	NA
AXK10401.1\|2970926_2971244_-	DUF883 domain-containing protein	NA	NA	NA	NA
AXK10402.1\|2971328_2972045_-	hypothetical protein	NA	NA	NA	NA
AXK11546.1\|2972308_2973730_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
AXK10403.1\|2973796_2976544_-	pertactin autotransporter	NA	NA	NA	NA
AXK11547.1\|2976876_2977893_-\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK11548.1\|2978228_2978870_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXK10404.1\|2978960_2980397_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
AXK10405.1\|2980554_2981628_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA

DBSCAN-SWA_24

2986514 : 3059009

Pseudomonas_phage(14.29%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK11549.1\|2986514_2987531_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK10410.1\|2988468_2989896_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
AXK10411.1\|2989892_2990915_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	8.7e-50	45.4
AXK10412.1\|2990904_2991378_+	endoribonuclease YbeY	NA	NA	NA	NA
AXK10413.1\|2991503_2992406_+	CBS domain-containing protein	NA	NA	NA	NA
AXK10414.1\|2992402_2994046_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA
AXK10415.1\|2996975_2997608_-	protein phosphatase CheZ	NA	NA	NA	NA
AXK10416.1\|2997616_2998006_-	chemotaxis protein CheY	Q56AR1	Bacillus_thuringiensis_phage	5.7e-10	33.3
AXK10417.1\|2998058_2999111_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
AXK10418.1\|2999974_3001681_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.4e-12	41.7
AXK10419.1\|3001754_3002255_-	chemotaxis protein CheW	NA	NA	NA	NA
AXK10420.1\|3002269_3004327_-	chemotaxis protein CheA	NA	NA	NA	NA
AXK10421.1\|3004353_3004647_-	response regulator	NA	NA	NA	NA
AXK10422.1\|3004748_3005696_-	motility protein MotB	NA	NA	NA	NA
AXK10423.1\|3005708_3006584_-	flagellar motor stator protein MotA	NA	NA	NA	NA
AXK10424.1\|3006704_3007265_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
AXK10425.1\|3007299_3007623_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
AXK10426.1\|3008058_3008796_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA
AXK10427.1\|3009094_3010045_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10428.1\|3010288_3010552_+	translation initiation factor IF-1	NA	NA	NA	NA
AXK10429.1\|3010625_3010907_+	hypothetical protein	NA	NA	NA	NA
AXK10430.1\|3010923_3011784_-	M23 family peptidase	A0A292GJG6	Xanthomonas_phage	2.6e-15	36.1
AXK10431.1\|3011780_3012116_-	hypothetical protein	NA	NA	NA	NA
AXK10432.1\|3012169_3012820_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
AXK10433.1\|3014500_3015445_-	hypothetical protein	NA	NA	NA	NA
AXK10434.1\|3015490_3015808_-	MerR family transcriptional regulator	NA	NA	NA	NA
AXK10435.1\|3015810_3016749_-	curved DNA-binding protein	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	5.6e-11	24.1
AXK10436.1\|3016926_3017412_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXK10437.1\|3017430_3017979_+	damage-inducible protein DinB	NA	NA	NA	NA
AXK10438.1\|3018255_3019389_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK10439.1\|3019426_3020134_+	glutathione transferase	NA	NA	NA	NA
AXK11550.1\|3020288_3022637_+	DUF3141 domain-containing protein	NA	NA	NA	NA
AXK10440.1\|3022633_3023572_+	phosphate acetyltransferase	NA	NA	NA	NA
AXK10441.1\|3023597_3024788_+	acetate kinase	NA	NA	NA	NA
AXK10442.1\|3024784_3025558_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA
AXK10443.1\|3025587_3026781_-	phosphoglycerate kinase	NA	NA	NA	NA
AXK10444.1\|3026898_3027909_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AXK10445.1\|3027926_3029963_-	transketolase	NA	NA	NA	NA
AXK10446.1\|3030157_3030898_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
AXK10447.1\|3030995_3031946_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10448.1\|3031988_3033164_+	FliC/FljB family flagellin	NA	NA	NA	NA
AXK10449.1\|3033385_3035176_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-39	25.2
AXK10450.1\|3035188_3036850_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA
AXK10451.1\|3036862_3039568_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
AXK10452.1\|3039860_3041615_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
AXK10453.1\|3041611_3042238_+	DNA-binding response regulator	NA	NA	NA	NA
AXK10454.1\|3042234_3043086_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.1e-33	39.8
AXK10455.1\|3043161_3045276_+	M3 family peptidase	NA	NA	NA	NA
AXK10456.1\|3045426_3046077_+	SCO family protein	NA	NA	NA	NA
AXK10457.1\|3046222_3046474_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
AXK10458.1\|3046543_3047926_-	multidrug transporter	NA	NA	NA	NA
AXK10459.1\|3047922_3051102_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK11551.1\|3051909_3052827_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10460.1\|3052878_3053610_-	rRNA pseudouridine synthase	NA	NA	NA	NA
AXK10461.1\|3053669_3054242_+	chorismate lyase	NA	NA	NA	NA
AXK11552.1\|3055750_3056767_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK10462.1\|3056904_3057954_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA
AXK10463.1\|3058058_3059009_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_25

3078409 : 3143345

Bacillus_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10478.1\|3078409_3079360_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10479.1\|3079458_3080043_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
AXK10480.1\|3080077_3081067_-	ADP-glyceromanno-heptose 6-epimerase	E3SJ87	Synechococcus_phage	2.2e-26	34.4
AXK10481.1\|3081063_3082005_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.5e-16	28.1
AXK10482.1\|3082001_3083222_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
AXK10483.1\|3083264_3083579_-	DUF1049 domain-containing protein	NA	NA	NA	NA
AXK10484.1\|3083770_3084130_-	integration host factor subunit beta	NA	NA	NA	NA
AXK10485.1\|3084131_3085862_-	30S ribosomal protein S1	NA	NA	NA	NA
AXK10486.1\|3086034_3086706_-	(d)CMP kinase	NA	NA	NA	NA
AXK10487.1\|3086720_3088049_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AXK10488.1\|3088045_3088945_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
AXK10489.1\|3089031_3090117_-	prephenate dehydratase	NA	NA	NA	NA
AXK10490.1\|3090109_3091243_-	phosphoserine aminotransferase	M1Q1P2	Streptococcus_phage	6.4e-78	44.0
AXK10491.1\|3091242_3093924_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.2e-104	33.5
AXK10492.1\|3094294_3094876_+	OmpA family protein	NA	NA	NA	NA
AXK10493.1\|3094953_3095727_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
AXK10494.1\|3095723_3096401_+	phosphoglycolate phosphatase	NA	NA	NA	NA
AXK10495.1\|3096616_3097798_+	MFS transporter	NA	NA	NA	NA
AXK10496.1\|3098274_3098532_+	hypothetical protein	NA	NA	NA	NA
AXK10497.1\|3098570_3098753_+	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	3.7e-12	56.1
AXK10498.1\|3098782_3099733_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11554.1\|3099862_3100255_+	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PJ17	Moraxella_phage	4.8e-25	45.0
AXK10499.1\|3100531_3101443_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-05	27.6
AXK10500.1\|3101567_3102542_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10501.1\|3102538_3103489_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10502.1\|3103586_3104672_-	DNA polymerase IV	NA	NA	NA	NA
AXK10503.1\|3104769_3105180_+	PaaI family thioesterase	NA	NA	NA	NA
AXK10504.1\|3105795_3107709_+	S9 family peptidase	NA	NA	NA	NA
AXK10505.1\|3107844_3110457_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA
AXK10506.1\|3110458_3111193_-	serine/threonine protein phosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	1.9e-62	49.2
AXK10507.1\|3111356_3112538_+	PepSY domain-containing protein	NA	NA	NA	NA
AXK10508.1\|3112534_3112747_+	hypothetical protein	NA	NA	NA	NA
AXK10509.1\|3112743_3113724_-	aldo/keto reductase	NA	NA	NA	NA
AXK11555.1\|3113769_3114597_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-67	47.4
AXK10510.1\|3114743_3116561_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	5.7e-44	27.9
AXK10511.1\|3116615_3116999_+	ferredoxin	NA	NA	NA	NA
AXK10512.1\|3116995_3117946_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10513.1\|3118056_3118308_-	hypothetical protein	NA	NA	NA	NA
AXK10514.1\|3118501_3118717_-	hypothetical protein	NA	NA	NA	NA
AXK10515.1\|3118813_3119932_-	mannose-6-phosphate isomerase	NA	NA	NA	NA
AXK10516.1\|3120051_3120264_-	hypothetical protein	NA	NA	NA	NA
AXK10517.1\|3120423_3120645_-	hypothetical protein	NA	NA	NA	NA
AXK10518.1\|3120697_3121648_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10519.1\|3122823_3124194_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXK10520.1\|3124226_3125018_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK10521.1\|3125030_3126086_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
AXK10522.1\|3126111_3126987_-	amidohydrolase	NA	NA	NA	NA
AXK10523.1\|3127092_3127341_-	hypothetical protein	NA	NA	NA	NA
AXK10524.1\|3127375_3128830_-	carboxylase	NA	NA	NA	NA
AXK10525.1\|3128826_3129348_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AXK10526.1\|3129376_3130729_-	MmgE/PrpD family protein	NA	NA	NA	NA
AXK10527.1\|3130952_3133841_-	HD domain-containing protein	NA	NA	NA	NA
AXK10528.1\|3135985_3137287_+	phospholipase	NA	NA	NA	NA
AXK10529.1\|3137301_3138018_-	flagellar brake protein	NA	NA	NA	NA
AXK10530.1\|3138299_3138980_+	DUF3313 domain-containing protein	NA	NA	NA	NA
AXK10531.1\|3138991_3139159_-	hypothetical protein	NA	NA	NA	NA
AXK10532.1\|3139267_3139420_-	hypothetical protein	NA	NA	NA	NA
AXK10533.1\|3139507_3140167_-	thiopurine S-methyltransferase	NA	NA	NA	NA
AXK10534.1\|3140547_3142398_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-27	26.4
AXK10535.1\|3142394_3143345_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_26

3152957 : 3203269

Acidithiobacillus_phage(33.33%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10545.1\|3152957_3153908_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10546.1\|3154006_3154957_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10547.1\|3155096_3156314_+	threonine ammonia-lyase	NA	NA	NA	NA
AXK10548.1\|3156307_3156919_-	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	3.3e-12	32.5
AXK10549.1\|3157552_3158530_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
AXK10550.1\|3158673_3159420_+	triose-phosphate isomerase	NA	NA	NA	NA
AXK10551.1\|3159441_3159888_+	preprotein translocase subunit SecG	NA	NA	NA	NA
AXK10552.1\|3160675_3162907_+\|holin	high-affinity choline transporter BetT	NA	NA	NA	NA
AXK10553.1\|3162929_3163730_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK10554.1\|3164011_3165244_+	methylaspartate ammonia-lyase	NA	NA	NA	NA
AXK10555.1\|3165354_3166344_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10556.1\|3166374_3167763_+	MmgE/PrpD family protein	NA	NA	NA	NA
AXK10557.1\|3169361_3170345_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11556.1\|3170541_3171558_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
AXK10558.1\|3171754_3172579_-	SDR family oxidoreductase	NA	NA	NA	NA
AXK10559.1\|3172656_3173580_-	transcriptional regulator LrhA	NA	NA	NA	NA
AXK10560.1\|3173660_3174902_+	cystathionine beta-lyase	NA	NA	NA	NA
AXK10561.1\|3174935_3175937_+	peptidase M14	NA	NA	NA	NA
AXK10562.1\|3176065_3177037_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10563.1\|3177061_3179146_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
AXK10564.1\|3179212_3180205_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10565.1\|3180313_3181648_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK10566.1\|3181673_3183686_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
AXK11557.1\|3183682_3185731_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AXK10567.1\|3185834_3186482_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
AXK10568.1\|3186622_3187117_+	azurin	NA	NA	NA	NA
AXK10569.1\|3187160_3187832_-	transcriptional regulator	NA	NA	NA	NA
AXK10570.1\|3187846_3189340_-	TolC family protein	NA	NA	NA	NA
AXK10571.1\|3189336_3192450_-	MexW/MexI family multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-57	21.5
AXK10572.1\|3192462_3193569_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK10573.1\|3193692_3194361_-	transcriptional regulator	NA	NA	NA	NA
AXK10574.1\|3194581_3195532_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10575.1\|3195614_3197573_+\|holin	high-affinity choline transporter BetT	A0A2I7QNT1	Vibrio_phage	8.0e-28	30.3
AXK10576.1\|3197600_3198302_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10577.1\|3198448_3199264_+	diacylglycerol kinase	NA	NA	NA	NA
AXK10578.1\|3199260_3200076_+	metallophosphoesterase	NA	NA	NA	NA
AXK10579.1\|3200092_3200896_+	phosphatase PAP2 family protein	NA	NA	NA	NA
AXK10580.1\|3200879_3201314_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXK10581.1\|3201310_3201745_-	PaaI family thioesterase	NA	NA	NA	NA
AXK11558.1\|3201746_3202346_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXK10582.1\|3202318_3203269_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_27

3236014 : 3305015

Klosneuvirus(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10610.1\|3236014_3236965_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10611.1\|3236961_3237981_-	class 1 fructose-bisphosphatase	A0A1V0SKX4	Klosneuvirus	1.5e-49	35.7
AXK10612.1\|3237990_3240699_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.8e-15	24.0
AXK10613.1\|3240846_3241503_+	DUF4136 domain-containing protein	NA	NA	NA	NA
AXK10614.1\|3241601_3242552_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10615.1\|3242657_3243593_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
AXK10616.1\|3243792_3245487_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA
AXK10617.1\|3245521_3246448_+	VOC family protein	NA	NA	NA	NA
AXK11559.1\|3246516_3247614_+	hypothetical protein	NA	NA	NA	NA
AXK10618.1\|3247632_3248496_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.6e-34	38.9
AXK10619.1\|3248507_3249290_+	ABC transporter permease	NA	NA	NA	NA
AXK10620.1\|3249286_3250405_+	DUF2817 domain-containing protein	NA	NA	NA	NA
AXK10621.1\|3250401_3251934_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
AXK10622.1\|3251974_3252982_+	zinc-binding dehydrogenase	NA	NA	NA	NA
AXK10623.1\|3253126_3253849_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK10624.1\|3253864_3254887_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA
AXK10625.1\|3255203_3255938_-	GntR family transcriptional regulator	NA	NA	NA	NA
AXK10626.1\|3256022_3257768_+	acetolactate synthase catalytic subunit	NA	NA	NA	NA
AXK10627.1\|3257764_3258517_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK10628.1\|3258561_3259518_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10629.1\|3259606_3260173_+	hypothetical protein	NA	NA	NA	NA
AXK10630.1\|3260180_3261041_-	D-amino-acid transaminase	NA	NA	NA	NA
AXK10631.1\|3261070_3261814_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.4
AXK10632.1\|3261830_3262514_-	ABC transporter permease subunit	NA	NA	NA	NA
AXK10633.1\|3263351_3264266_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10634.1\|3264330_3265239_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10635.1\|3265329_3266754_-	TolC family protein	NA	NA	NA	NA
AXK10636.1\|3266755_3268078_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AXK10637.1\|3268074_3270213_-	cyclolysin secretion/processing ATP-binding protein CyaB	W8CYL7	Bacillus_phage	2.7e-45	29.2
AXK10638.1\|3270290_3275411_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA
AXK11560.1\|3275597_3275777_-	hypothetical protein	NA	NA	NA	NA
AXK10639.1\|3275859_3276447_+	toxin-activating lysine-acyltransferase	NA	NA	NA	NA
AXK10640.1\|3276462_3277944_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
AXK10641.1\|3277998_3279852_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK10642.1\|3280113_3281451_-	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK10643.1\|3281485_3283483_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA
AXK10644.1\|3283500_3285549_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA
AXK10645.1\|3285679_3286546_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXK10646.1\|3286814_3287780_-	octaprenyl diphosphate synthase	NA	NA	NA	NA
AXK10647.1\|3287894_3289043_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA
AXK10648.1\|3289467_3289779_+	50S ribosomal protein L21	NA	NA	NA	NA
AXK10649.1\|3289812_3290073_+	50S ribosomal protein L27	NA	NA	NA	NA
AXK10650.1\|3290222_3291356_+	GTPase ObgE	NA	NA	NA	NA
AXK10651.1\|3291426_3292563_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.8e-63	44.8
AXK10652.1\|3292728_3293523_-	DNA-binding response regulator	NA	NA	NA	NA
AXK10653.1\|3293585_3294029_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK10654.1\|3294144_3295095_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10655.1\|3295081_3295270_-	hypothetical protein	NA	NA	NA	NA
AXK10656.1\|3295217_3295625_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXK10657.1\|3295697_3297893_+	DUF1156 domain-containing protein	NA	NA	NA	NA
AXK10658.1\|3298113_3299064_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10659.1\|3299023_3299548_-	RNA polymerase subunit sigma	NA	NA	NA	NA
AXK10660.1\|3299679_3300651_+	FecR family protein	NA	NA	NA	NA
AXK11561.1\|3300770_3303215_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXK10661.1\|3303230_3303821_-	polyisoprenoid-binding protein	NA	NA	NA	NA
AXK10662.1\|3304064_3305015_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_28

3320458 : 3420569

109

uncultured_Caudovirales_phage(13.79%)

terminase,tail,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK10676.1\|3320458_3321409_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10677.1\|3322140_3322518_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
AXK10678.1\|3322502_3323204_-	hypothetical protein	NA	NA	NA	NA
AXK10679.1\|3323347_3324040_-	nucleotidyltransferase family protein	NA	NA	NA	NA
AXK10680.1\|3324039_3325143_-	aminoglycoside phosphotransferase	NA	NA	NA	NA
AXK10681.1\|3325252_3327625_+	LPS-assembly protein LptD	NA	NA	NA	NA
AXK10682.1\|3327621_3329181_+	chaperone SurA	NA	NA	NA	NA
AXK10683.1\|3329205_3330003_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
AXK10684.1\|3330034_3331180_-	glycerate kinase	W6LM47	Streptococcus_phage	1.7e-41	42.2
AXK10685.1\|3331284_3332727_+	pyruvate kinase	NA	NA	NA	NA
AXK11562.1\|3332729_3333818_-	hypothetical protein	NA	NA	NA	NA
AXK10686.1\|3336096_3337047_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10687.1\|3337033_3337252_-	hypothetical protein	NA	NA	NA	NA
AXK10688.1\|3338176_3338734_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK10689.1\|3338709_3339060_-	hypothetical protein	NA	NA	NA	NA
AXK10690.1\|3339228_3340023_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	30.6
AXK10691.1\|3340019_3341069_-	iron ABC transporter permease	NA	NA	NA	NA
AXK10692.1\|3341068_3341758_-	tol-pal system protein YbgF	NA	NA	NA	NA
AXK10693.1\|3341844_3342342_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
AXK10694.1\|3342373_3343690_-	Tol-Pal system protein TolB	NA	NA	NA	NA
AXK10695.1\|3343706_3344681_-	cell envelope integrity protein TolA	NA	NA	NA	NA
AXK10696.1\|3344717_3345176_-	protein TolR	NA	NA	NA	NA
AXK10697.1\|3345175_3345856_-	protein TolQ	NA	NA	NA	NA
AXK10698.1\|3345858_3346287_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AXK10699.1\|3346339_3348070_-\|tRNA	proline--tRNA ligase	A0A2K9L3R9	Tupanvirus	4.6e-11	29.4
AXK10700.1\|3348135_3348708_+	RNA pyrophosphohydrolase	NA	NA	NA	NA
AXK10701.1\|3348688_3349375_+	DNA-binding response regulator	NA	NA	NA	NA
AXK10702.1\|3349730_3350402_+	SOS response-associated peptidase	Q5QF62	Pseudomonas_virus	4.7e-36	39.9
AXK10703.1\|3350408_3350609_-	hypothetical protein	NA	NA	NA	NA
AXK10704.1\|3350951_3351233_+	hypothetical protein	NA	NA	NA	NA
AXK10705.1\|3351229_3351763_-	DUF2514 family protein	NA	NA	NA	NA
AXK10706.1\|3351744_3352296_-	lysozyme	NA	NA	NA	NA
AXK10707.1\|3352274_3352517_-	hypothetical protein	NA	NA	NA	NA
AXK10708.1\|3352521_3353334_-	hypothetical protein	NA	NA	NA	NA
AXK10709.1\|3353333_3353597_-	hypothetical protein	NA	NA	NA	NA
AXK10710.1\|3353815_3354232_-	hypothetical protein	NA	NA	NA	NA
AXK10711.1\|3354236_3358193_-	DUF1983 domain-containing protein	A0A0B5A1N2	Achromobacter_phage	3.9e-215	40.8
AXK10712.1\|3358185_3358575_-	peptidoglycan endopeptidase	A0A0G3EYJ9	Achromobacter_phage	3.0e-35	50.0
AXK10713.1\|3358571_3359105_-	DUF1833 domain-containing protein	A5A3Q9	Burkholderia_phage	1.1e-40	46.9
AXK10714.1\|3359172_3359532_-	hypothetical protein	NA	NA	NA	NA
AXK10715.1\|3359541_3362154_-\|tail	phage tail tape measure protein	A0A2H4J107	uncultured_Caudovirales_phage	4.9e-105	38.6
AXK10716.1\|3362179_3362470_-	hypothetical protein	A0A2H4JBP7	uncultured_Caudovirales_phage	3.7e-14	45.2
AXK10717.1\|3362487_3362817_-	hypothetical protein	A0A2H4J121	uncultured_Caudovirales_phage	2.9e-15	44.0
AXK10718.1\|3362826_3363345_-\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	5.4e-24	38.3
AXK10719.1\|3363599_3364100_-	HNH endonuclease	A0A1I9SEX5	Klebsiella_phage	4.4e-31	45.1
AXK10720.1\|3364107_3364530_-	hypothetical protein	NA	NA	NA	NA
AXK10721.1\|3364526_3364925_-	HK97 gp10 family phage protein	I6PCW1	Cronobacter_phage	4.2e-16	38.0
AXK10722.1\|3364921_3365317_-	hypothetical protein	A0A2D2W284	Stenotrophomonas_phage	7.8e-07	35.0
AXK10723.1\|3365316_3365517_-	hypothetical protein	NA	NA	NA	NA
AXK10724.1\|3365518_3366001_-	hypothetical protein	A0A2H4JE38	uncultured_Caudovirales_phage	1.8e-13	37.1
AXK10725.1\|3366063_3366315_-	hypothetical protein	NA	NA	NA	NA
AXK10726.1\|3366324_3366972_-	hypothetical protein	R9TJ64	Synechococcus_phage	2.7e-65	71.1
AXK10727.1\|3366989_3367940_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10728.1\|3368368_3368971_-	hypothetical protein	R9TF81	Synechococcus_phage	7.9e-27	43.6
AXK10729.1\|3369093_3369336_-	hypothetical protein	A0A0H5AUE5	Pseudomonas_phage	5.6e-16	53.2
AXK11563.1\|3369341_3370397_-	hypothetical protein	A0A0H5BBX3	Pseudomonas_phage	2.6e-97	50.6
AXK10730.1\|3370425_3371844_-	DUF4055 domain-containing protein	R9TF43	Synechococcus_phage	2.2e-99	42.1
AXK10731.1\|3371846_3373124_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.4e-150	64.7
AXK10732.1\|3373110_3373560_-\|terminase	terminase	C7U0W1	Enterobacteria_phage	5.2e-39	61.5
AXK10733.1\|3374235_3375186_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10734.1\|3375203_3375425_+	hypothetical protein	NA	NA	NA	NA
AXK10735.1\|3375439_3376138_+	hypothetical protein	NA	NA	NA	NA
AXK10736.1\|3376130_3376451_+	hypothetical protein	NA	NA	NA	NA
AXK11564.1\|3376930_3377542_+	LexA family transcriptional repressor	NA	NA	NA	NA
AXK10737.1\|3377607_3377820_+	hypothetical protein	NA	NA	NA	NA
AXK10738.1\|3378071_3379022_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10739.1\|3379120_3380194_-	tetratricopeptide repeat protein	NA	NA	NA	NA
AXK10740.1\|3380361_3381156_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK10741.1\|3381195_3381720_-	DUF934 domain-containing protein	NA	NA	NA	NA
AXK10742.1\|3381712_3383455_-	nitrite/sulfite reductase	NA	NA	NA	NA
AXK10743.1\|3383664_3384423_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-14	24.4
AXK10744.1\|3384425_3385133_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.2e-07	25.4
AXK10745.1\|3385149_3386031_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK10746.1\|3386041_3386800_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK11565.1\|3386768_3387524_+	hypothetical protein	NA	NA	NA	NA
AXK10747.1\|3387593_3389012_+	amidase	NA	NA	NA	NA
AXK10748.1\|3389033_3389684_-	carbonic anhydrase	NA	NA	NA	NA
AXK10749.1\|3389817_3390153_-	ASCH domain-containing protein	NA	NA	NA	NA
AXK10750.1\|3390240_3391191_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10751.1\|3391267_3393088_+	DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	3.1e-74	35.3
AXK10752.1\|3393092_3394166_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	2.3e-08	25.7
AXK10753.1\|3394288_3395257_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
AXK10754.1\|3395330_3396242_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA
AXK10755.1\|3396260_3396833_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
AXK10756.1\|3396913_3397462_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
AXK10757.1\|3397461_3399051_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	8.7e-65	47.2
AXK10758.1\|3399120_3399360_-	Fis family transcriptional regulator	NA	NA	NA	NA
AXK10759.1\|3399400_3400432_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXK10760.1\|3400491_3401673_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA
AXK10761.1\|3401769_3402222_+	hypothetical protein	NA	NA	NA	NA
AXK10762.1\|3402231_3403572_-	peptidase M24 family protein	NA	NA	NA	NA
AXK10763.1\|3403888_3404926_+	sodium:calcium antiporter	NA	NA	NA	NA
AXK10764.1\|3405307_3405667_+	hypothetical protein	NA	NA	NA	NA
AXK11566.1\|3405750_3406692_-\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK10765.1\|3406766_3407717_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK10766.1\|3408010_3409105_+	porin	NA	NA	NA	NA
AXK10767.1\|3409186_3410068_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA
AXK10768.1\|3410089_3410929_-	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	1.1e-66	48.9
AXK10769.1\|3411004_3412522_+	peptidase	NA	NA	NA	NA
AXK10770.1\|3412618_3413719_-	alpha/beta fold hydrolase	NA	NA	NA	NA
AXK10771.1\|3413735_3414158_-	DUF4440 domain-containing protein	NA	NA	NA	NA
AXK10772.1\|3414180_3414393_-	zinc-finger domain-containing protein	NA	NA	NA	NA
AXK10773.1\|3414439_3415360_-	branched-chain amino acid transaminase	NA	NA	NA	NA
AXK11567.1\|3415623_3416292_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
AXK10774.1\|3416294_3416624_+	AzlD domain-containing protein	NA	NA	NA	NA
AXK10775.1\|3416830_3418264_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.5e-52	34.4
AXK10776.1\|3418275_3418659_-	thioredoxin	NA	NA	NA	NA
AXK10777.1\|3418720_3419521_+	hypothetical protein	NA	NA	NA	NA
AXK10778.1\|3419618_3420569_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_29

3708192 : 3841111

117

uncultured_Mediterranean_phage(10.34%)

integrase,tRNA,transposase

attL 3756145:3756204|attR 3845559:3846612

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK11024.1\|3708192_3709143_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11025.1\|3709139_3709775_-	transporter	NA	NA	NA	NA
AXK11026.1\|3709904_3710804_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA
AXK11027.1\|3710899_3711391_+	copper chaperone PCu(A)C	NA	NA	NA	NA
AXK11028.1\|3711437_3712403_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11029.1\|3713536_3714778_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	1.9e-14	24.9
AXK11030.1\|3714891_3715908_+	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	3.5e-75	43.8
AXK11031.1\|3715942_3716419_-	hypothetical protein	NA	NA	NA	NA
AXK11032.1\|3716561_3717470_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
AXK11033.1\|3717583_3718696_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	1.9e-21	35.0
AXK11034.1\|3718796_3719330_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK11035.1\|3719418_3720669_+	kynureninase	NA	NA	NA	NA
AXK11036.1\|3720770_3721283_+	peptide deformylase	E3SLL2	Synechococcus_phage	8.5e-22	43.3
AXK11037.1\|3721380_3722331_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11038.1\|3722396_3723335_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.4e-09	35.7
AXK11039.1\|3723357_3723984_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
AXK11040.1\|3723980_3724637_-	HAD family hydrolase	NA	NA	NA	NA
AXK11041.1\|3724633_3725236_-	hypothetical protein	NA	NA	NA	NA
AXK11042.1\|3725242_3725869_-	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	1.5e-07	23.3
AXK11043.1\|3726010_3726580_+	bacterioferritin	NA	NA	NA	NA
AXK11044.1\|3726650_3727970_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
AXK11045.1\|3728076_3728268_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AXK11046.1\|3728519_3729809_+	FAD-binding oxidoreductase	NA	NA	NA	NA
AXK11047.1\|3729963_3730959_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11048.1\|3731043_3731718_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXK11049.1\|3731714_3732665_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11050.1\|3732651_3732834_-	hypothetical protein	NA	NA	NA	NA
AXK11051.1\|3732826_3734068_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	4.0e-25	25.2
AXK11052.1\|3734064_3735009_+	arginase	A0A0N9R043	Chrysochromulina_ericina_virus	9.5e-27	33.3
AXK11053.1\|3735127_3736078_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11054.1\|3736037_3736967_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11055.1\|3737020_3737356_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
AXK11056.1\|3737400_3738165_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
AXK11057.1\|3738188_3738929_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK11058.1\|3738936_3740511_-	long-chain fatty acid--CoA ligase	A0A2K9L3I8	Tupanvirus	2.0e-13	22.6
AXK11059.1\|3740524_3741502_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11060.1\|3741774_3742374_-	ureidoglycolate hydrolase	NA	NA	NA	NA
AXK11061.1\|3742407_3749310_-	autotransporter BatB	NA	NA	NA	NA
AXK11062.1\|3749756_3749888_-	entericidin, EcnA/B family	NA	NA	NA	NA
AXK11063.1\|3749919_3750081_-	hypothetical protein	NA	NA	NA	NA
AXK11064.1\|3750153_3750360_-	DUF3596 domain-containing protein	NA	NA	NA	NA
AXK11065.1\|3751364_3752024_+	HAD family hydrolase	NA	NA	NA	NA
AXK11066.1\|3752051_3753197_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
AXK11067.1\|3753337_3753673_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AXK11068.1\|3753747_3754608_-	prohibitin family protein	A0A2C9D0H9	Yersinia_phage	1.7e-51	53.6
AXK11069.1\|3754871_3755573_-	glutathione S-transferase	NA	NA	NA	NA
AXK11070.1\|3755742_3756138_+	RidA family protein	NA	NA	NA	NA
3756145:3756204	attL	NA	NA	NA	NA
AXK11071.1\|3756246_3757197_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11072.1\|3757207_3757849_+	hypothetical protein	NA	NA	NA	NA
AXK11073.1\|3758015_3758258_+	hypothetical protein	NA	NA	NA	NA
AXK11074.1\|3758355_3759306_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11075.1\|3759341_3759809_+	hypothetical protein	Q3HQX1	Burkholderia_phage	2.1e-43	71.3
AXK11076.1\|3760042_3760420_+	hypothetical protein	NA	NA	NA	NA
AXK11077.1\|3760416_3760599_+	hypothetical protein	NA	NA	NA	NA
AXK11078.1\|3760602_3761589_+	DNA recombinase	H9C0R8	Aeromonas_phage	2.0e-67	57.3
AXK11079.1\|3761585_3762233_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	2.0e-31	41.4
AXK11080.1\|3762290_3762818_+	hypothetical protein	NA	NA	NA	NA
AXK11081.1\|3762851_3764039_+	hypothetical protein	A0A291L9X3	Bordetella_phage	1.5e-24	37.8
AXK11082.1\|3764028_3764391_+	hypothetical protein	A0A0H5ARN8	Pseudomonas_phage	1.8e-13	47.9
AXK11083.1\|3764383_3764503_+	hypothetical protein	NA	NA	NA	NA
AXK11084.1\|3764503_3764704_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXK11085.1\|3764700_3765690_-\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	4.4e-75	44.4
AXK11086.1\|3767176_3769147_-	DUF3120 domain-containing protein	NA	NA	NA	NA
AXK11087.1\|3769388_3769787_+	hypothetical protein	NA	NA	NA	NA
AXK11088.1\|3769795_3770719_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXK11089.1\|3771175_3772126_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11090.1\|3772356_3774048_-	membrane protein insertase YidC	NA	NA	NA	NA
AXK11091.1\|3774096_3774369_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.0e-15	52.2
AXK11092.1\|3774365_3774737_-	ribonuclease P protein component	NA	NA	NA	NA
AXK11093.1\|3774832_3774967_-	50S ribosomal protein L34	NA	NA	NA	NA
AXK11094.1\|3775372_3776782_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
AXK11095.1\|3776778_3777894_+	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.6e-41	32.6
AXK11096.1\|3777988_3780442_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	2.3e-112	34.8
AXK11097.1\|3780560_3781352_-	IclR family transcriptional regulator	NA	NA	NA	NA
AXK11098.1\|3781471_3782899_+	amidase	NA	NA	NA	NA
AXK11578.1\|3782937_3783909_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11099.1\|3784327_3785491_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA
AXK11100.1\|3785578_3786424_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK11101.1\|3787979_3788930_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11102.1\|3789484_3789859_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXK11103.1\|3789933_3790992_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXK11104.1\|3791015_3791966_-\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11105.1\|3794846_3796016_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
AXK11579.1\|3796116_3797724_+	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	5.4e-22	57.3
AXK11106.1\|3797770_3799792_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA
AXK11107.1\|3799820_3800066_-	DUF1653 domain-containing protein	NA	NA	NA	NA
AXK11108.1\|3800079_3801270_-	acetylornithine transaminase	A0A1V0SKB7	Klosneuvirus	4.4e-21	26.7
AXK11109.1\|3801465_3802431_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11110.1\|3802453_3803593_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
AXK11111.1\|3803804_3804767_+	immunogenic protein	NA	NA	NA	NA
AXK11112.1\|3804890_3806915_+	TRAP transporter permease	NA	NA	NA	NA
AXK11113.1\|3807111_3809355_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
AXK11114.1\|3809633_3810092_+	DUF494 domain-containing protein	NA	NA	NA	NA
AXK11115.1\|3811019_3813641_-	DUF4401 domain-containing protein	NA	NA	NA	NA
AXK11116.1\|3813704_3816332_+	DNA topoisomerase III	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	6.1e-23	25.4
AXK11117.1\|3816483_3817548_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK11118.1\|3817544_3818318_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-24	33.9
AXK11119.1\|3818326_3819160_+	ABC transporter permease	NA	NA	NA	NA
AXK11120.1\|3819172_3819952_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK11580.1\|3819986_3821459_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AXK11121.1\|3821486_3822245_+	SDR family oxidoreductase	NA	NA	NA	NA
AXK11122.1\|3822300_3824151_-	biosynthetic-type acetolactate synthase large subunit	E4WLQ6	Ostreococcus_tauri_virus	2.2e-59	30.4
AXK11123.1\|3824244_3824721_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
AXK11124.1\|3824737_3825658_-	bestrophin	NA	NA	NA	NA
AXK11125.1\|3825764_3826265_+	SET domain-containing protein	NA	NA	NA	NA
AXK11126.1\|3826638_3827331_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.3e-36	41.6
AXK11127.1\|3827638_3828589_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11128.1\|3828585_3832359_-	methionine synthase	A0A140XBC7	Dickeya_phage	8.6e-10	50.8
AXK11129.1\|3832695_3834585_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	7.6e-07	30.8
AXK11130.1\|3834596_3835490_+	cobalamin-binding protein	NA	NA	NA	NA
AXK11131.1\|3835515_3836391_+	thiazole synthase	NA	NA	NA	NA
AXK11132.1\|3836387_3837239_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
AXK11133.1\|3837300_3837981_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.5e-15	34.8
AXK11134.1\|3837984_3838344_+	hypothetical protein	NA	NA	NA	NA
AXK11135.1\|3838344_3839304_+	hypothetical protein	NA	NA	NA	NA
AXK11136.1\|3839324_3839813_-	D-beta-D-heptose 1-phosphate adenylyltransferase	A0A1B1IUK5	uncultured_Mediterranean_phage	1.6e-17	34.1
AXK11581.1\|3840094_3841111_+\|transposase	IS110 family transposase IS1663	NA	NA	NA	NA
3845559:3846612	attR	NA	NA	NA	NA

DBSCAN-SWA_30

4007222 : 4072133

Planktothrix_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXK11300.1\|4007222_4007708_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK11301.1\|4007926_4008907_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11302.1\|4009173_4009983_+	Pertussis toxin subunit 1	NA	NA	NA	NA
AXK11303.1\|4010022_4010703_+	Pertussis toxin subunit 2	NA	NA	NA	NA
AXK11304.1\|4010696_4011155_+	pertussis toxin subunit 4	NA	NA	NA	NA
AXK11305.1\|4011166_4011529_+	Pertussis toxin subunit 5	NA	NA	NA	NA
AXK11306.1\|4011611_4012295_+	Pertussis toxin subunit 3	NA	NA	NA	NA
AXK11307.1\|4012350_4012659_+	type IV secretion protein A	NA	NA	NA	NA
AXK11308.1\|4012677_4012992_+	type IV secretion protein B	NA	NA	NA	NA
AXK11309.1\|4012988_4015463_+	type IV secretion system protein PtlC	NA	NA	NA	NA
AXK11310.1\|4015470_4016862_+	type IV secretion system protein PtlD	NA	NA	NA	NA
AXK11311.1\|4016858_4017044_+	type IV secretion protein I	NA	NA	NA	NA
AXK11312.1\|4017022_4017724_+	type IV secretion protein E	NA	NA	NA	NA
AXK11313.1\|4017720_4018542_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA
AXK11590.1\|4018522_4019647_+	type IV secretion system protein PtlG	NA	NA	NA	NA
AXK11314.1\|4019639_4020659_+	type IV secretion protein H	NA	NA	NA	NA
AXK11315.1\|4020864_4021899_-	DMT family transporter	NA	NA	NA	NA
AXK11591.1\|4021999_4022791_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXK11316.1\|4022873_4023248_+	DUF1232 domain-containing protein	NA	NA	NA	NA
AXK11317.1\|4023225_4024635_+	DUF2868 domain-containing protein	NA	NA	NA	NA
AXK11318.1\|4024627_4026010_+	DUF3482 domain-containing protein	A0A0R6PHS5	Moraxella_phage	9.9e-57	38.9
AXK11319.1\|4026344_4027949_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXK11320.1\|4027984_4028998_+	ABC transporter permease	NA	NA	NA	NA
AXK11321.1\|4029008_4029935_+	ABC transporter permease	NA	NA	NA	NA
AXK11322.1\|4030325_4031276_-\|transposase	IS481 family transposase IS481	NA	NA	NA	NA
AXK11323.1\|4031445_4032672_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA
AXK11324.1\|4032871_4033738_+	ATP-binding protein	NA	NA	NA	NA
AXK11325.1\|4033730_4034693_+	Nudix family hydrolase	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	1.9e-06	53.4
AXK11326.1\|4034793_4035744_+\|transposase	IS481 family transposase	NA	NA	NA	NA
AXK11327.1\|4035842_4036793_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11328.1\|4036891_4037842_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA
AXK11329.1\|4037838_4039332_-	RND transporter	NA	NA	NA	NA
AXK11330.1\|4039328_4042436_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK11331.1\|4042432_4045501_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXK11332.1\|4045497_4046748_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXK11333.1\|4046928_4047690_-	cell division protein ZapD	NA	NA	NA	NA
AXK11334.1\|4047722_4048373_-	dephospho-CoA kinase	NA	NA	NA	NA
AXK11335.1\|4048375_4049215_-	prepilin peptidase	NA	NA	NA	NA
AXK11336.1\|4049455_4050199_+	hypothetical protein	NA	NA	NA	NA
AXK11337.1\|4050281_4050629_-	LuxR family transcriptional regulator	NA	NA	NA	NA
AXK11338.1\|4050726_4051569_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
AXK11339.1\|4051613_4052501_-	segregation/condensation protein A	NA	NA	NA	NA
AXK11340.1\|4052527_4052716_-	DUF3460 family protein	NA	NA	NA	NA
AXK11341.1\|4052813_4054271_+	MFS transporter	NA	NA	NA	NA
AXK11342.1\|4054257_4055784_+	glycerol kinase	NA	NA	NA	NA
AXK11343.1\|4055802_4056270_-	hypothetical protein	NA	NA	NA	NA
AXK11344.1\|4056269_4057292_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
AXK11345.1\|4057412_4058153_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-35	39.7
AXK11346.1\|4058207_4059308_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK11347.1\|4059309_4060500_-	amino acid ABC transporter permease	NA	NA	NA	NA
AXK11348.1\|4060619_4061636_-	amino acid ABC transporter substrate-binding protein	A0A1B1IT51	uncultured_Mediterranean_phage	1.0e-71	42.1
AXK11349.1\|4061954_4062626_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.5e-29	38.2
AXK11350.1\|4062622_4063531_+	ABC transporter permease	NA	NA	NA	NA
AXK11351.1\|4063742_4064390_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA
AXK11352.1\|4068241_4069318_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
AXK11353.1\|4069328_4070138_-	transcriptional regulator	NA	NA	NA	NA
AXK11354.1\|4070227_4071001_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
AXK11355.1\|4071182_4072133_+\|transposase	IS481-like element IS481 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031113

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection