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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031325 Neisseria polysaccharea strain M18661 chromosome, complete genome 4 crisprs NA 2 37 0 0

Results visualization

1. CP031325
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031325_1 500383-500514 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031325_2 882369-882475 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031325_3 1185617-1185752 Orphan I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031325_4 1639553-1645003 Orphan NA
82 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP031325_4 4.44|1642422|32|CP031325|CRISPRCasFinder,CRT 1642422-1642453 32 CP031325.1 13298-13329 0 1.0
CP031325_4 4.126|1642422|33|CP031325|PILER-CR 1642422-1642454 33 CP031325.1 13297-13329 0 1.0

1. spacer 4.44|1642422|32|CP031325|CRISPRCasFinder,CRT matches to position: 13298-13329, mismatch: 0, identity: 1.0

gctggatcaggatttggcttggcagtttgccc	CRISPR spacer
gctggatcaggatttggcttggcagtttgccc	Protospacer
********************************

2. spacer 4.126|1642422|33|CP031325|PILER-CR matches to position: 13297-13329, mismatch: 0, identity: 1.0

gctggatcaggatttggcttggcagtttgcccg	CRISPR spacer
gctggatcaggatttggcttggcagtttgcccg	Protospacer
*********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP031325_4 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT 1640907-1640941 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 6723-6757 0 1.0
CP031325_4 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT 1640907-1640941 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 837-871 0 1.0
CP031325_4 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT 1641170-1641203 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1235-1268 0 1.0
CP031325_4 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT 1641170-1641203 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 6327-6360 0 1.0
CP031325_4 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT 1643479-1643513 35 NC_010922 Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence 596-630 0 1.0
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 4470-4503 0 1.0
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 3091-3124 0 1.0
CP031325_4 4.142|1643479|36|CP031325|PILER-CR 1643479-1643514 36 NC_010922 Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence 596-631 0 1.0
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5656-5689 1 0.971
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1906-1939 1 0.971
CP031325_4 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT 1643479-1643513 35 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 950-984 1 0.971
CP031325_4 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT 1643479-1643513 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 1199-1233 1 0.971
CP031325_4 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT 1643479-1643513 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 6360-6394 1 0.971
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 2895-2928 1 0.971
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 3145-3178 1 0.971
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 4416-4449 1 0.971
CP031325_4 4.103|1640907|36|CP031325|PILER-CR 1640907-1640942 36 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 836-871 1 0.972
CP031325_4 4.103|1640907|36|CP031325|PILER-CR 1640907-1640942 36 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 6723-6758 1 0.972
CP031325_4 4.107|1641170|35|CP031325|PILER-CR 1641170-1641204 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1235-1269 1 0.971
CP031325_4 4.107|1641170|35|CP031325|PILER-CR 1641170-1641204 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 6326-6360 1 0.971
CP031325_4 4.142|1643479|36|CP031325|PILER-CR 1643479-1643514 36 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 950-985 1 0.972
CP031325_4 4.142|1643479|36|CP031325|PILER-CR 1643479-1643514 36 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 1199-1234 1 0.972
CP031325_4 4.142|1643479|36|CP031325|PILER-CR 1643479-1643514 36 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 6359-6394 1 0.972
CP031325_4 4.150|1644012|35|CP031325|PILER-CR 1644012-1644046 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 4469-4503 1 0.971
CP031325_4 4.150|1644012|35|CP031325|PILER-CR 1644012-1644046 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 3091-3125 1 0.971
CP031325_4 4.153|1644209|35|CP031325|PILER-CR 1644209-1644243 35 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 2894-2928 1 0.971
CP031325_4 4.153|1644209|35|CP031325|PILER-CR 1644209-1644243 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 3144-3178 1 0.971
CP031325_4 4.153|1644209|35|CP031325|PILER-CR 1644209-1644243 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 4416-4450 1 0.971
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 5821-5854 2 0.941
CP031325_4 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT 1640907-1640941 35 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 6889-6923 2 0.943
CP031325_4 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT 1641170-1641203 34 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 6492-6525 2 0.941
CP031325_4 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT 1642686-1642719 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5907-5940 2 0.941
CP031325_4 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT 1642686-1642719 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1655-1688 2 0.941
CP031325_4 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT 1642752-1642785 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5907-5940 2 0.941
CP031325_4 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT 1642752-1642785 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1655-1688 2 0.941
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5655-5689 2 0.943
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1906-1940 2 0.943
CP031325_4 4.130|1642686|35|CP031325|PILER-CR 1642686-1642720 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5906-5940 2 0.943
CP031325_4 4.130|1642686|35|CP031325|PILER-CR 1642686-1642720 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1655-1689 2 0.943
CP031325_4 4.131|1642752|35|CP031325|PILER-CR 1642752-1642786 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 5906-5940 2 0.943
CP031325_4 4.131|1642752|35|CP031325|PILER-CR 1642752-1642786 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 1655-1689 2 0.943
CP031325_4 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT 1640907-1640941 35 NC_010922 Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence 2953-2987 3 0.914
CP031325_4 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT 1643413-1643446 34 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 351-384 3 0.912
CP031325_4 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT 1643413-1643446 34 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 7212-7245 3 0.912
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 5820-5854 3 0.914
CP031325_4 4.103|1640907|36|CP031325|PILER-CR 1640907-1640942 36 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 6889-6924 3 0.917
CP031325_4 4.107|1641170|35|CP031325|PILER-CR 1641170-1641204 35 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 6491-6525 3 0.914
CP031325_4 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT 1643413-1643446 34 NC_010923 Neisseria lactamica plasmid pNL9, complete sequence 8178-8211 4 0.882
CP031325_4 4.103|1640907|36|CP031325|PILER-CR 1640907-1640942 36 NC_010922 Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence 2953-2988 4 0.889
CP031325_4 4.141|1643413|35|CP031325|PILER-CR 1643413-1643447 35 NC_004758 Neisseria meningitidis plasmid pJS-B, complete sequence 7212-7245 4 0.886
CP031325_4 4.141|1643413|35|CP031325|PILER-CR 1643413-1643447 35 ADWM02000138 Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence 350-384 4 0.886
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 NZ_CP031118 Providencia sp. WCHPHu000369 strain WCHPr000369 plasmid p1_000369, complete sequence 22120-22153 5 0.853
CP031325_4 4.153|1644209|35|CP031325|PILER-CR 1644209-1644243 35 NZ_CP031118 Providencia sp. WCHPHu000369 strain WCHPr000369 plasmid p1_000369, complete sequence 22119-22153 6 0.829
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 NZ_CP032091 Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence 248587-248620 7 0.794
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 AP014412 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S28-C111, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces 673-706 8 0.765
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 AP013637 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S32-C130, *** SEQUENCING IN PROGRESS *** 10761-10794 8 0.765
CP031325_4 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT 1640045-1640078 34 AP014413 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S45-C137, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces 10627-10660 8 0.765
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 MN694659 Marine virus AFVG_250M322, complete genome 5010-5044 8 0.771
CP031325_4 4.31|1641564|33|CP031325|CRISPRCasFinder,CRT 1641564-1641596 33 NC_024210 Escherichia phage e4/1c, complete genome 28002-28034 8 0.758
CP031325_4 4.34|1641761|33|CP031325|CRISPRCasFinder,CRT 1641761-1641793 33 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 45120-45152 8 0.758
CP031325_4 4.51|1642884|34|CP031325|CRISPRCasFinder,CRT 1642884-1642917 34 AP014927 Ralstonia phage RSF1 DNA, complete genome 19610-19643 8 0.765
CP031325_4 4.61|1643546|34|CP031325|CRISPRCasFinder,CRT 1643546-1643579 34 MN694612 Marine virus AFVG_250M404, complete genome 21075-21108 8 0.765
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 NC_048173 Erwinia phage Derbicus, complete genome 34751-34784 8 0.765
CP031325_4 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT 1644209-1644242 34 NC_031007 Erwinia phage vB_EamM_EarlPhillipIV, complete genome 34734-34767 8 0.765
CP031325_4 4.73|1644341|34|CP031325|CRISPRCasFinder,CRT 1644341-1644374 34 CP037991 Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence 35664-35697 8 0.765
CP031325_4 4.77|1644606|34|CP031325|CRISPRCasFinder,CRT,PILER-CR 1644606-1644639 34 CP037991 Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence 35664-35697 8 0.765
CP031325_4 4.116|1641761|34|CP031325|PILER-CR 1641761-1641794 34 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 45120-45153 8 0.765
CP031325_4 4.116|1641761|34|CP031325|PILER-CR 1641761-1641794 34 NZ_CP045276 Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence 66120-66153 8 0.765
CP031325_4 4.143|1643546|35|CP031325|PILER-CR 1643546-1643580 35 MN694612 Marine virus AFVG_250M404, complete genome 21074-21108 8 0.771
CP031325_4 4.150|1644012|35|CP031325|PILER-CR 1644012-1644046 35 NZ_CP032091 Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence 248586-248620 8 0.771
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 NZ_CP009044 Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence 40269-40303 9 0.743
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 NC_019507 Campylobacter phage CP21, complete genome 138583-138617 9 0.743
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 HE815464 Campylobacter phage CP21 complete sequence 138583-138617 9 0.743
CP031325_4 4.23|1641041|32|CP031325|CRISPRCasFinder,CRT 1641041-1641072 32 NZ_CP049814 Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence 53516-53547 9 0.719
CP031325_4 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT 1641236-1641268 33 NZ_CP016798 Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence 6012-6044 9 0.727
CP031325_4 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT 1642686-1642719 34 MT362618 Microcystis phage MaeS, complete genome 30804-30837 9 0.735
CP031325_4 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT 1642752-1642785 34 MT362618 Microcystis phage MaeS, complete genome 30804-30837 9 0.735
CP031325_4 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT 1643347-1643380 34 NC_047860 Caulobacter phage Lullwater, complete genome 33947-33980 9 0.735
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 AP013637 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S32-C130, *** SEQUENCING IN PROGRESS *** 10761-10795 9 0.743
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 AP014413 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S45-C137, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces 10627-10661 9 0.743
CP031325_4 4.90|1640045|35|CP031325|PILER-CR 1640045-1640079 35 AP014412 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S28-C111, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces 672-706 9 0.743
CP031325_4 4.104|1640974|36|CP031325|PILER-CR 1640974-1641009 36 MN694659 Marine virus AFVG_250M322, complete genome 5010-5045 9 0.75
CP031325_4 4.113|1641564|34|CP031325|PILER-CR 1641564-1641597 34 NC_024210 Escherichia phage e4/1c, complete genome 28001-28034 9 0.735
CP031325_4 4.140|1643347|35|CP031325|PILER-CR 1643347-1643381 35 NC_047860 Caulobacter phage Lullwater, complete genome 33946-33980 9 0.743
CP031325_4 4.155|1644341|35|CP031325|PILER-CR 1644341-1644375 35 CP037991 Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence 35663-35697 9 0.743
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 NZ_CP034578 Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08E, complete sequence 5633-5667 10 0.714
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 NZ_CP016720 Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11A, complete sequence 26202-26236 10 0.714
CP031325_4 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT 1640974-1641008 35 NC_018688 Bacillus thuringiensis MC28 plasmid pMC319, complete sequence 115647-115681 10 0.714
CP031325_4 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT 1641236-1641268 33 NZ_CP019739 Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence 18704-18736 10 0.697
CP031325_4 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT 1641236-1641268 33 NC_047983 Lactobacillus phage Lb, complete genome 43239-43271 10 0.697
CP031325_4 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT 1643347-1643380 34 NZ_HG938354 Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence 857242-857275 10 0.706
CP031325_4 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT 1643347-1643380 34 NZ_HG938356 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence 954931-954964 10 0.706
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 JX409894 Streptococcus phage LYGO9, complete genome 5602-5635 10 0.706
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 LC121098 Klebsiella phage K64-1 S1-2 gene for tail spike protein, complete cds 1181-1214 10 0.706
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 AB897757 Klebsiella phage K64-1 DNA, complete genome 322590-322623 10 0.706
CP031325_4 4.82|1644936|36|CP031325|CRISPRCasFinder,CRT,PILER-CR 1644936-1644971 36 NZ_CP040343 Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence 97640-97675 10 0.722
CP031325_4 4.104|1640974|36|CP031325|PILER-CR 1640974-1641009 36 NZ_CP009044 Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence 40269-40304 10 0.722
CP031325_4 4.105|1641041|33|CP031325|PILER-CR 1641041-1641073 33 NZ_CP049814 Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence 53516-53548 10 0.697
CP031325_4 4.108|1641236|34|CP031325|PILER-CR 1641236-1641269 34 NZ_CP016798 Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence 6012-6045 10 0.706
CP031325_4 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT 1644012-1644045 34 CP012553 Campylobacter sp. RM16192 plasmid p16192, complete sequence 25335-25368 11 0.676
CP031325_4 4.104|1640974|36|CP031325|PILER-CR 1640974-1641009 36 NZ_CP034578 Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08E, complete sequence 5632-5667 11 0.694
CP031325_4 4.104|1640974|36|CP031325|PILER-CR 1640974-1641009 36 NZ_CP016720 Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11A, complete sequence 26202-26237 11 0.694
CP031325_4 4.108|1641236|34|CP031325|PILER-CR 1641236-1641269 34 NZ_CP019739 Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence 18704-18737 11 0.676
CP031325_4 4.108|1641236|34|CP031325|PILER-CR 1641236-1641269 34 NC_047983 Lactobacillus phage Lb, complete genome 43239-43272 11 0.676

1. spacer 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 0, identity: 1.0

cccgttgcctgtgtcaaatcgtcaaattcatgcaa	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcatgcaa	Protospacer
***********************************

2. spacer 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

cccgttgcctgtgtcaaatcgtcaaattcatgcaa	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcatgcaa	Protospacer
***********************************

3. spacer 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

cgctgatttataaagcccgaacgcctttttatcc	CRISPR spacer
cgctgatttataaagcccgaacgcctttttatcc	Protospacer
**********************************

4. spacer 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgatttataaagcccgaacgcctttttatcc	CRISPR spacer
cgctgatttataaagcccgaacgcctttttatcc	Protospacer
**********************************

5. spacer 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT matches to NC_010922 (Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttggcattgatggcaagccgtctgatgctctc	CRISPR spacer
ttgttggcattgatggcaagccgtctgatgctctc	Protospacer
***********************************

6. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 0, identity: 1.0

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
acattaaaataacatgtattaaaaaaacatccta	Protospacer
**********************************

7. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 0, identity: 1.0

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
acattaaaataacatgtattaaaaaaacatccta	Protospacer
**********************************

8. spacer 4.142|1643479|36|CP031325|PILER-CR matches to NC_010922 (Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttggcattgatggcaagccgtctgatgctctct	CRISPR spacer
ttgttggcattgatggcaagccgtctgatgctctct	Protospacer
************************************

9. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
ccataggcgttttgaaaatatttcaaaatggcat	Protospacer
************************** *******

10. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
ccataggcgttttgaaaatatttcaaaatggcat	Protospacer
************************** *******

11. spacer 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 1, identity: 0.971

ttgttggcattgatggcaagccgtctgatgctctc	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctc	Protospacer
********************** ************

12. spacer 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

ttgttggcattgatggcaagccgtctgatgctctc	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctc	Protospacer
********************** ************

13. spacer 4.60|1643479|35|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

ttgttggcattgatggcaagccgtctgatgctctc	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctc	Protospacer
********************** ************

14. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggtta	CRISPR spacer
atttgctatttcctttcttcaaaaaaatcggtta	Protospacer
***************** ****************

15. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggtta	CRISPR spacer
atttgctatttcctttcgtcaaaaaaatcggtta	Protospacer
*****************.****************

16. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggtta	CRISPR spacer
atttgctatttcctttcgtcaaaaaaatcggtta	Protospacer
*****************.****************

17. spacer 4.103|1640907|36|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.972

cccgttgcctgtgtcaaatcgtcaaattcatgcaat	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcatgcaac	Protospacer
***********************************.

18. spacer 4.103|1640907|36|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.972

cccgttgcctgtgtcaaatcgtcaaattcatgcaat	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcatgcaac	Protospacer
***********************************.

19. spacer 4.107|1641170|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

cgctgatttataaagcccgaacgcctttttatcct	CRISPR spacer
cgctgatttataaagcccgaacgcctttttatcca	Protospacer
********************************** 

20. spacer 4.107|1641170|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

cgctgatttataaagcccgaacgcctttttatcct	CRISPR spacer
cgctgatttataaagcccgaacgcctttttatcca	Protospacer
********************************** 

21. spacer 4.142|1643479|36|CP031325|PILER-CR matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 1, identity: 0.972

ttgttggcattgatggcaagccgtctgatgctctct	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctct	Protospacer
********************** *************

22. spacer 4.142|1643479|36|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.972

ttgttggcattgatggcaagccgtctgatgctctct	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctct	Protospacer
********************** *************

23. spacer 4.142|1643479|36|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.972

ttgttggcattgatggcaagccgtctgatgctctct	CRISPR spacer
ttgttggcattgatggcaagccttctgatgctctct	Protospacer
********************** *************

24. spacer 4.150|1644012|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

acattaaaataacatgtattaaaaaaacatcctat	CRISPR spacer
acattaaaataacatgtattaaaaaaacatcctaa	Protospacer
********************************** 

25. spacer 4.150|1644012|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

acattaaaataacatgtattaaaaaaacatcctat	CRISPR spacer
acattaaaataacatgtattaaaaaaacatcctaa	Protospacer
********************************** 

26. spacer 4.153|1644209|35|CP031325|PILER-CR matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggttat	CRISPR spacer
atttgctatttcctttcttcaaaaaaatcggttat	Protospacer
***************** *****************

27. spacer 4.153|1644209|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggttat	CRISPR spacer
atttgctatttcctttcgtcaaaaaaatcggttat	Protospacer
*****************.*****************

28. spacer 4.153|1644209|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.971

atttgctatttcctttcatcaaaaaaatcggttat	CRISPR spacer
atttgctatttcctttcgtcaaaaaaatcggttat	Protospacer
*****************.*****************

29. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 2, identity: 0.941

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
ccataagcattttgaaaatatttcaatatggcat	Protospacer
*****.**.*************************

30. spacer 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 2, identity: 0.943

cccgttgcctgtgtcaaatcgtcaaattcatgcaa	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcctgtaa	Protospacer
***************************** **.**

31. spacer 4.25|1641170|34|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 2, identity: 0.941

cgctgatttataaagcccgaacgcctttttatcc	CRISPR spacer
cgccgatttataaagcccaaacgcctttttatcc	Protospacer
***.**************.***************

32. spacer 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 2, identity: 0.941

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aataaaaatcttcctgtctttccactcattattt	Protospacer
***************.*************.****

33. spacer 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.941

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aataaaaatcttcctgtctttccactcattattt	Protospacer
***************.*************.****

34. spacer 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 2, identity: 0.941

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aataaaaatcttcctgtctttccactcattattt	Protospacer
***************.*************.****

35. spacer 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.941

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aataaaaatcttcctgtctttccactcattattt	Protospacer
***************.*************.****

36. spacer 4.90|1640045|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 2, identity: 0.943

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
ccataggcgttttgaaaatatttcaaaatggcatc	Protospacer
************************** *******.

37. spacer 4.90|1640045|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.943

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
ccataggcgttttgaaaatatttcaaaatggcatc	Protospacer
************************** *******.

38. spacer 4.130|1642686|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 2, identity: 0.943

aataaaaatcttcctatctttccactcatcattta	CRISPR spacer
aataaaaatcttcctgtctttccactcattattta	Protospacer
***************.*************.*****

39. spacer 4.130|1642686|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.943

aataaaaatcttcctatctttccactcatcattta	CRISPR spacer
aataaaaatcttcctgtctttccactcattattta	Protospacer
***************.*************.*****

40. spacer 4.131|1642752|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 2, identity: 0.943

aataaaaatcttcctatctttccactcatcattta	CRISPR spacer
aataaaaatcttcctgtctttccactcattattta	Protospacer
***************.*************.*****

41. spacer 4.131|1642752|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 2, identity: 0.943

aataaaaatcttcctatctttccactcatcattta	CRISPR spacer
aataaaaatcttcctgtctttccactcattattta	Protospacer
***************.*************.*****

42. spacer 4.21|1640907|35|CP031325|CRISPRCasFinder,CRT matches to NC_010922 (Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence) position: , mismatch: 3, identity: 0.914

cccgttgcctgtgtcaaatcgtcaaattcatgcaa	CRISPR spacer
cctgttgcctgtgtcaaatcgtcaaattcctgcca	Protospacer
**.************************** *** *

43. spacer 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 3, identity: 0.912

aaaataaaaatctttcggtttcagcccctacccc	CRISPR spacer
aaaataaaaatctttcggtttcagcccccgccct	Protospacer
****************************..***.

44. spacer 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 3, identity: 0.912

aaaataaaaatctttcggtttcagcccctacccc	CRISPR spacer
aaaataaaaatctttcggtttcagcccccgccct	Protospacer
****************************..***.

45. spacer 4.90|1640045|35|CP031325|PILER-CR matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 3, identity: 0.914

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
ccataagcattttgaaaatatttcaatatggcatc	Protospacer
*****.**.*************************.

46. spacer 4.103|1640907|36|CP031325|PILER-CR matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 3, identity: 0.917

cccgttgcctgtgtcaaatcgtcaaattcatgcaat	CRISPR spacer
cccgttgcctgtgtcaaatcgtcaaattcctgtaac	Protospacer
***************************** **.**.

47. spacer 4.107|1641170|35|CP031325|PILER-CR matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 3, identity: 0.914

cgctgatttataaagcccgaacgcctttttatcct	CRISPR spacer
cgccgatttataaagcccaaacgcctttttatcca	Protospacer
***.**************.*************** 

48. spacer 4.59|1643413|34|CP031325|CRISPRCasFinder,CRT matches to NC_010923 (Neisseria lactamica plasmid pNL9, complete sequence) position: , mismatch: 4, identity: 0.882

aaaataaaaatctttcggtttcagcccctacccc	CRISPR spacer
taaataaaaatctttcggtttcagccccctgccc	Protospacer
 ***************************.  ***

49. spacer 4.103|1640907|36|CP031325|PILER-CR matches to NC_010922 (Neisseria lactamica isolate 3207487 plasmid pNL3.2, complete sequence) position: , mismatch: 4, identity: 0.889

cccgttgcctgtgtcaaatcgtcaaattcatgcaat	CRISPR spacer
cctgttgcctgtgtcaaatcgtcaaattcctgccac	Protospacer
**.************************** *** *.

50. spacer 4.141|1643413|35|CP031325|PILER-CR matches to NC_004758 (Neisseria meningitidis plasmid pJS-B, complete sequence) position: , mismatch: 4, identity: 0.886

aaaataaaaatctttcggtttcagcccctacccct	CRISPR spacer
aaaataaaaatctttcggtttcagcccccgccct-	Protospacer
****************************..***. 

51. spacer 4.141|1643413|35|CP031325|PILER-CR matches to ADWM02000138 (Neisseria meningitidis K1207 plasmid, complete sequence, whole genome shotgun sequence) position: , mismatch: 4, identity: 0.886

aaaataaaaatctttcggtttcagcccctacccct	CRISPR spacer
aaaataaaaatctttcggtttcagcccccgccctc	Protospacer
****************************..***..

52. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to NZ_CP031118 (Providencia sp. WCHPHu000369 strain WCHPr000369 plasmid p1_000369, complete sequence) position: , mismatch: 5, identity: 0.853

atttgctatttcc-tttcatcaaaaaaatcggtta	CRISPR spacer
-tttgaaattttcatttcatcaataaaatcggtta	Protospacer
 ****  ****.* ********* ***********

53. spacer 4.153|1644209|35|CP031325|PILER-CR matches to NZ_CP031118 (Providencia sp. WCHPHu000369 strain WCHPr000369 plasmid p1_000369, complete sequence) position: , mismatch: 6, identity: 0.829

atttgctatttcc-tttcatcaaaaaaatcggttat	CRISPR spacer
-tttgaaattttcatttcatcaataaaatcggttaa	Protospacer
 ****  ****.* ********* *********** 

54. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.794

acattaaaataacatgtattaaaaaaacatccta-	CRISPR spacer
acattaaaataagaagtatt-aaaaagcacctgaa	Protospacer
************ * ***** *****.**.*. * 

55. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to AP014412 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S28-C111, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 8, identity: 0.765

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgat	Protospacer
 ********************. ****.    **

56. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to AP013637 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S32-C130, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.765

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgat	Protospacer
 ********************. ****.    **

57. spacer 4.8|1640045|34|CP031325|CRISPRCasFinder,CRT matches to AP014413 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S45-C137, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 8, identity: 0.765

ccataggcgttttgaaaatatttcaatatggcat	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgat	Protospacer
 ********************. ****.    **

58. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to MN694659 (Marine virus AFVG_250M322, complete genome) position: , mismatch: 8, identity: 0.771

atctaataacataatatattataaaataaaatatt	CRISPR spacer
cgataataacaaattatattataaaataaaatggg	Protospacer
   ******** * ******************.  

59. spacer 4.31|1641564|33|CP031325|CRISPRCasFinder,CRT matches to NC_024210 (Escherichia phage e4/1c, complete genome) position: , mismatch: 8, identity: 0.758

aaaacctgaatactggattgaggatatgcatga	CRISPR spacer
taaacctgaatactggatttagaattagaaggt	Protospacer
 ****************** **.**  * * * 

60. spacer 4.34|1641761|33|CP031325|CRISPRCasFinder,CRT matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 8, identity: 0.758

tctatttcataaattaaaaacaaaattcgggaa-----	CRISPR spacer
tttattttagaaattaaaaacaaaat-----aattttt	Protospacer
*.*****.* ****************     **     

61. spacer 4.51|1642884|34|CP031325|CRISPRCasFinder,CRT matches to AP014927 (Ralstonia phage RSF1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

cctgcgccgtaacgttgcaaacgatgttgcaagc	CRISPR spacer
ccagacccgtaacgtcgtaaacgatgttgcggtc	Protospacer
** *  *********.*.************.. *

62. spacer 4.61|1643546|34|CP031325|CRISPRCasFinder,CRT matches to MN694612 (Marine virus AFVG_250M404, complete genome) position: , mismatch: 8, identity: 0.765

cgtctgggctaccaggcgttaaccaatcgccatc-	CRISPR spacer
tttctgtgctaccatgcgttaaccaat-gctgttt	Protospacer
. **** ******* ************ **..*. 

63. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to NC_048173 (Erwinia phage Derbicus, complete genome) position: , mismatch: 8, identity: 0.765

atttgctatttcctttcatcaaaaaaatcggtta	CRISPR spacer
atcggctatttccttttatcaaaaaaataagggt	Protospacer
**. ************.*********** .*   

64. spacer 4.71|1644209|34|CP031325|CRISPRCasFinder,CRT matches to NC_031007 (Erwinia phage vB_EamM_EarlPhillipIV, complete genome) position: , mismatch: 8, identity: 0.765

atttgctatttcctttcatcaaaaaaatcggtta	CRISPR spacer
atcggctatttccttttatcaaaaaaataagggt	Protospacer
**. ************.*********** .*   

65. spacer 4.73|1644341|34|CP031325|CRISPRCasFinder,CRT matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cttttaaatatttatttttgcacggatttaagtg	CRISPR spacer
atatcacctatttatttttgcacgcattttagta	Protospacer
 * *.*  **************** **** ***.

66. spacer 4.77|1644606|34|CP031325|CRISPRCasFinder,CRT,PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

cttttaaatatttatttttgcacggatttaagtg	CRISPR spacer
atatcacctatttatttttgcacgcattttagta	Protospacer
 * *.*  **************** **** ***.

67. spacer 4.116|1641761|34|CP031325|PILER-CR matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 8, identity: 0.765

tctatttcataaattaaaaacaaaattcgggaat-----	CRISPR spacer
tttattttagaaattaaaaacaaaat-----aattttta	Protospacer
*.*****.* ****************     ***     

68. spacer 4.116|1641761|34|CP031325|PILER-CR matches to NZ_CP045276 (Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence) position: , mismatch: 8, identity: 0.765

tctatttcataaattaaaaacaaaattcgggaat	CRISPR spacer
tgaatacgacaaattcaaaaaaaaattcgggaat	Protospacer
*  ** . *.***** **** *************

69. spacer 4.143|1643546|35|CP031325|PILER-CR matches to MN694612 (Marine virus AFVG_250M404, complete genome) position: , mismatch: 8, identity: 0.771

cgtctgggctaccaggcgttaaccaatcgccatct-	CRISPR spacer
tttctgtgctaccatgcgttaaccaat-gctgttta	Protospacer
. **** ******* ************ **..*.* 

70. spacer 4.150|1644012|35|CP031325|PILER-CR matches to NZ_CP032091 (Pseudoalteromonas donghaensis strain HJ51 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

acattaaaataacatgtattaaaaaaacatcctat-	CRISPR spacer
acattaaaataagaagtatt-aaaaagcacctgaac	Protospacer
************ * ***** *****.**.*. *  

71. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to NZ_CP009044 (Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence) position: , mismatch: 9, identity: 0.743

atctaataacataatatattataaaataaaatatt	CRISPR spacer
agattttagcataatatattctaaaataaaattaa	Protospacer
*  *  **.*********** ***********   

72. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 9, identity: 0.743

atctaataacataatatattataaaataaaatatt	CRISPR spacer
cctttttaatataatatattataatataaaaactt	Protospacer
 ..*  ***.************** ******  **

73. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 9, identity: 0.743

atctaataacataatatattataaaataaaatatt	CRISPR spacer
cctttttaatataatatattataatataaaaactt	Protospacer
 ..*  ***.************** ******  **

74. spacer 4.23|1641041|32|CP031325|CRISPRCasFinder,CRT matches to NZ_CP049814 (Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

catctataccaatcctcaaggttgggttttcg	CRISPR spacer
ggactataccaatcctcatggttgtgtctggc	Protospacer
 . *************** ***** **.*   

75. spacer 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT matches to NZ_CP016798 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence) position: , mismatch: 9, identity: 0.727

cttcaaaaaatcaacatcgtcagcaagcaggaa	CRISPR spacer
gcgcaaaaaatcatcatcgtcatcaagccgtgt	Protospacer
 . ********** ******** ***** * . 

76. spacer 4.48|1642686|34|CP031325|CRISPRCasFinder,CRT matches to MT362618 (Microcystis phage MaeS, complete genome) position: , mismatch: 9, identity: 0.735

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aatcaaaatcttcttatctttccaagaaggagtg	Protospacer
*** *********.**********   *  * * 

77. spacer 4.49|1642752|34|CP031325|CRISPRCasFinder,CRT matches to MT362618 (Microcystis phage MaeS, complete genome) position: , mismatch: 9, identity: 0.735

aataaaaatcttcctatctttccactcatcattt	CRISPR spacer
aatcaaaatcttcttatctttccaagaaggagtg	Protospacer
*** *********.**********   *  * * 

78. spacer 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT matches to NC_047860 (Caulobacter phage Lullwater, complete genome) position: , mismatch: 9, identity: 0.735

taggaagccgtcaacaacgctctcaccgtagaac	CRISPR spacer
atggaagtcgtcaacaacgctcacacctttatcc	Protospacer
  *****.************** **** * .  *

79. spacer 4.90|1640045|35|CP031325|PILER-CR matches to AP013637 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S32-C130, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.743

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgata	Protospacer
 ********************. ****.    ** 

80. spacer 4.90|1640045|35|CP031325|PILER-CR matches to AP014413 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S45-C137, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 9, identity: 0.743

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgata	Protospacer
 ********************. ****.    ** 

81. spacer 4.90|1640045|35|CP031325|PILER-CR matches to AP014412 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C28A-MedDCM-OCT-S28-C111, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 9, identity: 0.743

ccataggcgttttgaaaatatttcaatatggcatt	CRISPR spacer
gcataggcgttttgaaaatatcgcaatggtcgata	Protospacer
 ********************. ****.    ** 

82. spacer 4.104|1640974|36|CP031325|PILER-CR matches to MN694659 (Marine virus AFVG_250M322, complete genome) position: , mismatch: 9, identity: 0.75

atctaataacataatatattataaaataaaatattt	CRISPR spacer
cgataataacaaattatattataaaataaaatggga	Protospacer
   ******** * ******************.   

83. spacer 4.113|1641564|34|CP031325|PILER-CR matches to NC_024210 (Escherichia phage e4/1c, complete genome) position: , mismatch: 9, identity: 0.735

aaaacctgaatactggattgaggatatgcatgat	CRISPR spacer
taaacctgaatactggatttagaattagaaggtc	Protospacer
 ****************** **.**  * * * .

84. spacer 4.140|1643347|35|CP031325|PILER-CR matches to NC_047860 (Caulobacter phage Lullwater, complete genome) position: , mismatch: 9, identity: 0.743

taggaagccgtcaacaacgctctcaccgtagaact	CRISPR spacer
atggaagtcgtcaacaacgctcacacctttatcct	Protospacer
  *****.************** **** * .  **

85. spacer 4.155|1644341|35|CP031325|PILER-CR matches to CP037991 (Bacillus mycoides strain TH26 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

cttttaaatatttatttttgcacggatttaagtgc	CRISPR spacer
atatcacctatttatttttgcacgcattttagtaa	Protospacer
 * *.*  **************** **** ***. 

86. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to NZ_CP034578 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08E, complete sequence) position: , mismatch: 10, identity: 0.714

atctaataacataatatattataaaataaaatatt	CRISPR spacer
gttcttaaacatattatattaaaaaataaaataaa	Protospacer
.*..   ****** ******* ***********  

87. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to NZ_CP016720 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11A, complete sequence) position: , mismatch: 10, identity: 0.714

atctaataacataatatattataaaataaaatatt	CRISPR spacer
gttcttaaacatattatattaaaaaataaaataaa	Protospacer
.*..   ****** ******* ***********  

88. spacer 4.22|1640974|35|CP031325|CRISPRCasFinder,CRT matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 10, identity: 0.714

atctaataacataatatattataaaataaaatatt	CRISPR spacer
tcttgaaaacatactatattataaaattaaattaa	Protospacer
 ..*.* ****** ************* ****   

89. spacer 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT matches to NZ_CP019739 (Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence) position: , mismatch: 10, identity: 0.697

cttcaaaaaatcaacatcgtcagcaagcaggaa	CRISPR spacer
acgtaaaaaatcatcatcgtcatcaagccgcgt	Protospacer
 . .********* ******** ***** * . 

90. spacer 4.26|1641236|33|CP031325|CRISPRCasFinder,CRT matches to NC_047983 (Lactobacillus phage Lb, complete genome) position: , mismatch: 10, identity: 0.697

cttcaaaaaatcaacatcgtcagcaagcaggaa	CRISPR spacer
gcgcaaaaaatcatcatcgtcatcaaggcgtgt	Protospacer
 . ********** ******** ****  * . 

91. spacer 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.706

taggaagccgtcaacaacgctctcaccgtagaac	CRISPR spacer
caggaagccgtcaacaacgccatcaggcacggcc	Protospacer
.*******************. ***     *. *

92. spacer 4.58|1643347|34|CP031325|CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 10, identity: 0.706

taggaagccgtcaacaacgctctcaccgtagaac	CRISPR spacer
caggaagccgtcaacaacgccatcaggcacggcc	Protospacer
.*******************. ***     *. *

93. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 10, identity: 0.706

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
gcattaaaataacatttattgaaaatcagttgtc	Protospacer
.************** ****.****   .*. * 

94. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to LC121098 (Klebsiella phage K64-1 S1-2 gene for tail spike protein, complete cds) position: , mismatch: 10, identity: 0.706

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
gttttaaaaaaatatgtattaaaaaaattatcca	Protospacer
.. ****** **.**************.  .*.*

95. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 10, identity: 0.706

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
gttttaaaaaaatatgtattaaaaaaattatcca	Protospacer
.. ****** **.**************.  .*.*

96. spacer 4.82|1644936|36|CP031325|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040343 (Bacillus cereus strain DLOU-Weihai plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.722

ccgcgcaaaataaaacgttgccccgatt------tgccggct	CRISPR spacer
ttgcccaaaataaaacattgccccgattaaaatctg------	Protospacer
..** ***********.***********      **      

97. spacer 4.104|1640974|36|CP031325|PILER-CR matches to NZ_CP009044 (Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence) position: , mismatch: 10, identity: 0.722

atctaataacataatatattataaaataaaatattt	CRISPR spacer
agattttagcataatatattctaaaataaaattaaa	Protospacer
*  *  **.*********** ***********    

98. spacer 4.105|1641041|33|CP031325|PILER-CR matches to NZ_CP049814 (Monaibacterium sp. ALG8 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

catctataccaatcctcaaggttgggttttcgg	CRISPR spacer
ggactataccaatcctcatggttgtgtctggca	Protospacer
 . *************** ***** **.*   .

99. spacer 4.108|1641236|34|CP031325|PILER-CR matches to NZ_CP016798 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence) position: , mismatch: 10, identity: 0.706

cttcaaaaaatcaacatcgtcagcaagcaggaat	CRISPR spacer
gcgcaaaaaatcatcatcgtcatcaagccgtgtg	Protospacer
 . ********** ******** ***** * .  

100. spacer 4.68|1644012|34|CP031325|CRISPRCasFinder,CRT matches to CP012553 (Campylobacter sp. RM16192 plasmid p16192, complete sequence) position: , mismatch: 11, identity: 0.676

acattaaaataacatgtattaaaaaaacatccta	CRISPR spacer
tttaaaaaataacttgtattaaaaaagcaaattt	Protospacer
 .   ******** ************.**  .* 

101. spacer 4.104|1640974|36|CP031325|PILER-CR matches to NZ_CP034578 (Lactococcus lactis subsp. lactis strain UC08 plasmid pUC08E, complete sequence) position: , mismatch: 11, identity: 0.694

atctaataacataatatattataaaataaaatattt	CRISPR spacer
gttcttaaacatattatattaaaaaataaaataaaa	Protospacer
.*..   ****** ******* ***********   

102. spacer 4.104|1640974|36|CP031325|PILER-CR matches to NZ_CP016720 (Lactococcus lactis subsp. lactis strain UC11 plasmid pUC11A, complete sequence) position: , mismatch: 11, identity: 0.694

atctaataacataatatattataaaataaaatattt	CRISPR spacer
gttcttaaacatattatattaaaaaataaaataaaa	Protospacer
.*..   ****** ******* ***********   

103. spacer 4.108|1641236|34|CP031325|PILER-CR matches to NZ_CP019739 (Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence) position: , mismatch: 11, identity: 0.676

cttcaaaaaatcaacatcgtcagcaagcaggaat	CRISPR spacer
acgtaaaaaatcatcatcgtcatcaagccgcgta	Protospacer
 . .********* ******** ***** * .  

104. spacer 4.108|1641236|34|CP031325|PILER-CR matches to NC_047983 (Lactobacillus phage Lb, complete genome) position: , mismatch: 11, identity: 0.676

cttcaaaaaatcaacatcgtcagcaagcaggaat	CRISPR spacer
gcgcaaaaaatcatcatcgtcatcaaggcgtgtg	Protospacer
 . ********** ******** ****  * .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage