CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031328	Neisseria meningitidis strain M18755 chromosome, complete genome	14 crisprs	NA	11	11	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031328_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_1

12783-12961

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCGCGCAGGCGGGAATCCAGAC	PILER-CR

2 spacers

The CRISPR arrays of CP031328_1

>merge|CP031328|1|12783-12961|PILER-CR
CCGTCATTCCCGCGCAGGCGGGAATCCGGCTTGTTCGGTTTCGGTTTTGGTTTTTTTTGAGGTTTCGGGCAACTTCTAAACCGTCATTCCCGCGCAGGCGGGAATCTAGACCTTAGAACAACAGCAATATTCAAAGATTATAAAAGACCTGTCATTCCCGCGCAGGCGGGAATCCAGAC

>CP031328|1|1|12783-12961|PILER-CR
CCGTCATTCCCGCGCAGGCGGGAATCCGGCT	TGTTCGGTTTCGGTTTTGGTTTTTTTTGAGGTTTCGGGCAACTTCTAAACCGT
CATTCCCGCGCAGGCGGGAATCTAGACCTTA	GAACAACAGCAATATTCAAAGATTATAAAAGACCTGT
CATTCCCGCGCAGGCGGGAATCCAGAC

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Crispr_ID: CP031328_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_2

223019-223099

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCTACGAAAGTGGGAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_2

>merge|CP031328|2|223019-223099|CRISPRCasFinder
CCGTCATTCCTACGAAAGTGGGAATCTAGAACGCGGGGTTAAGAAAACCTGCATCCCGTCATTCCCACGAAAGTGGGAATC

>CP031328|2|1|223019-223099|CRISPRCasFinder
CCGTCATTCCTACGAAAGTGGGAATC	TAGAACGCGGGGTTAAGAAAACCTGCATC
CCGTCATTCCCACGAAAGTGGGAATC

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Crispr_ID: CP031328_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_3

226938-227119

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCACGAAAGTGGGAATC	PILER-CR

2 spacers

The CRISPR arrays of CP031328_3

>merge|CP031328|3|226938-227119|PILER-CR
CCGTCATTCCCACGAAAGTGGGAATCCAGGACGCAAAATCTCAAGAAACCGTTTTACCCGATAAGTTTCCGCACCGACAGACCTAGATTCCCGCCTGCGCGGGAATGACGGGATTTGAGGTTGCGGCATTTATCGGGAGCAACAGAATCCGCTCTGCCGTCATTCCCACGAAAGTGGGAATC

>CP031328|3|2|226938-227119|PILER-CR
CCGTCATTCCCACGAAAGTGGGAATC	CAGGACGCAAAATCTCAAGAAACCGTTTTACCCGATAAGTTTCCGCACCGACAGACCTAG
ATTCCCGCCTGCGCGGGAATGACGGG	ATTTGAGGTTGCGGCATTTATCGGGAGCAACAGAATCCGCTCTGCCGTCATTCCCACGAAAGTG
GGAATC

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Crispr_ID: CP031328_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_4

322135-322240

Orphan

Consensus_repeat	Method
CGAAGGCAAATGCGGCGAGGGCAAATGCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_4

>merge|CP031328|4|322135-322240|CRISPRCasFinder
CGAAGGCAAATGCGGCGAGGGCAAATGCGGTGCGACCGTAAAAAAAACCCACAAACACACCAAAGCATCTAAAGCCAAGGCCAAATCTGCCGAAGGCAAATGCGGC

>CP031328|4|2|322135-322240|CRISPRCasFinder
CGAAGGCAAATGCGGCGAGGGCAAATGCGGT	GCGACCGTAAAAAAAACCCACAAACACACCAAAGCATCTAAAGC
CAAGGCCAAATCTGCCGAAGGCAAATGCGGC

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Crispr_ID: CP031328_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_6

353479-353584

Orphan

I-E

Consensus_repeat	Method
CTAGATTCCCACTTTCGTGGGAATGACGGGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_6

>merge|CP031328|6|353479-353584|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGGCATCAGTCTGCCGTTTACAGCACGGTTTCTTTAGATTTTACGTTCTAGATTCCCGCCTGCGCGGGAATGACGAATCC

>CP031328|6|4|353479-353584|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGGCATC	AGTCTGCCGTTTACAGCACGGTTTCTTTAGATTTTACGTT
CTAGATTCCCGCCTGCGCGGGAATGACGAATCC

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Crispr_ID: CP031328_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_5

353254-353361

Orphan

I-E

Consensus_repeat	Method
CTAGATTCCCACTTTCGTGGGAATGACGGGATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_5

>merge|CP031328|5|353254-353361|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGGGATTAAAGTTTCAAAATTTATTCTAAATAACTGAAACTCAACGAACTAGATTCCCACTTTCGTGGGAATGACGGGATTT

>CP031328|5|3|353254-353361|CRISPRCasFinder
CTAGATTCCCACTTTCGTGGGAATGACGGGATT	AAAGTTTCAAAATTTATTCTAAATAACTGAAACTCAACGAA
CTAGATTCCCACTTTCGTGGGAATGACGGGATTT

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Crispr_ID: CP031328_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_7

380555-380655

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCGCGCAGGCGGGAATCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_7

>merge|CP031328|7|380555-380655|CRISPRCasFinder
CCGTCATTCCCGCGCAGGCGGGAATCCGGCTTGTTCGGTTTCGGTTTTTTTTGAGGTTTCGGGCAACTTCTAAACCGTCATTCCCGCGCAGGCGGGAATCC

>CP031328|7|5|380555-380655|CRISPRCasFinder
CCGTCATTCCCGCGCAGGCGGGAATCC	GGCTTGTTCGGTTTCGGTTTTTTTTGAGGTTTCGGGCAACTTCTAAA
CCGTCATTCCCGCGCAGGCGGGAATCC

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Crispr_ID: CP031328_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_9

667300-667380

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCGCGCAGGCGGTAATCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_9

>merge|CP031328|9|667300-667380|CRISPRCasFinder
CCGTCTTTCCCGCGCAGGCGGTAATCTGAACACGTCCGTAGTGAAACCTATATCCCGTCATTCGCACGAAAGTGGGAATCC

>CP031328|9|7|667300-667380|CRISPRCasFinder
CCGTCTTTCCCGCGCAGGCGGTAATCT	GAACACGTCCGTAGTGAAACCTATATC
CCGTCATTCGCACGAAAGTGGGAATCC

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Crispr_ID: CP031328_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_8

666958-667129

Orphan

I-E

Consensus_repeat	Method
CCGTCATTCCCGCGCAGGCGGTAATCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of CP031328_8

>merge|CP031328|8|666958-667129|CRISPRCasFinder
TCGTCATTCCCGCCCGCGCGGGAATCCGACTTGTCTGGTTTCGGTTATTTTTCGTTTCGTAACTTTTGAGCCGTCATTCCCGCGCAGGCGGTAATCCGGCTTGTTCGGTTTCGGTTCTTTTTCTCGTTTCGGGTGATTTCTAAACCGTCATTCCCGCGCAGGCGGGAATCCA

>CP031328|8|6|666958-667129|CRISPRCasFinder
TCGTCATTCCCGCCCGCGCGGGAATCC	GACTTGTCTGGTTTCGGTTATTTTTCGTTTCGTAACTTTTGAG
CCGTCATTCCCGCGCAGGCGGTAATCC	GGCTTGTTCGGTTTCGGTTCTTTTTCTCGTTTCGGGTGATTTCTAAA
CCGTCATTCCCGCGCAGGCGGGAATCCA

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Crispr_ID: CP031328_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_10

871413-871522

Orphan

I-E

Consensus_repeat	Method
CGTCATTCCCGCGCAGGCGGGAATCTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_10

>merge|CP031328|10|871413-871522|CRISPRCasFinder
CGTCATTCCCGCGCAGGCGGGAATCTAGGTCTGTCGGTGCGGAAACTTATCGGATAAAACGGTTTCTTGAGATTTTGCATCCCGTCATTCCCGCGCAGGCGGGAATCTAG

>CP031328|10|8|871413-871522|CRISPRCasFinder
CGTCATTCCCGCGCAGGCGGGAATCTAG	GTCTGTCGGTGCGGAAACTTATCGGATAAAACGGTTTCTTGAGATTTTGCATCC
CGTCATTCCCGCGCAGGCGGGAATCTAG

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Crispr_ID: CP031328_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_11

1057813-1057922

Orphan

Consensus_repeat	Method
GGTGGGCTGAAGCCCACCCTACGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_11

>merge|CP031328|11|1057813-1057922|CRISPRCasFinder
GGTGGGCTGAAGCCCACCCTACGCAATTGCTTTTGCGGAGATGACGGGGTTTTAGGGTGAAGATGGTGGGAGTTGGTGGGAGTTGGTGGGCTGAAGCCCACCCTACGCAA

>CP031328|11|9|1057813-1057922|CRISPRCasFinder
GGTGGGCTGAAGCCCACCCTACGCAA	TTGCTTTTGCGGAGATGACGGGGTTTTAGGGTGAAGATGGTGGGAGTTGGTGGGAGTT
GGTGGGCTGAAGCCCACCCTACGCAA

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Crispr_ID: CP031328_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_12

1616099-1616214

Orphan

Consensus_repeat	Method
AAAGCGGGAATCCAGCCCCCAACGCAACAGGAATCCATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_12

>merge|CP031328|12|1616099-1616214|CRISPRCasFinder
AAAGCGGGAATCCAGCCCCCAACGCAACAGGAATCCATCGGAAAAAACAGAAACCCCCAAACCGTCATTCCCGCAAAAGCGGGAATCCAGCCCCCTAACGCAACAGGAATCCATCG

>CP031328|12|10|1616099-1616214|CRISPRCasFinder
AAAGCGGGAATCCAGCCCCCAACGCAACAGGAATCCATCG	GAAAAAACAGAAACCCCCAAACCGTCATTCCCGCAA
AAGCGGGAATCCAGCCCCCTAACGCAACAGGAATCCATCG

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Crispr_ID: CP031328_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_13

2189203-2189301

Orphan

I-E

Consensus_repeat	Method
GCCGTCATTCCCGCGCAGGCAGAAATCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031328_13

>merge|CP031328|13|2189203-2189301|CRISPRCasFinder
GCCGTCATTCCCGCGCAGGCAGAAATCCAACTTGTCCGGTTCCGGTTGTTTTTCGTCTCGTAACTTTTGAGCCGTCATTCCCGCGCAGGCAGAAATCCA

>CP031328|13|11|2189203-2189301|CRISPRCasFinder
GCCGTCATTCCCGCGCAGGCAGAAATCCA	ACTTGTCCGGTTCCGGTTGTTTTTCGTCTCGTAACTTTTGA
GCCGTCATTCCCGCGCAGGCAGAAATCCA

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Crispr_ID: CP031328_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031328_14

2214010-2215509

Orphan

Consensus_repeat	Method
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	PILER-CR
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CRT

22 spacers

The CRISPR arrays of CP031328_14

>merge|CP031328|14|2214010-2215509|PILER-CR,CRISPRCasFinder,CRT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACAGCGAGAAAAAACTTTTGCTGTCGCTGCTGATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCGTATTTGTCCGTCAGTTCGTCTTTGTCGTATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTTACGAAGATGCGTTGAATTCAGGCATAAAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCCATATGATAGATTGTATCATTACCATGGTATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACATTTTAATTACTCCGTTTCAGGTTAAGGGAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACAGAACCCCTAACCATCGACCTGCAACAACAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACGTCAGCACGAGCGTCAATACGACTACGCACATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCTCACAAGCCGCCCGTTCCTTACCTTTCAGATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACAAGTTGATTACATTTACGGTGCAGACGGTTATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACAAAAAGTGCTTGTGATACATCATTTAATGAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTCCCGCCTCATCCGCATCCAAACGCACAGAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCTCTTGAACGCTGACGAAATATTCCGATTTATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTGCAGCTTTCTGCGTCGGCGGCAAAATCCAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACGCTGGGATGATTGACAATCCGGAACTAGGCATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCATTTCGCCAGTGAAATTGTTGTCAAAAGAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACACACACGCTCAACGTTGTTGTAATCTGACCATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTCTCGGCGGCGTGCTAGGCGGCGTGCTAGGCGGCGTGTGGGCATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTGTGCATCTCGTTTCTTACCAGTCTTCCAGATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTACCTCTTCATAAATATGCTCATCATGATAATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACCCCTGTCGGCTGCGTCGATGGCGGCAAAAGATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACAGTGTGAACTATGTTAGATGCGTTGAGTTTATTGTAGCACTGCGAAATGAGAATGGGAGCTACAACTTGAGTTTTCATATTTTAGAACCGCCGTCCATTGTAGCACTGCGAAATGAGAATGGGCGCTACAAC

>CP031328|14|3|2214010-2215509|PILER-CR
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGCGAGAAAAAACTTTTGCTGTCGCTGCTG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CGTATTTGTCCGTCAGTTCGTCTTTGTCGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTACGAAGATGCGTTGAATTCAGGCATAAA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCATATGATAGATTGTATCATTACCATGGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ATTTTAATTACTCCGTTTCAGGTTAAGGGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGAACCCCTAACCATCGACCTGCAACAACA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GTCAGCACGAGCGTCAATACGACTACGCAC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCACAAGCCGCCCGTTCCTTACCTTTCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAGTTGATTACATTTACGGTGCAGACGGTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAAAAGTGCTTGTGATACATCATTTAATGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCCCGCCTCATCCGCATCCAAACGCACAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCTTGAACGCTGACGAAATATTCCGATTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGCAGCTTTCTGCGTCGGCGGCAAAATCCA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GCTGGGATGATTGACAATCCGGAACTAGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CATTTCGCCAGTGAAATTGTTGTCAAAAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ACACACGCTCAACGTTGTTGTAATCTGACC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCTCGGCGGCGTGCTAGGCGGCGTGCTAGGCGGCGTGTGGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGTGCATCTCGTTTCTTACCAGTCTTCCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TACCTCTTCATAAATATGCTCATCATGATA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCCTGTCGGCTGCGTCGATGGCGGCAAAAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGTGTGAACTATGTTAGATGCGTTGAGTTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTGAGTTTTCATATTTTAGAACCGCCGTCC
ATTGTAGCACTGCGAAATGAGAATGGGCGCTACAAC

>CP031328|14|12|2214010-2215509|CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGCGAGAAAAAACTTTTGCTGTCGCTGCTG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CGTATTTGTCCGTCAGTTCGTCTTTGTCGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTACGAAGATGCGTTGAATTCAGGCATAAA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCATATGATAGATTGTATCATTACCATGGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ATTTTAATTACTCCGTTTCAGGTTAAGGGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGAACCCCTAACCATCGACCTGCAACAACA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GTCAGCACGAGCGTCAATACGACTACGCAC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCACAAGCCGCCCGTTCCTTACCTTTCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAGTTGATTACATTTACGGTGCAGACGGTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAAAAGTGCTTGTGATACATCATTTAATGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCCCGCCTCATCCGCATCCAAACGCACAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCTTGAACGCTGACGAAATATTCCGATTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGCAGCTTTCTGCGTCGGCGGCAAAATCCA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GCTGGGATGATTGACAATCCGGAACTAGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CATTTCGCCAGTGAAATTGTTGTCAAAAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ACACACGCTCAACGTTGTTGTAATCTGACC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCTCGGCGGCGTGCTAGGCGGCGTGCTAGGCGGCGTGTGGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGTGCATCTCGTTTCTTACCAGTCTTCCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TACCTCTTCATAAATATGCTCATCATGATA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCCTGTCGGCTGCGTCGATGGCGGCAAAAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGTGTGAACTATGTTAGATGCGTTGAGTTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTGAGTTTTCATATTTTAGAACCGCCGTCC
ATTGTAGCACTGCGAAATGAGAATGGGCGCTACAAC

>CP031328|14|1|2214010-2215509|CRT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGCGAGAAAAAACTTTTGCTGTCGCTGCTG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CGTATTTGTCCGTCAGTTCGTCTTTGTCGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTACGAAGATGCGTTGAATTCAGGCATAAA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCATATGATAGATTGTATCATTACCATGGT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ATTTTAATTACTCCGTTTCAGGTTAAGGGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGAACCCCTAACCATCGACCTGCAACAACA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GTCAGCACGAGCGTCAATACGACTACGCAC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCACAAGCCGCCCGTTCCTTACCTTTCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAGTTGATTACATTTACGGTGCAGACGGTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AAAAAGTGCTTGTGATACATCATTTAATGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCCCGCCTCATCCGCATCCAAACGCACAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CTCTTGAACGCTGACGAAATATTCCGATTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGCAGCTTTCTGCGTCGGCGGCAAAATCCA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	GCTGGGATGATTGACAATCCGGAACTAGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CATTTCGCCAGTGAAATTGTTGTCAAAAGA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	ACACACGCTCAACGTTGTTGTAATCTGACC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TCTCGGCGGCGTGCTAGGCGGCGTGCTAGGCGGCGTGTGGGC
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TGTGCATCTCGTTTCTTACCAGTCTTCCAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TACCTCTTCATAAATATGCTCATCATGATA
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	CCCTGTCGGCTGCGTCGATGGCGGCAAAAG
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	AGTGTGAACTATGTTAGATGCGTTGAGTTT
ATTGTAGCACTGCGAAATGAGAATGGGAGCTACAAC	TTGAGTTTTCATATTTTAGAACCGCCGTCC
ATTGTAGCACTGCGAAATGAGAATGGGCGCTACAAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	872555-872614	0	1.0
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	872782-872841	0	1.0
CP031328_5	5.1\|353287\|41\|CP031328\|CRISPRCasFinder	353287-353327	41	CP031328.1	356404-356444	0	1.0
CP031328_5	5.1\|353287\|41\|CP031328\|CRISPRCasFinder	353287-353327	41	CP031328.1	1030167-1030207	0	1.0
CP031328_7	7.1\|380582\|47\|CP031328\|CRISPRCasFinder	380582-380628	47	CP031328.1	538342-538388	0	1.0
CP031328_14	14.1\|2214046\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214046-2214075	30	CP031328.1	1122981-1123010	0	1.0
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	872244-872303	1	0.983
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	873233-873292	1	0.983
CP031328_5	5.1\|353287\|41\|CP031328\|CRISPRCasFinder	353287-353327	41	CP031328.1	140371-140411	1	0.976
CP031328_9	9.1\|667327\|27\|CP031328\|CRISPRCasFinder	667327-667353	27	CP031328.1	1057619-1057645	1	0.963
CP031328_9	9.1\|667327\|27\|CP031328\|CRISPRCasFinder	667327-667353	27	CP031328.1	2014358-2014384	1	0.963
CP031328_9	9.1\|667327\|27\|CP031328\|CRISPRCasFinder	667327-667353	27	CP031328.1	2014711-2014737	1	0.963
CP031328_14	14.12\|2214772\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214772-2214801	30	CP031328.1	746648-746677	1	0.967
CP031328_2	2.1\|223045\|29\|CP031328\|CRISPRCasFinder	223045-223073	29	CP031328.1	1241966-1241994	2	0.931
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	1112693-1112752	2	0.967
CP031328_3	3.1\|226964\|60\|CP031328\|PILER-CR	226964-227023	60	CP031328.1	1902555-1902614	2	0.967
CP031328_10	10.1\|871441\|54\|CP031328\|CRISPRCasFinder	871441-871494	54	CP031328.1	872559-872612	2	0.963
CP031328_10	10.1\|871441\|54\|CP031328\|CRISPRCasFinder	871441-871494	54	CP031328.1	872786-872839	2	0.963
CP031328_14	14.13\|2214838\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214838-2214867	30	CP031328.1	744513-744542	2	0.933
CP031328_14	14.15\|2214970\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214970-2214999	30	CP031328.1	705001-705030	2	0.933
CP031328_3	3.2\|227050\|64\|CP031328\|PILER-CR	227050-227113	64	CP031328.1	227632-227695	4	0.938
CP031328_3	3.2\|227050\|64\|CP031328\|PILER-CR	227050-227113	64	CP031328.1	871926-871989	6	0.906
CP031328_3	3.2\|227050\|64\|CP031328\|PILER-CR	227050-227113	64	CP031328.1	1112623-1112686	6	0.906

1. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 872555-872614, mismatch: 0, identity: 1.0

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	Protospacer
************************************************************

2. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 872782-872841, mismatch: 0, identity: 1.0

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	Protospacer
************************************************************

3. spacer 5.1|353287|41|CP031328|CRISPRCasFinder matches to position: 356404-356444, mismatch: 0, identity: 1.0

aaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
aaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
*****************************************

4. spacer 5.1|353287|41|CP031328|CRISPRCasFinder matches to position: 1030167-1030207, mismatch: 0, identity: 1.0

aaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
aaagtttcaaaatttattctaaataactgaaactcaacgaa	Protospacer
*****************************************

5. spacer 7.1|380582|47|CP031328|CRISPRCasFinder matches to position: 538342-538388, mismatch: 0, identity: 1.0

ggcttgttcggtttcggttttttttgaggtttcgggcaacttctaaa	CRISPR spacer
ggcttgttcggtttcggttttttttgaggtttcgggcaacttctaaa	Protospacer
***********************************************

6. spacer 14.1|2214046|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to position: 1122981-1123010, mismatch: 0, identity: 1.0

agcgagaaaaaacttttgctgtcgctgctg	CRISPR spacer
agcgagaaaaaacttttgctgtcgctgctg	Protospacer
******************************

7. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 872244-872303, mismatch: 1, identity: 0.983

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caagacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	Protospacer
**.*********************************************************

8. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 873233-873292, mismatch: 1, identity: 0.983

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caagacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	Protospacer
**.*********************************************************

9. spacer 5.1|353287|41|CP031328|CRISPRCasFinder matches to position: 140371-140411, mismatch: 1, identity: 0.976

aaagtttcaaaatttattctaaataactgaaactcaacgaa	CRISPR spacer
aaagtttcaaaatttattctaagtaactgaaactcaacgaa	Protospacer
**********************.******************

10. spacer 9.1|667327|27|CP031328|CRISPRCasFinder matches to position: 1057619-1057645, mismatch: 1, identity: 0.963

gaacacgtccgtagtgaaacctatatc	CRISPR spacer
gaacacgtccgtagggaaacctatatc	Protospacer
************** ************

11. spacer 9.1|667327|27|CP031328|CRISPRCasFinder matches to position: 2014358-2014384, mismatch: 1, identity: 0.963

gaacacgtccgtagtgaaacctatatc	CRISPR spacer
gaacacgtccgtagggaaacctatatc	Protospacer
************** ************

12. spacer 9.1|667327|27|CP031328|CRISPRCasFinder matches to position: 2014711-2014737, mismatch: 1, identity: 0.963

gaacacgtccgtagtgaaacctatatc	CRISPR spacer
gaacacgtccgtagggaaacctatatc	Protospacer
************** ************

13. spacer 14.12|2214772|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to position: 746648-746677, mismatch: 1, identity: 0.967

ctcttgaacgctgacgaaatattccgattt	CRISPR spacer
ctcttggacgctgacgaaatattccgattt	Protospacer
******.***********************

14. spacer 2.1|223045|29|CP031328|CRISPRCasFinder matches to position: 1241966-1241994, mismatch: 2, identity: 0.931

tagaacgcggggttaagaaaacctgcatc	CRISPR spacer
taggacgcagggttaagaaaacctgcatc	Protospacer
***.****.********************

15. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 1112693-1112752, mismatch: 2, identity: 0.967

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caggacgcaaaatctcaagaaaccgttttacctgataagtttccgcactgacagacctag	Protospacer
********************************.***************.***********

16. spacer 3.1|226964|60|CP031328|PILER-CR matches to position: 1902555-1902614, mismatch: 2, identity: 0.967

caggacgcaaaatctcaagaaaccgttttacccgataagtttccgcaccgacagacctag	CRISPR spacer
caggacgcaaaatctcaagaaaccgttttacctgataagtttccgcactgacagacctag	Protospacer
********************************.***************.***********

17. spacer 10.1|871441|54|CP031328|CRISPRCasFinder matches to position: 872559-872612, mismatch: 2, identity: 0.963

gtctgtcggtgcggaaacttatcggataaaacggtttcttgagattttgcatcc	CRISPR spacer
gtctgtcggtgcggaaacttatcgggtaaaacggtttcttgagattttgcgtcc	Protospacer
*************************.************************.***

18. spacer 10.1|871441|54|CP031328|CRISPRCasFinder matches to position: 872786-872839, mismatch: 2, identity: 0.963

gtctgtcggtgcggaaacttatcggataaaacggtttcttgagattttgcatcc	CRISPR spacer
gtctgtcggtgcggaaacttatcgggtaaaacggtttcttgagattttgcgtcc	Protospacer
*************************.************************.***

19. spacer 14.13|2214838|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to position: 744513-744542, mismatch: 2, identity: 0.933

tgcagctttctgcgtcggcggcaaaatcca	CRISPR spacer
tgcagctttccgcgtcggcggcaaactcca	Protospacer
**********.************** ****

20. spacer 14.15|2214970|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to position: 705001-705030, mismatch: 2, identity: 0.933

catttcgccagtgaaattgttgtcaaaaga	CRISPR spacer
catttcgcctgtgaaattgtcgtcaaaaga	Protospacer
********* **********.*********

21. spacer 3.2|227050|64|CP031328|PILER-CR matches to position: 227632-227695, mismatch: 4, identity: 0.938

gcctgcgcgggaatgacgggatttgaggttgcggcatttatcgggagcaacagaatccgc	CRISPR spacer
gcctgcgcgggaatgacgggatttgaggttgcggcatttatcgggagcaacagaatccgc	Protospacer
************************************************************

22. spacer 3.2|227050|64|CP031328|PILER-CR matches to position: 871926-871989, mismatch: 6, identity: 0.906

gcctgcgcgggaatgacgggatttgaggttgcggcatttatcgggagcaacagaatccgc	CRISPR spacer
gcctgcgcgggaatgacgggatttgagattgcggcatttatcgggagcaacagaagccgc	Protospacer
***************************.*************************** ****

23. spacer 3.2|227050|64|CP031328|PILER-CR matches to position: 1112623-1112686, mismatch: 6, identity: 0.906

gcctgcgcgggaatgacgggatttgaggttgcggcatttatcgggagcaacagaatccgc	CRISPR spacer
gcctgcgcgggaatgacgggatttgagattgcggcatttatcgggagcaacagaagccgc	Protospacer
***************************.*************************** ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	383290-383319	4	0.867
CP031328_14	14.8\|2214508\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214508-2214537	30	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	342366-342395	7	0.767
CP031328_14	14.9\|2214574\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214574-2214603	30	MN584918	Vibrio phage phi50-12, complete genome	9015-9044	7	0.767
CP031328_14	14.11\|2214706\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214706-2214735	30	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	354582-354611	7	0.767
CP031328_14	14.11\|2214706\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214706-2214735	30	NC_009760	Bacillus phage 0305phi8-36, complete genome	184868-184897	7	0.767
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	NC_020879	Aeromonas phage Aes012, complete genome	18804-18833	7	0.767
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	JN377900	Aeromonas phage Aes144 DNA polymerase subunits, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds	4122-4151	7	0.767
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	MF479730	Aeromonas phage AS-gz, complete genome	98786-98815	7	0.767
CP031328_14	14.19\|2215246\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215246-2215275	30	NC_019487	Bacillus phage SP10, complete genome	100443-100472	7	0.767
CP031328_14	14.19\|2215246\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215246-2215275	30	AB605730	Bacillus phage SP10 DNA, complete sequence	100443-100472	7	0.767
CP031328_14	14.19\|2215246\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215246-2215275	30	LT960610	Bacillus phage SBSphiC genome assembly, complete genome: monopartite	93457-93486	7	0.767
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	269294-269323	7	0.767
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	531080-531109	7	0.767
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	332039-332068	7	0.767
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	531213-531242	7	0.767
CP031328_14	14.2\|2214112\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214112-2214141	30	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	71465-71494	8	0.733
CP031328_14	14.2\|2214112\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214112-2214141	30	JQ680350	Unidentified phage clone 1013_scaffold47 genomic sequence	21013-21042	8	0.733
CP031328_14	14.8\|2214508\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214508-2214537	30	NZ_AP014688	Bradyrhizobium diazoefficiens strain NK6 plasmid pNK6d, complete sequence	59881-59910	8	0.733
CP031328_14	14.8\|2214508\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214508-2214537	30	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1893134-1893163	8	0.733
CP031328_14	14.10\|2214640\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214640-2214669	30	CP024687	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence	91148-91177	8	0.733
CP031328_14	14.11\|2214706\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214706-2214735	30	NC_013973	Erwinia amylovora ATCC 49946 plasmid 2, complete sequence	57040-57069	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	LC371242	Escherichia phage EcS1 DNA, complete sequence	26633-26662	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	MH179477	Aeromonas phage 60AhydR15PP, complete genome	85755-85784	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	NC_008208	Aeromonas phage 25, complete genome	19673-19702	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	AY303350	Aeromonas phage 25 gp46 recombination endonuclease subunit (46) gene, partial cds; conserved hypothetical protein (45.2), RNA polymerase binding protein (rpbA), sliding clamp (45), clamp loader subunit (44), clamp loader subunit (62), RegA (regA), core DNA polymerase of replisome (43A), GIY-YIG endonuclease (helc25), and core DNA polymerase of replisome (43B) genes, complete cds; and hypothetical protein (43.-1) gene, partial cds	6853-6882	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	DQ529280	Aeromonas salmonicida bacteriophage 25, complete genome	19673-19702	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	JN377896	Aeromonas phage Aes002 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds	3409-3438	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	JN377898	Aeromonas phage Aes120 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, initiator of head vertex, and putative HNH homing endonuclease genes, complete cds	3418-3447	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	KP007359	Enterobacteria phage vB_EcoM_VR5, complete genome	28255-28284	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	JN377901	Aeromonas phage Aes151 DNA polymerase subunits, dCMP hydroxymethylase, initiator of head vertex, and putative HNH homing endonuclease genes, complete cds	2604-2633	8	0.733
CP031328_14	14.18\|2215180\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215180-2215209	30	MH179476	Aeromonas phage 50AhydR13PP, complete genome	45758-45787	8	0.733
CP031328_14	14.19\|2215246\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215246-2215275	30	MN044033	Klebsiella phage Marfa, complete genome	105108-105137	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	117782-117811	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP013856	Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence	114106-114135	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	507403-507432	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1875444-1875473	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	699902-699931	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	478670-478699	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	518238-518267	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	727314-727343	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP019318	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-6, complete sequence	25593-25622	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1838636-1838665	8	0.733
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	2542-2571	8	0.733
CP031328_14	14.22\|2215444\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215444-2215473	30	NZ_CP031709	Acinetobacter wuhouensis strain WCHA60 plasmid p1_010060, complete sequence	6094-6123	8	0.733
CP031328_14	14.22\|2215444\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215444-2215473	30	NZ_CP015617	Acinetobacter schindleri strain ACE plasmid p2AsACE, complete sequence	2623-2652	8	0.733
CP031328_14	14.7\|2214442\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214442-2214471	30	NZ_CP021360	Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence	18329-18358	9	0.7
CP031328_14	14.7\|2214442\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214442-2214471	30	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	59820-59849	9	0.7
CP031328_14	14.7\|2214442\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214442-2214471	30	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	45870-45899	9	0.7
CP031328_14	14.19\|2215246\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215246-2215275	30	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	105905-105934	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	344141-344170	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	265345-265374	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	517584-517613	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP034149	Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence	317429-317458	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	289164-289193	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	176873-176902	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP030828	Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence	233390-233419	9	0.7
CP031328_14	14.20\|2215312\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2215312-2215341	30	NZ_CP025550	Mycobacterium paragordonae strain 49061 plasmid unnamed4, complete sequence	15027-15056	9	0.7
CP031328_14	14.4\|2214244\|30\|CP031328\|PILER-CR,CRISPRCasFinder,CRT	2214244-2214273	30	MN047793	Xanthomonas phage Xoo-sp13, complete genome	217354-217383	10	0.667

1. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 4, identity: 0.867

-ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gacctg-cggcagcgtcgatgacggcaaaag	Protospacer
  **** **** *********.*********

2. spacer 14.8|2214508|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.767

ctcacaagccgcccgttccttacctttcag	CRISPR spacer
caggccggcagcccgttccttaccttgcag	Protospacer
*  .* .** **************** ***

3. spacer 14.9|2214574|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MN584918 (Vibrio phage phi50-12, complete genome) position: , mismatch: 7, identity: 0.767

aagttgattacatttacggtgcagacggtt	CRISPR spacer
cagttgattacattgaaggtgcagacccaa	Protospacer
 ************* * *********

4. spacer 14.11|2214706|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.767

tcccgcctcatccgcatccaaacgcacaga	CRISPR spacer
cgccgcctcatcggcatcgaaacgcagatg	Protospacer
. ********** ***** ******* * .

5. spacer 14.11|2214706|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_009760 (Bacillus phage 0305phi8-36, complete genome) position: , mismatch: 7, identity: 0.767

tcccgcctcatccgcatccaaacgcacaga	CRISPR spacer
tcgatgctcaaccggatccaaacgcacagc	Protospacer
**    **** *** **************

6. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_020879 (Aeromonas phage Aes012, complete genome) position: , mismatch: 7, identity: 0.767

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcgtttcttaccagtccagaac	Protospacer
 ****** ****************.   *

7. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to JN377900 (Aeromonas phage Aes144 DNA polymerase subunits, putative VSR endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds) position: , mismatch: 7, identity: 0.767

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcgtttcttaccagtccagaac	Protospacer
 ****** ****************.   *

8. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MF479730 (Aeromonas phage AS-gz, complete genome) position: , mismatch: 7, identity: 0.767

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcgtttcttaccagtccagaac	Protospacer
 ****** ****************.   *

9. spacer 14.19|2215246|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_019487 (Bacillus phage SP10, complete genome) position: , mismatch: 7, identity: 0.767

tacctcttcataaatatgctcatcatgata	CRISPR spacer
aacctcttcataaatatcctcaggaagagg	Protospacer
 **************** ****  * ** .

10. spacer 14.19|2215246|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to AB605730 (Bacillus phage SP10 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tacctcttcataaatatgctcatcatgata	CRISPR spacer
aacctcttcataaatatcctcaggaagagg	Protospacer
 **************** ****  * ** .

11. spacer 14.19|2215246|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to LT960610 (Bacillus phage SBSphiC genome assembly, complete genome: monopartite) position: , mismatch: 7, identity: 0.767

tacctcttcataaatatgctcatcatgata	CRISPR spacer
aacctcttcataaatatcctcaggaagagg	Protospacer
 **************** ****  * ** .

12. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.767

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gcttctcggctgcgtcgatggcgataaagc	Protospacer
 *.* ******************..***.

13. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 7, identity: 0.767

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gcttctcggctgcgtcgatggcgataaagc	Protospacer
 *.* ******************..***.

14. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 7, identity: 0.767

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
cttcgtcggcagcgacgatggcggcaatac	Protospacer
*...****** *** ************ *

15. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 7, identity: 0.767

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gcttctcggctgcgtcgatggcgataaagc	Protospacer
 *.* ******************..***.

16. spacer 14.2|2214112|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 8, identity: 0.733

cgtatttgtccgtcagttcgtctttgtcgt	CRISPR spacer
gctccgtgtccgtcagttcttctttgccgc	Protospacer
  * . ************* ******.**.

17. spacer 14.2|2214112|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to JQ680350 (Unidentified phage clone 1013_scaffold47 genomic sequence) position: , mismatch: 8, identity: 0.733

cgtatttgtccgtcagttcgtctttgtcgt	CRISPR spacer
attctttttctgtcagttcgtctttgttta	Protospacer
  * *** **.****************.

18. spacer 14.8|2214508|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014688 (Bradyrhizobium diazoefficiens strain NK6 plasmid pNK6d, complete sequence) position: , mismatch: 8, identity: 0.733

ctcacaagccgcccgttccttacctttcag	CRISPR spacer
ggtcccggccgccggttcctgacctttcag	Protospacer
  . * .****** ****** *********

19. spacer 14.8|2214508|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ctcacaagccgcccgttccttacctttcag	CRISPR spacer
cacacaagccgcccgttgctgacctggaga	Protospacer
* *************** ** ****   ..

20. spacer 14.10|2214640|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaagtgcttgtgatacatcatttaatga	CRISPR spacer
ttctaatgcttctaatacatcatttaatgt	Protospacer
    *.***** *.***************

21. spacer 14.11|2214706|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_013973 (Erwinia amylovora ATCC 49946 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.733

tcccgcctcatccgcatccaaacgcacaga	CRISPR spacer
ccccgcctcatgcgcatccatacgtatcag	Protospacer
.********** ******** ***.*. ..

22. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to LC371242 (Escherichia phage EcS1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcgtttcttagcagtccagaaa	Protospacer
 ****** ********** *****.   *.

23. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MH179477 (Aeromonas phage 60AhydR15PP, complete genome) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccagaac	Protospacer
 ****** ** *************.   *

24. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NC_008208 (Aeromonas phage 25, complete genome) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccaaaac	Protospacer
 ****** ** *************.   *

25. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to AY303350 (Aeromonas phage 25 gp46 recombination endonuclease subunit (46) gene, partial cds; conserved hypothetical protein (45.2), RNA polymerase binding protein (rpbA), sliding clamp (45), clamp loader subunit (44), clamp loader subunit (62), RegA (regA), core DNA polymerase of replisome (43A), GIY-YIG endonuclease (helc25), and core DNA polymerase of replisome (43B) genes, complete cds; and hypothetical protein (43.-1) gene, partial cds) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccaaaac	Protospacer
 ****** ** *************.   *

26. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to DQ529280 (Aeromonas salmonicida bacteriophage 25, complete genome) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccaaaac	Protospacer
 ****** ** *************.   *

27. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to JN377896 (Aeromonas phage Aes002 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, and initiator of head vertex genes, complete cds) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccagaac	Protospacer
 ****** ** *************.   *

28. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to JN377898 (Aeromonas phage Aes120 DNA polymerase subunit, putative GIY-YIG homing endonuclease, DNA polymerase subunit, dCMP hydroxymethylase, initiator of head vertex, and putative HNH homing endonuclease genes, complete cds) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccagaac	Protospacer
 ****** ** *************.   *

29. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to KP007359 (Enterobacteria phage vB_EcoM_VR5, complete genome) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcataacgtttcttaccagtccagaat	Protospacer
 ******  ***************.   *

30. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to JN377901 (Aeromonas phage Aes151 DNA polymerase subunits, dCMP hydroxymethylase, initiator of head vertex, and putative HNH homing endonuclease genes, complete cds) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccagaac	Protospacer
 ****** ** *************.   *

31. spacer 14.18|2215180|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MH179476 (Aeromonas phage 50AhydR13PP, complete genome) position: , mismatch: 8, identity: 0.733

tgtgcatctcgtttcttaccagtcttccag	CRISPR spacer
agtgcatatcttttcttaccagtccagaac	Protospacer
 ****** ** *************.   *

32. spacer 14.19|2215246|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MN044033 (Klebsiella phage Marfa, complete genome) position: , mismatch: 8, identity: 0.733

tacctcttcataaatatgctcatcatgata	CRISPR spacer
aatagcttcagaaataagctcatcatgact	Protospacer
 *.  ***** ***** ***********.

33. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gtgccacggccgcgtcgatggcggcgaaag	Protospacer
 . .  ****.**************.****

34. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013856 (Pseudonocardia sp. HH130630-07 plasmid pLS2-2, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gccagtcggcggcgtcgatggcggtctcgg	Protospacer
 ** ****** *************.   .*

35. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
ccctgtcggcagcgccgatggcgctctgat	Protospacer
********** ***.******** .  .*

36. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
ccctgtcggctccggcgatggcgccggccc	Protospacer
*********** ** ******** *..

37. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
ggctgtcggctacggcgatggcggcggcgg	Protospacer
  *********.** **********.. .*

38. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tcctgtcggcggcgtcgctggcggaattcc	Protospacer
.********* ****** ****** *

39. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tcctgtcggctgcggcgctggcggaattcc	Protospacer
.************* ** ****** *

40. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
agctgtcggctgcggcgatgacggcctgcg	Protospacer
  ************ *****.****  . *

41. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019318 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-6, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
cggcctcggccgcgtcgatggcggcacagc	Protospacer
*  . *****.*************** *.

42. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tgctggcggcggcgtcgatggcggcgaggt	Protospacer
. *** **** **************.*..

43. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 8, identity: 0.733

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
gccagtcggcggcgtcgatggcggtctcgg	Protospacer
 ** ****** *************.   .*

44. spacer 14.22|2215444|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031709 (Acinetobacter wuhouensis strain WCHA60 plasmid p1_010060, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttttcatattttagaaccgccgtcc	CRISPR spacer
ttgagttttcatatttaagtacctgtttta	Protospacer
**************** ** ***  . *.

45. spacer 14.22|2215444|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015617 (Acinetobacter schindleri strain ACE plasmid p2AsACE, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttttcatattttagaaccgccgtcc	CRISPR spacer
ttgagttttcatatttaagtacctgtttta	Protospacer
**************** ** ***  . *.

46. spacer 14.7|2214442|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021360 (Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence) position: , mismatch: 9, identity: 0.7

gtcagcacgagcgtcaatacgactacgcac	CRISPR spacer
acggtgacgagcgtgaatacgacgacgcag	Protospacer
.. .  ******** ******** *****

47. spacer 14.7|2214442|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.7

gtcagcacgagcgtcaatacgactacgcac	CRISPR spacer
acggtgacgagcgtgaatacgacgacgcag	Protospacer
.. .  ******** ******** *****

48. spacer 14.7|2214442|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.7

gtcagcacgagcgtcaatacgactacgcac	CRISPR spacer
acggtgacgagcgtgaatacgacgacgcag	Protospacer
.. .  ******** ******** *****

49. spacer 14.19|2215246|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 9, identity: 0.7

tacctcttcataaatatgctcatcatgata	CRISPR spacer
cgcctcttctttaatatgctcatcaattct	Protospacer
..******* * *************   .

50. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

51. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

52. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

53. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

54. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

55. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
tctggtcggcagcgtcgatggcggctggcc	Protospacer
.*. ****** ************** ..

56. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
ccctgtcggatgcggcgatggcgaagcgga	Protospacer
********* **** ********. . ...

57. spacer 14.20|2215312|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025550 (Mycobacterium paragordonae strain 49061 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.7

ccctgtcggctgcgtcgatggcggcaaaag	CRISPR spacer
cgaggtcggcggcgtcgatggcggcgtcga	Protospacer
*   ****** **************.  ..

58. spacer 14.4|2214244|30|CP031328|PILER-CR,CRISPRCasFinder,CRT matches to MN047793 (Xanthomonas phage Xoo-sp13, complete genome) position: , mismatch: 10, identity: 0.667

ccatatgatagattgtatcattaccatggt	CRISPR spacer
atcggagatagattgtttcattaccattta	Protospacer
 .  . ********** **********

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031328

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection