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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP026131 Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence 0 crisprs RT 0 0 4 0
CP026130 Klebsiella pneumoniae strain F1 chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0

Results visualization

1. CP026131
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5197 : 19003 18 Enterobacteria_phage(18.18%) transposase NA
DBSCAN-SWA_2 48770 : 57953 10 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_3 73092 : 85483 10 Escherichia_phage(62.5%) transposase NA
DBSCAN-SWA_4 137135 : 151763 14 Escherichia_phage(44.44%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP026130
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP026130_1 4574001-4574095 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 451072 : 520450 75 uncultured_Caudovirales_phage(61.11%) integrase,terminase,tRNA,tail,protease,capsid,head,portal attL 468680:468697|attR 484675:484692
DBSCAN-SWA_2 1226321 : 1275465 63 Salmonella_phage(80.0%) coat,integrase,tail,tRNA,transposase,capsid,head,portal,plate attL 1225979:1225995|attR 1252938:1252954
DBSCAN-SWA_3 1380181 : 1432924 63 Salmonella_phage(40.38%) terminase,tail,transposase,holin NA
DBSCAN-SWA_4 1763121 : 1770027 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_5 1810762 : 1826508 15 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_6 2792159 : 2803046 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 2996311 : 3132987 156 uncultured_Caudovirales_phage(21.18%) integrase,terminase,tail,transposase,lysis,protease,holin,head,plate attL 3020684:3020701|attR 3141427:3141444
DBSCAN-SWA_8 3260659 : 3348538 96 Klebsiella_phage(45.45%) integrase,terminase,tail,tRNA,capsid,holin,head,portal attL 3287462:3287476|attR 3346349:3346363
DBSCAN-SWA_9 3564881 : 3657832 96 Salmonella_phage(56.9%) integrase,tail,tRNA,protease,capsid,head,portal,plate attL 3620407:3620425|attR 3657907:3657925
DBSCAN-SWA_10 4310705 : 4322358 13 Enterobacteria_phage(70.0%) integrase attL 4311155:4311169|attR 4334210:4334224
DBSCAN-SWA_11 4790604 : 4800129 10 Enterobacteria_phage(83.33%) transposase NA
DBSCAN-SWA_12 4986777 : 5024833 38 Salmonella_phage(16.67%) integrase,transposase attL 4976969:4976984|attR 5006188:5006203
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage