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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031477 Haemophilus parainfluenzae strain M27794 chromosome, complete genome 1 crisprs NA 0 16 0 0

Results visualization

1. CP031477
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031477_1 1768006-1769494 Orphan NA
22 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP031477_1 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769033-1769062 30 NC_021724 Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence 2345-2374 0 1.0
CP031477_1 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769033-1769062 30 NC_002579 Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence 25285-25314 0 1.0
CP031477_1 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769033-1769062 30 GQ866235 Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence 1423-1452 0 1.0
CP031477_1 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769033-1769062 30 NZ_KX753679 Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence 3691-3720 0 1.0
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NZ_CP044540 Borrelia sp. CA690 plasmid lp17, complete sequence 13345-13374 4 0.867
CP031477_1 1.4|1768240|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768240-1768269 30 NC_014120 Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence 442949-442978 5 0.833
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 38699-38728 5 0.833
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NZ_CP044456 Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence 152433-152462 5 0.833
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NZ_CP039144 Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence 370106-370135 5 0.833
CP031477_1 1.12|1768768|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768768-1768797 30 NZ_LN614828 Legionella fallonii LLAP-10 plasmid II, complete sequence 15690-15719 5 0.833
CP031477_1 1.12|1768768|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768768-1768797 30 LC081338 Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome 148199-148228 6 0.8
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MK250016 Prevotella phage Lak-A1, complete genome 342286-342315 6 0.8
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MH937506 Streptococcus phage CHPC1148, complete genome 6163-6192 6 0.8
CP031477_1 1.19|1769231|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769231-1769260 30 NZ_CP022300 Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence 14086-14115 6 0.8
CP031477_1 1.1|1768042|30|CP031477|CRISPRCasFinder,CRT 1768042-1768071 30 MN855965 Siphoviridae sp. isolate 340, complete genome 203-232 7 0.767
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NZ_CP015203 Rhodococcus sp. 008 plasmid pR8L1, complete sequence 209340-209369 7 0.767
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NZ_CP044283 Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence 69928-69957 7 0.767
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 NZ_CP017304 Rhodococcus sp. YL-1 plasmid pYLL2 sequence 267175-267204 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 JX194239 Staphylococcus phage SA11, complete genome 111568-111597 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080584 UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome 18898-18927 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080590 UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome 116974-117003 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 KX532239 Staphylococcus phage StAP1, complete genome 24669-24698 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080587 UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome 44918-44947 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 AP019522 Staphylococcal phage MR003 DNA, complete genome 47564-47593 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NC_022090 Staphylococcus phage vB_SauM_Remus, complete genome 12374-12403 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NC_022090 Staphylococcus phage vB_SauM_Remus, complete genome 112605-112634 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080588 UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome 21141-21170 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080595 UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome 5050-5079 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MT080595 UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome 103983-104012 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NC_020877 Staphylococcus phage vB_SauM_Romulus, complete genome 12374-12403 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NC_020877 Staphylococcus phage vB_SauM_Romulus, complete genome 109294-109323 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 KY779848 Staphylococcus phage qdsa001, complete genome 12734-12763 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 MN693323 Marine virus AFVG_25M87, complete genome 33406-33435 7 0.767
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NZ_CP009417 Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence 42744-42773 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP046723 Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence 121208-121237 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP034470 Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence 312614-312643 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP034472 Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence 77358-77387 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP034149 Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence 103545-103574 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP034475 Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence 494134-494163 7 0.767
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 NZ_CP034477 Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence 103675-103704 7 0.767
CP031477_1 1.22|1769429|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769429-1769458 30 MN032614 Aeromonas phage PS1, complete genome 41236-41265 7 0.767
CP031477_1 1.22|1769429|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769429-1769458 30 MN453779 Aeromonas phage PS2, complete genome 41328-41357 7 0.767
CP031477_1 1.2|1768108|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768108-1768137 30 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 292959-292988 8 0.733
CP031477_1 1.3|1768174|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768174-1768203 30 MH363700 Vibrio phage VP-1, complete genome 129645-129674 8 0.733
CP031477_1 1.3|1768174|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768174-1768203 30 NC_048765 Vibrio phage VAP7, complete genome 7638-7667 8 0.733
CP031477_1 1.4|1768240|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768240-1768269 30 NZ_CP035902 Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence 159557-159586 8 0.733
CP031477_1 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768306-1768335 30 MN234219 Mycobacterium phage Mercurio, complete genome 44163-44192 8 0.733
CP031477_1 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768306-1768335 30 KJ410133 Mycobacterium phage Jolie2, complete genome 43595-43624 8 0.733
CP031477_1 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768306-1768335 30 MN234185 Mycobacterium phage Lemuria, complete genome 44284-44313 8 0.733
CP031477_1 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768438-1768467 30 AP022646 Bacillus wiedmannii PL1 plasmid pBwiPL1-3 DNA, complete sequence 34678-34707 8 0.733
CP031477_1 1.13|1768834|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768834-1768863 30 NZ_CP018030 Alteromonas mediterranea strain RG65 plasmid MRG65-300, complete sequence 133348-133377 8 0.733
CP031477_1 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768900-1768929 30 NZ_CP012185 Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence 360227-360256 8 0.733
CP031477_1 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768900-1768929 30 NZ_CP012182 Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence 687182-687211 8 0.733
CP031477_1 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768900-1768929 30 KT997874 Uncultured Mediterranean phage uvDeep-CGR2-KM23-C198, complete genome 3962-3991 8 0.733
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 NZ_CP050417 Acinetobacter baumannii strain PM193665 plasmid pPM193665_2, complete sequence 19318-19347 8 0.733
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 KT588075 Acinetobacter phage Ab105-2phi, complete genome 2267-2296 8 0.733
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 AP013535 Uncultured Mediterranean phage uvMED DNA, complete genome, group G5, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C10 21191-21220 8 0.733
CP031477_1 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769099-1769128 30 HE806280 Acinetobacter bacteriophage AP22, complete genome 2056-2085 8 0.733
CP031477_1 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769165-1769194 30 MK448822 Streptococcus phage Javan629, complete genome 21250-21279 8 0.733
CP031477_1 1.20|1769297|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769297-1769326 30 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 183450-183479 8 0.733
CP031477_1 1.20|1769297|30|CP031477|CRISPRCasFinder,CRT,PILER-CR 1769297-1769326 30 NC_014389 Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence 185627-185656 8 0.733
CP031477_1 1.1|1768042|30|CP031477|CRISPRCasFinder,CRT 1768042-1768071 30 NC_023581 Acinetobacter phage Presley, complete genome 54572-54601 9 0.7
CP031477_1 1.15|1768966|31|CP031477|CRISPRCasFinder,CRT,PILER-CR 1768966-1768996 31 NC_021229 Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919 145019-145049 9 0.71

1. spacer 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_021724 (Aggregatibacter actinomycetemcomitans plasmid pS23A, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcaatttgcgataggcgtagtagatgg	CRISPR spacer
aaatcaatttgcgataggcgtagtagatgg	Protospacer
******************************

2. spacer 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_002579 (Aggregatibacter actinomycetemcomitans plasmid pVT745, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcaatttgcgataggcgtagtagatgg	CRISPR spacer
aaatcaatttgcgataggcgtagtagatgg	Protospacer
******************************

3. spacer 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to GQ866235 (Aggregatibacter actinomycetemcomitans strain D11S-1 plasmid S57, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcaatttgcgataggcgtagtagatgg	CRISPR spacer
aaatcaatttgcgataggcgtagtagatgg	Protospacer
******************************

4. spacer 1.16|1769033|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX753679 (Pasteurella multocida strain RCAD0259 plasmid pRCADGH-2, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcaatttgcgataggcgtagtagatgg	CRISPR spacer
aaatcaatttgcgataggcgtagtagatgg	Protospacer
******************************

5. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044540 (Borrelia sp. CA690 plasmid lp17, complete sequence) position: , mismatch: 4, identity: 0.867

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
ttatcaaaatgatgaaaatgatataaaaaa	Protospacer
*.*****.***.***************** 

6. spacer 1.4|1768240|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_014120 (Paraburkholderia sp. CCGE1002 plasmid pBC201, complete sequence) position: , mismatch: 5, identity: 0.833

acattgcggaagtgttcgcgttggcgtttg	CRISPR spacer
agattgcggaactgttcgcgttggcgtggc	Protospacer
* ********* ***************   

7. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 5, identity: 0.833

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gctcagtgatcttttcttcgagttcttctt	Protospacer
** *   ***************.*******

8. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 5, identity: 0.833

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gcgcgatcatcttttcttcgcgctcttctt	Protospacer
****    ************ *********

9. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 5, identity: 0.833

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gcgcgatcatcttttcttcgcgctcttctt	Protospacer
****    ************ *********

10. spacer 1.12|1768768|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN614828 (Legionella fallonii LLAP-10 plasmid II, complete sequence) position: , mismatch: 5, identity: 0.833

gaaagcgttttccataggttgattcaatga	CRISPR spacer
ggaggcgattcccataggttgattcaatca	Protospacer
*.*.*** **.***************** *

11. spacer 1.12|1768768|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to LC081338 (Vibrio sp. 04Ya108 plasmid pSEA1 DNA, complete genome) position: , mismatch: 6, identity: 0.8

gaaagcgttttccataggttgattcaatga-	CRISPR spacer
taaagcgtgttccatagattgatt-gacgat	Protospacer
 ******* ********.****** .*.** 

12. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 6, identity: 0.8

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
taataaagatgatgaaaatgatatagcatt	Protospacer
* ** ******.*************. * *

13. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MH937506 (Streptococcus phage CHPC1148, complete genome) position: , mismatch: 6, identity: 0.8

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
tattcaaaatggtgaaaatgatacaagagt	Protospacer
*  ****.***************.**.*.*

14. spacer 1.19|1769231|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022300 (Acinetobacter johnsonii strain IC001 plasmid pIC001B, complete sequence) position: , mismatch: 6, identity: 0.8

ccaacattgatacttgcctacaataatttc	CRISPR spacer
ctaacattgatacttgactacaaaaaagtt	Protospacer
*.************** ****** **  *.

15. spacer 1.1|1768042|30|CP031477|CRISPRCasFinder,CRT matches to MN855965 (Siphoviridae sp. isolate 340, complete genome) position: , mismatch: 7, identity: 0.767

gcctaaaatcagatccaaactgtttaaggc	CRISPR spacer
atctaaaattaaatccaaactgtttaataa	Protospacer
..*******.*.*************** . 

16. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 7, identity: 0.767

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gatctcggatcttttcgtcgagctcggcga	Protospacer
*  ************* ********  *  

17. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 7, identity: 0.767

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gatctcggatcttttcgtcgagctcggcga	Protospacer
*  ************* ********  *  

18. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 7, identity: 0.767

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gatctcggatcttttcgtcgagctcggcga	Protospacer
*  ************* ********  *  

19. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

20. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

21. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

22. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

23. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

24. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

25. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

26. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
caaaagagattgtgaaaatgatagaaaaat	Protospacer
. *  .**** ************ ******

27. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

28. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

29. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
caaaagagattgtgaaaatgatagaaaaat	Protospacer
. *  .**** ************ ******

30. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atggaaagatgatgaaaatgttataaaaat	Protospacer
 ..  ******.******** *********

31. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
caaaagagattgtgaaaatgatagaaaaat	Protospacer
. *  .**** ************ ******

32. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
caaaagagattgtgaaaatgatagaaaaat	Protospacer
. *  .**** ************ ******

33. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MN693323 (Marine virus AFVG_25M87, complete genome) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
attttatgatggtgaaaatagtataaaaat	Protospacer
 . *.* ************..*********

34. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
tcatcaagatggtgaaaaagaagccgaaag	Protospacer
****************** ** .. .*** 

35. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
ccatacataacaatatccttttgttgataa	Protospacer
.. * *****.** ************** *

36. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
ccatacataacaatatccttttgttgataa	Protospacer
.. * *****.** ************** *

37. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
cgattcataacaatatccttttgttgataa	Protospacer
.  *.*****.** ************** *

38. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
ccatacataacaatatccttttgttgataa	Protospacer
.. * *****.** ************** *

39. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
ccatacataacaatatccttttgttgataa	Protospacer
.. * *****.** ************** *

40. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttttccataataagatccttttgttgatta	CRISPR spacer
cgattcataacaatatccttttgttgataa	Protospacer
.  *.*****.** ************** *

41. spacer 1.22|1769429|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MN032614 (Aeromonas phage PS1, complete genome) position: , mismatch: 7, identity: 0.767

taaaattccgcatattctttttctacacta	CRISPR spacer
ataaaatcagcatattctttttctacttga	Protospacer
  *** ** ***************** . *

42. spacer 1.22|1769429|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MN453779 (Aeromonas phage PS2, complete genome) position: , mismatch: 7, identity: 0.767

taaaattccgcatattctttttctacacta	CRISPR spacer
ataaaatcagcatattctttttctacttga	Protospacer
  *** ** ***************** . *

43. spacer 1.2|1768108|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

atccgataatgccaactcaaaagcgaaaga	CRISPR spacer
gtgggataatgccaacttaaaagcaaatat	Protospacer
.*  *************.******.** . 

44. spacer 1.3|1768174|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MH363700 (Vibrio phage VP-1, complete genome) position: , mismatch: 8, identity: 0.733

tcaattctgtcgtttctatccgttaacata	CRISPR spacer
tcgattctgtcctttctatccgtttcttct	Protospacer
**.******** ************  . . 

45. spacer 1.3|1768174|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_048765 (Vibrio phage VAP7, complete genome) position: , mismatch: 8, identity: 0.733

tcaattctgtcgtttctatccgttaacata	CRISPR spacer
tcgattctgtcttttctatccgtttcttct	Protospacer
**.******** ************  . . 

46. spacer 1.4|1768240|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.733

acattgcggaagtgttcgcgttggcgtttg	CRISPR spacer
gccacccggaagtgttcgcgccggcgtttc	Protospacer
.*  . **************..******* 

47. spacer 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MN234219 (Mycobacterium phage Mercurio, complete genome) position: , mismatch: 8, identity: 0.733

cagccaatctcaaacgagcaagcggcgcac	CRISPR spacer
gacgttctctcgaacaagcaagcggcgcac	Protospacer
 *  .  ****.***.**************

48. spacer 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to KJ410133 (Mycobacterium phage Jolie2, complete genome) position: , mismatch: 8, identity: 0.733

cagccaatctcaaacgagcaagcggcgcac	CRISPR spacer
gacgttctctcgaacaagcaagcggcgcac	Protospacer
 *  .  ****.***.**************

49. spacer 1.5|1768306|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MN234185 (Mycobacterium phage Lemuria, complete genome) position: , mismatch: 8, identity: 0.733

cagccaatctcaaacgagcaagcggcgcac	CRISPR spacer
gacgtgctctcgaacaagcaagcggcgcac	Protospacer
 *  .. ****.***.**************

50. spacer 1.7|1768438|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to AP022646 (Bacillus wiedmannii PL1 plasmid pBwiPL1-3 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcgctcggatcttttcttcgagctcttctt	CRISPR spacer
gtggcttgatcttttcttcgagctcatcga	Protospacer
*.* .. ****************** **  

51. spacer 1.13|1768834|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018030 (Alteromonas mediterranea strain RG65 plasmid MRG65-300, complete sequence) position: , mismatch: 8, identity: 0.733

ttttaa---cataatcaattgagccaacatgta	CRISPR spacer
---caagttcataatcaattgagccatcattat	Protospacer
   .**   ***************** ***   

52. spacer 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 8, identity: 0.733

agaaccaccgacaaagatcaacacaaaagg	CRISPR spacer
tcgaccaccgacagagatcaacacccactg	Protospacer
  .**********.**********  *  *

53. spacer 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 8, identity: 0.733

agaaccaccgacaaagatcaacacaaaagg	CRISPR spacer
tcgaccaccgacagagatcaacacccactg	Protospacer
  .**********.**********  *  *

54. spacer 1.14|1768900|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to KT997874 (Uncultured Mediterranean phage uvDeep-CGR2-KM23-C198, complete genome) position: , mismatch: 8, identity: 0.733

agaaccaccgacaaagatcaacacaaaagg	CRISPR spacer
gtcatcatcgacacagatcaacacaaaaac	Protospacer
.  *.**.***** **************. 

55. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050417 (Acinetobacter baumannii strain PM193665 plasmid pPM193665_2, complete sequence) position: , mismatch: 8, identity: 0.733

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
aaatccagatggtgaaaatgatttagatca	Protospacer
  *** **************** **.*   

56. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to KT588075 (Acinetobacter phage Ab105-2phi, complete genome) position: , mismatch: 8, identity: 0.733

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
aaatccagatggtgaaaatgatttagatca	Protospacer
  *** **************** **.*   

57. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to AP013535 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G5, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C10) position: , mismatch: 8, identity: 0.733

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
atctttagaaggtgaaaatgctataaaaac	Protospacer
 . *. *** ********** ********.

58. spacer 1.17|1769099|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to HE806280 (Acinetobacter bacteriophage AP22, complete genome) position: , mismatch: 8, identity: 0.733

tcatcaagatggtgaaaatgatataaaaat	CRISPR spacer
aaatccagatggtgaaaatgatttagatca	Protospacer
  *** **************** **.*   

59. spacer 1.18|1769165|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to MK448822 (Streptococcus phage Javan629, complete genome) position: , mismatch: 8, identity: 0.733

ttttccataataagatccttttgttgatta	CRISPR spacer
atacgtttaataagatcattttgtttatta	Protospacer
 * . . ********** ******* ****

60. spacer 1.20|1769297|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 8, identity: 0.733

tggtgcggtgtatttaattgaaccgattga	CRISPR spacer
tcaaccggtgtatttaatggaaccgacagt	Protospacer
* .  ************* *******. * 

61. spacer 1.20|1769297|30|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 8, identity: 0.733

tggtgcggtgtatttaattgaaccgattga	CRISPR spacer
tcaaccggtgtatttaatggaaccgacagt	Protospacer
* .  ************* *******. * 

62. spacer 1.1|1768042|30|CP031477|CRISPRCasFinder,CRT matches to NC_023581 (Acinetobacter phage Presley, complete genome) position: , mismatch: 9, identity: 0.7

gcctaaaatcagatccaaactgtttaaggc	CRISPR spacer
tacctaaatcagatccaatctgtttagcct	Protospacer
  *. ************* *******.  .

63. spacer 1.15|1768966|31|CP031477|CRISPRCasFinder,CRT,PILER-CR matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 9, identity: 0.71

ttacatctcttatggcgttatttatggcatc	CRISPR spacer
ccatgggtcttatggcatcatttatggcatt	Protospacer
..*..  *********.*.***********.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage