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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP034674 Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence 0 crisprs NA 0 0 1 0
CP034673 Vibrio anguillarum strain J360 chromosome 2, complete sequence 1 crisprs RT,csa3,cas5f,cas7f,cas6f 0 0 5 0
CP034672 Vibrio anguillarum strain J360 chromosome 1, complete sequence 0 crisprs DEDDh,DinG,cas3,csx1,RT,csa3,WYL 0 0 16 0

Results visualization

1. CP034672
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3218 : 14993 12 Vibrio_phage(55.56%) tRNA,transposase NA
DBSCAN-SWA_2 183962 : 214715 23 Shigella_phage(50.0%) transposase,plate NA
DBSCAN-SWA_3 478245 : 515770 33 Acinetobacter_phage(28.57%) transposase NA
DBSCAN-SWA_4 864750 : 871374 7 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_5 1282916 : 1307212 22 Leptospira_phage(25.0%) transposase,protease NA
DBSCAN-SWA_6 1373090 : 1383428 9 Leptospira_phage(50.0%) transposase NA
DBSCAN-SWA_7 1479514 : 1501301 17 Leptospira_phage(44.44%) transposase,integrase attL 1473805:1473819|attR 1502815:1502829
DBSCAN-SWA_8 1550051 : 1564479 10 Acinetobacter_phage(40.0%) transposase NA
DBSCAN-SWA_9 1706817 : 1754555 48 Leptospira_phage(64.29%) tRNA,transposase,protease,integrase attL 1707059:1707118|attR 1714609:1716711
DBSCAN-SWA_10 1761575 : 1798416 31 Leptospira_phage(45.45%) tRNA,transposase,integrase attL 1761527:1761586|attR 1772388:1773148
DBSCAN-SWA_11 2110411 : 2117650 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_12 2370227 : 2377298 9 Faustovirus(16.67%) NA NA
DBSCAN-SWA_13 2422662 : 2491544 59 Leptospira_phage(37.5%) transposase NA
DBSCAN-SWA_14 2726471 : 2796846 60 Leptospira_phage(15.38%) tRNA,transposase,integrase attL 2741559:2741574|attR 2793863:2793878
DBSCAN-SWA_15 2920901 : 2991347 60 Burkholderia_phage(14.29%) tRNA,protease,transposase NA
DBSCAN-SWA_16 3120478 : 3194439 65 Leptospira_phage(31.82%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP034673
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP034673_1 1083186-1083269 Unclear NA
1 spacers
cas6f,cas7f,cas5f

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 238773 : 314895 59 Enterobacteria_phage(10.0%) transposase,plate NA
DBSCAN-SWA_2 431122 : 516143 60 Clostridium_phage(11.76%) transposase,protease NA
DBSCAN-SWA_3 552329 : 732080 203 Staphylococcus_prophage(22.41%) transposase,tRNA,integrase,protease attL 552313:552327|attR 568133:568147
DBSCAN-SWA_4 739837 : 795030 49 Leptospira_phage(21.43%) transposase,integrase attL 758380:758439|attR 795782:798159
DBSCAN-SWA_5 1000725 : 1099066 59 uncultured_Caudovirales_phage(22.22%) transposase,tRNA,integrase attL 1069844:1069859|attR 1105040:1105055
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP034674
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5512 : 45448 46 Vibrio_phage(36.36%) tail,integrase attL 4518:4536|attR 50996:51014
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage