CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031688	Haemophilus influenzae strain P636-8296 chromosome, complete genome	1 crisprs	DinG,DEDDh,cas3,WYL,RT	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031688_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031688_1

1124111-1124259

Orphan

Consensus_repeat	Method
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of CP031688_1

>merge|CP031688|1|1124111-1124259|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>CP031688|1|1|1124111-1124259|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAA
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
CP031688.1\|AXP59715.1\|1120247_1122839_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein	unknown	unknown	gnl\|CDD\|234980
CP031688.1\|AXP59713.1\|1118867_1119212_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
CP031688.1\|AXP59722.1\|1130327_1130693_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|129260
CP031688.1\|AXP59718.1\|1124999_1126040_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
CP031688.1\|AXP59712.1\|1118512_1118866_-\|UPF0231-family-protein	unknown	unknown	gnl\|CDD\|225654
CP031688.1\|AXP59716.1\|1122913_1123981_+\|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|131433
CP031688.1\|AXP59717.1\|1124380_1124929_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
CP031688.1\|AXP59723.1\|1130756_1131422_+\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|182387
CP031688.1\|AXP59719.1\|1126198_1126456_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|182777
CP031688.1\|AXP59720.1\|1126535_1128263_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
CP031688.1\|AXP59711.1\|1116160_1118506_-\|penicillin-binding-protein-1B	unknown	unknown	gnl\|CDD\|273952
CP031688.1\|AXP59714.1\|1119347_1120154_+\|methionine-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
CP031688.1\|AXP59707.1\|1111580_1112318_+\|LamB/YcsF-family-protein	unknown	unknown	gnl\|CDD\|212111
CP031688.1\|AXP59726.1\|1135113_1136589_-\|cytosol-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
CP031688.1\|AXP59724.1\|1131418_1132774_+\|two-component-system-sensor-histidine-kinase-QseC	unknown	unknown	gnl\|CDD\|182388
CP031688.1\|AXP59708.1\|1112361_1113555_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|224826
CP031688.1\|AXP59721.1\|1128322_1128823_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
CP031688.1\|AXP59709.1\|1113625_1114960_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
CP031688.1\|AXP59710.1\|1115115_1115988_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
CP031688.1\|AXP59725.1\|1133050_1135078_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|224211

Protein	Function_ID	Function_description	E-value
CP031688.1\|AXP59715.1\|1120247_1122839_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
CP031688.1\|AXP59713.1\|1118867_1119212_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	3.07846e-82
CP031688.1\|AXP59722.1\|1130327_1130693_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|129260	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae. [Hypothetical proteins, Conserved].	7.86445e-56
CP031688.1\|AXP59718.1\|1124999_1126040_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
CP031688.1\|AXP59712.1\|1118512_1118866_-\|UPF0231-family-protein	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	2.75988e-60
CP031688.1\|AXP59716.1\|1122913_1123981_+\|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
CP031688.1\|AXP59717.1\|1124380_1124929_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.63664e-134
CP031688.1\|AXP59723.1\|1130756_1131422_+\|DNA-binding-response-regulator	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	1.31526e-100
CP031688.1\|AXP59719.1\|1126198_1126456_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	2.3023e-37
CP031688.1\|AXP59720.1\|1126535_1128263_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
CP031688.1\|AXP59711.1\|1116160_1118506_-\|penicillin-binding-protein-1B	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
CP031688.1\|AXP59714.1\|1119347_1120154_+\|methionine-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.6579e-160
CP031688.1\|AXP59707.1\|1111580_1112318_+\|LamB/YcsF-family-protein	gnl\|CDD\|212111	cd10800, LamB_YcsF_YbgL_like, Escherichia coli putative lactam utilization protein YbgL and similar proteins. This subfamily of the LamB/YbgL family is represented by the Escherichia coli putative lactam utilization protein YbgL. Although their molecular function of member of this subfamily is unknown, they show high sequence similarity to the Aspergillus nidulans lactam utilization protein LamB, which might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.	5.85636e-152
CP031688.1\|AXP59726.1\|1135113_1136589_-\|cytosol-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
CP031688.1\|AXP59724.1\|1131418_1132774_+\|two-component-system-sensor-histidine-kinase-QseC	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	3.24236e-178
CP031688.1\|AXP59708.1\|1112361_1113555_+\|divalent-metal-cation-transporter	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	2.41376e-86
CP031688.1\|AXP59721.1\|1128322_1128823_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	3.01561e-101
CP031688.1\|AXP59709.1\|1113625_1114960_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
CP031688.1\|AXP59710.1\|1115115_1115988_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
CP031688.1\|AXP59725.1\|1133050_1135078_+\|BCCT-family-transporter	gnl\|CDD\|224211	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane].	0

>CP031688.1|AXP59716.1|1122913_1123981_+|undecaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MLSIFVTFLGAFLTLIVMRPLANWIGLVDKPNYRKRHQGTIPLIGGVSLFVGNLCYYLMEWDQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNIYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGILMYRDGQMDMAHWSFALIVSILPYLMLNLGIPFGPKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITFVSAVCATIGILGEVYYVNEWAMFVGFFILFFLYVYSITHAWRITRWVRRMKRRAKRLKKA
>CP031688.1|AXP59715.1|1120247_1122839_+|bifunctional-uridylyltransferase/uridylyl-removing-protein
MLFSPTLSSPLTPSAVKIERENLKQFELENFSRYSIFELIENRCDFYDALLIQLWQEIELSEQLGIALIAVGGYGRREMFPLSDLDFLILVEQTPSPEIEEKITQFIQFLWDCGFEVGNSVRTLEQCESEGKQDITIATNLLEARFLAGNRPHFDALNELVKRADFWSKEDFFNAKVQEQIERYQRYHNTAYNLEPDIKYSPGGLRDLHLLYWVALRHSGALTLEAILQSGFIYPQEYQQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGEGNPAVEKMMKCFFQALHRISLISNLLIQHYRENVLPSNQDTVIDQLDDDFQLINQCLCLRNSFVFQEKPARILDLFFYLTQYEHANIHSDTLRQLQISLDQLSQKLCEIPAAREKFLRLFNQPNAIKRAFMPMHQYGVLTAYLPQWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQLSDRTLLYIAALFHDIAKGRGGDHAELGAVDIADFAQLHGLDRREIDTLAWLVKSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNGNLWNSWKRSLFASLYEFTGRQFSQGMKELLDYSEKSAENRKLAQQILMRDYSDITPISIEQLWARCPEDYFVRNTPKQIAWHTSLLVDFVEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILRNVLYRNIG
>CP031688.1|AXP59714.1|1119347_1120154_+|methionine-aminopeptidase
MAIPIRTEKEIVKLREACKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKPDIRLNEIGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMVNV
>CP031688.1|AXP59713.1|1118867_1119212_-|iron-sulfur-cluster-insertion-protein-ErpA
MIDDMAVPLTFTDAAANKVKSLISEEENTNLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>CP031688.1|AXP59712.1|1118512_1118866_-|UPF0231-family-protein
MDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNSDKILTALSTAKSLIENQEKVLVGAEYTLFLNADEVMVRANNLAIESDEILEQDFHYYDEESLAFCGTQDFIHFLQSYVDFIA
>CP031688.1|AXP59711.1|1116160_1118506_-|penicillin-binding-protein-1B
MTSQHSAKKSSKNTPKNNRTFKGFLLKFSFTALVLTIFYGGYLDWQIRSKMDGQIWHLPAEVYSRLESVKIADNLAFDEVIQILLDNEYRQTTMVAAPGDFKLEDDSIVILRRAFPFPDKAEPQRVLRLRFSHNKLSRIEDLVTVKTVDEFRLAPKLIAMLQSDNEDRLAIPLQNYPRLLIDTLILTEDRRFYEHNGINPVGILRALIANIRAGQTVQGGSTLTQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLRLMLEHKMIGDELYQLLSQRPLGVQKKGQISRKYPAFIQTLQADLRRELGEHKISSLLGARIFSTMDLKQQAQAENAVVNTVSQLQLKMKNPHLEGAMIITDYRTGEIRAVVGGLQTQYAGFNRALMAKRQIGSLVKPSIYLTALSNPEQFRLNTPINNQPITINVKGSPPWQPRNYDKKYSDSVMLMDALARSLNIPTVNIGMKVGLSKVIDTQKAMGWDNVEIPKVPAMLLGSYSISPYDVTKLYQTLANQGGRIALTTVDSIADRQGNLIFQHDKSAKQVVPQEAAFQTLFAMQQTVERGTARSLQKDYADLHLAGKTGTTNESRDTWFVGIDGKNISTVWLGRDDNGETKLTGASGALQIYKDYLNRTNIEKLAITPPTTVKWVGINQYGDWDCESYRTIPVWLNNGQNFCGETSSPSLTPTTETETPPQESLWDVLDNPNPPAQ
>CP031688.1|AXP59710.1|1115115_1115988_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTQQLPILSLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPRKGEILTQISNFWFNKLAHIMPNHFTGDSVYDVLPKEEADLIRDRTVVCKRLNPIKIESIVRGYLTGSGLKDYKQTGTICGLKLPEGLVEASKLPEAIFTPSSKEEVGNHDINISYAECEKLIGADLAAQVKEKAIALYTVAAEYALTKGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWSVDTYQAGTNPPSFDKQFVRDWLENSGWNKQAPAPKVPENIIQKTVDKYQEALDLLTK
>CP031688.1|AXP59709.1|1113625_1114960_-|argininosuccinate-synthase
MSNTILQNLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENARLIDCRSQLAHEGIAAIQCGAFHISTGGIPYFNTTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPNLKIYKPWLDVQFIEELGGRLEMSQFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEQLSTGMKIVKPIMGVAFWDEKVEIKPETVTVTFEDGVPVALNGKHFDNAVDLILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGIRLGRLLYQGRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEKVEDAPFDPVDRIGQLTMRNLDVSDTRGKLGIYAQTGLLSAIKDSVLPQLGKK
>CP031688.1|AXP59708.1|1112361_1113555_+|divalent-metal-cation-transporter
MASITHRRNAVLGAAFLMATSAIGPGFLTQTATFTNTLLASFGFVILLSILLDIGAQLNIWRIVIVSGKRAQDISNAVFPKAGYFLAALIVMGGLAFNIGNVGGAGLGLNSIFGIAPEMGAVISGIIAILIFLRKEAGLLMDRFAQLMGFIMVALTFYVMFKTEPPVAEAAYHSFIPEKIDPIAIVTLVGGTVGGYITFAGAHRLLDAGIQGEKAMAEVSRSSVSAILIASTMRVVLFLAVLGVVSKGVSLNPKNPAETPFEYVAGNFGQVLFGVVIWAASVTSVIGAAYTSVSFLTTLCPTIERNRNRWIIAFIVISTVVLVTVGKPAAVLVFVGTLNGLILPIALALILLAAYRSDIVGTYKHPVFLAFSGWFVVIIMAILSGKTIISYISSFFS
>CP031688.1|AXP59707.1|1111580_1112318_+|LamB/YcsF-family-protein
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELIAHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPNLKLMGLAGSLMLRIAEEEKLQTISEVFADRHYMPDGSLVPRSQPNAMVESDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNHIKITA
>CP031688.1|AXP59717.1|1124380_1124929_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMKLD
>CP031688.1|AXP59718.1|1124999_1126040_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISPVRYDSYHRLIESLSETKSQRHFSLV
>CP031688.1|AXP59719.1|1126198_1126456_+|HPr-family-phosphocarrier-protein
MYSKDVEIIAPNGLHTRPAAQFVKEAKAFSSEITVTSGGKSASAKSLFKLQTLVLTQGTILTISADGEDEQQAVEHLVALIPTLE
>CP031688.1|AXP59720.1|1126535_1128263_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDEEVARFYEGRAAAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLRSNKVNAGVAASKILDQQVTMLSEIDDEYLKERAGDIRDIANRLVKNILGMHIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNKVTKLVNTGDYLILDAINNQVYINPTASQIDELKALEAKISEEKAELAKLKDLPAITLDGHKVDIVANIGTIRDCDGAERNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKQVVEAMNGRLTVLRTMDIGGDKELSYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASAFGKLAVMFPMIISVEEIRELKAVIETLKAELREEGRVFDNNIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNEFISHLYNPMHPSVLGLIKQVIDASHTEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKALADAALQKPTAAEIDQLIEEFLLENSLN
>CP031688.1|AXP59721.1|1128322_1128823_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLFGSKENKSVEVEIYAPISGEIVNIEDVPDVVFSEKIVGDGIAVRPIGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSIKRGDTVIEFDLPLLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLALKK
>CP031688.1|AXP59722.1|1130327_1130693_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKFALATIFALATTSAFAGFNGNNSQGGFQQTAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEAFEKAELDVLRVEKAE
>CP031688.1|AXP59723.1|1130756_1131422_+|DNA-binding-response-regulator
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSASYDAVVLDLTLPKLDGLDVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLELFMLNKDRVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>CP031688.1|AXP59724.1|1131418_1132774_+|two-component-system-sensor-histidine-kinase-QseC
MKNRSLTLRLISVLCLTALFVWLGSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSTILLESSTTLNKNSQSVLKKSYDDDALAFAIFSKTGKLLFSDGRNGKDFIFNYKTGFYNANIYDDDDKWRIFWRMAANGELVIAVGQELDYREDLIEEMILGQMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQTRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQTEVAQLAGDDVALREQALLHLTQGIDRASQLIEQLLTLSRLDNLQALETLQLLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEDTIVSVKISSSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHGFKVRLENVVKEGRRIGLKAIISL
>CP031688.1|AXP59725.1|1133050_1135078_+|BCCT-family-transporter
MSLSQFMTKRTSFNPLVIGVTLFFILLLMAMIFIAPEQTQALLNQAKSGIFANFSWFYVLTFSVFLGFLLILSVSSLGNIKLGQDEEEPEFSFLSWLAMLFAAGMGVGLMFFGVAEPLTHYLSDITVGSAEHKQQEALLHTLFHWGIHAWAVYGTIALALAYFGFRYKLPLALRSCFYPLLKDRINGKIGDAIDVMALLATLFGIITTLGFGSSQLGAGLEQIGWISQNSFALQVGVIVVVMCLAVFSAISGIGKGVKILSEINLTLAFCLLLFVLISGPTLYLLSAFSDNIGNYFSNLVQLSFKTYAYEQEHTSWFSGWTVLYWAWWCSWAPFVGLFIARISKGRTIREFIFGVLVIPSLFGILWFTVFGNTAVWLNDGIAAGGLGEFISSPEILLFKFLNYLPLPTITGFVSLLVISLFFITSADSGIYVLNNIASRDKSLASPAWQAIMWGTLMSVVAIVLMQSGGLANLQTMTLIVALPFALLMLVMCFSLWKGLIADKKYFSTKVNPTSIFWSGDKWKSHLEQMMNQTQEKDILRFLKNTALPAMRELRQELTGKYNLSVEINTLFEQEEPALELVIHKESMRDFMYGIKSVGREVSEQLINDENLPHIQHSVTYEPYTYFFDGRVGYDVQYMDQDELIADMLKQYERYLSLLDDVGQELMAHEQTELAE
>CP031688.1|AXP59726.1|1135113_1136589_-|cytosol-aminopeptidase
MKYQAKNTALSQATDCIVLGIYENNKFSKSFNEIDQLTQGYLNDLVKSGELTGKLAQTILLRDLQGLSAKRLLIVGCGKKGELTERQYKQIIQAVLKTLKETNTREVISYLTEIELKDRDLYWNIRFAIETIEHTNYQFDHFKSQKAETSVLESFIFNTDCNQAQQAISHANAISSGIKAARDIANMPPNICNPAYLAEQAKNLAENSTALSLKVVDEEEMAKLGMNAYLAVSKGSENRAYMSVLTFNNAPDKNAKPIVLVGKGLTFDAGGISLKPAADMDEMKYDMCGAASVFGTMKAIAQLNLPLNVIGVLAGCENLPDGNAYRPGDILTTMNGLTVEVLNTDAEGRLVLCDALTYVERFEPELVIDVATLTGACVVALGQHNSGLVSTDNNLANALLQAATETTDKAWRLPLSEEYQEQLKSPFADLANIGGRWGGAITAGAFLSNFTKKYRWAHLDIAGTAWLQGANKGATGRPVSLLTQFLINQVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

614196 : 712240

106

Haemophilus_phage(10.0%)

tail,holin,integrase,protease,tRNA,portal,terminase

attL 622928:622944|attR 646649:646665

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP59272.1\|614196_615489_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
AXP59273.1\|615496_616168_-	DNA mismatch repair endonuclease MutH	NA	NA	NA	NA
AXP59274.1\|616164_616704_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.3e-24	37.8
AXP59275.1\|616779_618135_-	transporter	NA	NA	NA	NA
AXP59276.1\|618341_618629_+	DUF406 family protein	NA	NA	NA	NA
AXP59277.1\|618726_619551_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
AXP59278.1\|619560_620193_-	ADP-ribose diphosphatase	A0A1S6L1P8	Vibrio_phage	1.0e-24	34.2
AXP59279.1\|620380_621700_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	7.3e-41	39.5
AXP59280.1\|621701_622916_-	cupin domain-containing protein	NA	NA	NA	NA
AXP59281.1\|622918_623227_-	RnfH family protein	NA	NA	NA	NA
622928:622944	attL	NA	NA	NA	NA
AXP59282.1\|623393_623978_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
AXP59283.1\|624026_625118_+	redox-regulated ATPase YchF	NA	NA	NA	NA
AXP59284.1\|627102_628245_-	ribonuclease D	U3REX2	uncultured_virus	3.2e-08	31.4
AXP59285.1\|630033_630585_-	Slp family lipoprotein	NA	NA	NA	NA
AXP59286.1\|630609_631320_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AXP59287.1\|631332_633255_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.5e-98	33.2
AXP59288.1\|633581_633992_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AXP59289.1\|634008_634695_+	protein TolQ	NA	NA	NA	NA
AXP59290.1\|634765_635185_+	protein TolR	NA	NA	NA	NA
AXP59291.1\|635200_636553_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AXP59292.1\|636594_637878_+	protein TolB	NA	NA	NA	NA
AXP59293.1\|637901_638363_+	outer membrane protein P6	NA	NA	NA	NA
AXP59294.1\|638796_639822_-\|integrase	site-specific integrase	K7PKD7	Enterobacteria_phage	7.4e-57	35.4
AXP59295.1\|639719_640034_-	DNA-binding protein	NA	NA	NA	NA
AXP59296.1\|640160_640448_-	hypothetical protein	NA	NA	NA	NA
AXP59297.1\|640451_640721_-	hypothetical protein	NA	NA	NA	NA
AXP60357.1\|640985_641474_-	hypothetical protein	NA	NA	NA	NA
AXP59298.1\|641590_642007_-	hypothetical protein	E5EYK4	Acinetobacter_phage	1.1e-08	35.9
AXP59299.1\|642010_642664_-	hypothetical protein	A0A0M3LNU4	Mannheimia_phage	1.9e-05	35.1
AXP59300.1\|642714_643878_-	DNA (cytosine-5-)-methyltransferase	A0A2I7RFJ9	Vibrio_phage	7.5e-90	46.4
AXP59301.1\|643885_644245_-	hypothetical protein	NA	NA	NA	NA
AXP59302.1\|644241_644487_-	hypothetical protein	NA	NA	NA	NA
AXP59303.1\|644483_645380_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.4e-56	44.0
AXP59304.1\|645504_646527_-	hypothetical protein	A0A0U4B0I3	Pseudomonas_phage	1.6e-32	56.4
AXP59305.1\|646588_647023_-	single-stranded DNA-binding protein	A0A059WRL7	Vibrio_phage	5.7e-19	36.9
646649:646665	attR	NA	NA	NA	NA
AXP59306.1\|647022_647673_-	translocation protein TolB precursor	A0A0M3LP90	Mannheimia_phage	5.8e-84	70.6
AXP59307.1\|648607_648901_-	hypothetical protein	NA	NA	NA	NA
AXP59308.1\|648897_649245_-	hypothetical protein	NA	NA	NA	NA
AXP59309.1\|651393_651750_+\|holin	phage holin, lambda family	NA	NA	NA	NA
AXP59310.1\|651718_652321_+	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	3.7e-56	53.4
AXP59311.1\|652313_652637_+	DUF2570 domain-containing protein	Q7Y5U9	Haemophilus_phage	3.9e-20	54.6
AXP59312.1\|652548_652830_+	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
AXP59313.1\|653103_653577_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	4.9e-40	53.6
AXP59314.1\|653579_655703_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	1.4e-272	66.5
AXP59315.1\|655693_655936_+	hypothetical protein	NA	NA	NA	NA
AXP59316.1\|655938_657462_+\|portal	phage portal protein	S5MW34	Escherichia_phage	1.3e-155	57.3
AXP60358.1\|657412_659440_+\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	5.7e-202	57.0
AXP59317.1\|659518_659842_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	2.8e-10	41.8
AXP59318.1\|659822_660134_+	hypothetical protein	NA	NA	NA	NA
AXP59319.1\|660136_660667_+\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	7.5e-21	39.6
AXP59320.1\|660675_661086_+\|tail	phage tail protein	NA	NA	NA	NA
AXP59321.1\|661088_661739_+	hypothetical protein	NA	NA	NA	NA
AXP59322.1\|662013_662421_+	hypothetical protein	NA	NA	NA	NA
AXP59323.1\|662465_662690_+	DUF4035 domain-containing protein	NA	NA	NA	NA
AXP59324.1\|662758_663142_+	diaminopimelate decarboxylase	NA	NA	NA	NA
AXP59325.1\|663125_663428_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXP60359.1\|663443_663680_+	hypothetical protein	NA	NA	NA	NA
AXP59326.1\|663731_667091_+\|tail	tail tape measure protein	A0A1C6ZDP8	Pseudomonas_phage	4.3e-45	48.1
AXP59327.1\|667099_667432_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	7.7e-16	37.6
AXP59328.1\|667941_668481_+	hypothetical protein	NA	NA	NA	NA
AXP59329.1\|669199_669850_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	3.3e-34	39.6
AXP59330.1\|669851_670559_+	hypothetical protein	A0A1B1IV85	uncultured_Mediterranean_phage	3.4e-53	43.2
AXP59331.1\|670497_671217_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	4.7e-34	40.2
AXP59332.1\|671220_674859_+\|tail	phage tail protein	A0A0R6PIC9	Moraxella_phage	8.2e-143	37.4
AXP60360.1\|675055_676678_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	3.5e-210	63.7
AXP59333.1\|676689_677292_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.6e-96	93.0
AXP59334.1\|677288_677747_+	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	4.9e-45	55.8
AXP59335.1\|678395_679121_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
AXP59336.1\|679173_679626_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
AXP59337.1\|679692_680907_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	1.5e-32	35.5
AXP59338.1\|680930_681347_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	2.0e-53	80.6
AXP59339.1\|681404_681728_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	4.4e-24	46.7
AXP59340.1\|681740_682265_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
AXP59341.1\|682315_683002_+	DUF2625 domain-containing protein	NA	NA	NA	NA
AXP59342.1\|683020_684880_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.3e-109	42.3
AXP59343.1\|684919_685261_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
AXP59344.1\|685260_685455_+	Fe-S assembly protein IscX	NA	NA	NA	NA
AXP59345.1\|685505_686120_-	hypothetical protein	NA	NA	NA	NA
AXP59346.1\|686137_687409_-\|tRNA	histidine--tRNA ligase	A0A1V0SLE3	Klosneuvirus	2.0e-27	26.2
AXP59347.1\|687418_688525_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA
AXP59348.1\|688533_689445_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXP59349.1\|689516_690056_-	type IV pilus biogenesis/stability protein PilW	NA	NA	NA	NA
AXP59350.1\|690156_691329_-\|tRNA	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	NA	NA	NA	NA
AXP59351.1\|691553_692432_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
AXP59352.1\|692524_692989_-	hypothetical protein	NA	NA	NA	NA
AXP59353.1\|693159_694041_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
AXP59354.1\|694040_694961_+	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	2.3e-17	25.4
AXP59355.1\|694964_695813_+	metal ABC transporter permease	NA	NA	NA	NA
AXP59356.1\|695805_696621_+	metal ABC transporter permease	NA	NA	NA	NA
AXP59357.1\|696720_697368_-	thiaminase II	NA	NA	NA	NA
AXP59358.1\|697377_698322_-	thiamine biosynthesis protein	NA	NA	NA	NA
AXP59359.1\|698344_699082_-	ABC transporter permease	G3M9Y4	Bacillus_virus	4.9e-10	24.1
AXP59360.1\|699081_699801_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.1e-26	34.0
AXP60361.1\|700217_701222_+	CMP-Neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase	NA	NA	NA	NA
AXP59361.1\|701394_702411_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.2e-88	48.9
AXP59362.1\|702552_703830_+	MFS transporter	NA	NA	NA	NA
AXP59363.1\|703914_704559_+	adenylate kinase	NA	NA	NA	NA
AXP59364.1\|704718_705321_-	cytochrome C	NA	NA	NA	NA
AXP59365.1\|705335_705788_-	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
AXP59366.1\|705784_706648_-	ferredoxin-type protein NapH	NA	NA	NA	NA
AXP59367.1\|706647_707487_-	ferredoxin-type protein NapG	NA	NA	NA	NA
AXP59368.1\|707540_710024_-	periplasmic nitrate reductase subunit alpha	NA	NA	NA	NA
AXP59369.1\|710060_710342_-	chaperone NapD	NA	NA	NA	NA
AXP59370.1\|710334_710865_-	ferredoxin-type protein NapF	NA	NA	NA	NA
AXP59371.1\|711070_711415_-	DUF469 domain-containing protein	NA	NA	NA	NA
AXP59372.1\|711499_712240_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA

DBSCAN-SWA_2

753910 : 757381

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP59415.1\|753910_754117_+	copper chaperone	A0A218MNH0	uncultured_virus	3.0e-10	52.2
AXP59416.1\|754191_754398_+	copper chaperone	A0A218MNH0	uncultured_virus	6.7e-10	50.7
AXP59417.1\|754471_754678_+	copper chaperone	A0A218MNH0	uncultured_virus	6.7e-10	50.7
AXP59418.1\|754751_754958_+	copper chaperone	A0A218MNH0	uncultured_virus	3.0e-10	52.2
AXP59419.1\|755031_755238_+	copper chaperone	A0A218MNH0	uncultured_virus	6.7e-10	50.7
AXP59420.1\|755212_757381_+	Cu(2+)-exporting ATPase	A0A218MNH6	uncultured_virus	2.5e-195	52.0

DBSCAN-SWA_3

1325477 : 1341712

Haemophilus_phage(42.86%)

head,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP59903.1\|1325477_1325813_-	DUF4325 domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	8.1e-13	41.5
AXP59904.1\|1325815_1326892_-	hypothetical protein	NA	NA	NA	NA
AXP59905.1\|1326943_1327642_-	XRE family transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.4e-112	84.5
AXP59906.1\|1327752_1327941_+	DNA-binding protein	Q7Y5W4	Haemophilus_phage	6.5e-28	93.5
AXP59907.1\|1327989_1328430_+	hypothetical protein	A0A0U4B0E3	Pseudomonas_phage	1.5e-14	32.2
AXP59908.1\|1328478_1329153_+	hypothetical protein	D0UIL6	Aggregatibacter_phage	6.9e-80	67.9
AXP59909.1\|1329149_1329866_+	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	2.2e-60	61.0
AXP59910.1\|1329850_1330486_+	replication P	A0A1I9KFB0	Aeromonas_phage	4.8e-06	24.7
AXP59911.1\|1330482_1330707_+	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
AXP59912.1\|1330743_1331160_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.1e-62	84.7
AXP59913.1\|1331800_1332466_+	HNH endonuclease	A0A2I7QND8	Vibrio_phage	2.2e-38	42.8
AXP59914.1\|1332496_1332868_+	hypothetical protein	NA	NA	NA	NA
AXP59915.1\|1332917_1333883_-	hypothetical protein	Q8HA04	Enterobacteria_phage	1.2e-88	58.8
AXP59916.1\|1334240_1334909_+	hypothetical protein	D0UIM5	Aggregatibacter_phage	6.7e-67	62.3
AXP59917.1\|1335245_1335602_+\|holin	phage holin, lambda family	NA	NA	NA	NA
AXP59918.1\|1335570_1336173_+	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	3.7e-56	53.4
AXP59919.1\|1336165_1336489_+	DUF2570 domain-containing protein	Q7Y5U9	Haemophilus_phage	7.8e-21	54.6
AXP59920.1\|1336400_1336682_+	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
AXP59921.1\|1336683_1336962_-	XRE family transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.5e-16	66.2
AXP59922.1\|1337006_1337519_+\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	1.0e-19	39.2
AXP60380.1\|1337574_1338849_+\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	7.9e-125	55.0
AXP59923.1\|1338850_1340185_+	DUF1073 domain-containing protein	Q7Y5U6	Haemophilus_phage	2.1e-213	84.2
AXP59924.1\|1340084_1341395_+\|head	phage head morphogenesis protein	Q7Y5U5	Haemophilus_phage	2.0e-107	77.9
AXP59925.1\|1341535_1341712_+	DUF2213 domain-containing protein	Q7Y5U2	Haemophilus_phage	8.5e-22	93.1

DBSCAN-SWA_4

1350869 : 1362905

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP59937.1\|1350869_1353734_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.2e-149	37.7
AXP59938.1\|1353768_1354044_-	hydrogenase maturation factor HybG	NA	NA	NA	NA
AXP59939.1\|1354174_1355608_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.3e-35	38.7
AXP59940.1\|1355645_1356647_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.2e-46	40.0
AXP59941.1\|1356699_1357086_-	tautomerase family protein	NA	NA	NA	NA
AXP59942.1\|1357134_1357722_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-34	40.0
AXP59943.1\|1357734_1359291_-	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
AXP60381.1\|1359392_1360157_-	glycosyltransferase	A7IW34	Paramecium_bursaria_Chlorella_virus	1.5e-14	29.1
AXP59944.1\|1360381_1360879_-	non-heme ferritin	NA	NA	NA	NA
AXP59945.1\|1360894_1361443_-	non-heme ferritin	NA	NA	NA	NA
AXP60382.1\|1361900_1362905_+	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5

DBSCAN-SWA_5

1380369 : 1458124

Escherichia_phage(13.64%)

plate,tail,tRNA,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP59959.1\|1380369_1381311_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	9.3e-123	83.1
AXP59960.1\|1381312_1381642_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	6.9e-25	52.8
AXP59961.1\|1381749_1381959_+	molybdenum-pterin-binding protein	NA	NA	NA	NA
AXP59962.1\|1382013_1384503_+	TonB-dependent receptor	NA	NA	NA	NA
AXP59963.1\|1384606_1387387_+	insulinase family protein	NA	NA	NA	NA
AXP59964.1\|1387509_1389441_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.2e-131	38.6
AXP59965.1\|1389725_1390310_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
AXP59966.1\|1390386_1392993_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	6.4e-89	34.5
AXP59967.1\|1393088_1394006_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXP59968.1\|1394069_1395494_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit beta	NA	NA	NA	NA
AXP59969.1\|1395504_1397043_-	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha	NA	NA	NA	NA
AXP59970.1\|1397303_1399769_-	glycogen/starch/alpha-glucan phosphorylase	A0A140XAG6	Dickeya_phage	5.0e-19	54.2
AXP59971.1\|1400015_1401446_-	glycogen synthase GlgA	NA	NA	NA	NA
AXP59972.1\|1401553_1402888_-	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA
AXP59973.1\|1402877_1404854_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA
AXP59974.1\|1404952_1407145_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
AXP59975.1\|1407154_1409254_-	4-alpha-glucanotransferase	NA	NA	NA	NA
AXP59976.1\|1409315_1409780_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
AXP59977.1\|1409845_1411513_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	8.1e-255	77.5
AXP59978.1\|1411932_1413408_-	ribonuclease G	NA	NA	NA	NA
AXP59979.1\|1413523_1415038_+	sodium/proline symporter PutP	NA	NA	NA	NA
AXP59980.1\|1415034_1416000_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AXP59981.1\|1416042_1416921_-	cytidine deaminase	NA	NA	NA	NA
AXP59982.1\|1417194_1417677_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AXP59983.1\|1418153_1419392_-	peptidase T	NA	NA	NA	NA
AXP59984.1\|1419657_1420806_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	1.9e-29	37.1
AXP59985.1\|1420789_1421650_+	spermidine/putrescine ABC transporter permease	Q6GZ02	Mycoplasma_phage	4.5e-15	28.2
AXP59986.1\|1421649_1422420_+	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
AXP59987.1\|1422550_1423633_+	extracellular solute-binding protein	NA	NA	NA	NA
AXP59988.1\|1423713_1425657_-	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.2e-52	29.8
AXP59989.1\|1425750_1427136_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
AXP59990.1\|1427228_1427924_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
AXP59991.1\|1427942_1428365_-	hypothetical protein	NA	NA	NA	NA
AXP60383.1\|1428500_1428962_+	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	5.9e-30	47.0
AXP59992.1\|1428963_1430163_+	cysteine desulfurase	Q2XUY6	environmental_halophage	2.2e-60	31.6
AXP59993.1\|1430159_1430540_+	hypothetical protein	NA	NA	NA	NA
AXP59994.1\|1430530_1431316_+	hypothetical protein	NA	NA	NA	NA
AXP59995.1\|1431442_1432282_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	6.1e-41	38.9
AXP59996.1\|1432314_1433448_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXP59997.1\|1433528_1434449_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
AXP59998.1\|1434448_1434835_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
AXP59999.1\|1434999_1436670_+	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	1.4e-49	30.5
AXP60000.1\|1436662_1437928_+	restriction endonuclease subunit S	NA	NA	NA	NA
AXP60001.1\|1437920_1438967_+	hypothetical protein	NA	NA	NA	NA
AXP60384.1\|1438968_1442136_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	9.5e-79	30.6
AXP60002.1\|1442214_1444749_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.8e-27	26.4
AXP60003.1\|1444760_1446248_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
AXP60004.1\|1446264_1446720_-	ribosome maturation factor RimP	NA	NA	NA	NA
AXP60005.1\|1448381_1449146_-	hypothetical protein	NA	NA	NA	NA
AXP60006.1\|1449149_1449677_-	hypothetical protein	NA	NA	NA	NA
AXP60385.1\|1449686_1450826_-	hypothetical protein	NA	NA	NA	NA
AXP60007.1\|1450842_1451211_-	hypothetical protein	NA	NA	NA	NA
AXP60008.1\|1451224_1452046_-	hypothetical protein	NA	NA	NA	NA
AXP60009.1\|1452102_1452606_-	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	1.7e-51	63.6
AXP60010.1\|1452602_1453205_-	hypothetical protein	Q94MX9	Haemophilus_virus	1.7e-93	90.0
AXP60011.1\|1453216_1455739_-\|tail	phage tail protein	Q94MY0	Haemophilus_virus	2.2e-243	65.4
AXP60012.1\|1455747_1456284_-\|tail	phage tail protein I	M1T2R2	Escherichia_phage	1.6e-50	52.5
AXP60013.1\|1456273_1457188_-\|plate	baseplate assembly protein	Q19UQ5	Mannheimia_phage	5.1e-94	59.5
AXP60014.1\|1457184_1457523_-\|plate	baseplate assembly protein W	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
AXP60015.1\|1457524_1458124_-\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.2e-44	66.0

DBSCAN-SWA_6

1463074 : 1498939

Mannheimia_phage(56.25%)

tail,protease,head,capsid,lysis,tRNA,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP60020.1\|1463074_1463248_-	hypothetical protein	Q19UR2	Mannheimia_phage	3.2e-05	53.3
AXP60021.1\|1463350_1463662_+	hypothetical protein	NA	NA	NA	NA
AXP60022.1\|1463672_1463855_-	hypothetical protein	Q19UR2	Mannheimia_phage	8.8e-06	47.8
AXP60023.1\|1463958_1464306_+	hypothetical protein	NA	NA	NA	NA
AXP60024.1\|1464306_1464768_-	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	1.5e-25	48.9
AXP60025.1\|1464767_1465238_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.5e-28	47.8
AXP60026.1\|1465234_1465450_-	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	1.1e-10	50.0
AXP60027.1\|1465446_1465710_-	hypothetical protein	NA	NA	NA	NA
AXP60028.1\|1465624_1465975_-	chemotaxis protein	NA	NA	NA	NA
AXP60029.1\|1465959_1466478_-	lysozyme	A0A0M3LPQ1	Mannheimia_phage	2.5e-37	46.6
AXP60030.1\|1466470_1466692_-\|lysis	lysis protein	NA	NA	NA	NA
AXP60031.1\|1466693_1466903_-\|tail	phage tail protein	NA	NA	NA	NA
AXP60032.1\|1466902_1467409_-\|head	phage head protein	A0A0M3LNL8	Mannheimia_phage	2.8e-33	51.0
AXP60033.1\|1467702_1468353_-\|terminase	terminase	Q19US0	Mannheimia_phage	4.1e-45	46.0
AXP60034.1\|1468364_1469414_-\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	2.6e-89	51.9
AXP60035.1\|1469435_1470251_-\|capsid	capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	6.9e-66	60.5
AXP60036.1\|1470415_1472197_+\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	1.6e-216	65.2
AXP60037.1\|1472206_1473217_+\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.8e-116	60.4
AXP60038.1\|1473924_1474608_-	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
AXP60039.1\|1474712_1475375_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AXP60040.1\|1475421_1476534_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXP60041.1\|1476684_1478733_+\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	2.2e-60	29.3
AXP60042.1\|1478843_1479704_+	S-adenosyl-L-methionine-dependent methyltransferase TehB	NA	NA	NA	NA
AXP60043.1\|1479747_1480449_-	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	1.3e-07	28.5
AXP60044.1\|1480500_1481307_-	methyltransferase domain-containing protein	NA	NA	NA	NA
AXP60386.1\|1481626_1482019_+	hypothetical protein	NA	NA	NA	NA
AXP60045.1\|1482155_1483919_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
AXP60046.1\|1484523_1487166_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.1e-103	32.3
AXP60047.1\|1487220_1488297_-	homoserine O-acetyltransferase	NA	NA	NA	NA
AXP60048.1\|1488454_1489135_+	vancomycin high temperature exclusion protein	NA	NA	NA	NA
AXP60049.1\|1489422_1490736_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AXP60050.1\|1490728_1491619_-	acetyl-CoA carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA
AXP60051.1\|1491812_1493204_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	31.2
AXP60052.1\|1493256_1496697_-	transcription-repair coupling factor	NA	NA	NA	NA
AXP60053.1\|1496968_1498939_-\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA

DBSCAN-SWA_7

1663263 : 1671772

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP60190.1\|1663263_1663947_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-54	50.7
AXP60191.1\|1663939_1664365_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	2.3e-20	42.0
AXP60192.1\|1664365_1665001_+	7-carboxy-7-deazaguanine synthase	S4TZT1	uncultured_phage	8.7e-16	30.3
AXP60392.1\|1665390_1665624_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
AXP60193.1\|1665607_1667791_+	DNA helicase II	A7KV33	Bacillus_phage	6.7e-116	37.6
AXP60194.1\|1667910_1668882_+	ABC transporter permease subunit	NA	NA	NA	NA
AXP60195.1\|1668896_1669784_+	ABC transporter permease subunit	NA	NA	NA	NA
AXP60196.1\|1669793_1670786_+	dipeptide transport ATP-binding protein DppD	G3M9Y6	Bacillus_virus	2.0e-14	30.8
AXP60197.1\|1670788_1671772_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-20	32.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage