CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031683	Haemophilus influenzae strain P662-7189 chromosome, complete genome	1 crisprs	DinG,DEDDh,cas3,WYL	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031683_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031683_1

1207793-1207880

Orphan

Consensus_repeat	Method
ACCTTCCCCCGCAAGCAAGGGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031683_1

>merge|CP031683|1|1207793-1207880|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGGCAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGATACCTTCCCCCGCAAGCAGGGGAAGG

>CP031683|1|1|1207793-1207880|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGG	CAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGAT
ACCTTCCCCCGCAAGCAGGGGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
CP031683.1\|AXP77963.1\|1204564_1205620_+\|molybdenum-import-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP031683.1\|AXP78615.1\|1203888_1204578_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
CP031683.1\|AXP78614.1\|1201150_1201936_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133038
CP031683.1\|AXP77959.1\|1199461_1200235_+\|glycosyltransferase-family-25-protein	unknown	unknown	gnl\|CDD\|225843
CP031683.1\|AXP77964.1\|1205643_1207017_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
CP031683.1\|AXP77962.1\|1202950_1203715_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
CP031683.1\|AXP77960.1\|1200246_1201131_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP031683.1\|AXP77971.1\|1213101_1213680_-\|electron-transport-complex-subunit-A	unknown	unknown	gnl\|CDD\|235352
CP031683.1\|AXP77969.1\|1210308_1212432_-\|electron-transport-complex-subunit-RsxC	unknown	unknown	gnl\|CDD\|235334
CP031683.1\|AXP77970.1\|1212432_1213014_-\|electron-transport-complex-subunit-B	unknown	unknown	gnl\|CDD\|235347
CP031683.1\|AXP77975.1\|1218255_1220208_-\|adhesin	unknown	unknown	gnl\|CDD\|375681
CP031683.1\|AXP77974.1\|1216021_1218178_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727
CP031683.1\|AXP77967.1\|1208604_1209228_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
CP031683.1\|AXP77966.1\|1207895_1208603_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
CP031683.1\|AXP77961.1\|1202045_1202813_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182640
CP031683.1\|AXP77973.1\|1215288_1215954_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|234990
CP031683.1\|AXP77965.1\|1207075_1207711_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
CP031683.1\|AXP77968.1\|1209227_1210304_-\|electron-transport-complex-subunit-D	unknown	unknown	gnl\|CDD\|234844
CP031683.1\|AXP77958.1\|1198388_1199450_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340847
CP031683.1\|AXP77972.1\|1214027_1215089_-\|protease-SohB	unknown	unknown	gnl\|CDD\|236978

Protein	Function_ID	Function_description	E-value
CP031683.1\|AXP77963.1\|1204564_1205620_+\|molybdenum-import-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP031683.1\|AXP78615.1\|1203888_1204578_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	1.3737e-137
CP031683.1\|AXP78614.1\|1201150_1201936_+\|glycosyltransferase	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	2.3253e-117
CP031683.1\|AXP77959.1\|1199461_1200235_+\|glycosyltransferase-family-25-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	6.22864e-55
CP031683.1\|AXP77964.1\|1205643_1207017_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	1.13115e-164
CP031683.1\|AXP77962.1\|1202950_1203715_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	3.40456e-98
CP031683.1\|AXP77960.1\|1200246_1201131_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	7.68429e-32
CP031683.1\|AXP77971.1\|1213101_1213680_-\|electron-transport-complex-subunit-A	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	2.55597e-111
CP031683.1\|AXP77969.1\|1210308_1212432_-\|electron-transport-complex-subunit-RsxC	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0
CP031683.1\|AXP77970.1\|1212432_1213014_-\|electron-transport-complex-subunit-B	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.12731e-113
CP031683.1\|AXP77975.1\|1218255_1220208_-\|adhesin	gnl\|CDD\|375681	pfam18254, HMw1_D2, HMW1 domain 2. This domain is found in Actinobacillus pleuropneumoniae HMW1C (ApHMW1C). HMW1 adhesin is an N-linked glycoprotein that mediates adherence to respiratory epithelium through N-glycosylation of protein acceptor sites and O-glycosylation of sugar acceptor sites. This domain forms an all alpha domain (AAD) when combined with the N-terminal domain. The AAD interacts extensively with the C-terminal GT-B fold in order to create a unique groove with the potential to accommodate the acceptor protein.	8.71742e-48
CP031683.1\|AXP77974.1\|1216021_1218178_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0
CP031683.1\|AXP77967.1\|1208604_1209228_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	5.13678e-128
CP031683.1\|AXP77966.1\|1207895_1208603_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.5237e-131
CP031683.1\|AXP77961.1\|1202045_1202813_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	2.3464e-84
CP031683.1\|AXP77973.1\|1215288_1215954_+\|DUF2057-domain-containing-protein	gnl\|CDD\|234990	PRK01904, PRK01904, DUF2057 domain-containing protein.	7.22893e-116
CP031683.1\|AXP77965.1\|1207075_1207711_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	8.06206e-140
CP031683.1\|AXP77968.1\|1209227_1210304_-\|electron-transport-complex-subunit-D	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
CP031683.1\|AXP77958.1\|1198388_1199450_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	6.66878e-136
CP031683.1\|AXP77972.1\|1214027_1215089_-\|protease-SohB	gnl\|CDD\|236978	PRK11778, PRK11778, putative inner membrane peptidase; Provisional.	0

>CP031683.1|AXP77965.1|1207075_1207711_-|endonuclease-III
MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVEF
>CP031683.1|AXP77964.1|1205643_1207017_-|sodium-dependent-transporter
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFALSLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNIPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
>CP031683.1|AXP77963.1|1204564_1205620_+|molybdenum-import-ATP-binding-protein-ModC
MLQINVKKQLGKLALQANIQVPDQGVTAIFGLSGSGKTSLINLVSGLIQPDEGFIRLNDRTLVDMESQESLPTHLRKIGYVFQDARLFPHYTVKGNLRYGMKHVSQDDFNYIVDLLGITHLLKRYPLTLSGGEKQRVAIGRALLTDPDILLMDEPLSALDVPRKRELMQYLERLSKEINIPILYVTHSLDELLRLADRVVLMENGIVQAYDSVEKIWNSPIFAPWKGENEQSSVLALPVHLHNPPYKMTALSLGEQALWIHQVPANVGERVLVCIYSSDVSIILQKPEQTSIRNILRGKITQIEIQDSRVDLAVLVEGNKIWASISKWAQNELRFAVGQDVYVQIKAVSVM
>CP031683.1|AXP78615.1|1203888_1204578_+|molybdate-ABC-transporter-permease-subunit
MEISAINLSLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRNGFIGKYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQTLGASAWRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAGETQTIPLAMYSFIQTPAAEEQTARLCLFAIILSLISLLLSEWLSKRMQKKLGQGNVAN
>CP031683.1|AXP77962.1|1202950_1203715_+|molybdate-ABC-transporter-substrate-binding-protein
MKKLTKISTALLIAGLGFSFAASAKVTVFAAASMTDALQQVAKDYAKQNPKNEVVFSFASSSTLAKQVEEGAPADIFVSASNKWMKYLSEKDLTVKETEKVLVGNDLVLIAPAKSAVNSVDIAKGEWINALKDSYLSVGDPAHVPAGQYAAEALTKLNLWDKVQDRLARAKDVRGALALVERAEAPYGIVYSTDAKVSQQVKTVAVFPADSHKPVVYPVSIVKGHDNADSRDFLKYLESDAAKKVLVGYGFSAK
>CP031683.1|AXP77961.1|1202045_1202813_-|LysR-family-transcriptional-regulator
MKNTEILLTIKLQQALFIDPKRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTVLTTYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRIIDSRCVVDVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKISEQPLVNQPNQFSVNIKSLNEEEAILQFAESNIEFCATVHQPNQWQIGQQVWIHIDQEQIILATLG
>CP031683.1|AXP78614.1|1201150_1201936_+|glycosyltransferase
MSLYIKENPQFLRECFESLVAQTRQADEIVLVFDGAVTPELESVVTEFETKLPLKLVKLPQNRGLGKALNEGLLHCTYDWVFRMDTDDICVPDRFEKQVAFIEQHPESIIFGGQIAEFGKNVNDIVAYRNVPTSAQEIIKFTQKRCPFNHMTVAYQKSAVINCGGYEDLQEDYYLWIKLVAQGLYMANLPDILVYARVGNGMVSRRRGVNQAKAEWRLFKLKYRLGIQGLLSGLFTFALRFGSRLLPTSLLKKLYQTFLRK
>CP031683.1|AXP77960.1|1200246_1201131_+|glycosyltransferase-family-2-protein
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDYSKERVVVEQRYSFPVTVIRNETNQGAAESRNIGARASKGDWLLFLDDDDRFMPEKSEKILQVIEQNPDINFIYHPAKCEMVNEGFSYVTQPIEPQEISTERILLANKIGGMPMVAIKKEMFLKIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINASYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
>CP031683.1|AXP77959.1|1199461_1200235_+|glycosyltransferase-family-25-protein
MLKKYLISLDKDIQRRKLFFSQKNTEDFQIFSAINTMQKDWDELASIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIIEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINSFNDTDLEINYPTTFSFLCKKTGNVNYAFPYKSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQDFNIRNKVVRPLMVIENPVLISNLESVRGSLSNNLLKKLMKYPLKKIFAIKKNLAN
>CP031683.1|AXP77958.1|1198388_1199450_+|glycosyltransferase-family-4-protein
MKKIGFFIMNIESAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIITIANPNTLLPKNKLAKWENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFTPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEKNNIEEMVKGLDLLINNPELYQQMSDKSRLMSEDYGIEKIIEEWKGIL
>CP031683.1|AXP77966.1|1207895_1208603_-|electron-transport-complex-subunit-E
MTDLTEKNTALEEEKIESAVENQQKSIWKEIFAQGIWKNNPAVVQLLGLCPLLAVSSTATNALGLSLATMLVLTCTNTVISLFRQYIPKEIRIPIYVMIIATTVTAVQLLMNAYTYTLYQSLGIFIPLIVTNCIIIGRAEAFASKNSLLHSIWDGFSMGLGMALSLTILGALREIIGQGTIFEGIENLFGEQAKFLTHHIYHTDSSFLLFILPPGAFIGLGLLLAIKNRIDNVKK
>CP031683.1|AXP77967.1|1208604_1209228_-|electron-transport-complex-subunit-RsxG
MGTVKITSRYGILLGFIALLCTAISAGIYFLTKDKIDAVIAAQQRELLLQVIPQDYFNNNLLESAVIPQDKNFVGIQKIYFAKKDGNISAYAYETTAPDGYSGDIRLLVGLDPKGEVLGVRVIEHHETPGLGDKIERRISNWILGFTNQSINEHNLSEWAVKKDGGKFDQFSGATITPRAVVNQTKRSALIMLNNQALLQQLSTQVK
>CP031683.1|AXP77968.1|1209227_1210304_-|electron-transport-complex-subunit-D
MFKMVSSPHTHSGKLTARIMLWVILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIAIKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWVIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDTFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRIIHWQIPVAMLVTFFCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGYPTKGRK
>CP031683.1|AXP77969.1|1210308_1212432_-|electron-transport-complex-subunit-RsxC
MADVLSRFNSGKLWDFKGGIHPPEMKSQSNSQPLRHLPLGTDFYIPLKQHLGTTGNLLIKEGDYVLKGQALTKGDGLRMLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQADGLDQWIERNPIDDFSTLSSEQLIHKIYQAGIAGLGGAVFPTAAKIQSAEQKVKLLIINGAECEPYITCDDRLMRERADEIIKGIRILRYILHPEKVVIAIEDNKPEAISAIRNALQGANDISIRVIPTKYPSGATKQLIYLLTGIEVPSGARSSSIGVLMQNVGTMFAIKRAVINDEPLIERVVTLTGNKIAEKGNYWVRLGTPISQILSDAGYQFDKHFPIFAGGPMMGLELPNLNAPVTKLVNCLLAPDYLEYAEPKAEQACIRCSSCSDACPVNLMPQQLYWFARSEDHKKSEEYALKDCIECGICAYVCPSHIPLIQYFRQEKAKIWQIKEKQKKSDEAKIRFEAKQARMEREEQERKARSQRAAQARREELAQTKGEDPVKAALERLKAKKANETESTQIKTLTSEKGEVLPDNTDLMAQRKARRLARQQAASQVENQEQQTQPTDAKKAAVAAALARAKAKKLAQTNSTSEAISNTQTAENEVEKTKSAVEKTQENSTALDAKKAAVAAAIARAKAKKLAQANSTSEAISNAQTAENEVEKTKSAVEKTQENSTALDPKKAAVAAAIARAKTKKLAKTQATLENNQE
>CP031683.1|AXP77970.1|1212432_1213014_-|electron-transport-complex-subunit-B
MTFLFIVITLLALIFGAILGFASIKLKVEADPVVEKIDAILPQSQCGQCGYPGCKPYAEAICNGDEITKCIPGGQTTIVKIAEILGVDVPTMEGIEEPIEKVAFIDENMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCILMIPVKKNIDNWDWKFDAKLVIPVMNVDGSEKKLVVGE
>CP031683.1|AXP77971.1|1213101_1213680_-|electron-transport-complex-subunit-A
MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVDHYILIPLNATFLRTLVFILVIAVVVQFTEMAINKTSPTLYRLLGIFLPLITTNCAVLGVALLNINLAHNLTESVVYGFGASLGFSLVLVLFAALRERLVAADIPATFRGSSIALITAGLMSLAFMGFTGLVK
>CP031683.1|AXP77972.1|1214027_1215089_-|protease-SohB
MLNDILTGYGIFILEILTILLLILAIVGLIISYRQHNKSKTGELEIKDLSEEFNEQVRLLRDFNLSEEEQKQRTKAEKKAEKQKAKKRKEKLKKGDTLEDEKKACVYVLDFCGDISASETTALRKEISAILNVAKSEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNRPCLDIDKIATGEHWFGQQAIELQLVDEISTSDDLILEKMKEKQVLNVKYRLKKSLIKKFGRQAEESAINIIHRYSAKQSKDFMY
>CP031683.1|AXP77973.1|1215288_1215954_+|DUF2057-domain-containing-protein
MKLRAVVLGLATLCASTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQSHQVVVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPVIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAAASVSAFAATTSANSMVAAPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLKWAKSHK
>CP031683.1|AXP77974.1|1216021_1218178_+|TIGR01666-family-membrane-protein
MNIRLNTKVISTIPVFIAVNIAAVGIWFFDISSQSMPLILGIIAGGLVDLDNRLTGRLKNVFFTLIAFSISSFIVQLHIGKPIQYIVLMTVLTFIFTMIGAVGQRYSTIAFGSLVVALYTTLTYIPEVNVWFINPVMILCGTLLYSVVTLIVYLFFPNRPVQESVAKAFCALGEYLDTKSCFFDPDEVAEIEKKHLNFAMKNANVVTAFNIVRTALFYRIRGQHRHPRTQRMLRYYFAAQDIHERTNSTHFDYQQITEKLKNTDLIFRIQRLLELQAQSCKEITASLRENKPYHFNERVERALLGTLHSFELYRAQHLNDQDELIDIQTLLDNLQSINWQLRQLAQDTTDTEQLAQIHTEQITGLKNISAVIFSHFTFESPLFRHAVRLSIVVFLCCAIVEFFQFNLGYWILLTTVFVCQPNYSATKVRLRQRIIGTILGVVVGSLLPYLNPTLELKLGLVVLTSTLFFFFRSNNYSFSTFFITLQVLLSFDVMGFDTAAALMPRLLDTLLGAAISWFAVSYLWPDWKYLQLDKVSHQALRSDAVYLLHIISQLQFGKSDDLKYRIARRNAHQYAAALSTTLSNMNNEPVKYKTYLQKGFDLLKLNYSLLSYISALGAYRDRMKNLQQTAQFLSGFYPVAKKIIYTLEHIEEIPEAIFNQQQERIETHLKELEKQEMTAEERTVFSLPYQQLNLITQLLPQFYGYFKKEINCQRAGAL
>CP031683.1|AXP77975.1|1218255_1220208_-|adhesin
MTKENLQSAPQNTTSSLVESNNDQTSPQILKQPPKPNLLRLEQHVAKKDYELACRELMAILEKMDANFGDVHDIEFDAPAQLAYLPEKLLIHFATRLANAITTLFSDPELAISEEGALKMISLQRWLTLIFASSPYVNADHILNKYNINPDSEGGFHLATDNSSIAKFCIFYLPESNINMSLDALWAGNQQLCASLCFALQSSRFIGTASAFHKRAVVLQWFPKKLAEIADLNELPANILHDVYMHCSYDLAKNKHDVKRPLNELVRKHILTQGWQDRYLYTLGKKDGKPVMMVLLEHFNSGHSIYRTHSTSMIAAREKFYLVGLGSESVDEIGREVFDEFFEISSNNIMERLFFIRKQCETFQPAVFYMPSIGMDITTIFVSNTRLAPIQAVALGHPATTHSEFIDYVIVEDDYVGSEDCFSETLLRLPKDALPYVPSALAPQKVDYVLRENPEVVNIGIAATTMKLNPEFLVTLQEIRDKAKVKMHFHFALGQSTGLTHPYVKWFIESYLGDDATAHPHAPYHDYLAILRDCDMLLNPFPFGNTNGIIDMVTLGLIGVCKTGDEVHEHIDEGLFKRLGLPEWLIADTRETYIECALRLAENHQERLELRRYIIENNGLQKLFTGDPRPLGKILLKKTNEWKRKHLSKK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

646397 : 709287

Mannheimia_phage(11.36%)

tail,portal,protease,tRNA,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP77455.1\|646397_647108_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AXP77456.1\|647120_649043_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	3.3e-98	33.1
AXP77457.1\|649368_649779_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
AXP77458.1\|649795_650482_+	protein TolQ	NA	NA	NA	NA
AXP77459.1\|650553_650973_+	protein TolR	NA	NA	NA	NA
AXP77460.1\|650988_652179_+	cell envelope integrity protein TolA	NA	NA	NA	NA
AXP77461.1\|652220_653504_+	Tol-Pal system protein TolB	NA	NA	NA	NA
AXP77462.1\|653527_653989_+	outer membrane protein P6	NA	NA	NA	NA
AXP77463.1\|655345_655660_-	DNA-binding protein	NA	NA	NA	NA
AXP77464.1\|655804_656242_-	hypothetical protein	A0A2K9V3W6	Faecalibacterium_phage	2.0e-24	37.6
AXP77465.1\|656245_656515_-	hypothetical protein	NA	NA	NA	NA
AXP77466.1\|656779_657268_-	hypothetical protein	NA	NA	NA	NA
AXP77467.1\|657316_658480_-	DNA (cytosine-5-)-methyltransferase	A0A2I7RFJ9	Vibrio_phage	7.5e-90	46.4
AXP77468.1\|658487_658847_-	hypothetical protein	NA	NA	NA	NA
AXP77469.1\|658843_659089_-	hypothetical protein	NA	NA	NA	NA
AXP77470.1\|659085_659982_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.4e-56	44.0
AXP77471.1\|660106_661075_-	hypothetical protein	A0A0U3TGV3	Pseudomonas_phage	2.4e-33	58.2
AXP77472.1\|661136_661571_-	single-stranded DNA-binding protein	A0A059WRL7	Vibrio_phage	7.5e-19	36.2
AXP77473.1\|661570_662221_-	translocation protein TolB precursor	A0A0M3LP90	Mannheimia_phage	2.5e-82	69.3
AXP77474.1\|662195_663116_-	recombinase	A0A0M3LNU3	Mannheimia_phage	4.8e-116	71.5
AXP77475.1\|663128_663422_-	hypothetical protein	NA	NA	NA	NA
AXP77476.1\|663418_663763_-	hypothetical protein	NA	NA	NA	NA
AXP77477.1\|663776_664514_-	site-specific DNA-methyltransferase	A0A0E3U2R2	Fusobacterium_phage	4.0e-113	77.5
AXP77478.1\|664604_665636_-	endonuclease	D0UIK6	Aggregatibacter_phage	5.2e-42	82.8
AXP77479.1\|665625_665877_-	hypothetical protein	NA	NA	NA	NA
AXP77480.1\|665860_666040_+	hypothetical protein	NA	NA	NA	NA
AXP77481.1\|666008_666326_-	hypothetical protein	NA	NA	NA	NA
AXP77482.1\|666493_666715_-	hypothetical protein	NA	NA	NA	NA
AXP77483.1\|666729_666900_+	DUF1508 domain-containing protein	NA	NA	NA	NA
AXP77484.1\|667455_668376_-	DUF3800 domain-containing protein	A5X9G9	Aeromonas_virus	5.1e-57	43.7
AXP77485.1\|668578_669280_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	1.9e-24	33.6
AXP77486.1\|669428_669644_+	helix-turn-helix domain-containing protein	Q19UN8	Mannheimia_phage	1.2e-09	52.9
AXP77487.1\|669717_670425_+	hypothetical protein	Q7Y5W2	Haemophilus_phage	2.4e-46	52.6
AXP77488.1\|670421_671180_+	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	1.6e-61	67.3
AXP77489.1\|671164_671800_+	replication P	A0A1P8DTF3	Proteus_phage	2.7e-17	33.8
AXP77490.1\|671796_672021_+	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.0e-11	49.3
AXP77491.1\|672057_672474_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	9.6e-64	85.4
AXP77492.1\|672566_673112_+	recombination protein NinG	D0UIK8	Aggregatibacter_phage	1.3e-60	66.3
AXP77493.1\|673112_673622_+	antitermination protein	A0A077KC63	Edwardsiella_phage	3.5e-15	35.6
AXP77494.1\|673879_674131_+	hypothetical protein	NA	NA	NA	NA
AXP77495.1\|674111_674654_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.0e-46	51.4
AXP77496.1\|674626_674962_+	DUF2570 domain-containing protein	Q7Y5U9	Haemophilus_phage	1.9e-17	50.0
AXP77497.1\|674873_675155_+	hypothetical protein	Q776X1	Haemophilus_phage	1.6e-30	73.3
AXP77498.1\|675425_675899_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.9e-39	53.0
AXP77499.1\|675901_678022_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	1.5e-277	67.1
AXP77500.1\|678018_678237_+	hypothetical protein	NA	NA	NA	NA
AXP77501.1\|678240_679764_+\|portal	phage portal protein	S5MW34	Escherichia_phage	2.9e-158	57.9
AXP78600.1\|679714_681742_+\|protease	Clp protease ClpP	A0A1W6JT88	Pseudomonas_phage	1.7e-198	56.1
AXP77502.1\|681820_682144_+	DUF2190 family protein	NA	NA	NA	NA
AXP77503.1\|682124_682436_+	hypothetical protein	NA	NA	NA	NA
AXP77504.1\|682438_682969_+\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	2.7e-18	50.0
AXP77505.1\|682977_683388_+\|tail	phage tail protein	NA	NA	NA	NA
AXP77506.1\|683390_684041_+	hypothetical protein	NA	NA	NA	NA
AXP77507.1\|684315_684723_+	hypothetical protein	NA	NA	NA	NA
AXP77508.1\|684767_684992_+	DUF4035 domain-containing protein	NA	NA	NA	NA
AXP77509.1\|685060_685444_+	diaminopimelate decarboxylase	NA	NA	NA	NA
AXP77510.1\|685427_685730_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXP78601.1\|685745_685982_+	hypothetical protein	NA	NA	NA	NA
AXP77511.1\|686033_689426_+\|tail	phage tail tape measure protein	A0A2P1CKJ3	Pantoea_phage	3.5e-39	24.0
AXP77512.1\|689434_689767_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	2.7e-16	38.5
AXP77513.1\|690276_691428_+	type I restriction endonuclease subunit R	A0A1S5SAB0	Streptococcus_phage	6.8e-35	30.1
AXP77514.1\|691737_692628_+	hypothetical protein	D0UIK6	Aggregatibacter_phage	6.1e-84	56.5
AXP77515.1\|693044_693563_+	hypothetical protein	G0ZNF0	Cronobacter_phage	1.3e-30	49.2
AXP77516.1\|693606_694257_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	3.3e-34	39.6
AXP77517.1\|694258_694966_+	hypothetical protein	A0A1B1IV85	uncultured_Mediterranean_phage	4.4e-53	43.2
AXP77518.1\|694904_695624_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	6.1e-34	40.2
AXP77519.1\|695627_699266_+\|tail	phage tail protein	A0A0R6PIC9	Moraxella_phage	1.7e-143	37.4
AXP78602.1\|699462_701085_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	3.1e-211	64.6
AXP77520.1\|701096_701699_+	hypothetical protein	Q94MX9	Haemophilus_virus	3.3e-97	93.5
AXP77521.1\|701695_702154_+	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	4.4e-46	57.1
AXP77522.1\|702802_703528_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
AXP77523.1\|704100_705315_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	1.1e-32	36.0
AXP77524.1\|705338_705755_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	2.0e-53	80.6
AXP77525.1\|705812_706136_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	4.4e-24	46.7
AXP77526.1\|706148_706673_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
AXP77527.1\|706723_707410_+	DUF2625 domain-containing protein	NA	NA	NA	NA
AXP77528.1\|707427_709287_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.6e-110	43.2

DBSCAN-SWA_2

971885 : 1075105

Burkholderia_virus(16.33%)

tail,plate,head,tRNA,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP77767.1\|971885_972671_-\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	A0A291ATS8	Pandoravirus	1.5e-17	28.9
AXP77768.1\|972655_973765_-	murein transglycosylase A	NA	NA	NA	NA
AXP77769.1\|974159_976295_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	W6LLI2	Streptococcus_phage	9.7e-19	29.9
AXP77770.1\|983117_985361_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
AXP77771.1\|985721_986351_-	glutathione S-transferase family protein	NA	NA	NA	NA
AXP77772.1\|986685_987975_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.5e-94	51.8
AXP77773.1\|988141_988483_+	hypothetical protein	NA	NA	NA	NA
AXP77774.1\|988572_989052_-	threonine/serine exporter	NA	NA	NA	NA
AXP77775.1\|989053_989824_-	threonine/serine exporter ThrE family protein	NA	NA	NA	NA
AXP77776.1\|989952_991215_-	HlyC/CorC family transporter	NA	NA	NA	NA
AXP77777.1\|991495_992884_+	signal recognition particle protein	NA	NA	NA	NA
AXP77778.1\|996227_997478_-	restriction endonuclease subunit S	NA	NA	NA	NA
AXP77779.1\|999314_999815_-	ci repressor-like protein	A0A0M3LPN5	Mannheimia_phage	6.4e-14	44.0
AXP77780.1\|1000025_1000253_+	transcriptional regulator	A0A0M3LPY8	Mannheimia_phage	2.1e-20	69.0
AXP77781.1\|1000263_1002273_+\|transposase	transposase	A0A0C4UR24	Shigella_phage	5.1e-102	37.7
AXP77782.1\|1002299_1003217_+	helix-turn-helix domain-containing protein	A0A2I7S9C3	Vibrio_phage	2.5e-56	39.6
AXP77783.1\|1003216_1003420_+	hypothetical protein	NA	NA	NA	NA
AXP77784.1\|1003441_1003960_+	host-nuclease inhibitor protein Gam	F6MIJ0	Haemophilus_phage	1.0e-43	55.2
AXP77785.1\|1004064_1004262_+	ANR family transcriptional regulator	NA	NA	NA	NA
AXP77786.1\|1004439_1004634_+	hypothetical protein	NA	NA	NA	NA
AXP77787.1\|1004715_1005684_+	hypothetical protein	NA	NA	NA	NA
AXP77788.1\|1005792_1006281_+	regulatory protein GemA	A0A0C4UQU3	Shigella_phage	4.8e-14	31.7
AXP78607.1\|1006284_1006659_+	transcriptional regulator	Q6QIE8	Burkholderia_phage	1.9e-23	46.2
AXP77789.1\|1006732_1007152_+	hypothetical protein	NA	NA	NA	NA
AXP77790.1\|1007238_1007775_+	N-acetylmuramoyl-L-alanine amidase	F6MIJ9	Haemophilus_phage	7.2e-72	68.0
AXP77791.1\|1008014_1008245_+	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	3.3e-18	70.7
AXP77792.1\|1008241_1008499_+	DUF2681 domain-containing protein	NA	NA	NA	NA
AXP77793.1\|1008622_1008931_+	hypothetical protein	Q6QIC4	Burkholderia_phage	6.3e-12	39.4
AXP77794.1\|1008927_1009230_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	3.1e-24	52.0
AXP77795.1\|1009239_1009788_+	DUF3486 family protein	Q6QIC2	Burkholderia_phage	5.9e-29	40.3
AXP77796.1\|1009771_1011094_+\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	1.8e-148	64.2
AXP77797.1\|1011095_1012511_+	DUF935 family protein	Q6QIC0	Burkholderia_phage	5.9e-113	45.4
AXP77798.1\|1012511_1013789_+\|head	phage head morphogenesis protein	J9STS2	Pseudomonas_phage	7.3e-54	47.6
AXP77799.1\|1013975_1014164_+	hypothetical protein	NA	NA	NA	NA
AXP77800.1\|1014366_1014867_+	phage virion morphogenesis protein	Q5ZQY1	Pseudomonas_phage	4.3e-18	34.6
AXP77801.1\|1015109_1016213_+	peptidase	A4JWJ9	Burkholderia_virus	5.5e-66	39.5
AXP77802.1\|1016231_1017158_+	hypothetical protein	A4JWK0	Burkholderia_virus	1.3e-73	47.9
AXP77803.1\|1017223_1017595_+	hypothetical protein	NA	NA	NA	NA
AXP77804.1\|1017594_1018029_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	4.4e-19	36.4
AXP77805.1\|1018040_1018538_+	hypothetical protein	NA	NA	NA	NA
AXP77806.1\|1018547_1019933_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	5.2e-98	44.3
AXP77807.1\|1019943_1020462_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	1.2e-36	44.4
AXP77808.1\|1020555_1020831_+\|tail	phage tail assembly protein	A0A1B2LRV6	Wolbachia_phage	1.0e-05	36.8
AXP77809.1\|1020851_1020992_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
AXP77810.1\|1021007_1021241_-	hypothetical protein	NA	NA	NA	NA
AXP77811.1\|1021277_1023626_+\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	3.7e-72	40.3
AXP77812.1\|1023625_1024558_+	hypothetical protein	A4JWL1	Burkholderia_virus	1.6e-18	29.9
AXP77813.1\|1024538_1024769_+	hypothetical protein	Q6QIA3	Burkholderia_phage	3.6e-12	46.3
AXP77814.1\|1024761_1025826_+	hypothetical protein	A4JWL3	Burkholderia_virus	2.5e-60	38.3
AXP77815.1\|1025812_1026421_+\|plate	phage baseplate assembly protein V	R9U0U6	Rhizobium_phage	5.2e-10	30.9
AXP77816.1\|1026475_1026841_+\|plate	phage baseplate protein	Q6QIA0	Burkholderia_phage	4.7e-14	42.5
AXP77817.1\|1026840_1027947_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	5.9e-60	37.8
AXP77818.1\|1027939_1028509_+\|tail	phage tail protein	A4JWL7	Burkholderia_virus	4.5e-40	45.3
AXP77819.1\|1028540_1030250_+\|tail	phage tail protein	Q94MY0	Haemophilus_virus	1.0e-159	67.8
AXP77820.1\|1030261_1030864_+	hypothetical protein	Q94MX9	Haemophilus_virus	2.6e-94	91.0
AXP77821.1\|1030930_1031362_+	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	1.4e-49	65.5
AXP77822.1\|1031537_1031657_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
AXP77823.1\|1031713_1032559_+	hypothetical protein	F6MIM2	Haemophilus_phage	1.6e-118	71.7
AXP77824.1\|1032598_1032862_-	hypothetical protein	F6MIM3	Haemophilus_phage	6.1e-32	76.7
AXP77825.1\|1033458_1035831_-	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	1.2e-22	28.8
AXP77826.1\|1036006_1036762_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
AXP77827.1\|1037055_1038951_+	molecular chaperone HtpG	A0A1B1ISV4	uncultured_Mediterranean_phage	7.6e-116	36.7
AXP77828.1\|1039029_1039374_+	ArsC family reductase	NA	NA	NA	NA
AXP77829.1\|1039401_1040535_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
AXP77830.1\|1040536_1041217_+	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA
AXP78608.1\|1041251_1042307_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.0e-26	29.1
AXP77831.1\|1042308_1043829_-	iron ABC transporter permease	NA	NA	NA	NA
AXP77832.1\|1043946_1044945_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA
AXP78609.1\|1045096_1046575_-	methyltransferase domain-containing protein	NA	NA	NA	NA
AXP77833.1\|1046862_1047564_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
AXP77834.1\|1047873_1050321_+	bifunctional aspartate kinase/homoserine dehydrogenase I	NA	NA	NA	NA
AXP77835.1\|1050333_1051278_+	homoserine kinase	NA	NA	NA	NA
AXP77836.1\|1051320_1052598_+	threonine synthase	NA	NA	NA	NA
AXP78610.1\|1053427_1054573_+	methionine biosynthesis PLP-dependent protein	A0A141ZJM2	Faustovirus	2.1e-12	26.5
AXP77837.1\|1054585_1055581_+	2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	4.9e-66	39.6
AXP77838.1\|1055700_1056024_+	thioredoxin	A0A1J0GW78	Streptomyces_phage	9.8e-16	42.4
AXP77839.1\|1055979_1056219_-	hypothetical protein	NA	NA	NA	NA
AXP77840.1\|1056437_1057226_-	TatD family deoxyribonuclease	NA	NA	NA	NA
AXP77841.1\|1057367_1057799_-	hypothetical protein	NA	NA	NA	NA
AXP77842.1\|1057802_1058312_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	5.5e-13	32.9
AXP77843.1\|1058414_1059794_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	6.6e-53	29.7
AXP77844.1\|1059954_1060815_-	acyl-CoA thioesterase II	NA	NA	NA	NA
AXP77845.1\|1060933_1063057_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	2.8e-260	62.7
AXP77846.1\|1063338_1063779_+	hypothetical protein	NA	NA	NA	NA
AXP77847.1\|1063771_1064116_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
AXP77848.1\|1064128_1064755_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXP78611.1\|1064825_1065716_+	NAD(+) kinase	NA	NA	NA	NA
AXP77849.1\|1065828_1067505_+	DNA repair protein RecN	NA	NA	NA	NA
AXP77850.1\|1067526_1070472_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
AXP77851.1\|1070477_1071413_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
AXP77852.1\|1071420_1073322_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.3e-69	32.0
AXP77853.1\|1073322_1074621_-	LysM peptidoglycan-binding domain-containing protein	A0A0N6W8I1	Bacillus_phage	2.2e-13	24.2
AXP77854.1\|1074628_1075105_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA

DBSCAN-SWA_3

1304389 : 1395380

Mannheimia_phage(37.5%)

tail,capsid,lysis,plate,head,protease,tRNA,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP78039.1\|1304389_1306360_+\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
AXP78040.1\|1306631_1310072_+	transcription-repair coupling factor	NA	NA	NA	NA
AXP78041.1\|1310124_1311516_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	31.2
AXP78042.1\|1311709_1312600_+	acetyl-CoA carboxylase carboxyl transferase subunit beta	NA	NA	NA	NA
AXP78043.1\|1312592_1313906_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
AXP78044.1\|1314193_1314874_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
AXP78045.1\|1315031_1316108_+	homoserine O-acetyltransferase	NA	NA	NA	NA
AXP78046.1\|1316162_1318805_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.1e-103	32.3
AXP78047.1\|1319339_1321103_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
AXP78048.1\|1321239_1321587_-	hypothetical protein	NA	NA	NA	NA
AXP78049.1\|1321574_1322141_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXP78050.1\|1322137_1323154_+	iron ABC transporter permease	NA	NA	NA	NA
AXP78051.1\|1323912_1324719_+	SAM-dependent methyltransferase	NA	NA	NA	NA
AXP78052.1\|1324770_1325487_+	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	3.7e-07	27.9
AXP78053.1\|1325539_1326400_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
AXP78054.1\|1326512_1328561_-\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	2.2e-60	29.3
AXP78055.1\|1328711_1329824_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
AXP78056.1\|1329870_1330533_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AXP78057.1\|1330637_1331321_+	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
AXP78058.1\|1331214_1331529_-	hypothetical protein	NA	NA	NA	NA
AXP78059.1\|1333049_1334831_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	5.0e-218	65.4
AXP78060.1\|1334995_1335811_+\|capsid	capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	6.9e-66	60.5
AXP78061.1\|1335831_1336881_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	4.4e-89	51.6
AXP78062.1\|1336892_1337543_+\|terminase	terminase	Q19US0	Mannheimia_phage	4.1e-45	46.0
AXP78063.1\|1337836_1338343_+\|head	phage head protein	A0A0M3LNL8	Mannheimia_phage	2.8e-33	51.0
AXP78064.1\|1338342_1338552_+\|tail	phage tail protein	NA	NA	NA	NA
AXP78065.1\|1338553_1338775_+\|lysis	lysis protein	NA	NA	NA	NA
AXP78066.1\|1338767_1339286_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.5e-37	46.6
AXP78067.1\|1339270_1339621_+	chemotaxis protein	NA	NA	NA	NA
AXP78068.1\|1339535_1339799_+	hypothetical protein	NA	NA	NA	NA
AXP78069.1\|1339795_1340011_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.1e-10	47.9
AXP78070.1\|1340235_1340706_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	7.3e-28	45.3
AXP78071.1\|1340705_1341167_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	5.7e-25	48.2
AXP78072.1\|1341167_1341515_-	hypothetical protein	NA	NA	NA	NA
AXP78073.1\|1341618_1341801_+	hypothetical protein	Q19UR2	Mannheimia_phage	8.8e-06	47.8
AXP78074.1\|1341811_1342123_-	hypothetical protein	NA	NA	NA	NA
AXP78075.1\|1342225_1342399_+	hypothetical protein	Q19UR2	Mannheimia_phage	3.2e-05	53.3
AXP78076.1\|1342376_1342637_-	hypothetical protein	NA	NA	NA	NA
AXP78077.1\|1345701_1346154_+	hypothetical protein	NA	NA	NA	NA
AXP78078.1\|1346251_1346809_+	hypothetical protein	NA	NA	NA	NA
AXP78079.1\|1346817_1347246_+	hypothetical protein	NA	NA	NA	NA
AXP78080.1\|1347349_1347949_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.2e-44	66.0
AXP78081.1\|1347950_1348289_+\|plate	baseplate assembly protein W	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
AXP78082.1\|1348285_1349200_+\|plate	baseplate assembly protein	Q19UQ5	Mannheimia_phage	1.3e-92	58.6
AXP78083.1\|1349186_1349726_+\|tail	phage tail protein I	M1T2R2	Escherichia_phage	9.2e-51	53.4
AXP78084.1\|1349734_1352257_+\|tail	phage tail protein	Q94MY0	Haemophilus_virus	2.9e-256	69.4
AXP78085.1\|1352268_1352871_+	hypothetical protein	Q94MX9	Haemophilus_virus	2.6e-94	91.0
AXP78086.1\|1352937_1353372_+	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	1.2e-48	66.4
AXP78087.1\|1353428_1354250_+	hypothetical protein	NA	NA	NA	NA
AXP78088.1\|1354263_1354632_+	hypothetical protein	NA	NA	NA	NA
AXP78618.1\|1354648_1355788_+	hypothetical protein	NA	NA	NA	NA
AXP78089.1\|1355797_1356325_+	hypothetical protein	NA	NA	NA	NA
AXP78090.1\|1356328_1357093_+	hypothetical protein	NA	NA	NA	NA
AXP78091.1\|1358753_1359209_+	ribosome maturation factor RimP	NA	NA	NA	NA
AXP78092.1\|1359225_1360713_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
AXP78093.1\|1360724_1363214_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.5e-28	26.0
AXP78094.1\|1363292_1366460_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	9.5e-79	27.1
AXP78095.1\|1366463_1367096_-	hypothetical protein	NA	NA	NA	NA
AXP78096.1\|1367092_1368409_-	restriction endonuclease subunit S	NA	NA	NA	NA
AXP78097.1\|1368401_1370078_-	SAM-dependent DNA methyltransferase	A0A2H4PQP4	Staphylococcus_phage	4.1e-49	30.1
AXP78098.1\|1370242_1370629_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
AXP78099.1\|1370628_1371549_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
AXP78100.1\|1371628_1372762_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXP78101.1\|1372794_1373634_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	1.0e-40	39.3
AXP78102.1\|1373677_1374475_-	hypothetical protein	NA	NA	NA	NA
AXP78103.1\|1374465_1374846_-	hypothetical protein	NA	NA	NA	NA
AXP78104.1\|1374842_1376042_-	cysteine desulfurase	Q2XUY6	environmental_halophage	2.0e-61	32.0
AXP78619.1\|1376043_1376505_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	6.9e-31	47.0
AXP78105.1\|1376640_1377063_+	hypothetical protein	NA	NA	NA	NA
AXP78106.1\|1377081_1377777_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
AXP78107.1\|1377869_1379255_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
AXP78108.1\|1379348_1381292_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	1.6e-52	29.8
AXP78109.1\|1381372_1382512_-	extracellular solute-binding protein	NA	NA	NA	NA
AXP78110.1\|1382584_1383355_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
AXP78111.1\|1383354_1384215_-	spermidine/putrescine ABC transporter permease	Q6GZ02	Mycoplasma_phage	4.5e-15	28.2
AXP78112.1\|1384198_1385347_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	3.3e-29	36.6
AXP78113.1\|1387424_1387907_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
AXP78114.1\|1388180_1389059_+	cytidine deaminase	NA	NA	NA	NA
AXP78115.1\|1389102_1390068_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AXP78116.1\|1390064_1391579_-	sodium/proline symporter PutP	NA	NA	NA	NA
AXP78117.1\|1391694_1393170_+	ribonuclease G	NA	NA	NA	NA
AXP78118.1\|1393706_1395380_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	1.1e-254	76.7

DBSCAN-SWA_4

1442384 : 1454375

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP78620.1\|1442384_1443389_-	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5
AXP78149.1\|1443846_1444395_+	non-heme ferritin	NA	NA	NA	NA
AXP78150.1\|1444410_1444908_+	non-heme ferritin	NA	NA	NA	NA
AXP78151.1\|1445049_1445925_+	glycosyltransferase	A7IW34	Paramecium_bursaria_Chlorella_virus	2.9e-17	29.7
AXP78152.1\|1446026_1447583_+	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
AXP78153.1\|1447595_1448183_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-34	40.0
AXP78154.1\|1448231_1448618_+	tautomerase family protein	NA	NA	NA	NA
AXP78155.1\|1448670_1449672_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.3e-45	39.2
AXP78156.1\|1449709_1451143_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	1.2e-33	38.0
AXP78157.1\|1451204_1451477_+	hydrogenase maturation factor HybG	NA	NA	NA	NA
AXP78158.1\|1451510_1454375_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	2.3e-148	37.4

DBSCAN-SWA_5

1462445 : 1478677

Haemophilus_phage(42.86%)

head,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP78171.1\|1462445_1462622_-	DUF2213 domain-containing protein	Q7Y5U2	Haemophilus_phage	8.5e-22	93.1
AXP78172.1\|1462762_1464073_-\|head	phage head morphogenesis protein	Q7Y5U5	Haemophilus_phage	5.3e-108	78.3
AXP78173.1\|1463972_1465307_-	DUF1073 domain-containing protein	Q7Y5U6	Haemophilus_phage	2.1e-213	84.2
AXP78621.1\|1465308_1466583_-\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	7.9e-125	55.0
AXP78174.1\|1466638_1467151_-\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	1.0e-19	39.2
AXP78175.1\|1467195_1467474_+	XRE family transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.5e-16	66.2
AXP78176.1\|1467475_1467757_-	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
AXP78177.1\|1467668_1467992_-	DUF2570 domain-containing protein	Q7Y5U9	Haemophilus_phage	7.8e-21	54.6
AXP78178.1\|1467984_1468587_-	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	3.7e-56	53.4
AXP78179.1\|1468555_1468912_-\|holin	phage holin, lambda family	NA	NA	NA	NA
AXP78180.1\|1469248_1469917_-	hypothetical protein	D0UIM5	Aggregatibacter_phage	6.7e-67	62.3
AXP78181.1\|1470274_1471240_+	hypothetical protein	Q8HA04	Enterobacteria_phage	1.2e-88	58.8
AXP78182.1\|1471289_1471661_-	hypothetical protein	NA	NA	NA	NA
AXP78183.1\|1471691_1472357_-	HNH endonuclease	A0A2I7QND8	Vibrio_phage	2.2e-38	42.8
AXP78184.1\|1472993_1473413_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.9e-56	75.4
AXP78185.1\|1473449_1473674_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
AXP78186.1\|1473670_1474291_-	replication P	A0A0M3LS65	Mannheimia_phage	1.9e-28	39.1
AXP78187.1\|1474287_1475010_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	2.0e-61	68.3
AXP78188.1\|1475006_1475675_-	hypothetical protein	D0UIL6	Aggregatibacter_phage	2.2e-54	51.7
AXP78189.1\|1475721_1476162_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.8e-12	30.3
AXP78190.1\|1476210_1476399_-	DNA-binding protein	Q7Y5W4	Haemophilus_phage	6.5e-28	93.5
AXP78191.1\|1476509_1477208_+	XRE family transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.4e-112	84.5
AXP78192.1\|1477259_1478339_+	hypothetical protein	NA	NA	NA	NA
AXP78193.1\|1478341_1478677_+	DUF4325 domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	8.1e-13	41.5

DBSCAN-SWA_6

1716868 : 1725382

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP78422.1\|1716868_1717552_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	3.0e-54	50.7
AXP78423.1\|1717544_1717970_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	1.3e-20	42.7
AXP78424.1\|1717970_1718606_+	7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	1.1e-15	30.3
AXP78425.1\|1719000_1719234_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA
AXP78426.1\|1719217_1721401_+	DNA helicase II	A7KV33	Bacillus_phage	2.3e-116	37.6
AXP78427.1\|1721520_1722492_+	ABC transporter permease subunit	NA	NA	NA	NA
AXP78428.1\|1722506_1723394_+	ABC transporter permease subunit	NA	NA	NA	NA
AXP78429.1\|1723403_1724396_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-14	30.8
AXP78430.1\|1724398_1725382_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-20	32.8

DBSCAN-SWA_7

1852333 : 1861401

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXP78549.1\|1852333_1854178_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	5.6e-23	29.9
AXP78550.1\|1854301_1854580_-	copper chaperone	NA	NA	NA	NA
AXP78632.1\|1854588_1854906_-	hypothetical protein	NA	NA	NA	NA
AXP78551.1\|1854925_1856035_-	transglutaminase family protein	NA	NA	NA	NA
AXP78552.1\|1856288_1858709_+	twin-arginine translocation signal domain-containing protein	A0A077SK27	Escherichia_phage	2.6e-222	50.2
AXP78553.1\|1858719_1859337_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.9e-72	56.8
AXP78554.1\|1859338_1860178_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	4.2e-18	31.5
AXP78555.1\|1860289_1860901_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	1.3e-21	32.5
AXP78556.1\|1860900_1861401_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	3.2e-13	32.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage