Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031673 Staphylococcus aureus strain MOZ66 chromosome, complete genome 10 crisprs csa3,DEDDh,cas3,DinG 10 3 10 4

Results visualization

1. CP031673
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_1 578170-578250 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_2 702275-702365 Orphan NA
1 spacers
csa3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_3 831323-831412 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_4 959210-959288 Orphan NA
1 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_5 1810827-1811013 Orphan NA
3 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_6 1814851-1815107 Orphan NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_7 2077910-2077991 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_8 2126405-2126485 Unclear NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_9 2283453-2283545 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031673_10 2526961-2527062 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 116830-116866 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 957780-957816 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 1514375-1514411 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 1602632-1602668 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 2120993-2121029 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 2167513-2167549 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 2168483-2168519 0 1.0
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 2284471-2284507 0 1.0
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 1602690-1602726 0 1.0
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 1911820-1911856 0 1.0
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 2565621-2565657 0 1.0
CP031673_7 7.1|2077934|34|CP031673|CRISPRCasFinder 2077934-2077967 34 CP031673.1 1514358-1514391 0 1.0
CP031673_7 7.1|2077934|34|CP031673|CRISPRCasFinder 2077934-2077967 34 CP031673.1 1602652-1602685 0 1.0
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 2803593-2803621 0 1.0
CP031673_4 4.1|959233|33|CP031673|CRISPRCasFinder 959233-959265 33 CP031673.1 1335863-1335895 1 0.97
CP031673_4 4.1|959233|33|CP031673|CRISPRCasFinder 959233-959265 33 CP031673.1 1602698-1602730 1 0.97
CP031673_4 4.1|959233|33|CP031673|CRISPRCasFinder 959233-959265 33 CP031673.1 2637075-2637107 1 0.97
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 411766-411802 1 0.973
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 1885497-1885533 1 0.973
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 1335867-1335903 1 0.973
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 1514317-1514353 1 0.973
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 2637067-2637103 1 0.973
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 1157205-1157241 1 0.973
CP031673_6 6.2|1814934|30|CP031673|CRISPRCasFinder 1814934-1814963 30 CP031673.1 1815103-1815132 1 0.967
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 1157210-1157238 1 0.966
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 2565512-2565540 1 0.966
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 1602696-1602726 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 1810796-1810826 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 1911820-1911850 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 2121049-2121079 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 2565627-2565657 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 2637073-2637103 2 0.935
CP031673_1 1.1|578195|31|CP031673|CRISPRCasFinder 578195-578225 31 CP031673.1 2803539-2803569 2 0.935
CP031673_4 4.1|959233|33|CP031673|CRISPRCasFinder 959233-959265 33 CP031673.1 1514313-1514345 2 0.939
CP031673_5 5.1|1810846|37|CP031673|CRT 1810846-1810882 37 CP031673.1 1814814-1814850 2 0.946
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 1810790-1810826 2 0.946
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 2121049-2121085 2 0.946
CP031673_5 5.2|1810902|37|CP031673|CRT 1810902-1810938 37 CP031673.1 2803533-2803569 2 0.946
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 386482-386518 2 0.946
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 948490-948526 2 0.946
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 1335925-1335961 2 0.946
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 2077894-2077930 2 0.946
CP031673_5 5.3|1810958|37|CP031673|CRT 1810958-1810994 37 CP031673.1 2803588-2803624 2 0.946
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 1602698-1602726 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 1810798-1810826 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 1911820-1911848 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 2121049-2121077 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 2565629-2565657 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 2637075-2637103 2 0.931
CP031673_6 6.1|1814878|29|CP031673|CRISPRCasFinder 1814878-1814906 29 CP031673.1 2803541-2803569 2 0.931
CP031673_6 6.6|1815052|37|CP031673|CRT 1815052-1815088 37 CP031673.1 824094-824130 2 0.946
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 386487-386515 2 0.931
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 948493-948521 2 0.931
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 1335928-1335956 2 0.931
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 2009553-2009581 2 0.931
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 CP031673.1 2077897-2077925 2 0.931

1. spacer 5.1|1810846|37|CP031673|CRT matches to position: 116830-116866, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

2. spacer 5.1|1810846|37|CP031673|CRT matches to position: 957780-957816, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

3. spacer 5.1|1810846|37|CP031673|CRT matches to position: 1514375-1514411, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

4. spacer 5.1|1810846|37|CP031673|CRT matches to position: 1602632-1602668, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

5. spacer 5.1|1810846|37|CP031673|CRT matches to position: 2120993-2121029, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

6. spacer 5.1|1810846|37|CP031673|CRT matches to position: 2167513-2167549, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

7. spacer 5.1|1810846|37|CP031673|CRT matches to position: 2168483-2168519, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

8. spacer 5.1|1810846|37|CP031673|CRT matches to position: 2284471-2284507, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

9. spacer 5.2|1810902|37|CP031673|CRT matches to position: 1602690-1602726, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

10. spacer 5.2|1810902|37|CP031673|CRT matches to position: 1911820-1911856, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

11. spacer 5.2|1810902|37|CP031673|CRT matches to position: 2565621-2565657, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

12. spacer 7.1|2077934|34|CP031673|CRISPRCasFinder matches to position: 1514358-1514391, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

13. spacer 7.1|2077934|34|CP031673|CRISPRCasFinder matches to position: 1602652-1602685, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

14. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 2803593-2803621, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaaacaatgca	Protospacer
*****************************

15. spacer 4.1|959233|33|CP031673|CRISPRCasFinder matches to position: 1335863-1335895, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttactataatg	Protospacer
************************** ******

16. spacer 4.1|959233|33|CP031673|CRISPRCasFinder matches to position: 1602698-1602730, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

17. spacer 4.1|959233|33|CP031673|CRISPRCasFinder matches to position: 2637075-2637107, mismatch: 1, identity: 0.97

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
**************************.******

18. spacer 5.1|1810846|37|CP031673|CRT matches to position: 411766-411802, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctctagaaattgggaatccaatttc	Protospacer
************** **********************

19. spacer 5.1|1810846|37|CP031673|CRT matches to position: 1885497-1885533, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttacattgtctgtagaaattgggaatccaatttc	Protospacer
*****.*******************************

20. spacer 5.2|1810902|37|CP031673|CRT matches to position: 1335867-1335903, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattatagtaagctgacttttcgtcagct	Protospacer
************** **********************

21. spacer 5.2|1810902|37|CP031673|CRT matches to position: 1514317-1514353, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcatct	Protospacer
********************************** **

22. spacer 5.2|1810902|37|CP031673|CRT matches to position: 2637067-2637103, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aactcgcacattattgtaagctgacttttcgtcagct	Protospacer
****.********************************

23. spacer 5.3|1810958|37|CP031673|CRT matches to position: 1157205-1157241, mismatch: 1, identity: 0.973

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcttttcgaaattc	Protospacer
*****************************.*******

24. spacer 6.2|1814934|30|CP031673|CRISPRCasFinder matches to position: 1815103-1815132, mismatch: 1, identity: 0.967

attgtttgttggaattggtgatcctatttc	CRISPR spacer
attgtctgttggaattggtgatcctatttc	Protospacer
*****.************************

25. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 1157210-1157238, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

26. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 2565512-2565540, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaagcaatgca	Protospacer
*********************.*******

27. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 1602696-1602726, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
*******..**********************

28. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 1810796-1810826, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctggcggaaagtcagcttacaataatgtg	Protospacer
*****.*.***********************

29. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 1911820-1911850, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
*******..**********************

30. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 2121049-2121079, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctggcggaaagtcagcttacaataatgtg	Protospacer
*****.*.***********************

31. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 2565627-2565657, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
*******..**********************

32. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 2637073-2637103, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
*******..**********************

33. spacer 1.1|578195|31|CP031673|CRISPRCasFinder matches to position: 2803539-2803569, mismatch: 2, identity: 0.935

agctgacagaaagtcagcttacaataatgtg	CRISPR spacer
agctggcggaaagtcagcttacaataatgtg	Protospacer
*****.*.***********************

34. spacer 4.1|959233|33|CP031673|CRISPRCasFinder matches to position: 1514313-1514345, mismatch: 2, identity: 0.939

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
cagaagatgacgaaaagtcagcttacaataatg	Protospacer
****** *******************.******

35. spacer 5.1|1810846|37|CP031673|CRT matches to position: 1814814-1814850, mismatch: 2, identity: 0.946

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattggggttccaatttc	Protospacer
**************************. *********

36. spacer 5.2|1810902|37|CP031673|CRT matches to position: 1810790-1810826, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

37. spacer 5.2|1810902|37|CP031673|CRT matches to position: 2121049-2121085, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

38. spacer 5.2|1810902|37|CP031673|CRT matches to position: 2803533-2803569, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

39. spacer 5.3|1810958|37|CP031673|CRT matches to position: 386482-386518, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

40. spacer 5.3|1810958|37|CP031673|CRT matches to position: 948490-948526, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcctttcgaaattc	Protospacer
*************************.***.*******

41. spacer 5.3|1810958|37|CP031673|CRT matches to position: 1335925-1335961, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

42. spacer 5.3|1810958|37|CP031673|CRT matches to position: 2077894-2077930, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

43. spacer 5.3|1810958|37|CP031673|CRT matches to position: 2803588-2803624, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtttgtagaatttcttttcgaaattc	Protospacer
*************.***************.*******

44. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 1602698-1602726, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

45. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 1810798-1810826, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgactttccgccagct	Protospacer
**** ***************.********

46. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 1911820-1911848, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

47. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 2121049-2121077, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgactttccgccagct	Protospacer
**** ***************.********

48. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 2565629-2565657, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

49. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 2637075-2637103, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

50. spacer 6.1|1814878|29|CP031673|CRISPRCasFinder matches to position: 2803541-2803569, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgactttccgccagct	Protospacer
**** ***************.********

51. spacer 6.6|1815052|37|CP031673|CRT matches to position: 824094-824130, mismatch: 2, identity: 0.946

ctgttgaaattggtgatccaatttctctatgttgggg	CRISPR spacer
ctgtagaaattggtgttccaatttctctatgttgggg	Protospacer
**** ********** *********************

52. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 386487-386515, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

53. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 948493-948521, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaggaaattctacagacaatgca	Protospacer
********.***********.********

54. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 1335928-1335956, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

55. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 2009553-2009581, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

56. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to position: 2077897-2077925, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP031673_6 6.2|1814934|30|CP031673|CRISPRCasFinder 1814934-1814963 30 NZ_LR215032 Mycoplasma gallopavonis strain NCTC10186 plasmid 2 268766-268795 6 0.8
CP031673_6 6.2|1814934|30|CP031673|CRISPRCasFinder 1814934-1814963 30 MN856116 Myoviridae sp. isolate 525, complete genome 4992-5021 7 0.767
CP031673_8 8.1|2126431|29|CP031673|CRISPRCasFinder 2126431-2126459 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
CP031673_4 4.1|959233|33|CP031673|CRISPRCasFinder 959233-959265 33 NC_021536 Synechococcus phage S-IOM18 genomic sequence 159745-159777 10 0.697

1. spacer 6.2|1814934|30|CP031673|CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 6, identity: 0.8

-attgtttgttggaattggtgatcctatttc	CRISPR spacer
tactg-ttgttggaattggtggtccaattaa	Protospacer
 *.** ***************.*** ***  

2. spacer 6.2|1814934|30|CP031673|CRISPRCasFinder matches to MN856116 (Myoviridae sp. isolate 525, complete genome) position: , mismatch: 7, identity: 0.767

attgt-ttgttggaattggtgatcctatttc	CRISPR spacer
-tggcattgttggaattggttttcctattgt	Protospacer
 * *. **************  ******* .

3. spacer 8.1|2126431|29|CP031673|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
cacttagaagaaatcctacaaacaatgca	Protospacer
. .. *.*******.**************

4. spacer 4.1|959233|33|CP031673|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 10, identity: 0.697

cagaagctgacgaaaagtcagcttacgataatg	CRISPR spacer
aggtgcttgacgaaaactcaccttacgataaaa	Protospacer
 .* . .********* *** ********** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 827350 : 913095 120 Staphylococcus_phage(90.43%) holin,portal,coat,tail,capsid,terminase,head,protease,integrase,transposase attL 842294:842323|attR 892393:892422
DBSCAN-SWA_2 969239 : 1042186 87 Staphylococcus_phage(79.69%) holin,portal,tail,capsid,terminase,tRNA,head,integrase,transposase attL 965759:965776|attR 998731:998748
DBSCAN-SWA_3 1070708 : 1136292 71 Staphylococcus_phage(92.86%) bacteriocin,protease,transposase NA
DBSCAN-SWA_4 1139452 : 1152181 6 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_5 1277840 : 1286883 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_6 1356020 : 1364332 7 Caulobacter_phage(16.67%) tRNA NA
DBSCAN-SWA_7 1901869 : 1910342 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 2154850 : 2169637 18 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_9 2181609 : 2189429 10 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_10 2538939 : 2591596 60 Staphylococcus_phage(56.25%) transposase,bacteriocin,integrase attL 2535850:2535867|attR 2581916:2581933
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP031673.1|AXP53248.1|2577280_2577490_+|hypothetical-protein 2577280_2577490_+ 69 aa aa NA NA NA 2538939-2591596 yes
CP031673.1|AXP53249.1|2577603_2578104_-|recombinase 2577603_2578104_- 166 aa aa NA NA NA 2538939-2591596 yes
CP031673.1|AXP53259.1|2585417_2585630_+|hypothetical-protein 2585417_2585630_+ 70 aa aa NA NA NA 2538939-2591596 yes
CP031673.1|AXP53261.1|2586433_2586811_+|transposase 2586433_2586811_+ 125 aa aa NA NA NA 2538939-2591596 yes