CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031762	Pseudoalteromonas piscicida strain DE2-A chromosome 2, complete sequence	0 crisprs	DinG,cas3,csa3,DEDDh	0	0	0	0
CP031761	Pseudoalteromonas piscicida strain DE2-A chromosome 1, complete sequence	3 crisprs	DEDDh,cas3,csx1,DinG,WYL,csa3	3	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP031761_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031761_1

1670668-1670779

Orphan

Consensus_repeat	Method
AGATCGCTGCGTAAAGCAGCTCCCACTCCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031761_1

>merge|CP031761|1|1670668-1670779|CRISPRCasFinder
AGATCGCTGCGTAAAGCAGCTCCCACTCCGATGCAAAGCTGGTTATATCGGGTGGTGATGTTGTGTGGTAATGGCTTTTAGAGATCGCTGCGTAAAGCAGCTCCTACTCCGA

>CP031761|1|1|1670668-1670779|CRISPRCasFinder
AGATCGCTGCGTAAAGCAGCTCCCACTCCGA	TGCAAAGCTGGTTATATCGGGTGGTGATGTTGTGTGGTAATGGCTTTTAG
AGATCGCTGCGTAAAGCAGCTCCTACTCCGA

Protein	Signature genes	Signature genes Name	Protein_function
CP031761.1\|AXR01951.1\|1677398_1677710_+\|GTP-cyclohydrolase	unknown	unknown	gnl\|CDD\|225225
CP031761.1\|AXR01953.1\|1678340_1678802_+\|HPP-family-protein	unknown	unknown	gnl\|CDD\|377434
CP031761.1\|AXR01935.1\|1661130_1661661_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR01938.1\|1664374_1664719_-\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|377551
CP031761.1\|AXR01936.1\|1661731_1662259_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR01949.1\|1675932_1676811_+\|protoheme-IX-farnesyltransferase	unknown	unknown	gnl\|CDD\|184001
CP031761.1\|AXR01948.1\|1675559_1675919_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	unknown	unknown	gnl\|CDD\|131894
CP031761.1\|AXR01943.1\|1670165_1670621_+\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
CP031761.1\|AXR01934.1\|1659067_1661134_+\|DUF2235-domain-containing-protein	unknown	unknown	gnl\|CDD\|370774
CP031761.1\|AXR01950.1\|1677150_1677378_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR01945.1\|1672042_1672951_+\|ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|182518
CP031761.1\|AXR01952.1\|1677699_1678230_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
CP031761.1\|AXR01944.1\|1671297_1671729_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR01937.1\|1662806_1664294_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
CP031761.1\|AXR01947.1\|1674939_1675560_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|131889
CP031761.1\|AXR01941.1\|1667779_1669564_-\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
CP031761.1\|AXR01946.1\|1672953_1674936_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|131890
CP031761.1\|AXR01939.1\|1664715_1665018_-\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR01942.1\|1669577_1670084_-\|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|133385
CP031761.1\|AXR01940.1\|1665461_1667621_+\|S46-family-peptidase	unknown	unknown	gnl\|CDD\|371067

Protein	Function_ID	Function_description	E-value
CP031761.1\|AXR01951.1\|1677398_1677710_+\|GTP-cyclohydrolase	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	8.75889e-14
CP031761.1\|AXR01945.1\|1672042_1672951_+\|ubiquinol-oxidase-subunit-II	gnl\|CDD\|182518	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional.	2.12192e-147
CP031761.1\|AXR01938.1\|1664374_1664719_-\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	3.62396e-49
CP031761.1\|AXR01949.1\|1675932_1676811_+\|protoheme-IX-farnesyltransferase	gnl\|CDD\|184001	PRK13362, PRK13362, protoheme IX farnesyltransferase; Provisional.	1.15477e-151
CP031761.1\|AXR01948.1\|1675559_1675919_+\|cytochrome-o-ubiquinol-oxidase-subunit-IV	gnl\|CDD\|131894	TIGR02847, Cytochrome_bo3_ubiquinol_oxidase_subunit_4, cytochrome o ubiquinol oxidase subunit IV. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	1.13887e-33
CP031761.1\|AXR01943.1\|1670165_1670621_+\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	9.43654e-18
CP031761.1\|AXR01946.1\|1672953_1674936_+\|cytochrome-o-ubiquinol-oxidase-subunit-I	gnl\|CDD\|131890	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	0
CP031761.1\|AXR01953.1\|1678340_1678802_+\|HPP-family-protein	gnl\|CDD\|377434	pfam04982, HPP, HPP family. These proteins are integral membrane proteins with four transmembrane spanning helices. The most conserved region of the alignment is a motif HPP. The function of these proteins is uncertain but they may be transporters.	5.33643e-29
CP031761.1\|AXR01952.1\|1677699_1678230_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.65363e-14
CP031761.1\|AXR01947.1\|1674939_1675560_+\|cytochrome-o-ubiquinol-oxidase-subunit-III	gnl\|CDD\|131889	TIGR02842, Cytochrome_bo3_ubiquinol_oxidase_subunit_3, cytochrome o ubiquinol oxidase, subunit III. Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain which reacts with oxygen, reducing it to water with the concomitant transport of 4 protons across the membrane. Also known as the cytochrome bo complex, cytochrome o ubiquinol oxidase contains four subunits, two heme b cofactors and a copper atom which is believed to be the oxygen active site. This complex is structurally related to the cytochrome caa3 oxidases which utilize cytochrome c as the reductant and contain heme a cofactors, as well as the intermediate form aa3 oxidases which also react directly with quinones as the reductant. [Energy metabolism, Electron transport].	2.85126e-103
CP031761.1\|AXR01937.1\|1662806_1664294_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	7.65077e-126
CP031761.1\|AXR01941.1\|1667779_1669564_-\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	5.42651e-120
CP031761.1\|AXR01934.1\|1659067_1661134_+\|DUF2235-domain-containing-protein	gnl\|CDD\|370774	pfam09994, DUF2235, Uncharacterized alpha/beta hydrolase domain (DUF2235). This domain, found in various hypothetical bacterial proteins, has no known function.	1.13765e-25
CP031761.1\|AXR01942.1\|1669577_1670084_-\|redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	4.78228e-89
CP031761.1\|AXR01940.1\|1665461_1667621_+\|S46-family-peptidase	gnl\|CDD\|371067	pfam10459, Peptidase_S46, Peptidase S46. Dipeptidyl-peptidase 7 (DPP-7) is the best characterized member of this family. It is a serine peptidase that is located on the cell surface and is predicted to have two N-terminal transmembrane domains.	0

>CP031761.1|AXR01943.1|1670165_1670621_+|flavodoxin-family-protein
MKTVVIYSSSNPNGNTYQSAKALAEEKRAELIYLDRYKIGEYCYKHSHSDDDFVNLFRWVLGFEHIIFASPVYWYAVTPRMKAFIDRITDFMDIEALKPELRALREKQFSILSTSCQEKAPAPFTEMLVGTFEYLGMKLQEQRHVHYPYAD
>CP031761.1|AXR01942.1|1669577_1670084_-|redox-sensitive-transcriptional-activator-SoxR
MKTEKLLRDEPNLSVGKVAQRADVAVSALHFYENKGLIRSWRNNGNQRRYKKDVLRRIAIIKAGQKMGITLGEIKETLDTLPDSRTPTKADWAKLSRAWQTKLDEKIAYMQRLRDYVDGCIGCGCLSMKSCPIYNPDDIVAKEANGAVWLDEPDKANKAKSCYDSENH
>CP031761.1|AXR01941.1|1667779_1669564_-|DUF885-domain-containing-protein
MKKTALCMALAMAMGLTGCSLSPSSVETTPSASQQTVATNTQFADFSQQFINNLWKQYPEASLWAGFGKYDDIITVPTQATRDASVAFSRAQLAKLQQFDLANLSNSQKIDYHLIENRLKRDIWHIETFKSWQWNPSNYNVSYGFATILNSRFKTDDEKLKLVLARLQYVPAYYEAAQNNISNPTLEYTQLAIAQNQGAFSVLNDELLDKLATSLLTAEEKALFKQRFAAAKSAINGYVSYLTNLEKELSESGNARSFRIGEKLYEEKFAFDIQSGYTAKQMYEKAMADKTRVTNEMVKIVDQLWPKYFADKPRPESDIDAIATLIKHLSVKHVKRENFVSEIKAQIPELEKFVMEKDLITLDPEKPLVVRETPEYMRGFAGASISAPGPYDKKENTYYNVSPLDSMSDEQAESYLREYNHWILQILNIHEAVPGHYTQLVYSNESPSLVKSILSNGAMIEGWAVYTERMMLEEGYGNFEPEMWLMYYKWNLRVICNTILDYGIQVKGISKEEGLDLLMNGAFQERAEAEGKWRRATLSQVQLTSYYSGYREIYDFRETQKQKLGKEFDLKAFHEEFLSFGSAPVKYIRQLMAK
>CP031761.1|AXR01940.1|1665461_1667621_+|S46-family-peptidase
MRIKAISAAMVLAFSQYVAADEGMWQPHQLPELESILKSKGLEIDAKSISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHHCAYGSIQYNSTTDNNILENGFLAKQPSEDLPAAPGSRVYVTKEVSNVTDKVNAGTDSLTGKARFDAIDSKRKQLVAECEQDESYRCNVYTFHGGLEYYLIKSLEIKDVRLAYTPAMGVGKYGGDIDNWMWPRHTGDFAFYRAYVGKDGKPAEFSKDNVPYNPESFLSVSAKGVQEGDFVMVTGYPGRTNRYRIASEVDYVFNTVYPMVRKHNSKYVALIEENAPEGSQARIAYESTIAGYNNYIKNFGSMIESFKKGSMYSRKQQFERDLSTWINADADRKAKYGAVLNELSELVAQSQSHYERDMMVGYIHRSQMMSTARQLYRLAVEKQKPDAERESGYQERDMPKIKAGLQRMTRRYDETVDKAIMLYFMELYAALPKEARLAEVDKQLQLENGFNKAKHQALLDEMYANSKLADEKARLWMLDLELEQLNQSSDPFIQYAKAIFAVMKQIEDEEKELAGKQQSARPALMEAIIAYNKSQNKPVYADANSTLRVTYGTVGGYSPQDGLVATPFTSLEGLLAKNTDVEPFNAPKKQQQLIREKVYGQYTGGMNTVPVNFLSNVDTTGGNSGSPTLNGKAELVGLLFDGVYESIIGDWDYDKNLNRSIHVDSRYMLWVMDKVDNAQNLLDEMKIVK
>CP031761.1|AXR01939.1|1664715_1665018_-|hypothetical-protein
MPKHKTAQQWLQLFEQQELSGLSVSDFCTQHNLSIKSFYNRRSKIRKQTPPQSSFVAAKPAAPESVSPPELLQLKHGQSTVLLPSTTDTLWLAALLKALS
>CP031761.1|AXR01938.1|1664374_1664719_-|IS66-family-insertion-sequence-hypothetical-protein
MICWQNKVVYLHRQPVDFRKSINGLAAIVEQAMATSAMTGNVFAFCNKSKDKLKVLYWDKTGFALWYKRLEKDKFKWPDKEDDDVITLTAEQWQWLLSGLSVIAHKPLSYGYNV
>CP031761.1|AXR01937.1|1662806_1664294_-|IS66-family-transposase
MQNELDVLRQQLAKQEEIIAQLQARNNYLEEQFILAQQKRFGASSESHPAQADLFNEAETLVEEVPEQDVETIEYQRKKPTRQPLPKDLPRERVVHDIDNKQCGCCGGELHKMGEDVSEKLEFIPAQVKVIEHVRPKYSCRQCEKTQTQIRIVQAPVPPSPIPKGIATASLLSQIITSKYQYGLPLYRQESLFKQYGIALCRRTMADWMIRCASLFKPLYDRLHDVLLQQPVIQADETTVKVVKEDKQTNYMWLYCSGTDSPAPEASIPNIALFDYQNSRAGRCPVAFLKGYNGYLQVDGYAGYEQTQATLVGCWAHARRKFKEAADAQAKGKTGKANWALNHIQKLYRVETAIKGMSLQEKQATREKQSTPLLAQFKTWLEKSAQTVVPKSKLGEAIHYTLRQWPKLIRYLDDGHLKIDNNRAERAIKPFVIGRKNWLFSFTTSGAESSAILYSVIETARANGLTPFDYVMHCLNELAQPDCDINSLLPWNVKL
>CP031761.1|AXR01936.1|1661731_1662259_+|hypothetical-protein
MNNKPYTVLLAVILLCSCSSHTELEKLNIGISAYEKSDLMVKLIFDEQFSPPAGAVGGGWGNAVGSGTFWGAEIPYKVKAQWWDYKQGKHYGAALTVQRDKAYKIAGNLPSITHYTGETETDVEPYIIFGFGEKGEVKMWISNAPFDGVEGRILEEIGSAQATWEHFELTDEMFN
>CP031761.1|AXR01935.1|1661130_1661661_+|hypothetical-protein
MNNKLYTVLLAVILLCSCSSHSELEKLHIGISAYEKSDLMVKLIFDDRFSPPAGAIGCCWGNAQKKGVFWGAEIPHKVQAEWWDYKQGRHYNAEFSVKRDKAYKIAGNLPSVTYYTGKTETDVDPYIIFGFGEKGEVKMWISNSQFASGVKGRILEEIGSAQATWEPFELTDEMFN
>CP031761.1|AXR01934.1|1659067_1661134_+|DUF2235-domain-containing-protein
MKIVEEKHNWLIDQQIDELEVLPPHTTTAHLPSEIRTQLKPHASDWIVLQQRHNWRHVKRDEFTRVFIKTKKGLQSVRSGSAAGSREQLIIVKRKSYFKAEIRNNAFTSSGGVDLNQPIGASQLDPLTPVEQVLASINVDKSPEVAEKRILVSLEGELAVSFVIQGANTPTLSRASEGATQTPLIFGKLSEDGRYSLKAKILGVPEQVLFNNVPYADLLDIEKVKALKIGAEGGVQLIKHRVSGEGNVHLYFISEPPSIGIFFDGTGNNKYNDILDPFDDKEPTNIAKLHELYENEGKFTTSSYIEGVGTSAGKKDSTIDLAIAYSFDERLIEAVSDLDKFINNNGLIELCNTLLVDCFGFSRGAAAARAFVNLINEMREKQDTKLANKEVVFRFVGIFDTVASIGGDGDNDHGELYARDELDDAARLDLNQASAGAVYHLTAWDERRDKFPLSSLKNKDGSLFANHKEDYLPGVHSDIGGGYAPISIDIEYPLKRIRGIPGNPEHEAKVQQEKLAIEHKYQWPGINVDMVYRFKRLRYGASRSGRDKDFYTTYRPVWRRKIDNTLAHFGLHQMYNEAVQHGVPLRAMARLQSIYPYELSNEVATLVPKALKAGPASQAWQKLYEHYIHISSRFTGAVDKMAHGAERKAKYATENGQREMFYNNAKALPQVQIWKAYKNGNKSIWRKG
>CP031761.1|AXR01944.1|1671297_1671729_+|hypothetical-protein
MPLLSYVRHTATADDTTYQGCTITRAQLFGRIFSVLSALMMFNTALLFTGMLGDVAELEVLFADNSLPDSVLVMLGEFLAQPILSLQLLIGLYWLVFHTILPTRAGIVLRKTAFASTEAIQPQPVPSAHGCRAPPFGYRCLFA
>CP031761.1|AXR01945.1|1672042_1672951_+|ubiquinol-oxidase-subunit-II
MNKRSVVNYAFASLGLMLTGCSGGILDPKGQIGMDEKSLIIIATVLMLLVVVPVIILTLYFAWKYRDGRDHEIYAPKWAHSNKIEAVVWTIPIVIIIVLGVITWRSTQSLDPYKPLEGKGEHLTVQVVSLNWKWLFIYPEQGIATVNELVFPANVPVEYKITSESTMNSFFIPQLGSQIYSMAGMETQLHLIANEPGTFKGFSANYSGAGFTGMKFDATATKDKASFDNWVADIKANGEALTAGRYTKLAEPSEYHPVEYFGSVEQGLFHTIVMKYMQGHGEMSYYAKPEHAAHPHHGKAEE
>CP031761.1|AXR01946.1|1672953_1674936_+|cytochrome-o-ubiquinol-oxidase-subunit-I
MSLFGKLSIEAIPYHEPIIMVTLAVVAIVGLIVAAMVTKHKKWGVLWHDWITSIDHKRLGVMYIILALIMLMRGFADAVMMRTQLAMATSGAAGYLPPEHYDQIFTAHGVIMIIFMAMPFMIGLMNIILPLQIGARDVAFPFLNNLSFWLTAGGAILINLSLAFGEFAKTGWVAYPPLSELSFSPGVGVDYYIWALQISGLGTLLTAVNFLVTVFKMRAPGMTLMKMPIFTWTCTWANILVAASFPILTAVLAMLTLDRYMDFHFFTNEAGGNAMMYINLFWAWGHPEVYILILPAFGIFSEIISTFTGKRLFGYKSMVYASGAISILGFIVWLHHFFTMGSSANVNAFFGVMTMVIAVPTGVKLFNWLFTMYRGRLRITVPVLWTLGFMVTFTVGGMTGVLLAIPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGFAYWFPKVMGYKLDERWGKASFWCWLVGFFVAFMPLYVLGFLGMTRRLNHTNTPEWNIWLYIACIGAFIIMFGIVFQVVQLVVSYKNREQLQDTTGDPWNGHTLEWSTDSPPQYYNFAKTPVVDDIDAWTEMKEQGQAYQKPAHYQPIHMPKNTPAGVLISASLTVFCFAMIWHIWWLAAVGFVSAIAVFIKRCYTRDVDYYVQVDEIEQIESAHLSRALQEG
>CP031761.1|AXR01947.1|1674939_1675560_+|cytochrome-o-ubiquinol-oxidase-subunit-III
MSAITPATLHALEDAHEHADHDTGSNTVFGFWLYLMTDCLLFASFFATYAVLYMNTAGGVSGKDIFELGFVAVETAALLLSSITFGFAMIAANKQKKSQTLSWLAVTFAFGAVFIGMEVYEFHHLIVHGHGPQHSAFLTSFFSLVGLHGMHVTAGLIWMTVMMIEVTRRGLKPQTVTRLSCLSLFWHFLDIVWICVFTVVYLMGAM
>CP031761.1|AXR01948.1|1675559_1675919_+|cytochrome-o-ubiquinol-oxidase-subunit-IV
MSHSESQALAQMDVHEHEHDSHGSVKSYLIGFVLSVILTAIPFAAVMSGSLSSSTTFWTLVTTALVQIWVHLKYFLHLNFVTEEGKASTLSFIFSALIIVMVVGLSVWIIYESNAMMMY
>CP031761.1|AXR01949.1|1675932_1676811_+|protoheme-IX-farnesyltransferase
MLRRYFQVTKPGIIMGNLISVAGGFLLASRGEVDWLLFALTLLGLSLVVASGCVVNNVIDRDIDAAMARTKTRVTVTGEISSVAALSHSLVLGLSGFGLLAYFTNWIALSFAAFGFFIYVGVYSLYMKRNSVYGTVVGSLSGAVPPVVGYCAVSGVFDSGAAILLLMFCLWQMPHSYAIAIFRFEDYRVANIPVLPVAQGVEKAKHHIVLYIAIYALVVMLLPLSGYTGIAFMAVACTTSFWWLLMALKGYQRDLDLHGWARQVFAFSIVNITVLSIAMAIDNHSTVSAMLY
>CP031761.1|AXR01950.1|1677150_1677378_+|hypothetical-protein
MDIGITEVLLLFAAIFIASFLLFKVVLRAKKMPKGAYLFLALMPLISLFPIPPPVFKNVAKAKQEQRKKAPKSEP
>CP031761.1|AXR01951.1|1677398_1677710_+|GTP-cyclohydrolase
MSASIFIVNLTYVTEIEQVEPLLAPHIAFLERFYANGTFIASGRKIPRTGGVILAKASSEAELLDIVRQDPFYVAEVARYDIIEFVPSKFASCFTEVEKYLNS
>CP031761.1|AXR01952.1|1677699_1678230_-|TetR/AcrR-family-transcriptional-regulator
MSTKRQQLIDCAMGLFYQHGIHAIGINEVLKSSGIAKKTLYNHFESKEALVLATLEQRHHLFISWLSRCLENAQTNEQLTEQLFSALDQWINNKVAVLGDFRGCYFINTAAEFGELTNPINQLCQRHKLAVKALLKQALNDADDAAVERLFLLSEGIISTAYTCHDTDVAKRALKN
>CP031761.1|AXR01953.1|1678340_1678802_+|HPP-family-protein
MREIQLALIAGAGAFIAIAILAFSQTISAEHIFLMAPLGATAVLVFGVPESPLAQPKNVIFGHIITATIGIIFAQYIGVNEFTLALATGLGVFSMLVTKTTHPPAGANPILIMLALEGWSFLFTPVIIGAVVLVLVGKATLAAKTKLTTVTAA

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Crispr_ID: CP031761_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031761_2

2673433-2673539

Orphan

Consensus_repeat	Method
CTGTGACAACAAAAACCACATACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031761_2

>merge|CP031761|2|2673433-2673539|CRISPRCasFinder
CTGTGACAACAAAAACCACATACAAGATCGCAGGGTGAACCTGCTCCTACTCCGTGTTGTAGGAGACGCTTTACGCGGCGAGCTGTGACAACAAAAACCACACACAA

>CP031761|2|2|2673433-2673539|CRISPRCasFinder
CTGTGACAACAAAAACCACATACAA	GATCGCAGGGTGAACCTGCTCCTACTCCGTGTTGTAGGAGACGCTTTACGCGGCGAG
CTGTGACAACAAAAACCACACACAA

Protein	Signature genes	Signature genes Name	Protein_function
CP031761.1\|AXR02741.1\|2688771_2689545_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	unknown	unknown	gnl\|CDD\|235390
CP031761.1\|AXR02732.1\|2674931_2677022_+\|CadC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226233
CP031761.1\|AXR02731.1\|2672776_2673358_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
CP031761.1\|AXR02736.1\|2681100_2682408_-\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|182626
CP031761.1\|AXR03964.1\|2667654_2668170_-\|alpha/beta-hydrolase	unknown	unknown	unknown
CP031761.1\|AXR02740.1\|2687544_2688699_-\|lipid-A-disaccharide-synthase	unknown	unknown	gnl\|CDD\|234580
CP031761.1\|AXR02737.1\|2682494_2683451_-\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
CP031761.1\|AXR02735.1\|2680760_2681108_-\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR02723.1\|2658003_2659683_-\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR02726.1\|2665735_2666701_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR02725.1\|2665122_2665680_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
CP031761.1\|AXR02728.1\|2669014_2669893_-\|DUF3014-domain-containing-protein	unknown	unknown	gnl\|CDD\|378600
CP031761.1\|AXR02739.1\|2686961_2687555_-\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|234574
CP031761.1\|AXR02724.1\|2664250_2664964_-\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR02738.1\|2683467_2686959_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
CP031761.1\|AXR02734.1\|2679830_2680727_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
CP031761.1\|AXR02733.1\|2677706_2679677_-\|potassium-transporter	unknown	unknown	gnl\|CDD\|179625
CP031761.1\|AXR02729.1\|2670432_2671572_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
CP031761.1\|AXR02730.1\|2671591_2672773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378416
CP031761.1\|AXR02727.1\|2666747_2667578_+\|ATP-dependent-RNA-helicase-HrpA	unknown	unknown	gnl\|CDD\|379577

Protein	Function_ID	Function_description	E-value
CP031761.1\|AXR02729.1\|2670432_2671572_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	3.5486e-43
CP031761.1\|AXR02732.1\|2674931_2677022_+\|CadC-family-transcriptional-regulator	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	8.87631e-19
CP031761.1\|AXR02731.1\|2672776_2673358_+\|N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.67102e-21
CP031761.1\|AXR02737.1\|2682494_2683451_-\|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
CP031761.1\|AXR02740.1\|2687544_2688699_-\|lipid-A-disaccharide-synthase	gnl\|CDD\|234580	PRK00025, lpxB, lipid-A-disaccharide synthase; Reviewed.	0
CP031761.1\|AXR02736.1\|2681100_2682408_-\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|182626	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional.	1.19051e-99
CP031761.1\|AXR02734.1\|2679830_2680727_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.57742e-57
CP031761.1\|AXR02728.1\|2669014_2669893_-\|DUF3014-domain-containing-protein	gnl\|CDD\|378600	pfam11219, DUF3014, Protein of unknown function (DUF3014). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.22122e-61
CP031761.1\|AXR02739.1\|2686961_2687555_-\|ribonuclease-HII	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	6.08135e-114
CP031761.1\|AXR02741.1\|2688771_2689545_-\|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase	gnl\|CDD\|235390	PRK05289, PRK05289, acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase.	1.88064e-160
CP031761.1\|AXR02738.1\|2683467_2686959_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
CP031761.1\|AXR02733.1\|2677706_2679677_-\|potassium-transporter	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	1.91765e-95
CP031761.1\|AXR02725.1\|2665122_2665680_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	2.68137e-52
CP031761.1\|AXR02730.1\|2671591_2672773_+\|hypothetical-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	7.40811e-07
CP031761.1\|AXR02727.1\|2666747_2667578_+\|ATP-dependent-RNA-helicase-HrpA	gnl\|CDD\|379577	pfam14355, Abi_C, Abortive infection C-terminus. This domain is found at the C-terminus of the Lactococcus lactis abortive infection protein Abi-859. This protein confers bacteriophage resistance.	4.54947e-17

>CP031761.1|AXR02731.1|2672776_2673358_+|N-acetyltransferase
MWPTDKPLIGHHVTLEPLSTTHINALQQAVKDGEAWKLWYANVPNPDDMERYVNTAISQASEGNLAYAVRLNSSNEIVGTTRYYNADITNRRAMLGYTWYSDKVCRTAVNTECKFLLLRQLFEDFYAIAVEFRTHFFNHASRNAIERLGAKLDGVLRSHQIGRNGELRDTVVYSIIASEWPAVKQHLSSKLDR
>CP031761.1|AXR02730.1|2671591_2672773_+|hypothetical-protein
MYKPTISALMLIALGSISFSTQSQTFDVVQTIQNNTAGFSGLDNPRQLRFNHQGTQAVAVSGDDNAVVIFTLNANKQLVQDQLFQSSDAHPLLLTGASDAVFVNNNLILNTSFYDGALNVFAKDKAGKFNLVQTFSDEVSYKVVFDPTKNASAHDNLSLFAPWKIRLSDDKRYAFIPSYKSNTVTAFRITPANSVTWLGPIDSVKQTDMAGPVDVLVSKEANALIVAGYEGDVITLWQQTKGTYAVKQRIVKDDTNLLALSKPQALVASSDFTVFYVAAAGSNSILAFERQQNGQYHLLQIIDADQVGKPLDGVSSLLLTPDGKRLYAASESSSGIAEFSVNATGKLTHTVTIDDLTNPLANISALAFVTDPNHLAVSLAKQDTIKILKMRKQ
>CP031761.1|AXR02729.1|2670432_2671572_+|patatin-like-phospholipase-family-protein
MRKHRTSDKKIALLLTGGGARAAYQVGVLKALAQCMPRTSPLPFDIIAGTSAGAINSAGIACYASCFHLAVKKVEYIWKNFSTDMVYKSSFTGAYGHLFANMMRSFQAQYLNQPPASLLNNSPLRKLLANVLDLNRIDHNLHRNYLDAVAITVSSYSTGKSVAFYQANDAKPWQRSKREGIPGTISLDLLMASSAIPMVFPSVRVKHHYYGDGSIHQLSPLSPAIHLGADKIFVIGVEQPKLPQPLGYEPHFPGMSVVAGHLLDSVFSDTLNSDIERLDRVNRTVSLLPAREKHKELRRVDHMLINPTVNFNEVADHYYEDMPLAIKLLLRTMGVKKHSPSSLTSYLLFERTYTQKLIELGFEDGMNRLDEMRAFLELK
>CP031761.1|AXR02728.1|2669014_2669893_-|DUF3014-domain-containing-protein
MSENHQEGNKRPSNSQLLFAAVVVLALIIVAVFVLAQKDTPSTENQKVKQDIVVPEQTETPLVNTARETQPEQVVESEVTLPPQREQIEPEQVEPVEPEVTLPPLSQSDVEIKEAVSNYLSNQAVKLLADDDVIRRTVVYVDNLAKGKVAENHAPVVKPQDGFSVIDDDIIITDPNSYERYTPYVAMFDTMSTAQVVRLYDQYKPLFEEAYEEIGYEGDAFNGTLTDAIDELLATPIPDTALPLVKDSVTYKYAYAEWEQLSPAQKQFLRMGPENMKKVKKRLEEIKIALNK
>CP031761.1|AXR03964.1|2667654_2668170_-|alpha/beta-hydrolase
MLQELCTSATTRTTNALTVLNAVLEQQSRITPLDFSMATIGRLSKEQGGPSTQTIRNRTGKHFQQLIEAWAAYAGTSCKKPLSVRQKQLLNSNDQHILDAIDDPVIRAVVGSLIAERNKYRDQLNTLKAAISDAFFNKQGWEVMPTGQVKDAEGNEIYKRGYVNGLRKMLP
>CP031761.1|AXR02727.1|2666747_2667578_+|ATP-dependent-RNA-helicase-HrpA
MNKQIPAPLIAVSADALSNLETHASMDSLFMYSNAPGEPPEGSKSVKALEWLRRVNSQSNEPLDILGKLIENYMENPDYQSEYTEVMFQKVENEAYQYVQNIRKCLSRYGLEYHQGGLILDGASAPIKSLSTIIKNRDLPAINAEFDRALENLVRDPREAILAACNILEAVCKTFIEDAGLAMPAKKDLQGVWKVIKDELGFDIRQIQDEDLIRILSGLFSTVSGIGALRTHASAAHAEGRTRYNIKPRHARLAVHAAHTAAVFIIESWDEKKVNS
>CP031761.1|AXR02726.1|2665735_2666701_+|hypothetical-protein
MEVLIPFAKDKNGSLAFVDEVESGLECNCFCISCDMPLSAHKYKTNIRRDHFKHAPKVNSKDKPCEISYKRAIFWLCRNILATNSSIHLPRYVGYPNSDKSDEGVLITEEKVYEYQSKVTLNPAIESAQNEIAILHTNDFDITLVLTLESSTYQFSSTYNQKSAIVVVDVEDFRKYVEGKVNSYREQVESELLEKLSIKHWHYHPQQTQRFTEFYRSKNQKIQLAKKEQAQRKWEEQQQLAEEIEPLYDPVYGFQQNPRYKRKLTRAFREIIDLNPAPKQYETRWFRCPSCFHVWSRSSEDVPYSKKLTECSHCTSPVKID
>CP031761.1|AXR02725.1|2665122_2665680_+|recombinase-family-protein
MSKIGYARVSTTDQSLGLQVAKLEETGCDKVFTDMASASNTKRDGFQALLSYLRAGDTLIVTRVDRIARSVLDLQTLVNHLKSNDVQLQALEQPISTNSASGKAFLDMLAVFAEFELNIRKERQLEGIAAAKKAGKYKGRKPISDNTKQSILSLRAKATPVSQIASTVHVSRNTVYKVINQDINK
>CP031761.1|AXR02724.1|2664250_2664964_-|hypothetical-protein
MDLQNPDLILVKRLSEHSCSYFVVESIAGTDVVLTDIESGGRFNFEKPRLEQLVSNGQLRTIARRELPTKLTFKPLSNVKKPKAETAEDVTSKKEMERRYKYVQGAIEQSVPAYTEKWLAPFIAQKAVEINDSSPPSWRTLAHWNKAFVESGWDKHALTPRHKAKGNRTKQLPQEVHDLIDEVINEYLRTHTVVRYQKVYDLLLEQLDTLNAERRKADLVELRPCSYRWIVNRLQNG
>CP031761.1|AXR02723.1|2658003_2659683_-|hypothetical-protein
MKKSLAIVVFITAVVGIAVFVIGDIQKKTLKEAIASAVNVEPSKLLLNLPPKHARFPGSILSPSNSSFMVYSSGDADDESILRSEQFTIEAVVNDMSNIHAGGKSSLFNSAFSNDGQLEVTLNIKDAFIAELPVGVLKEKIAKNVLVQAAMENNIEPIIVSRAYVGVVEYVVRALNESGVKTLVDMSKTGYKVEKARLGSFNFSDNIEGRKEISFSINSPIVFAYEVMEASYVATDLSDKGALVLNELSSRRVAEIGNENPVQEQKTNKSFGVVTIGNAHYANFRSLDIPQSTEASLLMGQFFESYDPVFVKQLNSTKQMPISDDKLLDWTVDLALELLENPVEHLVVYYTGHALSLPNGEIALLQGNVNKDYAERAAQSYSPSLSESGDGLVLVEQLYNALSMANVPFTLMIDACYPNDEMADALTRVSMLLGNKEGTELYYIGDSALITNELSDIGKVMRQIGSRFEYRQQNNAVIFSSKPGAKSVFKSNPVNPYGFELPPLAARILKFSDLVDSNNRKEKLSKIVRMNIDSLNGVGEISLSGSITWSNLETMMNSL
>CP031761.1|AXR02732.1|2674931_2677022_+|CadC-family-transcriptional-regulator
MELKQFLIAEHLVDVNRNHIVIDQQTFALPPKAIAVLCELAKQPGEVVSFEQLLNTVWHDRVVSPNTLQRCIFQIRQVFKYADSELEFIKTHSKKGYSLEAPVTSTSDKPIAHKATQKSRPRAAKLGVAALAIVITAYLFTVIIQPETNPRVPIQPTFTPMTTSDAWDANASYSPDGQWIVFQRFSDNCHSQLWVKNLASHNTSRLTARQGVYGKPSWSHDAKQLTFTERSHCKAQETSSFCWSLNTLDVDTAINSPQNPHAVIACQEKPMWRANWMKNGEISYLSHLRPKQAVPYLFDLKTRKSRTTEYLPNFENYTLDYLANQNVFAMVSIDEHNSHHLNIYNPDKTPTVTAKIVLPHELSPLQPIEVSYHPSGEYLLASTTNGLYKLETNGRMVALDTGGRKNLREASFSADGKQILATQINADTDIFTLSLAQIRNHQTATTAKIARTTMREDNPQFQPHGDHIAFTSTRTGSRQLWLYNDQDVSQLTDSQQDNISKRIVWSPTGNAIAGTTQQGLTLWSLNGEKTLISNSLAIDSVLQWLTPTTLLVTARENGNAGLYILNKDTKESSLIVSENVVWAAQVDSEHFLYQDMSQRFWLVNTNTVPVPTEIYELRTQLAQPFAVYKDGILYGVNNDNQLWSYHLSKKIYQRLANVPSNSRYLADFNGETFLFTQMHLLQKHIVSFNSPDDQGT
>CP031761.1|AXR02733.1|2677706_2679677_-|potassium-transporter
MQSIFAQVFALLLCAVILVWSFKRIGLPPILAYLLTGVIAGSHGIGWMSDSQEIHFMAELGIVFLLFSLGLEFSVPKLMAMRNVVFGLGSLQVIVTTIIGMLVLRFMQYEWVGAFVIASLIALSSTAVVVKLLKELGMLNTRHGQLGIGMLLFQDIAVVPLLIAFPLISSASNSELASALLFAFAKGAVVCLVLWAIGKWLLPKIFNEIAMVRTDELFVLSTLVVALCAGSLTYSFGLSMALGAFLAGMMLGESQYRHQLEAEIRPFRDILMGLFFVTVGMQLDIPYVLDQFIYIVAALAVVLVIKMLIIVAIAQLMGERKKDAWGAGILIWQMGEFGFVLVALANKHQLLDKNEVSFLITLGVLSMALTPYLISKTAYIINILGIEKDWQPEAPSGYNAADLKDHVVIFGYARVGQTIARFLRPEAIPYIAVERNPQIVQDAQIAGEPVLFGHAAQKTLLKSANIDKARLVIITFDDFEQTQVVVDAIRRRTHEVKILVRMKDDSYMEQLKAMGVAEVVPETLEASLMLVSHVLYMSGVPMRRIFRRVSKERENRYPYLHGFFAGDSGDLHEVKGERLEYLHAIALPDNAFAVNKSIAELELNVKRVDITALRRDGEEIAQPAEQTVLRVNDVLLLKGKPRRVERAEQFLLDGLP
>CP031761.1|AXR02734.1|2679830_2680727_+|GGDEF-domain-containing-protein
MENVHILTQRLPTRGDYLPFNSEQYSTQGGEHYARLVDKLQTTLDIEELLTIYAEHVARISKISGLQFHCSFGVFQMKDSDSQFPASTFDLELEKEHLGQLVYFSEFPFSEAIKAKLSKLHACLIYPMRNALMYNRVLQLATKDSLTGLYNRSQFTDNLDEKLERCRRQHRNFSLMLLDLDNFKQVNDVHGHKAGDEVLVEFSRILQTSTRATDSVFRFGGDEFAILIDDPAFTTNKVIAERIMEAVRKSSMLAKYTVTTSIGFTLASSHDTADNIFARSDSGLYRAKAAGRNCARAV
>CP031761.1|AXR02735.1|2680760_2681108_-|hypothetical-protein
MTESKKIGQQLARKAPYAVAFTVAVFIVLFISSEVVWLNQVFASASGIISIVFLLLYWHGKGGMYFILGLLAPMLAVMFSELPDFLALAWVINGFFNGAALTLMAYLYLGKGAQR
>CP031761.1|AXR02736.1|2681100_2682408_-|tRNA-lysidine(34)-synthetase-TilS
MINSRVYQQLERSVKVLSSSLDVKGLCIALSGGVDSVVLLHLCRVYAEKHDVTLQAIYVNHGLSQHATHWQQFCQSLCETLNVPFVAKQVSITRKTRTSLEAQAREARFQALDEAAKAGYAIVLGQHADDQVETFLLRLKRGSGLLGLGAMRATTQLPSGRYCIRPLLAVNRCDIEAFALQFGLEHITDESNADDAFERNFLRNQVIPLLKSRFNGFVGSTLRSIDILQRQQAIIDEVSEEDLQKCRCQAALNIVALQQLSDARRDNVIRLWLSKQGVDMPSQKQLDEIVQQAFSSRQDSQLEMRFKQGAVRRYRDALYWVTKNRQKHDIEAVNLNELSGQSTPVAIQTGKGIRRPFADEIVSIRYGRLKDRIKPQSKPGSNTLKHWLKDLHIPSWERDSIAVVYYNDTPVAVNGLFVSAEHAKDNGIIWVVKDD
>CP031761.1|AXR02737.1|2682494_2683451_-|acetyl-CoA-carboxylase-carboxyl-transferase-subunit-alpha
MSLNYLEFELPIAELEAKIKELQNVSRSGDLDLSLEEEISRLKDKNVELTKKIFDGLGTWQVSQLARHPLRPYTRDYIERIFTEFDEFAGDRTFANDPAILGGVARLDDKPVMIIGQQKGRDTAEKIKRNFGMPKPEGYRKALRLMEMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLKVMAALKVPTICTVIGEGGSGGALAIGVGDRVNMLQYSTYSVISPEGCASILWKSADKASLAAEAMGVSASRVKELDLINNIIEEPLGGAHRNYDAMAKNLKVQLKRDLADLEALGTEEMLDQRYKRLMSFGYC
>CP031761.1|AXR02738.1|2683467_2686959_-|DNA-polymerase-III-subunit-alpha
MPAPQFVHLRVHSDFSMVDGLAKTKPIVARAEELAMPALAITDQMNLCGLVRFYGSAHGAGIKPIIGADFWLKSDQFPDEPSRILVLAKNNQGYKNLTLLISDAYLRGHVFHRPVIDKEWLAKYKEGLILISGAKDGDLGKAILKGNPKLIEETLAFYEQHFNDHFYIELQRTARAREEEYLHGAVEIAAARNIPVVATNEVVFLHEKDFDAHEIRVAIHDGYTLEDKNRPKRFSKEQYLKTSEQMQALFSDIPEALENTVEIAKRCNVTVQLGTYFLPDYPTGDLAIEDFLVKVSRDGLEERLQFLFPDENDRKEKRGEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNGIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAKLYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPGDPGMTLAKAFDVEPRLPEAYDSDEEVRELIDKCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDEEGKFPVTQFDKNDVETAGLVKFDFLGLRTLTILQWALDMANERLGRESREPIDIAAIPLDDPASFKVLLDAQTTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEVSYPDAQYQHESLQPILEPTYGIILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEMAKQRATFEDGAKDNGVEGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHFPAEFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNAGVYKFTVNRQGEIVYGIGAIKGVGEGPVEAILEARAEGGEFKDLFDFCARVDLKRLNKRVIEKLIYAGALDKLGPDRDQPGRATLLASLKDAMKSAEQHHKAESLGQSDLFGLLAVEPEEVEQAFIKATPLSDKEWLNGEKETLGLYLTGHPINQYRKELKYYTSGKLVDLQPGNRDTVATAAGLVINARTLINKKGARWGLITLDDKSARIDVRLFPEQFEMYQEMLQINQILVISGQVSFDNFSGGITMTAREISTIAQAREKRISAIKMTLNMAQIDANFFDNFKKVLEPYKFGTCPVKIKYQRPDALAELTLGTQWCVTPSDELLTRLSLLAAQELELEFN
>CP031761.1|AXR02739.1|2686961_2687555_-|ribonuclease-HII
MQIERPDVQYIAGVDEVGRGPLVGDVVTAAVILDPTKPIVGLTDSKKLSEKKRIALAEEIKEKALCYCIARASVAEIDELNILHATMLAMTRAVEGLDIQPEHVFVDGNRLPKLSISATAVVKGDSLVAEISAASILAKVTRDNEMLALDSEFPEFGFAGHKGYPTKAHFAALEAHGVTPHHRTSFKPVQRILAEKE
>CP031761.1|AXR02740.1|2687544_2688699_-|lipid-A-disaccharide-synthase
MANEKNITIGMVAGELSGDILGAGLINALKVHYPNANFVGIGGPKMQQAGCNSLFDMDELAVMGLVEVLGRLPRLLKIKKQLVNYFIDNPPDVFIGIDAPDFNLRVEKPLKAAGVKTIQYVSPSVWAWRQKRIHKIAEATNLVLSLLPFEKAFYDKHEVPCTFVGHTLADEIPLEPDTAGARAQLSLSQDDTVLALLPGSRGSEVGLLSRTYLATAKRLVDKIPNLKIVVPLVNEKRRAQFLEALKEVAPELNPIMLDGQSALAMQAADTVLLASGTATLEAMLYKKPMVVGYKLNPKSYWIFNTFFTFNIKYFALPNLLADAPLVPEFLQAECNPDALADALFPMLKGDNSKLIRKFYEIHENIRLNASKQAAQAVMELIDAN
>CP031761.1|AXR02741.1|2688771_2689545_-|acyl-ACP--UDP-N-acetylglucosamine-O-acyltransferase
MAIHPTAIIESGARLGENVSVGPYSYIGNDVVIGDNCKIESHVVIKGPSEIGSGNHIFQFASVGEACQDKKYKDEPTKLIIGDNNVIRECATIHRGTIQDEGITRIGSNNLFMAYTHVAHDAVIGSNVIFANNASVAGHVHIGDWVILAGNSGVHQFCKVGSHAFIGMYSGVNQDVPPFVTTTGTPARPVAINTEGLKRRGFESDEIMATRRAYKTLFRKGLRLEDALEALKEEASEFAAVQQMIDFIATSNRGLIR

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Crispr_ID: CP031761_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031761_3

3374315-3374771

Orphan

Consensus_repeat	Method
CAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA	PILER-CR

4 spacers

The CRISPR arrays of CP031761_3

>merge|CP031761|3|3374315-3374771|PILER-CR
CAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCACTTTATTTTTTTGGATAGAGTGGCCGATGCAAAGCATCGCACTAAGCCTGAGCAAGGCAAGGGTCACTGGTTCAAGTCCAGTACAACCCACCATAACTCTATTCAAGAGTATAAATTGAAACACAATTTGGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCACTTTATTTTTTTAGATAGAGTGGCCGATGCAAAGCATCGCACTAAGCCTAAGCCTGAGCAAGGCAAGGGTCACTGGTTTAAGTCCAGTACAACCCACCATAACTCTATTCAAGAGTATAAATTGAAACACAATTTGGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA

>CP031761|3|1|3374315-3374771|PILER-CR
CAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA	CTTTATTTTTTTGGATAGAGTGGCCGATGCAAAGCATCGCACTAAGCCTGAG
CAAGGCAAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA	TAACTCTATTCAAGAGTATAAATTGAAACACAATTTGGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTA
CAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA	CTTTATTTTTTTAGATAGAGTGGCCGATGCAAAGCATCGCACTAAGCCTAAGCCTGAG
CAAGGCAAGGGTCACTGGTTTAAGTCCAGTACAACCCACCA	TAACTCTATTCAAGAGTATAAATTGAAACACAATTTGGGTTGTTAGCTCAGTTGGGAGAGCATCGCCCTTA
CAAGGCGAGGGTCACTGGTTCAAGTCCAGTACAACCCACCA

Protein	Signature genes	Signature genes Name	Protein_function
CP031761.1\|AXR03329.1\|3381034_3384424_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274008
CP031761.1\|AXR03326.1\|3377688_3378201_-\|DUF2919-domain-containing-protein	unknown	unknown	gnl\|CDD\|378569
CP031761.1\|AXR03321.1\|3366752_3369074_-\|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB	unknown	unknown	gnl\|CDD\|236842
CP031761.1\|AXR03320.1\|3366026_3366746_+\|two-component-system-response-regulator-ArcA	unknown	unknown	gnl\|CDD\|183013
CP031761.1\|AXR03319.1\|3365397_3365919_+\|YfiR-family-protein	unknown	unknown	gnl\|CDD\|379335
CP031761.1\|AXR03323.1\|3370420_3372010_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|214599
CP031761.1\|AXR03330.1\|3384488_3385250_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349982
CP031761.1\|AXR03322.1\|3369395_3370316_+\|GTP-cyclohydrolase-I-FolE2	unknown	unknown	gnl\|CDD\|237466
CP031761.1\|AXR03327.1\|3378205_3380224_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
CP031761.1\|AXR03317.1\|3362585_3363614_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181902
CP031761.1\|AXR03331.1\|3385350_3385647_+\|hypothetical-protein	unknown	unknown	unknown
CP031761.1\|AXR03332.1\|3385723_3386161_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
CP031761.1\|AXR03316.1\|3361774_3362500_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
CP031761.1\|AXR03328.1\|3380290_3381016_-\|cell-division-protein-ZipA	unknown	unknown	gnl\|CDD\|367907
CP031761.1\|AXR03314.1\|3359195_3360167_+\|octaprenyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|182813
CP031761.1\|AXR03315.1\|3360231_3360504_-\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
CP031761.1\|AXR03324.1\|3375591_3377223_+\|response-regulator	unknown	unknown	gnl\|CDD\|381123
CP031761.1\|AXR03333.1\|3386257_3387265_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
CP031761.1\|AXR03325.1\|3377246_3377687_-\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|376583
CP031761.1\|AXR03318.1\|3363778_3365401_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
CP031761.1\|AXR03329.1\|3381034_3384424_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
CP031761.1\|AXR03326.1\|3377688_3378201_-\|DUF2919-domain-containing-protein	gnl\|CDD\|378569	pfam11143, DUF2919, Protein of unknown function (DUF2919). This bacterial family of proteins has no known function. Some members are annotated as YfeZ however this cannot be confirmed.	2.38408e-32
CP031761.1\|AXR03321.1\|3366752_3369074_-\|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0
CP031761.1\|AXR03320.1\|3366026_3366746_+\|two-component-system-response-regulator-ArcA	gnl\|CDD\|183013	PRK11173, PRK11173, two-component response regulator; Provisional.	3.9818e-153
CP031761.1\|AXR03319.1\|3365397_3365919_+\|YfiR-family-protein	gnl\|CDD\|379335	pfam13689, DUF4154, Domain of unknown function (DUF4154). This family of proteins is found in bacteria. Proteins in this family are typically between 172 and 207 amino acids in length. Many members are annotated as valyl-tRNA synthetase but this could not be confirmed.	1.42497e-21
CP031761.1\|AXR03323.1\|3370420_3372010_-\|PAS-domain-S-box-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.25598e-58
CP031761.1\|AXR03330.1\|3384488_3385250_-\|RNA-methyltransferase	gnl\|CDD\|349982	cd18109, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	5.91849e-71
CP031761.1\|AXR03322.1\|3369395_3370316_+\|GTP-cyclohydrolase-I-FolE2	gnl\|CDD\|237466	PRK13674, PRK13674, GTP cyclohydrolase I FolE2.	1.20221e-117
CP031761.1\|AXR03327.1\|3378205_3380224_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
CP031761.1\|AXR03317.1\|3362585_3363614_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|181902	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC.	3.32403e-85
CP031761.1\|AXR03332.1\|3385723_3386161_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.13276e-13
CP031761.1\|AXR03316.1\|3361774_3362500_+\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	2.27753e-109
CP031761.1\|AXR03328.1\|3380290_3381016_-\|cell-division-protein-ZipA	gnl\|CDD\|367907	pfam04354, ZipA_C, ZipA, C-terminal FtsZ-binding domain. This family represents the ZipA C-terminal domain. ZipA is involved in septum formation in bacterial cell division. Its C-terminal domain binds FtsZ, a major component of the bacterial septal ring. The structure of this domain is an alpha-beta fold with three alpha helices and a beta sheet of six antiparallel beta strands. The major loops protruding from the beta sheet surface are thought to form a binding site for FtsZ.	2.70354e-48
CP031761.1\|AXR03314.1\|3359195_3360167_+\|octaprenyl-diphosphate-synthase	gnl\|CDD\|182813	PRK10888, PRK10888, octaprenyl diphosphate synthase; Provisional.	1.08011e-155
CP031761.1\|AXR03315.1\|3360231_3360504_-\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	9.66757e-55
CP031761.1\|AXR03324.1\|3375591_3377223_+\|response-regulator	gnl\|CDD\|381123	cd17589, REC_TPR, phosphoacceptor receiver (REC) domain of uncharacterized tetratricopeptide repeat (TPR)-containing response regulators. Response regulators share the common phosphoacceptor REC domain and different output domains. This subfamily contains uncharacterized response regulators with TPR repeats as the effector or output domain, which might contain between 3 to 16 TPR repeats (each about 34 amino acids). TPR-containing proteins occur in all domains of life and the abundance of TPR-containing proteins in a bacterial proteome is not indicative of virulence. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays. Some members in this subfamily may contain inactive REC domains lacking canonical metal-binding and active site residues.	6.57418e-42
CP031761.1\|AXR03333.1\|3386257_3387265_-\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	0
CP031761.1\|AXR03325.1\|3377246_3377687_-\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|376583	pfam01641, SelR, SelR domain. Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterized with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidized methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain pfam01625. The domain has two conserved cysteine and histidines. The domain binds both selenium and zinc. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family. This family has methionine-R-sulfoxide reductase activity.	1.13738e-69
CP031761.1\|AXR03318.1\|3363778_3365401_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.36643e-31

>CP031761.1|AXR03323.1|3370420_3372010_-|PAS-domain-S-box-protein
MTKGRADYTGKENDYPSSYNLLSTTNVKGQIKYANSQFCEVAGFSLSELEGKPHNIVRHPTMPKAAFKNLWDYIEAGKPWMGMVKNRCKNGDHYWVNAFVTPIKDSSGKTVEYQSVRTKPSREVVNRAEGIYADLNNGVSLSKFTRSSWSLSAQMMAIIVVFYALSMLVSTLSSPWNYLAETLLTLTVLFVTYSRLAPVRSLSEKAKKVYDNPLMQKVYLNKVNDVASIELALLARESELRAVLGRVKDASATVSEYATKTVQECKTSSDILNRQQAQTGSLATAINQMTVSIGEIASNTNNAAQQSEAALESVVKGNKAVDDNMENNYALSEELSRTQKDIEDLNAQTVNIEGVVDVIRGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAQRTQDSTAEINGIIADLRQRAERAVTAIQSGVERSSECVLKAEGTKVSLETINTIVNEISGLNYQIATSTEEMSSVSNELNANAVTISGLADESMESARKTHETMKKTEQALDNQEVLVEQFIRKLNSTHR
>CP031761.1|AXR03322.1|3369395_3370316_+|GTP-cyclohydrolase-I-FolE2
MQNNMPDIAHNASALQTGTLDWVGMGNIELPLVLESKGLNQVTVTAKADAFVNLQKEDAKGIHMSRLFLALDILSCEQVLTPSTLKQLLDNFLSTHSDLSTGAKVTLRFELPIRRPSLLSKKMGWKSYPITLDATLNNGIFKLELALDVAYSSTCPCSAALSRQLIQNAFQQSFDGKQLDFHSVHDWLGSTEGIVATPHSQRSIANIKVKLIDNCNEFEILELIELVENELKTPVQAAVKREDEQEFARLNGQNLMFCEDAARKLKALLNQQTYSDFYVKINHYESLHAHDAVAYAVKGVEDGYSV
>CP031761.1|AXR03321.1|3366752_3369074_-|aerobic-respiration-two-component-sensor-histidine-kinase-ArcB
MTENSFGSWARILSNLVEKYGNKRAFAIAYAFTLFVAVILSCMFYYVALGVVEIVDISALFFLTAVIAPALIMMSVAAMREVHSSKAYLESATQQEKMLNQTLKDNINRLNSEIDERKIALHAKHRAIDELRKEIAERKKTQQELAQQGMLLRSIVDSSPDLFYYRDENGVFAGCNKMFELVMGKSSEELIGKSVEQIYSKQYLPKVLETDSQVSETQQPLTLDVEYPVKGEPRWFEMRKLPFINDKGEYIGLLAFGRDITSRKEAEQALETAYKDKGKFIATLSHELRTPLNGIVGLTRMMLDTDLTAQQKSWCNTVFSSAETLGNIFNDIIDLDKIDREQLDIATDSINVSDFINDVVNFAGLIADQKGLEFTINRSGVLDVYALLDPTRLRQVLWNLINNAVKFTHKGNVTLECRRENRDDGPWLTISVIDTGMGISEDQLERIFEMYYKAPDASGSNAIGSGIGLAVTKALVQAMQGTIAVTSQEGKGSRFDVEIPLQLCNAPKEQSYAGRSLYILLVEDVPLNAEIATNLLEQRGHEVIWAETGEDALSFVETEDDLDLILLDMQLPDINGDVVARQIREDSHFDHLPIVALTANVRSAEQELEGINVQGALAKPINTTKLDKMLAELFGIEAQKNKQSIDIREALSQPEYSDLDIETICDFVESMGAAAFQRSCDLFTKLNPKYCQELREAVAQNDIEEYGAVAHKVKGAAGSVGLQLAQLQAKKMELESEGKEVKTLLDWVSELEAKIEEGQEALHPLIAKLAEDQ
>CP031761.1|AXR03320.1|3366026_3366746_+|two-component-system-response-regulator-ArcA
MQTPVILIVEDEDVTRLNLVSLFEAEGYKVIEAIDGDDMHDKLTSHDDVNLVIMDINLPGKNGLILARELRQKKNIGLIFLTGRDNDVDRILGLEIGADDYITKPFNPRELTIRARNLISRTGSSAEESTIDSNGVITFNGWELDENSRCLTSPTGDSKRLPKGEYRALRLMLDSPGRIFSREQLIKHMTGRELRANDRTVDVTIRRIRKHFETDNNTPELISTIHGEGYRFIGKLDAQ
>CP031761.1|AXR03319.1|3365397_3365919_+|YfiR-family-protein
MRLINLVILLLFVSLNTAAKSPDQVRSAFLYQMAKFVEFPDENTKTSIQFCFYSLESGPASELKSATKLNVRGKPIELVEAKKTWSYSELSSACDITYIDETSENDILSAWTDTIESNMLTVGESIEFLERGGIASLVQEGSKIRLYINKQALEKQYFIVRSRLLAVSKFHPN
>CP031761.1|AXR03318.1|3363778_3365401_+|sensor-histidine-kinase
MSKQLTKTSIRKVLISAVMLVTALCLSLSISISTYLDVKEQKQLIINKIEMIADIVAFNSQITILFDDRKTEDARLKSFQQVDIIKNIHIYAMDDVTNSPVFFTSYNASRTPPVPLKVNQIEELKTPKVSEDYIELIKPVIYEGNIEGYVYVRGGLERLSNYINKKILVDIALTLFVLLLVLLVSRGIQKRIATPIEGLSALLQDVSKNHNYSARAPGSNIAELNVLANNLNIMLARTENQLERHKADKQEIKQLNQSLEEKVNQRTIALREANQELLNALERMHQYQNQIIENEKMASLGQMVAGVAHEVNTPIGLGITGSTLLRDKLSDIREAFQTKSLTSKQLERFVNDGIENLDLIYRNLNRAAELVSSFKRLAVSQDLEVNSQIDLSNLLTEVVASMRAELSTKQPEVTIDCDTGLAIESKAGPLQQVLEQLISNSLLHGFKDQQNNSISITVKSSMGQLTIEYADNGMGVPKAIKKRIFDPFVTTRRGEGGSGLGMHLVYNLVTQALGGSITLDEEFSQGAKFIITLPLSGNLK
>CP031761.1|AXR03317.1|3362585_3363614_+|methyltransferase-domain-containing-protein
MQFTNPSLLLLRNEEELIANNILVINHQRDGFLRELKALNPSSAIHAFSFDFADHLHADKIADVKSYVAHQLPQLQNIDLVIYYYPKSKPEAQMVFDNIRHLSTAETRLLVVGENKSGVKSAEKQLKEHAAHCYKLESAKHCILYEFDQLTANPSFDVSHYVQTFSVRIAKTEFTAASLPGVFNHGKLDAGTQLLLENVTLPYKGKVLDFGCGAGLIACYALLNSPTLKFTCLDVNALALFATQQTLALNNLSATLLLSDGLSELNGKFNLILSNPPFHTGLSTDYDIAEQFLHNIKRHMDTKSNIQLVANSFLKYPPILEAQFEQFEVVTKNTKFAIYKAQ
>CP031761.1|AXR03316.1|3361774_3362500_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MNESSKSALEQAQEEGKYIRKVRSFVKREGRLTKGQAASLEKCWPAMGLEHQQGLLDFTEVFGNSNEVVLEIGFGMGKSLVEMAKNNPQQNFIGIEVHRPGVGACLMDADEQGVTNLRVFEHDAVEILADCIADGSLAKLQLFFPDPWHKKRHHKRRIVQLEFAEKIRQKLKVGGVFHMATDWENYAEHMLEVMSAAPGYQNQSQSNDYVPRPDFRPLTKFEQRGHRLGHGVWDLMFKRIS
>CP031761.1|AXR03315.1|3360231_3360504_-|oxidative-damage-protection-protein
MARTVFCQKLQKEAPGLDFQLYPGEVGERIFNNISKEAWQQWQHKQTMLINEKHLNMMDPEHRQMLEEQMVGFLFEDKEVEIEGYRPPEK
>CP031761.1|AXR03314.1|3359195_3360167_+|octaprenyl-diphosphate-synthase
MDIKTIQNLVEQDMLDVNQLIHQQMQSDVALVKQLGLYIVNSGGKRIRPMLALLAARALGYEGDKHITLATIVEFIHTATLLHDDVVDESLLRRGEPTANAEFGNAASVLVGDFIYTRSFQLMVGLGNMEVMQILADATNIIAEGEVLQLMNCNDPDTTEKSYMQVIYSKTAKLFEAATLLPAVVLEQSDEIKTALKLYGMHLGTAFQLVDDILDYSANAELLGKNIGDDLAEGKPTLPLIYAMQHANTQQTAQIRTAIESGNGLDHLEDILATLAETKALDFTMAKAQEEAQKAIAQLSVLPDSVHKEALVALAKLSVDREY
>CP031761.1|AXR03324.1|3375591_3377223_+|response-regulator
MSAPSIQNAKMLIVEDQPLALSYMKQSLEQLDFRNLKFAESADSAKELCTINKFDLIVCSFGLTKKQNGYQFYEELRYKQLIRSSTAFIFISSETSPELVHSVIELQPDDFLVKPFSIKELQNRIERVLKRKQALRHINLLVDDKNYSKALKALDSELDNKEHNYTSLLLKLKGELLLRLNQLEEAKSFYKSVLALQKFTWAKLGLVEALITNNEDVIAQKMLKTLIERPETRLPALDLLSKLEIKLNQYENAQQLLEQAIEMAPRNINRQQSLGRVAQINHDYEASYKAHKDIASFARYSIHDKPEVYLNAARAGIDFALSTDQSDQVTRLTRQTQQYLSDLKQQFPNAQTQAQIDVLNARVHYLKDEHKKAKQLLEQLEDEPVIRSVDSTLDKAKALHEVGLNHKAQELFSQVIAHCERHNSSADPVTMHYLYQQQQEKKEITMGPRELNNHAVTQFNKGQYETALEAFTQAFRIMPKNSGIALNLLQCMSDSCAKSGSTFNSNLAKRCTTLLNQSELDSEQQIRYGKLKAKLNEMKLDFE
>CP031761.1|AXR03325.1|3377246_3377687_-|peptide-methionine-(R)-S-oxide-reductase
MLKWLDILNFARNGNPVAPRRVDKSDQQWQSELAPETYMITRKKGTERPFSSQSCQLFEPGKYYCVCCGELLFDAEEKFDSGSGWPSFTQPAAVEAVAYHGDKSHGMTRVEITCNVCDSHLGHVFPDGPEPSGLRYCVNALAMEKK
>CP031761.1|AXR03326.1|3377688_3378201_-|DUF2919-domain-containing-protein
MKPVIRYGPEYWDKYGVYRTPIAFNLALVVLLRPLLIWGFSALARRPDLDLMSLFFESKFHFFVATGIACIALIPTVVFSLRRPTSSPKLAAVWRYMRLPLILTAVLDLAWLILQAGKTHYSFSPYIAVQIVLVSWVLLYLIKSRYLSCFFGDWPLPVEEQKTEVNKREN
>CP031761.1|AXR03327.1|3378205_3380224_-|NAD-dependent-DNA-ligase-LigA
MSDNIESQVAALRQQLEDYNYQYYVLDNPSVPDAEYDRVMRQLMALEQQHPELQSPDSPSQKVGGEALSKFEQVTHRVPMLSLDNAFDESEFTAFNRRLKERLLTSKDVTFCCEPKLDGLAVSILYRDGVLVQAATRGDGQVGENITENVKTIRNIPLKLRGDHIPHEVEVRGEVFMDTAGFIKLNETAQAKGDKTFANPRNAAAGSLRQLDSKITAKRPLMFYAYSMGLVEGGELANEHYAQLQQLQGWGLPMSPETKLVDNAQQALAYYQDIMTRRAELPYEIDGVVIKVNDKAQQEQLGFVARAPRWAIAFKFPAQEEITQLLDVEFQVGRTGAITPVARLEPVFVGGVTVSNATLHNGDEIARLGVKIGDTVIVRRAGDVIPQVTQVVLDRRPDDAKEIEFPDTCPVCDSHVERVEGEAVARCTGGLVCRAQRKEAIKHFASRKALDIDGLGDKIVEQLVERELIKTPADLFILRQGHFESLERMGPKSAKNLVAALEEAKQTTLAKFLYSLGIREVGEATAQNLANHFLTLEKVMAASIDTLQQVSDVGVVVAQHIHSFFAEQHNQEVVTALIEVGVTWQDVAAPSEDTQPLAGLTYVLTGTLSQLNRNDAKSRLQALGAKVAGSVSKNTDAVYAGEKAGSKLTKAQELGVEVFDEEALIALLNKYE
>CP031761.1|AXR03328.1|3380290_3381016_-|cell-division-protein-ZipA
MATELRWALIVISALVIGGLLIHGLWSVRKKSSDKVSKKEPNELKEQTPNHDKEPDEPEIGEMTFSAVDDEPATEGIIATEAPETEVQTESSGSEEAEPEENAIEPQDFIILHVEMPEGLKMAGSRLLPTVLSLGFKYSDEGFFNRHLEPSGNGPVLFRLVNMYNPGTFDIDNMEQFSTAGISLFMTLPCEGDNLAAFNMLHSASKKLAEEFGATVLDKDREPLTVEAVRGYVEKVREFAA
>CP031761.1|AXR03329.1|3381034_3384424_-|chromosome-segregation-protein-SMC
MRLSSIKLAGFKSFVEPTKIPFPDQMTCVVGPNGCGKSNVIDAVRWVLGESSAKNLRGDAMTDVIFNGSTKRKPISQASVELIFDNTQGRLPGTFADRNQIAIKRLVTRDGQSLYFLNGSKCRKRDITDIFLGTGLGPRSYAIIEQGMISRLIESKPQELRVFLEEAAGISKYKERRRETQTRIKSTRENMERLLDVRQELQGQLDKLALQAQQASEYKSLKSQERDLKSWIAILKWQSLEQKQAIKAKEIAKLNEKLAFFNEAHSGHDSILATLEHEIKHFNDGYEQAQHSVHRIETQLATLEQQKVNLTDKKRQLIEQSQILKSQQQEVIEAQDEQAEYVASSAEKVDEVSEQLEIALLQLEEIQLTNEQSDAEQTQLEAQFSSAQKQYQQIHAKVQQGASQLAQQQQAKLHIEKRLVELQEQAEAHRASMLENDLAEAQDAHHQLVQAMAKLQSQAGKLQSQEQANKEEILLAESHAQKALQALQEVQSEIKALSRWANEASETSATTMLSQLVVESGYEECVEAALLGLTHLVVEQSEINTLWPIELEVPCDSIATKISSGLFPSFLSKIKLCAEPTDFRSCEQFLLGVTKSGVIVGDNFKAKAKSNEESGALKRYAQLQSCHIQLSHLQKLAEEAEQVVAQKRIALEDTQACLLKTQQCVHEKAQAIASHKTKVEMLDENLSAWRELGQKIQEQLDIIAQERAEVIEQLELYTEQQLQRDELLAQAQETQQLAEAKLTEFKQHSQSRRAALQEAQQLVHTTKLTSQQAESELQLSNSKLEHLQHRHDEINQRIEQTQEDILLCEEPLAEAHEDIELLLAQHLEAKAQKQTMLDTLNQAKENLSQKQAALKDAQGEVSKLNASLQQVKLEEQSLMIKAQAALEPLQELGRTLKAELAQLPEDANLGQYQANLSRVSNDLGKLGAVNLAAIEEFEEAKARKTYLDTQLDDLTNALETLEAVIRKIDKETKTRFSATFNQVNEDLAELFPKVFGGGSAYLELTSDDLLESGVSIMARPPGKKNSTIHLLSGGEKALTALSLVFSIFRLNPAPFCMLDEVDAPLDDANVGRFCRLVEEMSQTVQFIYISHNKVAMEMAGRLTGVTMAEPGVSRMVAVDIEQAVQMAQA
>CP031761.1|AXR03330.1|3384488_3385250_-|RNA-methyltransferase
MVNPTFEVHMISKNQQKLLRALGQKKYRKQHGLYLVQGEKNVIELVDAGLAVEQLFATSEFMTKYKSKLVNIACVEAEEEVLSKVSTLVSNNAAIAVVAMPPTEEINTAGLVLALDGVSDPGNLGTIIRLADWYGLTQLVVSENCADQFNPKVISATMGSFVRVNVVRTDLEAFLQQYQGECYGAFLGGESVHQCQFSRNAVLVMGSESHGISDSIAAHINKKVTIPAFGGAESLNVAMATGIILDNIKRCHS
>CP031761.1|AXR03331.1|3385350_3385647_+|hypothetical-protein
MSPELTLILLNFILLFVAYVFVYPKLKEKSLASISKQDLLVTAVSLAVSGSLYYGKDIEFSLMFFESNWVVFTIVAFSVIEIPFLLWFKRRYNVKFGE
>CP031761.1|AXR03332.1|3385723_3386161_-|energy-transducer-TonB
MKVQLLISVLVAGTCWEAEAKTLHGDVKSTQLSPSIEASIWQKKGNSIPKYPPALAKRKLAGCTVLKVMIDADGKTEDIEQIASIPSKTLAKHAKQLIKSWQWSPIDTQHLGREEKLMRIDFCLGGADLANAQMRCEAQAKLDCE
>CP031761.1|AXR03333.1|3386257_3387265_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MSTAKSAVTVLGAGSYGTALAICFARNGHQVTLWGRNSEHVEALAAERKNQRYLPDIQFPNTLELEADLETAVKSSECILVVVPSHAFADTLKKIKPMLLENAKVAWATKGLEPNTGRLLQEVALDVLGDDVPLAVLSGPTFAKEMAAGLPTAISVSSICAKFREELAELLHCGRSFRVYSNEDFIGIQLGGAVKNVIAIGAGMSDGFGFGANARTALITRGLAELCRLGCALGARSETFMGMAGLGDLILTCTDNQSRNRRFGLALGTGKSVDEAMSSIGQVVEGYRNTKEVYLLAKRTGIEMPITEQIYQVLYEQKDVKEAAMALLGREKRAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
CP031761_2	2.1\|2673458\|57\|CP031761\|CRISPRCasFinder	2673458-2673514	57	CP031761.1	2677196-2677252	0	1.0
CP031761_3	3.2\|3374449\|71\|CP031761\|PILER-CR	3374449-3374519	71	CP031761.1	3374975-3375045	11	0.845
CP031761_3	3.2\|3374449\|71\|CP031761\|PILER-CR	3374449-3374519	71	CP031761.1	3375087-3375157	11	0.845
CP031761_3	3.4\|3374660\|71\|CP031761\|PILER-CR	3374660-3374730	71	CP031761.1	3374975-3375045	11	0.845
CP031761_3	3.4\|3374660\|71\|CP031761\|PILER-CR	3374660-3374730	71	CP031761.1	3375087-3375157	11	0.845

1. spacer 2.1|2673458|57|CP031761|CRISPRCasFinder matches to position: 2677196-2677252, mismatch: 0, identity: 1.0

gatcgcagggtgaacctgctcctactccgtgttgtaggagacgctttacgcggcgag	CRISPR spacer
gatcgcagggtgaacctgctcctactccgtgttgtaggagacgctttacgcggcgag	Protospacer
*********************************************************

2. spacer 3.2|3374449|71|CP031761|PILER-CR matches to position: 3374975-3375045, mismatch: 11, identity: 0.845

taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	CRISPR spacer
taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	Protospacer
************************************************************

3. spacer 3.2|3374449|71|CP031761|PILER-CR matches to position: 3375087-3375157, mismatch: 11, identity: 0.845

taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	CRISPR spacer
taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	Protospacer
************************************************************

4. spacer 3.4|3374660|71|CP031761|PILER-CR matches to position: 3374975-3375045, mismatch: 11, identity: 0.845

taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	CRISPR spacer
taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	Protospacer
************************************************************

5. spacer 3.4|3374660|71|CP031761|PILER-CR matches to position: 3375087-3375157, mismatch: 11, identity: 0.845

taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	CRISPR spacer
taactctattcaagagtataaattgaaacacaatttgggttgttagctcagttgggagag	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

711995 : 719768

Enterobacteria_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR01182.1\|711995_713111_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	6.2e-25	27.9
AXR01183.1\|713155_714424_+	UDP-N-acetyl-D-mannosamine dehydrogenase	NA	NA	NA	NA
AXR01184.1\|714428_715313_+	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	4.8e-97	57.8
AXR01185.1\|715309_715855_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.3e-49	54.1
AXR01186.1\|715868_716933_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.6e-97	52.5
AXR01187.1\|716933_717788_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.6e-41	36.4
AXR01188.1\|717806_719051_+	hypothetical protein	NA	NA	NA	NA
AXR01189.1\|719057_719768_+	glycosyltransferase	L7Y3U4	Megavirus	3.7e-07	22.4

DBSCAN-SWA_2

1215422 : 1299233

100

Vibrio_phage(18.75%)

plate,transposase,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR01576.1\|1215422_1219163_-\|tail	phage tail tape measure protein	A0A2I7S9D9	Vibrio_phage	1.1e-52	47.1
AXR01577.1\|1219226_1219973_-	hypothetical protein	NA	NA	NA	NA
AXR01578.1\|1219969_1220389_-	hypothetical protein	NA	NA	NA	NA
AXR01579.1\|1220388_1220817_-	DUF1320 domain-containing protein	A0A0C4UR02	Shigella_phage	1.1e-22	43.0
AXR01580.1\|1220820_1221246_-	hypothetical protein	NA	NA	NA	NA
AXR01581.1\|1221297_1222206_-\|head	head protein	C9DGP2	Escherichia_phage	2.2e-97	53.9
AXR03924.1\|1222205_1223327_-	phage scaffold protein	A0A0M5N0Q6	Ralstonia_phage	8.1e-41	33.7
AXR01582.1\|1223459_1224623_-	ATP-binding protein	NA	NA	NA	NA
AXR03925.1\|1224757_1225216_-	phage virion morphogenesis protein	A0A0C4UR01	Shigella_phage	1.3e-13	42.1
AXR01583.1\|1225320_1226652_-\|head	phage head morphogenesis protein	Q6QIB9	Burkholderia_phage	4.7e-64	46.5
AXR01584.1\|1226644_1228204_-	DUF935 domain-containing protein	A0A0C4UQR8	Shigella_phage	1.8e-118	44.3
AXR01585.1\|1228352_1229978_-	hypothetical protein	A0A0C4UR29	Shigella_phage	4.3e-200	64.7
AXR01586.1\|1229994_1230579_-	DUF3486 family protein	A0A0C4UQU5	Shigella_phage	1.9e-57	62.5
AXR01587.1\|1230581_1230884_-	hypothetical protein	NA	NA	NA	NA
AXR01588.1\|1230870_1231122_-	hypothetical protein	NA	NA	NA	NA
AXR01589.1\|1231108_1231423_-	DUF2730 family protein	NA	NA	NA	NA
AXR01590.1\|1231422_1231647_-	conjugal transfer protein TraR	NA	NA	NA	NA
AXR01591.1\|1231633_1232083_-	hypothetical protein	R9ZVQ5	Cellulophaga_phage	1.6e-08	34.8
AXR01592.1\|1232075_1232336_-	hypothetical protein	NA	NA	NA	NA
AXR01593.1\|1232328_1232916_-	secretion activator protein	A0A2I7S9B9	Vibrio_phage	9.1e-36	46.7
AXR01594.1\|1232991_1233486_-	hypothetical protein	NA	NA	NA	NA
AXR01595.1\|1233482_1234475_-	hypothetical protein	NA	NA	NA	NA
AXR01596.1\|1235151_1235664_+	hypothetical protein	NA	NA	NA	NA
AXR01597.1\|1235656_1235965_+	hypothetical protein	NA	NA	NA	NA
AXR01598.1\|1235969_1236377_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXR01599.1\|1236501_1236765_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXR01600.1\|1236821_1237199_+	hypothetical protein	NA	NA	NA	NA
AXR01601.1\|1237188_1237668_+	hypothetical protein	A0A0S4L5L2	Pseudomonas_phage	1.8e-13	32.2
AXR01602.1\|1237831_1238098_+	hypothetical protein	NA	NA	NA	NA
AXR01603.1\|1238094_1238400_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXR01604.1\|1238402_1239323_+	hypothetical protein	NA	NA	NA	NA
AXR01605.1\|1239319_1241101_+\|transposase	transposase	Q5ZR04	Pseudomonas_phage	1.1e-68	32.8
AXR01606.1\|1241104_1242253_+	hypothetical protein	Q5ZR05	Pseudomonas_phage	1.8e-27	26.4
AXR01607.1\|1242255_1242573_+	hypothetical protein	NA	NA	NA	NA
AXR01608.1\|1242585_1243215_+	DUF3164 family protein	A0A2D1GNM4	Pseudomonas_phage	1.3e-27	32.2
AXR01609.1\|1243225_1243699_+	regulatory protein GemA	NA	NA	NA	NA
AXR01610.1\|1243691_1244081_+	transcriptional regulator	NA	NA	NA	NA
AXR01611.1\|1244074_1244320_+	hypothetical protein	NA	NA	NA	NA
AXR01612.1\|1244309_1244501_+	hypothetical protein	NA	NA	NA	NA
AXR01613.1\|1244579_1244804_-	hypothetical protein	NA	NA	NA	NA
AXR01614.1\|1244978_1245257_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXR01615.1\|1245260_1245494_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXR01616.1\|1245937_1247395_-	sensor histidine kinase	W8CYF6	Bacillus_phage	6.0e-20	25.8
AXR01617.1\|1247391_1248123_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	6.0e-29	33.0
AXR01618.1\|1248175_1248883_-	hypothetical protein	NA	NA	NA	NA
AXR01619.1\|1248892_1249591_-	hypothetical protein	NA	NA	NA	NA
AXR01620.1\|1250149_1252117_-	amine oxidoreductase	M1NNK7	Moumouvirus	3.5e-07	32.4
AXR01621.1\|1252658_1253828_-	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	1.3e-81	42.3
AXR01622.1\|1253941_1254538_-	DUF1190 domain-containing protein	NA	NA	NA	NA
AXR01623.1\|1254547_1254952_-	DUF350 domain-containing protein	NA	NA	NA	NA
AXR01624.1\|1254996_1255362_-	PilZ domain-containing protein	NA	NA	NA	NA
AXR01625.1\|1255589_1257254_-	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	9.5e-38	26.4
AXR01626.1\|1257678_1257957_+	XRE family transcriptional regulator	NA	NA	NA	NA
AXR01627.1\|1257931_1258294_+	hypothetical protein	NA	NA	NA	NA
AXR01628.1\|1258314_1258734_+	glycoside hydrolase	A0A1Q1PW74	Pseudoalteromonas_phage	2.4e-30	52.9
AXR01629.1\|1258721_1259129_+	hypothetical protein	A0A1B1ITB4	uncultured_Mediterranean_phage	9.8e-21	41.4
AXR01630.1\|1259125_1259374_+	hypothetical protein	NA	NA	NA	NA
AXR01631.1\|1259434_1260277_+\|plate	baseplate protein	K4HZB7	Acidithiobacillus_phage	1.7e-35	37.8
AXR01632.1\|1260285_1261182_+\|tail	phage tail protein I	M1T2R2	Escherichia_phage	1.0e-22	35.6
AXR01633.1\|1261348_1261933_+\|tail	phage tail protein	B0ZSG1	Halomonas_phage	3.3e-22	38.1
AXR01634.1\|1261942_1262719_+\|tail	phage tail protein	NA	NA	NA	NA
AXR01635.1\|1262729_1263044_+	hypothetical protein	NA	NA	NA	NA
AXR01636.1\|1263170_1263941_+	hypothetical protein	NA	NA	NA	NA
AXR01637.1\|1263952_1264417_+	hypothetical protein	NA	NA	NA	NA
AXR01638.1\|1264476_1265433_+\|plate	baseplate protein	A0A088FQL4	Escherichia_phage	1.0e-52	38.2
AXR01639.1\|1265413_1266160_+\|tail	phage tail protein I	A0A2H4EUL3	Aeromonas_phage	3.1e-20	44.6
AXR01640.1\|1266221_1266758_+\|tail	phage tail protein	B0ZSG1	Halomonas_phage	7.6e-21	40.3
AXR01641.1\|1266759_1267650_+	hypothetical protein	NA	NA	NA	NA
AXR01642.1\|1267661_1267889_+	hypothetical protein	NA	NA	NA	NA
AXR01643.1\|1267897_1268740_+\|plate	baseplate assembly protein	K4HZB7	Acidithiobacillus_phage	4.3e-47	43.4
AXR01644.1\|1268741_1269668_+\|tail	phage tail protein	K4I1F8	Acidithiobacillus_phage	3.4e-37	46.5
AXR01645.1\|1269694_1270243_+	hypothetical protein	A2I2X8	Vibrio_virus	6.6e-20	36.9
AXR01646.1\|1270246_1271491_+	hypothetical protein	A0A2I7R0J0	Vibrio_phage	2.3e-36	48.4
AXR01647.1\|1271442_1273329_+	hypothetical protein	A0A2I7R0J0	Vibrio_phage	2.5e-58	32.1
AXR01648.1\|1273321_1274044_+	hypothetical protein	NA	NA	NA	NA
AXR01649.1\|1274105_1274588_+	hypothetical protein	Q75QL7	Wolbachia_phage	6.6e-24	41.9
AXR01650.1\|1276558_1277755_+	hypothetical protein	A0A1B2LRR4	Wolbachia_phage	3.8e-89	45.6
AXR01651.1\|1277763_1277985_+	hypothetical protein	NA	NA	NA	NA
AXR01652.1\|1278005_1279475_+	hypothetical protein	NA	NA	NA	NA
AXR01653.1\|1279484_1279904_+	hypothetical protein	NA	NA	NA	NA
AXR03926.1\|1280067_1280973_+\|plate	baseplate J protein	D4HTV3	Vibrio_phage	9.4e-48	35.2
AXR01654.1\|1284991_1285330_+	hypothetical protein	NA	NA	NA	NA
AXR01655.1\|1285322_1285862_+	hypothetical protein	NA	NA	NA	NA
AXR01656.1\|1286045_1286930_+\|plate	baseplate J family protein	D4HTV3	Vibrio_phage	2.3e-54	42.1
AXR01657.1\|1286922_1288032_+\|tail	phage tail protein I	K7R2P6	Vibrio_phage	3.6e-41	46.2
AXR01658.1\|1288031_1288784_+\|tail	phage tail protein	K7RVY3	Vibrio_phage	4.4e-43	51.6
AXR01659.1\|1288793_1289621_+	hypothetical protein	NA	NA	NA	NA
AXR01660.1\|1289623_1289851_+	hypothetical protein	NA	NA	NA	NA
AXR01661.1\|1289929_1290508_+	hypothetical protein	NA	NA	NA	NA
AXR01662.1\|1290504_1291098_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	3.3e-25	39.9
AXR01663.1\|1291194_1291392_+	hypothetical protein	D4HTV1	Vibrio_phage	1.8e-12	62.5
AXR01664.1\|1291401_1291737_+\|plate	baseplate assembly protein W	Q75QM0	Wolbachia_phage	2.0e-27	50.5
AXR01665.1\|1291966_1292164_+	hypothetical protein	NA	NA	NA	NA
AXR01666.1\|1292186_1293350_+\|tail	phage tail protein	A0A1B2LRR3	Wolbachia_phage	2.3e-131	60.4
AXR01667.1\|1293349_1293859_+\|tail	phage major tail tube protein	K4I1G5	Acidithiobacillus_phage	1.1e-34	47.9
AXR01668.1\|1293862_1294120_+\|tail	phage tail assembly protein	Q75QK8	Wolbachia_phage	3.1e-12	43.8
AXR01669.1\|1294375_1297534_+\|tail	phage tail protein	NA	NA	NA	NA
AXR01670.1\|1297548_1297980_+	hypothetical protein	Q9ZXJ9	Pseudomonas_virus	1.5e-16	38.5
AXR01671.1\|1298005_1298221_+\|tail	phage tail protein	O80307	Escherichia_phage	6.3e-11	51.7
AXR01672.1\|1298222_1299233_+\|tail	phage tail protein	A0A1B2LRT8	Wolbachia_phage	3.8e-29	25.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031761

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection