CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP030131	Klebsiella pneumoniae strain 160111 plasmid p5.6K_L111, complete sequence	0 crisprs	NA	0
CP030135	Klebsiella pneumoniae strain 160111 plasmid pOXA48_L111, complete sequence	0 crisprs	RT	0
CP030130	Klebsiella pneumoniae strain 160111 plasmid p10K_L111, complete sequence	0 crisprs	NA	0
CP030134	Klebsiella pneumoniae strain 160111 plasmid pKPC2_L111, complete sequence	0 crisprs	RT	1
CP030132	Klebsiella pneumoniae strain 160111 plasmid pIncAC2_L111, complete sequence	0 crisprs	RT,DEDDh	2
CP030133	Klebsiella pneumoniae strain 160111 plasmid pIncFII_L111, complete sequence	0 crisprs	NA	1
CP029689	Klebsiella pneumoniae strain 160111 chromosome, complete genome	2 crisprs	DEDDh,RT,csa3,cas3,WYL,DinG	13

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3742 : 17560

Enterobacteria_phage(18.18%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR54314.1\|3742_4735_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.4e-185	99.4
AXR54354.1\|5248_5644_+	hypothetical protein	NA	NA	NA	NA
AXR54315.1\|5640_6252_+	DUF2913 family protein	NA	NA	NA	NA
AXR54316.1\|6248_7199_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	6.6e-76	55.6
AXR54317.1\|7345_7546_-	hypothetical protein	NA	NA	NA	NA
AXR54318.1\|7599_8232_-	LacI family DNA-binding transcriptional regulator	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
AXR54319.1\|8594_9800_+	ParA family protein	Q1MVJ3	Enterobacteria_phage	1.1e-205	89.2
AXR54320.1\|9796_10768_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	1.4e-113	68.9
AXR54321.1\|10903_12175_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	6.1e-154	63.0
AXR54322.1\|12174_12597_-	peptidase	A0A1W6JNS2	Morganella_phage	3.1e-30	51.5
AXR54323.1\|12776_13448_-	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	5.1e-83	61.7
AXR54324.1\|13806_14484_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.9
AXR54325.1\|14483_14705_+	hypothetical protein	NA	NA	NA	NA
AXR54326.1\|14715_15135_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXR54327.1\|15188_15968_+	hypothetical protein	NA	NA	NA	NA
AXR54328.1\|16372_16879_+	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	4.8e-09	31.8
AXR54329.1\|16921_17113_+	hypothetical protein	NA	NA	NA	NA
AXR54330.1\|17299_17560_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	4.1e-12	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP030132

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16870 : 48111

Escherichia_phage(20.0%)

tail,transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR54103.1\|16870_17488_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
AXR54104.1\|17543_18200_-	hypothetical protein	NA	NA	NA	NA
AXR54105.1\|18199_19627_-	DNA cytosine methyltransferase	NA	NA	NA	NA
AXR54106.1\|19630_20131_-	hypothetical protein	I3UMJ0	Colwellia_phage	9.5e-18	38.4
AXR54107.1\|20139_20472_-	hypothetical protein	NA	NA	NA	NA
AXR54108.1\|20456_20888_-	hypothetical protein	NA	NA	NA	NA
AXR54109.1\|20955_21630_-	thymidylate kinase	NA	NA	NA	NA
AXR54110.1\|21604_21886_-	hypothetical protein	NA	NA	NA	NA
AXR54111.1\|21878_22256_-	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	1.7e-22	49.6
AXR54112.1\|22817_23453_+	restriction endonuclease subunit M	NA	NA	NA	NA
AXR54113.1\|23505_23778_-	hypothetical protein	NA	NA	NA	NA
AXR54114.1\|23826_25008_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
AXR54115.1\|25011_25797_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
AXR54116.1\|25970_26282_-	hypothetical protein	NA	NA	NA	NA
AXR54117.1\|26588_27404_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AXR54118.1\|27464_28268_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AXR54119.1\|28267_29104_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AXR54120.1\|29518_30379_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AXR54121.1\|31199_32570_-\|transposase	IS1182-like element ISCfr1 family transposase	NA	NA	NA	NA
AXR54122.1\|32684_33821_-	DUF3883 domain-containing protein	NA	NA	NA	NA
AXR54123.1\|33871_34117_-	hypothetical protein	NA	NA	NA	NA
AXR54124.1\|34122_34314_+	hypothetical protein	NA	NA	NA	NA
AXR54125.1\|34795_35338_-	tunicamycin resistance protein	NA	NA	NA	NA
AXR54126.1\|35350_36211_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
AXR54127.1\|36431_36785_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	9.9e-62	100.0
AXR54128.1\|36821_37526_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
AXR54129.1\|37559_37862_-\|transposase	transposase	NA	NA	NA	NA
AXR54130.1\|38959_39457_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AXR54131.1\|39568_39859_+	DUF1010 domain-containing protein	NA	NA	NA	NA
AXR54132.1\|39864_40656_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AXR54133.1\|40819_41167_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXR54134.1\|41160_42132_+	dihydropteroate synthase	NA	NA	NA	NA
AXR54135.1\|42348_43563_+	chloramphenicol/florfenicol efflux MFS transporter FloR2	S4TR35	Salmonella_phage	9.8e-16	23.7
AXR54136.1\|43590_43773_+	DUF3363 domain-containing protein	NA	NA	NA	NA
AXR54137.1\|43769_44396_-	TetR family transcriptional regulator	NA	NA	NA	NA
AXR54138.1\|44499_45675_+	tetracycline efflux MFS transporter Tet(G)	NA	NA	NA	NA
AXR54139.1\|45695_46487_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXR54140.1\|46578_48111_-\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

92754 : 144772

Salmonella_phage(31.58%)

transposase,integrase

attL 111201:111260|attR 144991:146356

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR54199.1\|92754_93678_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXR54200.1\|93666_94104_+	hypothetical protein	A0A1B0VDR3	Salmonella_phage	4.5e-40	100.0
AXR54201.1\|94353_95229_+	class A extended-spectrum beta-lactamase CTX-M-14	A0A1B0VBP7	Salmonella_phage	6.1e-153	99.6
AXR54202.1\|95308_96232_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXR54203.1\|98590_99505_-	DNA replication terminus site-binding protein	NA	NA	NA	NA
AXR54204.1\|99831_100323_-	hypothetical protein	NA	NA	NA	NA
AXR54205.1\|100319_101189_-	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.5e-23	35.1
AXR54206.1\|101193_102204_-\|integrase	integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
AXR54207.1\|102206_102743_-	hypothetical protein	NA	NA	NA	NA
AXR54208.1\|102735_103023_-	hypothetical protein	NA	NA	NA	NA
AXR54209.1\|103041_103362_-	hypothetical protein	NA	NA	NA	NA
AXR54210.1\|103584_104187_+	hypothetical protein	NA	NA	NA	NA
AXR54211.1\|104202_104655_-	hypothetical protein	NA	NA	NA	NA
AXR54212.1\|104825_105266_-	hypothetical protein	NA	NA	NA	NA
AXR54213.1\|105237_109491_-	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.1e-18	47.6
AXR54302.1\|109445_109649_+	hypothetical protein	NA	NA	NA	NA
AXR54214.1\|109623_110349_-	hypothetical protein	NA	NA	NA	NA
AXR54215.1\|110462_110864_-	hypothetical protein	NA	NA	NA	NA
111201:111260	attL	NA	NA	NA	NA
AXR54216.1\|111478_112483_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXR54217.1\|112561_115534_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
AXR54218.1\|115536_116094_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
AXR54219.1\|116131_116455_-\|transposase	transposase	NA	NA	NA	NA
AXR54220.1\|116399_117413_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXR54303.1\|117731_118286_+	aminoglycoside N-acetyltransferase AAC(6')-Ib9	NA	NA	NA	NA
AXR54221.1\|118380_119013_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
AXR54222.1\|119081_119882_+	oxacillin-hydrolyzing class D beta-lactamase OXA-10	NA	NA	NA	NA
AXR54223.1\|120121_120937_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.5
AXR54224.1\|121000_121705_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXR54225.1\|122092_123106_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXR54226.1\|123261_123735_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
AXR54227.1\|123845_124298_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
AXR54304.1\|124618_125878_+	chloramphenicol efflux MFS transporter CmlA5	S4TR35	Salmonella_phage	1.7e-26	31.7
AXR54228.1\|126142_126943_+	oxacillin-hydrolyzing class D beta-lactamase OXA-10	NA	NA	NA	NA
AXR54305.1\|126959_127751_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AXR54229.1\|127914_128262_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXR54230.1\|128255_129095_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXR54231.1\|129499_131041_+\|transposase	IS91 family transposase	NA	NA	NA	NA
AXR54232.1\|132121_133261_-	class C beta-lactamase DHA-1	NA	NA	NA	NA
AXR54233.1\|133371_134247_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXR54306.1\|134250_134616_-	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
AXR54307.1\|134508_134844_+	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA
AXR54234.1\|134837_135677_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXR54235.1\|135606_135786_-	hypothetical protein	NA	NA	NA	NA
AXR54236.1\|135804_136305_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
AXR54237.1\|136273_137266_-\|transposase	transposase	NA	NA	NA	NA
AXR54238.1\|137268_138984_-\|transposase	transposase	NA	NA	NA	NA
AXR54239.1\|139022_139730_-	EAL domain-containing protein	NA	NA	NA	NA
AXR54240.1\|139726_139963_-	mercury resistance protein	NA	NA	NA	NA
AXR54241.1\|139959_140322_-	transcriptional regulator	NA	NA	NA	NA
AXR54242.1\|140339_142034_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AXR54308.1\|142085_142508_-	mercury transport protein MerC	NA	NA	NA	NA
AXR54243.1\|142543_142819_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AXR54244.1\|142832_143183_-	mercuric ion transporter MerT	NA	NA	NA	NA
AXR54245.1\|143254_143689_+	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AXR54246.1\|143767_144772_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
144991:146356	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP030134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

743 : 42579

Escherichia_phage(42.11%)

integrase,transposase

attL 11420:11434|attR 31965:31979

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR54357.1\|743_1448_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
AXR54358.1\|1958_2834_+	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
AXR54359.1\|2913_3837_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXR54360.1\|5587_6292_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXR54361.1\|7530_7809_+	hypothetical protein	NA	NA	NA	NA
AXR54362.1\|7919_8345_+	antirestriction protein	A0A2D0W8Z5	Bordetella_virus	5.3e-17	37.3
AXR54363.1\|8673_8970_+	transcriptional repressor protein KorC	NA	NA	NA	NA
AXR54364.1\|10204_11086_-	carbapenem-hydrolyzing class A beta-lactamase KPC-2	A0A1B0VBP7	Salmonella_phage	2.2e-73	52.2
AXR54365.1\|11361_12342_-\|transposase	IS481-like element ISKpn27 family transposase	A8RHK4	Spiroplasma_virus	2.9e-10	27.4
11420:11434	attL	NA	NA	NA	NA
AXR54366.1\|12464_12938_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	3.3e-76	99.3
AXR54367.1\|12977_13682_-\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXR54368.1\|14993_15701_-	EAL domain-containing protein	NA	NA	NA	NA
AXR54369.1\|15697_15934_-	mercury resistance protein	NA	NA	NA	NA
AXR54370.1\|15930_16293_-	transcriptional regulator	NA	NA	NA	NA
AXR54371.1\|16310_18005_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AXR54426.1\|18056_18479_-	mercury transport protein MerC	NA	NA	NA	NA
AXR54372.1\|18514_18790_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AXR54373.1\|18803_19154_-	mercuric ion transporter MerT	NA	NA	NA	NA
AXR54374.1\|19225_19660_+	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AXR54375.1\|19738_20743_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
AXR54376.1\|22276_23299_-	DNA helicase UvrD	NA	NA	NA	NA
AXR54377.1\|23283_24846_-	ATP-dependent endonuclease	NA	NA	NA	NA
AXR54378.1\|24919_25336_-	PIN domain-containing protein	NA	NA	NA	NA
AXR54379.1\|25332_25563_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AXR54380.1\|25546_25981_+	hypothetical protein	NA	NA	NA	NA
AXR54381.1\|26141_27086_+	hypothetical protein	NA	NA	NA	NA
AXR54427.1\|27164_27515_+	hypothetical protein	NA	NA	NA	NA
AXR54382.1\|27572_28094_+	hypothetical protein	NA	NA	NA	NA
AXR54383.1\|28139_28343_+	hypothetical protein	NA	NA	NA	NA
AXR54384.1\|28372_29377_+	hypothetical protein	NA	NA	NA	NA
AXR54385.1\|29560_30340_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
AXR54386.1\|30385_30643_-	hypothetical protein	NA	NA	NA	NA
AXR54387.1\|31420_32287_+	RepB family plasmid replication initiator protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
31965:31979	attR	NA	NA	NA	NA
AXR54388.1\|33395_34601_+	ParA family protein	A0A077SL49	Escherichia_phage	5.3e-163	69.3
AXR54389.1\|34597_35575_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.8
AXR54390.1\|35656_36928_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	7.5e-152	63.7
AXR54391.1\|36927_37359_-	peptidase	A0A1W6JNS2	Morganella_phage	2.1e-29	53.3
AXR54392.1\|37518_37770_+	hypothetical protein	NA	NA	NA	NA
AXR54393.1\|37769_39254_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR54394.1\|39502_40474_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.1e-73	46.8
AXR54395.1\|40476_41148_+	Mediator of plasmid stability	NA	NA	NA	NA
AXR54396.1\|41210_41441_+	hypothetical protein	NA	NA	NA	NA
AXR54397.1\|41877_42579_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-26	36.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP029689

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP029689_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029689_1

3061941-3062026

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029689_1

>merge|CP029689|1|3061941-3062026|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>CP029689|1|1|3061941-3062026|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
CP029689.1\|AXR51656.1\|3074973_3075819_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
CP029689.1\|AXR51647.1\|3062123_3063488_+\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP029689.1\|AXR51637.1\|3051490_3051694_+\|hypothetical-protein	unknown	unknown	unknown
CP029689.1\|AXR51651.1\|3064953_3067860_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP029689.1\|AXR51649.1\|3063667_3064207_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP029689.1\|AXR51639.1\|3052499_3052877_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP029689.1\|AXR51641.1\|3053697_3054687_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP029689.1\|AXR51653.1\|3070580_3071276_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP029689.1\|AXR51642.1\|3054692_3055979_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP029689.1\|AXR51644.1\|3058625_3059453_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP029689.1\|AXR51640.1\|3052879_3053701_-\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP029689.1\|AXR51650.1\|3064281_3064941_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP029689.1\|AXR51654.1\|3071413_3072916_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP029689.1\|AXR51648.1\|3063516_3063705_-\|hypothetical-protein	unknown	unknown	unknown
CP029689.1\|AXR51655.1\|3072926_3074636_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP029689.1\|AXR51646.1\|3060173_3061799_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP029689.1\|AXR51638.1\|3051646_3052495_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP029689.1\|AXR51645.1\|3059485_3060184_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP029689.1\|AXR51643.1\|3056033_3058382_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP029689.1\|AXR51652.1\|3068047_3070405_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595

Protein	Function_ID	Function_description	E-value
CP029689.1\|AXR51656.1\|3074973_3075819_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
CP029689.1\|AXR51647.1\|3062123_3063488_+\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP029689.1\|AXR51651.1\|3064953_3067860_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP029689.1\|AXR51649.1\|3063667_3064207_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
CP029689.1\|AXR51639.1\|3052499_3052877_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP029689.1\|AXR51641.1\|3053697_3054687_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP029689.1\|AXR51653.1\|3070580_3071276_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP029689.1\|AXR51642.1\|3054692_3055979_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP029689.1\|AXR51644.1\|3058625_3059453_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP029689.1\|AXR51640.1\|3052879_3053701_-\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP029689.1\|AXR51650.1\|3064281_3064941_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP029689.1\|AXR51654.1\|3071413_3072916_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP029689.1\|AXR51655.1\|3072926_3074636_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP029689.1\|AXR51646.1\|3060173_3061799_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
CP029689.1\|AXR51638.1\|3051646_3052495_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP029689.1\|AXR51645.1\|3059485_3060184_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP029689.1\|AXR51643.1\|3056033_3058382_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP029689.1\|AXR51652.1\|3068047_3070405_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0

>CP029689.1|AXR51646.1|3060173_3061799_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>CP029689.1|AXR51645.1|3059485_3060184_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP029689.1|AXR51644.1|3058625_3059453_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP029689.1|AXR51643.1|3056033_3058382_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP029689.1|AXR51642.1|3054692_3055979_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP029689.1|AXR51641.1|3053697_3054687_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP029689.1|AXR51640.1|3052879_3053701_-|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP029689.1|AXR51639.1|3052499_3052877_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP029689.1|AXR51638.1|3051646_3052495_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP029689.1|AXR51637.1|3051490_3051694_+|hypothetical-protein
MFPVAGFVFFLKRSPGRQIAHKRRSGKALAATRQNDAAGSPDKAQRAAIREESGRDGFAFVEAFLPV
>CP029689.1|AXR51647.1|3062123_3063488_+|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP029689.1|AXR51648.1|3063516_3063705_-|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKYDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP029689.1|AXR51649.1|3063667_3064207_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>CP029689.1|AXR51650.1|3064281_3064941_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP029689.1|AXR51651.1|3064953_3067860_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>CP029689.1|AXR51652.1|3068047_3070405_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP029689.1|AXR51653.1|3070580_3071276_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP029689.1|AXR51654.1|3071413_3072916_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP029689.1|AXR51655.1|3072926_3074636_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>CP029689.1|AXR51656.1|3074973_3075819_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE

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Crispr_ID: CP029689_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP029689_2

3885801-3885878

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP029689_2

>merge|CP029689|2|3885801-3885878|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>CP029689|2|2|3885801-3885878|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
CP029689.1\|AXR52364.1\|3888080_3889121_+\|biotin-synthase	unknown	unknown	gnl\|CDD\|185063
CP029689.1\|AXR52367.1\|3891006_3891729_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
CP029689.1\|AXR52368.1\|3891670_3892393_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
CP029689.1\|AXR52356.1\|3875919_3877203_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
CP029689.1\|AXR52365.1\|3889117_3890275_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP029689.1\|AXR52370.1\|3893103_3895125_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP029689.1\|AXR53995.1\|3886577_3887867_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
CP029689.1\|AXR52355.1\|3874300_3875224_-\|acyltransferase	unknown	unknown	gnl\|CDD\|225813
CP029689.1\|AXR53994.1\|3877459_3878677_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
CP029689.1\|AXR52366.1\|3890258_3891014_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
CP029689.1\|AXR53996.1\|3892691_3892871_-\|hypothetical-protein	unknown	unknown	unknown
CP029689.1\|AXR52369.1\|3892479_3892692_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	unknown
CP029689.1\|AXR52360.1\|3882244_3883771_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
CP029689.1\|AXR52359.1\|3880559_3882248_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
CP029689.1\|AXR52362.1\|3885497_3885767_-\|hypothetical-protein	unknown	unknown	unknown
CP029689.1\|AXR52354.1\|3873777_3874284_+\|hypothetical-protein	unknown	unknown	unknown
CP029689.1\|AXR52357.1\|3878673_3879630_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
CP029689.1\|AXR52361.1\|3883869_3885252_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
CP029689.1\|AXR52358.1\|3879691_3880417_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
CP029689.1\|AXR52363.1\|3886030_3886507_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339

Protein	Function_ID	Function_description	E-value
CP029689.1\|AXR52364.1\|3888080_3889121_+\|biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
CP029689.1\|AXR52367.1\|3891006_3891729_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
CP029689.1\|AXR52356.1\|3875919_3877203_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP029689.1\|AXR52370.1\|3893103_3895125_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP029689.1\|AXR52368.1\|3891670_3892393_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
CP029689.1\|AXR53995.1\|3886577_3887867_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
CP029689.1\|AXR52365.1\|3889117_3890275_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP029689.1\|AXR52363.1\|3886030_3886507_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
CP029689.1\|AXR52366.1\|3890258_3891014_+\|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
CP029689.1\|AXR52360.1\|3882244_3883771_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
CP029689.1\|AXR52359.1\|3880559_3882248_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
CP029689.1\|AXR52358.1\|3879691_3880417_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
CP029689.1\|AXR53994.1\|3877459_3878677_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
CP029689.1\|AXR52357.1\|3878673_3879630_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	8.10638e-178
CP029689.1\|AXR52361.1\|3883869_3885252_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
CP029689.1\|AXR52355.1\|3874300_3875224_-\|acyltransferase	gnl\|CDD\|225813	COG3274, COG3274, Predicted O-acyltransferase [General function prediction only].	6.63632e-09

>CP029689.1|AXR52362.1|3885497_3885767_-|hypothetical-protein
MAAKHGAAETAGAGGLNIAETFPEGRGSPHGCGLRAVFCKDAASARPEACRDKSKAPRSGDVAGRSPGVQGAAATGRPLCAPCSMRNIT
>CP029689.1|AXR52361.1|3883869_3885252_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>CP029689.1|AXR52360.1|3882244_3883771_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLTRLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>CP029689.1|AXR52359.1|3880559_3882248_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIACAAEQGLNLPMVAATQGNAK
>CP029689.1|AXR52358.1|3879691_3880417_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>CP029689.1|AXR52357.1|3878673_3879630_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIVRAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRVGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRNGKLQAVDLVEFNPLFDIDGQGARAAARLAWQIAHWWR
>CP029689.1|AXR53994.1|3877459_3878677_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>CP029689.1|AXR52356.1|3875919_3877203_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATIGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>CP029689.1|AXR52355.1|3874300_3875224_-|acyltransferase
MTAVTFFTIYNTWDRFDYDYHWILGLLTFISTIATPLFFVVAGYLDAQTRHDANWQIGKIKSVVIVFLFWVTVYYVWEPYQRGYLIQPWFIFALIVIYTFHPLIAWLSQRRGLFFAVLLTLLCCSYGYDLLSVIYPDRHLFSLPPQYRLWTWLLFYLTGQLFNDPKVAEWIRNPQVIKGSIIALPFVYLFTWFYERHFFFALFKADRNAFILTGSQIYILIVLLVIAANAVQFKKNREWKEAVLATVSKAMTGVYILHYSVFHLLVMLIPVHSLATKLGVIALTFVLSVLISLAALSSTLLRKVITL
>CP029689.1|AXR52354.1|3873777_3874284_+|hypothetical-protein
MRGKSVMLLAGLASLAQANELNLYSVNTGSYVYHLTNNHGQYTENFENHFFSVERKFSADSKYSLLLGTMNNSFNDRCLALGVRRDWYHSGSGWTFKGVYGYTGEFFFDAFEHCGDHGSYKDFKDATGIGFSPYIYHAIQYNFTDYFAVESGIIIPSVFVISIQWSFR
>CP029689.1|AXR52363.1|3886030_3886507_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>CP029689.1|AXR53995.1|3886577_3887867_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVTAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMAALQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>CP029689.1|AXR52364.1|3888080_3889121_+|biotin-synthase
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>CP029689.1|AXR52365.1|3889117_3890275_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALVDWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGKVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>CP029689.1|AXR52366.1|3890258_3891014_+|malonyl-[acyl-carrier-protein]-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>CP029689.1|AXR52367.1|3891006_3891729_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>CP029689.1|AXR52368.1|3891670_3892393_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>CP029689.1|AXR52369.1|3892479_3892692_-|dTDP-4-dehydrorhamnose-reductase
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>CP029689.1|AXR53996.1|3892691_3892871_-|hypothetical-protein
MKLLWQQMTLFLHPLILSNKLIFKIFKEKTPFAPIQPQAAYALACRRFSNSNTQGYPQE
>CP029689.1|AXR52370.1|3893103_3895125_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

371397 : 387143

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR49172.1\|371397_372729_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.9e-15	29.1
AXR49173.1\|372718_373552_-	ABC transporter permease	NA	NA	NA	NA
AXR49174.1\|373580_374411_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
AXR49175.1\|374497_375052_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
AXR49176.1\|375066_375957_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
AXR49177.1\|375988_376858_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	5.7e-111	67.0
AXR49178.1\|376871_377936_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
AXR49179.1\|378775_379780_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	4.0e-31	29.2
AXR49180.1\|380728_381895_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
AXR49181.1\|382074_382629_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
AXR49182.1\|382643_383534_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
AXR49183.1\|383565_384435_-	glucose-1-phosphate thymidylyltransferase	I7I009	Enterobacteria_phage	3.4e-111	67.4
AXR49184.1\|384448_385513_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	54.7
AXR49185.1\|385736_387143_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.6e-38	28.7

DBSCAN-SWA_2

427878 : 434784

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR49212.1\|427878_429357_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
AXR49213.1\|429353_430076_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AXR49214.1\|430394_431756_+	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AXR53849.1\|432001_432895_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AXR49215.1\|433136_433910_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AXR53850.1\|433920_434784_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

DBSCAN-SWA_3

744437 : 818923

Salmonella_phage(35.59%)

transposase,protease,tail,holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR49481.1\|744437_745901_+\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
AXR49482.1\|745910_746270_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
AXR49483.1\|746397_747309_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
AXR49484.1\|747305_748007_-	DnaA inactivator Hda	NA	NA	NA	NA
AXR49485.1\|748105_749392_-	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
AXR49486.1\|749487_750114_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
AXR49487.1\|750332_751766_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AXR49488.1\|751775_752669_-	beta-glucoside kinase	NA	NA	NA	NA
AXR49489.1\|752932_753970_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
AXR49490.1\|753966_754608_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
AXR49491.1\|754788_756849_+	polyphosphate kinase 1	NA	NA	NA	NA
AXR49492.1\|756852_758385_+	exopolyphosphatase	NA	NA	NA	NA
AXR49493.1\|758438_760667_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
AXR49494.1\|761019_761211_+	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
AXR49495.1\|761307_762195_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXR49496.1\|762292_763525_+	MFS transporter	NA	NA	NA	NA
AXR49497.1\|763818_764997_+	anaerobic sulfatase maturase	NA	NA	NA	NA
AXR49498.1\|764980_766849_+	phosphatase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
AXR49499.1\|767035_767536_-	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
AXR49500.1\|767532_768162_-	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.8e-90	76.9
AXR49501.1\|768151_768457_-\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
AXR49502.1\|768443_768848_-	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
AXR49503.1\|768934_770251_-	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
AXR49504.1\|770328_770469_+	ABC transporter	NA	NA	NA	NA
AXR49505.1\|771359_772622_+\|transposase	IS1380 family transposase ISEc9	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
AXR49506.1\|773490_774471_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.5e-184	98.5
AXR53866.1\|774509_774596_-	ABC transporter	NA	NA	NA	NA
AXR49507.1\|774584_775718_+	hypothetical protein	NA	NA	NA	NA
AXR49508.1\|775758_776022_-	hypothetical protein	NA	NA	NA	NA
AXR49509.1\|776034_776946_-	hypothetical protein	A0A0A8J9B0	Klebsiella_phage	5.6e-16	31.2
AXR49510.1\|776944_777925_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXR49511.1\|780049_780346_+	hypothetical protein	T1SA06	Salmonella_phage	6.9e-24	63.9
AXR49512.1\|780444_780597_+	transmembrane anchored protein	G9L6D9	Escherichia_phage	2.5e-14	83.7
AXR49513.1\|780631_780826_-	hypothetical protein	Q858F7	Salmonella_phage	6.5e-15	67.2
AXR49514.1\|780822_783579_-	hypothetical protein	Q858F8	Salmonella_phage	0.0e+00	95.4
AXR49515.1\|783578_785489_-	hypothetical protein	Q858F9	Salmonella_phage	5.4e-287	82.7
AXR49516.1\|785488_788023_-	hypothetical protein	Q858G0	Salmonella_phage	0.0e+00	84.1
AXR49517.1\|788033_788573_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	8.0e-71	80.0
AXR49518.1\|788572_789037_-	hypothetical protein	Q858G2	Salmonella_phage	1.5e-70	81.2
AXR49519.1\|789036_791514_-	hypothetical protein	Q858G3	Salmonella_phage	0.0e+00	84.4
AXR49520.1\|791513_792119_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	4.0e-87	77.0
AXR49521.1\|792118_792442_-	hypothetical protein	G9L6C8	Escherichia_phage	5.3e-46	85.0
AXR49522.1\|792492_792834_-	hypothetical protein	G9L6C7	Escherichia_phage	2.4e-36	70.8
AXR49523.1\|792844_793282_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.3e-66	91.7
AXR49524.1\|793335_794322_-	hypothetical protein	A0A193GZ49	Enterobacter_phage	2.5e-179	94.2
AXR49525.1\|794336_795017_-	peptidase	G9L6C4	Escherichia_phage	6.1e-76	84.0
AXR49526.1\|795019_795316_-	hypothetical protein	T1SBI9	Salmonella_phage	1.2e-33	70.4
AXR49527.1\|795312_796995_-\|tail	phage tail protein	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	1.5e-264	84.4
AXR49528.1\|797009_797216_-	hypothetical protein	T1SA67	Salmonella_phage	4.8e-08	88.2
AXR49529.1\|797677_797920_-	hypothetical protein	NA	NA	NA	NA
AXR49530.1\|797969_798341_+	hypothetical protein	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	3.7e-59	91.9
AXR49531.1\|798384_799860_-\|terminase	terminase	Q858H3	Salmonella_phage	6.4e-280	93.1
AXR49532.1\|799856_800441_-\|terminase	terminase small subunit	T1SBI8	Salmonella_phage	2.2e-90	88.6
AXR53867.1\|800518_800776_-	lF-82	NA	NA	NA	NA
AXR49533.1\|800928_801180_+	hypothetical protein	NA	NA	NA	NA
AXR49534.1\|801179_802664_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR49535.1\|802760_803099_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
AXR53868.1\|803091_803295_-	hypothetical protein	NA	NA	NA	NA
AXR49536.1\|803294_803915_-	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
AXR49537.1\|803911_804205_-	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
AXR53869.1\|804204_804672_-	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
AXR49538.1\|804965_805610_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
AXR49539.1\|805606_805798_-	hypothetical protein	NA	NA	NA	NA
AXR49540.1\|805781_806192_-	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
AXR49541.1\|806384_806732_-	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
AXR49542.1\|806851_807637_-	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
AXR49543.1\|807633_808401_-	primosomal protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
AXR49544.1\|808400_808610_-	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
AXR49545.1\|808756_808990_-	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
AXR49546.1\|809144_809726_+	XRE family transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
AXR49547.1\|810092_810392_+	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
AXR49548.1\|810388_811210_+	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
AXR49549.1\|811206_812088_+	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
AXR49550.1\|812136_812385_+	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
AXR49551.1\|812494_812788_+	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
AXR49552.1\|812780_812939_+	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
AXR49553.1\|812935_813598_+	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
AXR49554.1\|813594_814188_+	adenine methylase	T1SA14	Salmonella_phage	6.3e-109	91.9
AXR49555.1\|814184_814427_+	hypothetical protein	NA	NA	NA	NA
AXR49556.1\|814369_815620_-	DUF4102 domain-containing protein	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
AXR49557.1\|815811_817389_-	GMP synthase (glutamine-hydrolyzing)	NA	NA	NA	NA
AXR49558.1\|817456_818923_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7

DBSCAN-SWA_4

890272 : 972780

Salmonella_phage(70.0%)

transposase,portal,plate,coat,capsid,head,tail,integrase,lysis,tRNA

attL 934967:935013|attR 973320:973366

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR49620.1\|890272_891010_-\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AXR49621.1\|891141_892473_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AXR49622.1\|892518_892902_-	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AXR49623.1\|893215_893905_+	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
AXR49624.1\|893962_895048_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AXR49625.1\|895251_895677_+	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AXR49626.1\|895746_896445_+	DTW domain-containing protein	NA	NA	NA	NA
AXR49627.1\|896479_899131_+	protein lysine acetyltransferase	NA	NA	NA	NA
AXR49628.1\|899251_900607_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AXR49629.1\|900648_900972_+	YfiM family lipoprotein	NA	NA	NA	NA
AXR49630.1\|900975_902274_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
AXR49631.1\|908239_910813_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AXR49632.1\|910942_911674_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXR49633.1\|911670_912651_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AXR49634.1\|912782_913520_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXR49635.1\|913790_914126_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AXR53871.1\|914232_914280_+	hypothetical protein	NA	NA	NA	NA
AXR49636.1\|914380_915541_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AXR49637.1\|915537_916410_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AXR49638.1\|916472_917594_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXR49639.1\|917603_918674_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AXR49640.1\|919016_919526_+	YfiR family protein	NA	NA	NA	NA
AXR49641.1\|919518_920742_+	diguanylate cyclase	NA	NA	NA	NA
AXR49642.1\|920755_921238_+	OmpA family protein	NA	NA	NA	NA
AXR49643.1\|921246_922617_-	PepSY domain-containing protein	NA	NA	NA	NA
AXR49644.1\|922673_923132_-	DUF2946 domain-containing protein	NA	NA	NA	NA
AXR49645.1\|923251_923599_-	50S ribosomal protein L19	NA	NA	NA	NA
AXR49646.1\|923638_924406_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXR49647.1\|924437_924986_-	ribosome maturation factor RimM	NA	NA	NA	NA
AXR49648.1\|925004_925253_-	30S ribosomal protein S16	NA	NA	NA	NA
AXR49649.1\|925512_926877_-	signal recognition particle protein	NA	NA	NA	NA
AXR49650.1\|927040_927832_+	inner membrane protein YpjD	NA	NA	NA	NA
AXR49651.1\|927851_929138_+	DUF21 domain-containing protein	NA	NA	NA	NA
AXR49652.1\|929257_929848_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXR49653.1\|929972_930851_+	NAD(+) kinase	NA	NA	NA	NA
AXR49654.1\|930937_932599_+	DNA repair protein RecN	NA	NA	NA	NA
AXR49655.1\|932746_933088_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXR49656.1\|933154_933445_-	RnfH family protein	NA	NA	NA	NA
AXR49657.1\|933434_933911_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXR49658.1\|934021_934504_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
934967:935013	attL	NA	NA	NA	NA
AXR49659.1\|935107_935485_+	hypothetical protein	NA	NA	NA	NA
AXR49660.1\|935512_935731_-	levansucrase regulator	Q53ZE7	Salmonella_virus	1.9e-26	72.2
AXR49661.1\|935797_936892_-	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
AXR49662.1\|939991_940111_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AXR49663.1\|940125_940425_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
AXR49664.1\|940477_940993_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
AXR49665.1\|941002_942175_-\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
AXR49666.1\|942323_943397_-\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
AXR49667.1\|943448_944567_-	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
AXR49668.1\|944576_946526_-\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
AXR53872.1\|946527_947199_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
AXR49669.1\|947191_948100_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
AXR49670.1\|948086_948449_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
AXR49671.1\|948445_949018_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
AXR49672.1\|949112_949979_+	hypothetical protein	NA	NA	NA	NA
AXR49673.1\|950001_950448_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
AXR49674.1\|950440_950863_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
AXR49675.1\|950825_951029_-	hypothetical protein	A0A1S6KZX6	Salmonella_phage	3.0e-23	77.6
AXR49676.1\|950958_951387_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
AXR49677.1\|951383_951767_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
AXR49678.1\|951771_952281_-	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
AXR53873.1\|952261_952477_-	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
AXR49679.1\|952480_952684_-\|tail	phage tail protein	E5G6M9	Salmonella_phage	9.8e-30	89.6
AXR49680.1\|952683_953148_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
AXR49681.1\|953243_953897_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
AXR49682.1\|953900_954953_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
AXR49683.1\|954969_955803_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
AXR49684.1\|955943_957707_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
AXR49685.1\|957706_958750_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
AXR49686.1\|958806_959076_-	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
AXR49687.1\|959597_960599_+	hypothetical protein	NA	NA	NA	NA
AXR49688.1\|960598_961678_+	hypothetical protein	NA	NA	NA	NA
AXR49689.1\|961664_962348_+	hypothetical protein	NA	NA	NA	NA
AXR49690.1\|962443_962677_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
AXR49691.1\|962688_962877_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
AXR49692.1\|962984_964469_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR49693.1\|964468_964720_-	hypothetical protein	NA	NA	NA	NA
AXR49694.1\|964949_967334_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
AXR49695.1\|967330_968182_-	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
AXR49696.1\|968178_968406_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
AXR49697.1\|968405_968639_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
AXR49698.1\|968706_969045_-	hypothetical protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
AXR49699.1\|969008_969209_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
AXR49700.1\|969216_969726_-	hypothetical protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
AXR49701.1\|969758_970001_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
AXR49702.1\|970123_970753_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
AXR49703.1\|970755_971754_+\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
AXR49704.1\|971799_972780_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
973320:973366	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1694632 : 1764009

uncultured_Caudovirales_phage(61.11%)

portal,protease,head,tail,integrase,terminase,capsid,tRNA

attL 1730391:1730408|attR 1746385:1746402

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR50398.1\|1694632_1695127_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8
AXR50399.1\|1695130_1695769_-	stringent starvation protein A	NA	NA	NA	NA
AXR50400.1\|1695767_1695971_+	hypothetical protein	NA	NA	NA	NA
AXR50401.1\|1696080_1696473_-	30S ribosomal protein S9	NA	NA	NA	NA
AXR50402.1\|1696488_1696917_-	50S ribosomal protein L13	NA	NA	NA	NA
AXR50403.1\|1697182_1698310_-	cell division protein ZapE	NA	NA	NA	NA
AXR53897.1\|1698500_1698899_+	DUF1043 family protein	NA	NA	NA	NA
AXR50404.1\|1699072_1700440_+\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
AXR50405.1\|1700527_1701586_+\|protease	serine endoprotease DegS	NA	NA	NA	NA
AXR50406.1\|1701722_1702661_-	malate dehydrogenase	NA	NA	NA	NA
AXR50407.1\|1703075_1703546_+	arginine repressor	NA	NA	NA	NA
AXR50408.1\|1703921_1704185_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXR50409.1\|1704283_1704550_+	DUF1471 domain-containing protein	NA	NA	NA	NA
AXR50410.1\|1704600_1704876_-	hypothetical protein	NA	NA	NA	NA
AXR50411.1\|1704955_1706923_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
AXR50412.1\|1706928_1707861_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
AXR50413.1\|1707868_1708072_-	protein AaeX	NA	NA	NA	NA
AXR50414.1\|1708203_1709133_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
AXR50415.1\|1709168_1710614_-\|protease	metalloprotease TldD	NA	NA	NA	NA
AXR50416.1\|1710702_1714500_-	DUF3971 domain-containing protein	NA	NA	NA	NA
AXR50417.1\|1714537_1716007_-	ribonuclease G	NA	NA	NA	NA
AXR50418.1\|1716009_1716591_-	septum formation inhibitor Maf	NA	NA	NA	NA
AXR50419.1\|1716598_1717087_-	rod shape-determining protein MreD	NA	NA	NA	NA
AXR50420.1\|1717086_1718079_-	rod shape-determining protein MreC	NA	NA	NA	NA
AXR50421.1\|1718149_1719193_-	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
AXR53898.1\|1719170_1719377_+	hypothetical protein	NA	NA	NA	NA
AXR50422.1\|1719498_1721439_-	RNase E specificity factor CsrD	NA	NA	NA	NA
AXR50423.1\|1721518_1721710_-	hypothetical protein	NA	NA	NA	NA
AXR50424.1\|1721938_1722940_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
AXR50425.1\|1722939_1723548_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
AXR50426.1\|1723771_1724224_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
AXR50427.1\|1724246_1724714_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
AXR50428.1\|1724724_1726074_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
AXR50429.1\|1726184_1726427_+	DUF997 family protein	NA	NA	NA	NA
AXR50430.1\|1726416_1727868_+	sodium/panthothenate symporter	NA	NA	NA	NA
AXR50431.1\|1727879_1728761_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
AXR50432.1\|1728766_1728961_+	hypothetical protein	NA	NA	NA	NA
AXR50433.1\|1729118_1730084_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
AXR50434.1\|1730108_1730405_+	Fis family transcriptional regulator	NA	NA	NA	NA
1730391:1730408	attL	NA	NA	NA	NA
AXR50435.1\|1730558_1730750_-	hypothetical protein	NA	NA	NA	NA
AXR50436.1\|1730752_1732414_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
AXR50437.1\|1732397_1732754_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
AXR50438.1\|1732711_1732903_-\|terminase	terminase	NA	NA	NA	NA
AXR50439.1\|1733029_1733473_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
AXR50440.1\|1733472_1733772_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
AXR50441.1\|1733768_1734104_-\|head,tail	head-tail adaptor	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
AXR50442.1\|1734100_1735342_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
AXR50443.1\|1735343_1735904_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
AXR50444.1\|1735955_1737122_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
AXR50445.1\|1737385_1737898_+	hypothetical protein	NA	NA	NA	NA
AXR50446.1\|1737946_1738282_-	hypothetical protein	NA	NA	NA	NA
AXR50447.1\|1738624_1740760_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
AXR50448.1\|1740759_1741125_-	hypothetical protein	NA	NA	NA	NA
AXR50449.1\|1741121_1741490_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
AXR50450.1\|1741467_1741800_-	hypothetical protein	NA	NA	NA	NA
AXR50451.1\|1741792_1741981_-	hypothetical protein	NA	NA	NA	NA
AXR53899.1\|1741973_1742243_-	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
AXR50452.1\|1742376_1742571_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
AXR50453.1\|1742694_1743474_-	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
AXR50454.1\|1743484_1743769_-	AlpA family phage regulatory protein	NA	NA	NA	NA
AXR50455.1\|1743950_1744892_-	hypothetical protein	NA	NA	NA	NA
AXR50456.1\|1744984_1746211_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
AXR50457.1\|1746486_1747137_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
1746385:1746402	attR	NA	NA	NA	NA
AXR50458.1\|1747515_1748655_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXR50459.1\|1748667_1751778_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
AXR50460.1\|1752071_1752293_+	hypothetical protein	NA	NA	NA	NA
AXR53900.1\|1758088_1758643_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
AXR50461.1\|1758618_1758876_-	DUF1488 domain-containing protein	NA	NA	NA	NA
AXR50462.1\|1758872_1759691_-	shikimate dehydrogenase	NA	NA	NA	NA
AXR50463.1\|1759694_1760267_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
AXR50464.1\|1760271_1760814_-	hypothetical protein	NA	NA	NA	NA
AXR50465.1\|1760839_1761313_-	DUF494 domain-containing protein	NA	NA	NA	NA
AXR50466.1\|1761284_1762409_-	DNA-protecting protein DprA	NA	NA	NA	NA
AXR50467.1\|1762537_1763047_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
AXR50468.1\|1763061_1764009_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2

DBSCAN-SWA_6

2835941 : 2849371

Enterobacteria_phage(71.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR51441.1\|2835941_2836922_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
AXR51442.1\|2837284_2837821_-	hypothetical protein	NA	NA	NA	NA
AXR51443.1\|2837821_2838901_-	hypothetical protein	NA	NA	NA	NA
AXR51444.1\|2839641_2840208_-	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AXR51445.1\|2840225_2840471_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AXR51446.1\|2840467_2841205_-	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
AXR51447.1\|2842028_2842577_+	Ash-like/host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
AXR51448.1\|2842573_2842801_+	hypothetical protein	NA	NA	NA	NA
AXR51449.1\|2842797_2843118_+	hypothetical protein	NA	NA	NA	NA
AXR51450.1\|2843132_2845466_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
AXR51451.1\|2848214_2848352_+	ABC transporter	NA	NA	NA	NA
AXR51452.1\|2848390_2849371_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1

DBSCAN-SWA_7

3313676 : 3325329

Enterobacteria_phage(70.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR51859.1\|3313676_3316010_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
AXR51860.1\|3316021_3316342_-	hypothetical protein	NA	NA	NA	NA
AXR51861.1\|3316338_3316566_-	hypothetical protein	NA	NA	NA	NA
AXR51862.1\|3316562_3317120_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
AXR51863.1\|3317116_3317383_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
AXR51864.1\|3317924_3318662_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
AXR51865.1\|3318658_3318904_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
AXR51866.1\|3318921_3319488_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
AXR51867.1\|3320055_3320481_-	hypothetical protein	NA	NA	NA	NA
AXR51868.1\|3320480_3321431_-	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
AXR51869.1\|3321418_3322609_-	DUF4102 domain-containing protein	Q7M297	Enterobacteria_phage	6.4e-145	62.7
AXR51870.1\|3322961_3324215_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
AXR51871.1\|3324225_3325329_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5

DBSCAN-SWA_8

3979374 : 4016710

Salmonella_phage(84.62%)

portal,lysis,plate,head,integrase,tail,capsid

attL 3979282:3979300|attR 4016782:4016800

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3979282:3979300	attL	NA	NA	NA	NA
AXR52449.1\|3979374_3980427_-\|integrase	site-specific integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
AXR52450.1\|3980594_3980846_+	hypothetical protein	NA	NA	NA	NA
AXR52451.1\|3980845_3982330_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR52452.1\|3982428_3983373_-	hypothetical protein	NA	NA	NA	NA
AXR52453.1\|3983384_3984263_-	Repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.7e-30	39.9
AXR52454.1\|3984408_3984630_+	regulator	NA	NA	NA	NA
AXR52455.1\|3984662_3985172_+	hypothetical protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
AXR53999.1\|3985179_3985380_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
AXR52456.1\|3985343_3985685_+	hypothetical protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
AXR52457.1\|3985752_3985986_+	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
AXR52458.1\|3985985_3986213_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
AXR52459.1\|3986209_3987067_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
AXR52460.1\|3987063_3989478_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
AXR52461.1\|3989631_3989820_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
AXR52462.1\|3989758_3990064_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
AXR52463.1\|3990178_3990856_+	hypothetical protein	NA	NA	NA	NA
AXR52464.1\|3991131_3992874_+	hypothetical protein	NA	NA	NA	NA
AXR52465.1\|3992935_3993961_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
AXR52466.1\|3993960_3995727_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
AXR52467.1\|3995869_3996703_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
AXR52468.1\|3996719_3997778_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
AXR52469.1\|3997781_3998432_+	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AXR52470.1\|3998527_3998992_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
AXR52471.1\|3998991_3999195_+\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AXR52472.1\|3999198_3999414_+	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
AXR52473.1\|3999394_3999904_+	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
AXR52474.1\|3999908_4000292_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
AXR52475.1\|4000288_4000717_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
AXR52476.1\|4000812_4001244_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
AXR52477.1\|4001236_4001683_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
AXR52478.1\|4001679_4002372_-	hypothetical protein	NA	NA	NA	NA
AXR52479.1\|4002466_4003039_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
AXR52480.1\|4003035_4003398_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
AXR52481.1\|4003384_4004293_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
AXR54000.1\|4004285_4004885_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
AXR52482.1\|4004886_4007838_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
AXR52483.1\|4007841_4008573_+	hypothetical protein	NA	NA	NA	NA
AXR52484.1\|4008569_4008773_+	hypothetical protein	NA	NA	NA	NA
AXR52485.1\|4008802_4009879_+\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
AXR52486.1\|4010017_4011190_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
AXR52487.1\|4011199_4011715_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
AXR52488.1\|4011767_4012067_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
AXR52489.1\|4012081_4012201_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AXR52490.1\|4012193_4014821_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
AXR52491.1\|4014817_4015303_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
AXR52492.1\|4015299_4016400_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
AXR52493.1\|4016491_4016710_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.5e-20	69.0
4016782:4016800	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4051126 : 4060590

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR52523.1\|4051126_4052242_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
AXR52524.1\|4052238_4054179_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AXR52525.1\|4054118_4054301_+	hypothetical protein	NA	NA	NA	NA
AXR52526.1\|4054255_4054477_-	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AXR52527.1\|4054802_4055120_+\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AXR52528.1\|4055150_4057430_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AXR52529.1\|4057550_4057769_-	translation initiation factor IF-1	NA	NA	NA	NA
AXR52530.1\|4058122_4058824_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXR52531.1\|4058868_4060590_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_10

4288664 : 4378942

Klebsiella_phage(46.34%)

transposase,portal,head,tail,holin,terminase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR54015.1\|4288664_4289771_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AXR52730.1\|4289827_4290286_-	NUDIX hydrolase	NA	NA	NA	NA
AXR52731.1\|4290302_4290953_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AXR52732.1\|4291193_4292444_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AXR52733.1\|4293477_4293678_+	hypothetical protein	NA	NA	NA	NA
AXR52734.1\|4293716_4294697_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXR52735.1\|4294869_4295115_-	excisionase	NA	NA	NA	NA
AXR52736.1\|4295167_4297306_-	exonuclease	S4TNL0	Salmonella_phage	5.6e-99	42.7
AXR52737.1\|4297447_4297792_-	transcriptional regulator	NA	NA	NA	NA
AXR52738.1\|4297834_4298029_-	DUF1482 family protein	NA	NA	NA	NA
AXR52739.1\|4298038_4298257_-	hypothetical protein	NA	NA	NA	NA
AXR52740.1\|4298419_4298734_+	hypothetical protein	NA	NA	NA	NA
AXR52741.1\|4299055_4299493_-	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
AXR52742.1\|4299581_4299806_+	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
AXR52743.1\|4299808_4300363_+	hypothetical protein	NA	NA	NA	NA
AXR54016.1\|4300422_4301427_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
AXR52744.1\|4301419_4301884_+	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
AXR52745.1\|4301897_4302338_+	hypothetical protein	NA	NA	NA	NA
AXR52746.1\|4302686_4304078_-	hypothetical protein	NA	NA	NA	NA
AXR52747.1\|4304166_4304367_-	hypothetical protein	NA	NA	NA	NA
AXR52748.1\|4304490_4305471_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXR52749.1\|4306587_4307301_+	hypothetical protein	NA	NA	NA	NA
AXR52750.1\|4307474_4308836_+	dNTP triphosphohydrolase	NA	NA	NA	NA
AXR52751.1\|4309425_4309677_+	hypothetical protein	NA	NA	NA	NA
AXR52752.1\|4309676_4311161_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR52753.1\|4311239_4311473_+	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
AXR52754.1\|4311484_4311775_+	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
AXR52755.1\|4311815_4312208_+	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AXR52756.1\|4312204_4312408_+	hypothetical protein	NA	NA	NA	NA
AXR52757.1\|4313454_4314057_+	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
AXR52758.1\|4316308_4316524_+\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AXR52759.1\|4316523_4317021_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
AXR52760.1\|4317017_4317368_+	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
AXR52761.1\|4318302_4318755_+	hypothetical protein	NA	NA	NA	NA
AXR52762.1\|4318793_4319018_-	hypothetical protein	NA	NA	NA	NA
AXR52763.1\|4319344_4319707_+	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
AXR52764.1\|4319658_4319982_+	hypothetical protein	NA	NA	NA	NA
AXR52765.1\|4319978_4320410_+	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
AXR52766.1\|4320658_4321093_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AXR52767.1\|4322808_4322988_+	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
AXR52768.1\|4322987_4324247_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AXR52769.1\|4324283_4325204_+	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
AXR52770.1\|4326625_4326886_+	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
AXR52771.1\|4326866_4327184_+\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AXR52772.1\|4327180_4327519_+\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
AXR52773.1\|4327499_4327889_+	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
AXR52774.1\|4327885_4328287_+	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
AXR52775.1\|4328318_4328780_+\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AXR52776.1\|4328837_4329203_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AXR52777.1\|4329217_4329436_+	hypothetical protein	Q6UAW9	Klebsiella_phage	5.4e-34	90.5
AXR52778.1\|4329435_4332771_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AXR52779.1\|4332770_4333109_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
AXR52780.1\|4333105_4333861_+\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
AXR52781.1\|4333862_4334573_+	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
AXR52782.1\|4334614_4335037_+	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
AXR52783.1\|4335718_4348423_+	hypothetical protein	Q6UAW1	Klebsiella_phage	0.0e+00	48.0
AXR52784.1\|4348491_4349988_+\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
AXR52785.1\|4350142_4350295_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AXR52786.1\|4350568_4351282_-	ArsR family transcriptional regulator	NA	NA	NA	NA
AXR52787.1\|4351278_4351671_-	amino acid-binding protein	NA	NA	NA	NA
AXR52788.1\|4351663_4351987_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXR52789.1\|4352423_4352651_-	DUF1272 domain-containing protein	NA	NA	NA	NA
AXR52790.1\|4352763_4353957_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AXR52791.1\|4354578_4354764_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AXR52792.1\|4354854_4355349_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AXR52793.1\|4355375_4355882_+	ferritin-like domain-containing protein	NA	NA	NA	NA
AXR52794.1\|4355898_4356786_+	manganese catalase family protein	NA	NA	NA	NA
AXR52795.1\|4356841_4358248_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AXR52796.1\|4358244_4359255_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AXR52797.1\|4359370_4359568_-	hypothetical protein	NA	NA	NA	NA
AXR52798.1\|4360134_4360767_+	DNA-binding protein	NA	NA	NA	NA
AXR52799.1\|4360806_4360986_+	hypothetical protein	NA	NA	NA	NA
AXR52800.1\|4361383_4362070_+	EAL domain-containing protein	NA	NA	NA	NA
AXR52801.1\|4362380_4363889_-	UbiD family decarboxylase	NA	NA	NA	NA
AXR52802.1\|4364009_4364900_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXR52803.1\|4364906_4366691_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AXR52804.1\|4366764_4367973_-	HD domain-containing protein	NA	NA	NA	NA
AXR52805.1\|4368275_4369319_+	type II asparaginase	NA	NA	NA	NA
AXR52806.1\|4369573_4369765_-	hypothetical protein	NA	NA	NA	NA
AXR52807.1\|4369980_4370895_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AXR52808.1\|4370984_4371623_+	leucine efflux protein	NA	NA	NA	NA
AXR52809.1\|4371753_4372017_+	DUF2534 family protein	NA	NA	NA	NA
AXR52810.1\|4372076_4372202_-	hypothetical protein	NA	NA	NA	NA
AXR54017.1\|4372319_4372394_-	hypothetical protein	NA	NA	NA	NA
AXR52811.1\|4372393_4372495_-	hypothetical protein	NA	NA	NA	NA
AXR52812.1\|4372552_4373566_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
AXR52813.1\|4373866_4374106_+	DUF333 domain-containing protein	NA	NA	NA	NA
AXR52814.1\|4374095_4374452_-	DUF488 domain-containing protein	NA	NA	NA	NA
AXR52815.1\|4374438_4374948_-	DUF523 domain-containing protein	NA	NA	NA	NA
AXR52816.1\|4375093_4375786_+	hypothetical protein	NA	NA	NA	NA
AXR52817.1\|4375817_4377002_-	cyanate MFS transporter	NA	NA	NA	NA
AXR54018.1\|4377103_4377895_+	AraC family transcriptional regulator	NA	NA	NA	NA
AXR52818.1\|4377878_4378325_-	DUF441 domain-containing protein	NA	NA	NA	NA
AXR52819.1\|4378441_4378942_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_11

4507813 : 4535253

Enterobacteria_phage(38.71%)

transposase,integrase,holin

attL 4499791:4499806|attR 4522630:4522645

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4499791:4499806	attL	NA	NA	NA	NA
AXR52940.1\|4507813_4508623_-	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
AXR52941.1\|4508624_4509617_-	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AXR52942.1\|4509616_4510507_-	peptide ABC transporter permease SapC	NA	NA	NA	NA
AXR54024.1\|4510683_4511871_+\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
AXR52943.1\|4511767_4512082_-	hypothetical protein	K7PM28	Enterobacteria_phage	1.6e-10	50.8
AXR52944.1\|4512078_4512741_-	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
AXR52945.1\|4512737_4513166_-	regulator	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
AXR52946.1\|4513162_4513843_-	exonuclease	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
AXR52947.1\|4514128_4514974_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
AXR52948.1\|4514989_4515274_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
AXR52949.1\|4515362_4515557_-	hypothetical protein	NA	NA	NA	NA
AXR52950.1\|4515985_4516189_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
AXR52951.1\|4516270_4517347_-	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
AXR52952.1\|4517492_4517612_-	hypothetical protein	NA	NA	NA	NA
AXR52953.1\|4517634_4518333_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
AXR52954.1\|4518444_4518672_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AXR52955.1\|4518712_4518934_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AXR52956.1\|4519019_4519880_+	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
AXR52957.1\|4519876_4520725_+	AAA family ATPase	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
AXR52958.1\|4520721_4521024_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXR52959.1\|4521079_4521325_+	hypothetical protein	NA	NA	NA	NA
AXR52960.1\|4521532_4522561_-	hypothetical protein	NA	NA	NA	NA
AXR52961.1\|4523081_4523549_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
4522630:4522645	attR	NA	NA	NA	NA
AXR52962.1\|4523529_4523697_+	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
AXR52963.1\|4523693_4524362_+	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
AXR52964.1\|4524354_4524993_+	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
AXR52965.1\|4524989_4525130_+	YlcG family protein	NA	NA	NA	NA
AXR54025.1\|4525129_4525819_+	antiterminator	I6PDF8	Cronobacter_phage	2.1e-55	53.1
AXR52966.1\|4526456_4526768_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AXR52967.1\|4526764_4527304_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
AXR52968.1\|4527300_4527588_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.4e-36	95.4
AXR52969.1\|4527624_4528329_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXR52970.1\|4528921_4529344_+	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
AXR52971.1\|4529990_4530242_+	hypothetical protein	NA	NA	NA	NA
AXR52972.1\|4530241_4531726_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXR52973.1\|4531805_4532225_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
AXR52974.1\|4532226_4533492_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	9.6e-208	82.7
AXR54026.1\|4533567_4534395_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
AXR52975.1\|4534581_4535253_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6

DBSCAN-SWA_12

4568187 : 4639833

uncultured_Caudovirales_phage(32.0%)

transposase,plate,head,tail,terminase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR53006.1\|4568187_4568949_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5
AXR53007.1\|4569165_4570698_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
AXR53008.1\|4570896_4571445_-	DJ-1/PfpI family protein	NA	NA	NA	NA
AXR53009.1\|4571641_4572823_+	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
AXR53010.1\|4572803_4573046_-	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AXR53011.1\|4573224_4573704_-	hypothetical protein	NA	NA	NA	NA
AXR53012.1\|4573700_4573913_-	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
AXR53013.1\|4573909_4574134_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
AXR53014.1\|4574123_4574834_-	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
AXR53015.1\|4574839_4575358_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
AXR53016.1\|4575462_4576290_-	SPFH/Band 7/PHB domain protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
AXR53017.1\|4576286_4576481_-	hypothetical protein	NA	NA	NA	NA
AXR53018.1\|4576477_4576903_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
AXR53019.1\|4577089_4577344_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
AXR53020.1\|4577336_4577702_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
AXR53021.1\|4577871_4578060_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
AXR53022.1\|4578052_4578367_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
AXR53023.1\|4578537_4579206_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
AXR53024.1\|4579303_4579525_+	XRE family transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
AXR53025.1\|4579499_4579793_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
AXR53026.1\|4580101_4581760_+	ATP-dependent helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
AXR53027.1\|4581761_4582724_+	DNA primase	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
AXR53028.1\|4582720_4583197_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
AXR53029.1\|4583193_4583976_+	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
AXR53030.1\|4584381_4584630_+\|lysis	lysis protein	NA	NA	NA	NA
AXR53031.1\|4584632_4585163_+	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
AXR53032.1\|4585159_4585549_+	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
AXR53033.1\|4585783_4586104_+	negative regulator GrlR	NA	NA	NA	NA
AXR53034.1\|4586205_4586958_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
AXR53035.1\|4586908_4588309_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
AXR53036.1\|4588546_4589998_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
AXR53037.1\|4590053_4590602_+	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
AXR53038.1\|4590653_4591856_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
AXR53039.1\|4591859_4592354_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
AXR53040.1\|4592365_4593307_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
AXR53041.1\|4593346_4593628_+	hypothetical protein	NA	NA	NA	NA
AXR53042.1\|4593596_4594016_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
AXR53043.1\|4594012_4594519_+	hypothetical protein	NA	NA	NA	NA
AXR53044.1\|4594518_4594905_+\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
AXR53045.1\|4594999_4595440_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
AXR53046.1\|4595443_4596589_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
AXR53047.1\|4596599_4597040_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
AXR53048.1\|4597043_4597469_+	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
AXR53049.1\|4597504_4597657_+	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
AXR53050.1\|4597646_4599650_+	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
AXR53051.1\|4599649_4600249_+	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
AXR53052.1\|4600249_4600552_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
AXR53053.1\|4601575_4601917_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
AXR53054.1\|4601969_4602155_-	hypothetical protein	NA	NA	NA	NA
AXR53055.1\|4602191_4602758_+	hypothetical protein	NA	NA	NA	NA
AXR53056.1\|4602811_4603465_+	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
AXR53057.1\|4603466_4603820_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
AXR53058.1\|4603819_4605016_+	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
AXR53059.1\|4605012_4605786_+	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
AXR53060.1\|4605785_4606652_+	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
AXR53061.1\|4606651_4606849_+	hypothetical protein	NA	NA	NA	NA
AXR54029.1\|4609199_4609928_+	hypothetical protein	NA	NA	NA	NA
AXR53062.1\|4609938_4610670_+	hypothetical protein	NA	NA	NA	NA
AXR53063.1\|4610666_4610876_+	hypothetical protein	NA	NA	NA	NA
AXR53064.1\|4610980_4611265_+	hypothetical protein	NA	NA	NA	NA
AXR53065.1\|4611487_4611736_-	DinI family protein	S5MQI1	Escherichia_phage	1.4e-25	70.4
AXR53066.1\|4612149_4612293_+	ABC transporter	NA	NA	NA	NA
AXR53067.1\|4612331_4613312_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
AXR53068.1\|4613781_4614273_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AXR53069.1\|4614315_4615860_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AXR54030.1\|4615872_4617213_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AXR53070.1\|4617209_4617899_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AXR53071.1\|4617895_4619602_+	OmpA family protein	NA	NA	NA	NA
AXR53072.1\|4619606_4620098_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AXR53073.1\|4620362_4623017_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.5e-96	33.4
AXR53074.1\|4623009_4625388_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.2e-18	33.8
AXR53075.1\|4625388_4626168_+	DUF4123 domain-containing protein	NA	NA	NA	NA
AXR53076.1\|4626231_4626762_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AXR53077.1\|4626830_4627361_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AXR53078.1\|4628026_4628557_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AXR53079.1\|4628624_4629155_+	DUF3304 domain-containing protein	NA	NA	NA	NA
AXR53080.1\|4629142_4631560_+	DUF2235 domain-containing protein	NA	NA	NA	NA
AXR53081.1\|4631604_4631862_+	PAAR domain-containing protein	NA	NA	NA	NA
AXR53082.1\|4631858_4632998_+	hypothetical protein	NA	NA	NA	NA
AXR53083.1\|4632981_4636407_+	type VI secretion protein VasK	NA	NA	NA	NA
AXR53084.1\|4636406_4636814_+	type VI secretion protein	NA	NA	NA	NA
AXR53085.1\|4636865_4637999_+	type VI secretion system protein TssA	NA	NA	NA	NA
AXR53086.1\|4638078_4639833_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_13

4834145 : 4845032

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXR53269.1\|4834145_4834766_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
AXR53270.1\|4834758_4836024_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
AXR53271.1\|4836035_4836938_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
AXR53272.1\|4837198_4837960_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AXR53273.1\|4837980_4838841_-	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AXR53274.1\|4839138_4839399_+	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
AXR53275.1\|4839485_4840574_+	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AXR53276.1\|4840604_4841870_-	MFS transporter	NA	NA	NA	NA
AXR53277.1\|4841924_4845032_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP030133

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP030132

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP030134

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP029689

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection