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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP031802 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed2, complete sequence 0 crisprs DEDDh 0 0 1 0
CP031803 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed3, complete sequence 0 crisprs DEDDh 0 0 1 0
CP031807 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed7, complete sequence 0 crisprs NA 0 0 0 0
CP031800 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 chromosome, complete genome 1 crisprs DEDDh,DinG,cas3,csa3,WYL 0 0 12 0
CP031806 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed6, complete sequence 0 crisprs DEDDh 0 0 1 0
CP031804 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
CP031801 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence 0 crisprs RT 0 0 1 0
CP031805 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed5, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. CP031806
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 53488 56 Klebsiella_phage(86.27%) terminase,head,capsid,portal,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP031802
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 18015 : 49280 32 Salmonella_phage(40.0%) integrase,transposase attL 17964:18023|attR 50225:51044
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP031803
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 110803 118 Salmonella_phage(88.24%) integrase,tail,capsid,terminase attL 15410:15428|attR 98303:98321
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP031800
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP031800_1 3053995-3054131 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 67517 : 154887 94 Klebsiella_phage(18.87%) terminase,portal,integrase,tRNA,head,tail,protease,capsid,holin attL 90523:90546|attR 132134:132157
DBSCAN-SWA_2 249068 : 257353 6 Pectobacterium_phage(33.33%) tRNA NA
DBSCAN-SWA_3 370835 : 377740 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_4 421084 : 434401 11 Enterobacteria_phage(22.22%) NA NA
DBSCAN-SWA_5 610177 : 619695 14 Pectobacterium_phage(58.33%) integrase attL 609359:609374|attR 622919:622934
DBSCAN-SWA_6 623392 : 646295 25 uncultured_Caudovirales_phage(50.0%) transposase,tail,holin NA
DBSCAN-SWA_7 670780 : 719663 71 Salmonella_phage(27.78%) head NA
DBSCAN-SWA_8 1538802 : 1548978 10 Escherichia_phage(77.78%) transposase NA
DBSCAN-SWA_9 1942847 : 2015812 92 Klebsiella_phage(22.0%) terminase,portal,integrase,tRNA,tail,protease,holin attL 1969664:1969678|attR 2016152:2016166
DBSCAN-SWA_10 2191448 : 2315024 120 Escherichia_phage(46.38%) terminase,portal,integrase,tRNA,tail,plate,head,protease,capsid,lysis,holin attL 2202793:2202809|attR 2296448:2296464
DBSCAN-SWA_11 3978392 : 4065066 88 Enterobacteria_phage(35.9%) terminase,portal,integrase,tRNA,tail,plate,capsid,protease attL 3972016:3972034|attR 4066737:4066755
DBSCAN-SWA_12 4831712 : 4873452 52 Salmonella_phage(82.5%) transposase,portal,integrase,head,tail,plate,tRNA,capsid,lysis attL 4831608:4831667|attR 4862380:4862445
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. CP031801
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1707 : 33742 30 Shigella_phage(18.18%) transposase,integrase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage