CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031809	Klebsiella pneumoniae strain INF206-sc-2280074 plasmid unnamed, complete sequence	0 crisprs	csa3	0	0	2	0
CP031808	Klebsiella pneumoniae strain INF206-sc-2280074 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3379 : 151197

112

Enterobacteria_phage(23.81%)

transposase,integrase

attL 67953:68012|attR 110167:111223

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS47984.1\|3379_4303_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.6e-175	98.4
AXS47985.1\|4397_4934_-	plasmid transfer protein	NA	NA	NA	NA
AXS47986.1\|6184_7201_+\|transposase	IS110 family transposase	NA	NA	NA	NA
AXS47987.1\|7389_8313_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	4.3e-173	97.7
AXS47988.1\|9091_10264_-	diguanylate phosphodiesterase	NA	NA	NA	NA
AXS47989.1\|10522_11446_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.1e-172	96.7
AXS47990.1\|12179_12824_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXS47991.1\|12900_14373_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AXS47992.1\|14766_15189_-	MarR family transcriptional regulator	NA	NA	NA	NA
AXS47993.1\|15975_16995_+	alpha/beta hydrolase	M1PGN2	Moumouvirus	1.9e-57	37.1
AXS47994.1\|18114_19038_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.6e-175	99.3
AXS47995.1\|19212_20151_+	GlxA family transcriptional regulator	NA	NA	NA	NA
AXS47996.1\|20302_21118_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AXS47997.1\|21174_21936_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	6.8e-07	26.2
AXS47998.1\|21982_23185_+	MFS transporter	NA	NA	NA	NA
AXS47999.1\|23366_23672_-	hypothetical protein	NA	NA	NA	NA
AXS48000.1\|23760_24684_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	4.3e-173	97.7
AXS48001.1\|25112_30794_+	DUF4011 domain-containing protein	A0A240FAT5	Liberibacter_phage	1.9e-08	46.1
AXS48002.1\|31107_32646_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.5e-274	92.0
AXS48003.1\|32694_33042_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	4.1e-60	96.5
AXS48004.1\|33038_33365_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	4.6e-45	80.3
AXS48005.1\|34132_34444_+	cytoplasmic protein	NA	NA	NA	NA
AXS48006.1\|34440_34860_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXS48007.1\|34805_35048_-	hypothetical protein	NA	NA	NA	NA
AXS48008.1\|35051_35975_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-165	92.8
AXS48159.1\|36428_37337_+	HNH endonuclease	NA	NA	NA	NA
AXS48009.1\|37724_38075_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.4e-20	54.3
AXS48010.1\|38218_38650_-	silver-binding protein SilE	NA	NA	NA	NA
AXS48011.1\|38900_40376_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	1.0e-27	30.1
AXS48012.1\|40368_41049_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	36.0
AXS48013.1\|41238_42624_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
AXS48014.1\|42652_43006_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA
AXS48015.1\|43119_44412_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXS48016.1\|44422_47569_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	4.0e-61	22.5
AXS48017.1\|47655_48096_+	hypothetical protein	NA	NA	NA	NA
AXS48018.1\|48222_50670_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.4e-84	35.8
AXS48019.1\|50710_50908_+	DUF2933 domain-containing protein	NA	NA	NA	NA
AXS48020.1\|50941_51679_-	peptidase M23	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.3
AXS48021.1\|51967_52417_-	copper resistance protein	NA	NA	NA	NA
AXS48022.1\|52650_54468_+	multicopper oxidase PcoA	NA	NA	NA	NA
AXS48023.1\|54467_55364_+	copper resistance protein B	NA	NA	NA	NA
AXS48024.1\|55403_55784_+	copper resistance system chaperone PcoC	NA	NA	NA	NA
AXS48025.1\|55788_56718_+	copper resistance protein D	NA	NA	NA	NA
AXS48026.1\|56772_57453_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	8.7e-30	34.4
AXS48027.1\|57449_58850_+	sensor histidine kinase	W8CYF6	Bacillus_phage	2.4e-18	26.6
AXS48028.1\|59065_59500_+	copper-binding protein	NA	NA	NA	NA
AXS48029.1\|59796_60777_-\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	9.8e-184	97.9
AXS48030.1\|61189_61579_+	tautomerase family protein	NA	NA	NA	NA
AXS48031.1\|61970_62978_+	DUF1611 domain-containing protein	NA	NA	NA	NA
AXS48032.1\|62979_63945_+	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA
AXS48033.1\|63960_65826_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-14	30.7
AXS48034.1\|65848_67390_+	glutathione ABC transporter substrate-binding protein	NA	NA	NA	NA
67953:68012	attL	NA	NA	NA	NA
AXS48035.1\|68007_68931_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.7e-166	93.2
AXS48036.1\|69465_70350_+	ABC transporter permease subunit	NA	NA	NA	NA
AXS48037.1\|70352_71396_+	S58 family peptidase	NA	NA	NA	NA
AXS48038.1\|71392_72214_+	aminopeptidase	NA	NA	NA	NA
AXS48160.1\|72785_73694_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXS48039.1\|74874_75798_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	2.5e-173	97.7
AXS48040.1\|76287_76797_+	molybdenum cofactor biosynthesis protein MoeA	NA	NA	NA	NA
AXS48041.1\|76819_78514_+	hypothetical protein	NA	NA	NA	NA
AXS48042.1\|78560_79484_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.7e-166	93.2
AXS48161.1\|79813_80056_+	EAL domain-containing protein	NA	NA	NA	NA
AXS48043.1\|80386_80680_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
AXS48044.1\|80778_81546_-	iron-dicitrate ABC transporter ATP-binding subunit	G3M9Y6	Bacillus_virus	9.8e-14	25.2
AXS48045.1\|81546_82503_-	iron-dicitrate ABC transporter permease FecD	NA	NA	NA	NA
AXS48046.1\|82499_83498_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
AXS48047.1\|83494_84397_-	Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
AXS48048.1\|84441_86766_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
AXS48049.1\|86852_87806_-	fec operon regulator FecR	NA	NA	NA	NA
AXS48050.1\|87802_88324_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
AXS48051.1\|89380_89548_+\|integrase	integrase	NA	NA	NA	NA
AXS48052.1\|89832_90960_+	regulator	NA	NA	NA	NA
AXS48053.1\|90956_91550_+	ANTAR domain-containing protein	NA	NA	NA	NA
AXS48054.1\|91546_92395_+	ABC transporter permease	NA	NA	NA	NA
AXS48055.1\|92394_93315_+	ABC transporter permease	NA	NA	NA	NA
AXS48056.1\|93327_94932_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXS48057.1\|94976_95924_+	acetamidase	A0A1V0S8X7	Catovirus	9.6e-11	22.7
AXS48058.1\|95931_97665_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
AXS48059.1\|99485_100727_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-219	79.7
AXS48162.1\|100775_101192_-\|transposase	transposase	A0A0P0ZDM8	Stx2-converting_phage	4.9e-60	99.1
AXS48060.1\|102876_103413_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
AXS48061.1\|103402_104401_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-16	31.3
AXS48163.1\|104417_105248_-	ABC transporter permease	NA	NA	NA	NA
AXS48062.1\|105256_106195_-	ABC transporter permease	NA	NA	NA	NA
AXS48063.1\|106249_107845_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
AXS48064.1\|108088_109087_+	GntR family transcriptional regulator	NA	NA	NA	NA
AXS48065.1\|109073_109769_+	creatininase family protein	NA	NA	NA	NA
AXS48066.1\|110221_111145_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.7e-166	93.2
AXS48067.1\|111603_112527_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-171	97.1
110167:111223	attR	NA	NA	NA	NA
AXS48068.1\|115091_116528_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	7.2e-10	23.3
AXS48069.1\|116626_117415_+	arylamine N-acetyltransferase	NA	NA	NA	NA
AXS48070.1\|118445_118649_-	hypothetical protein	NA	NA	NA	NA
AXS48071.1\|120986_121364_+	superinfection immunity protein	M4MA40	Vibrio_phage	7.5e-07	56.8
AXS48072.1\|122521_123331_-	chaperonin	A0A0F7L9X0	Escherichia_phage	1.5e-150	91.8
AXS48073.1\|123590_124364_-	hypothetical protein	NA	NA	NA	NA
AXS48074.1\|124662_126063_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
AXS48075.1\|126267_126663_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXS48164.1\|126711_128058_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
AXS48076.1\|130359_132231_-	DUF262 domain-containing protein	NA	NA	NA	NA
AXS48077.1\|132288_132798_-	hypothetical protein	NA	NA	NA	NA
AXS48078.1\|132849_133605_-	M48 family peptidase	NA	NA	NA	NA
AXS48079.1\|133601_136886_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.3e-66	27.4
AXS48080.1\|136955_138740_-	cold shock domain-containing protein	NA	NA	NA	NA
AXS48081.1\|138762_139446_-	YecA family protein	NA	NA	NA	NA
AXS48082.1\|139442_140657_-	restriction endonuclease subunit S	NA	NA	NA	NA
AXS48083.1\|140646_142170_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.0e-88	38.7
AXS48084.1\|142346_143270_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.5e-173	97.4
AXS48085.1\|144035_144959_+\|transposase	IS5-like element IS903 family transposase	Q1MVF0	Enterobacteria_phage	5.6e-173	97.4
AXS48086.1\|146377_146902_-	hypothetical protein	NA	NA	NA	NA
AXS48087.1\|147118_147508_-	hypothetical protein	NA	NA	NA	NA
AXS48088.1\|148906_149695_+	hypothetical protein	NA	NA	NA	NA
AXS48089.1\|150789_151197_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.1e-14	40.2

DBSCAN-SWA_2

165689 : 232739

Enterobacteria_phage(26.09%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS48102.1\|165689_166613_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-165	92.8
AXS48103.1\|166804_167779_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
AXS48104.1\|168134_168485_+	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	1.1e-23	50.9
AXS48105.1\|168536_168899_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA
AXS48106.1\|168916_170668_+	arsenical pump-driving ATPase	NA	NA	NA	NA
AXS48107.1\|170715_172005_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	3.3e-171	73.8
AXS48108.1\|172017_172443_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-52	72.9
AXS48109.1\|172475_172904_-	N-acetyltransferase	NA	NA	NA	NA
AXS48110.1\|174342_175419_-\|transposase	IS110 family transposase	NA	NA	NA	NA
AXS48111.1\|176988_177891_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	5.4e-11	24.3
AXS48112.1\|178183_178903_+	SDR family oxidoreductase	NA	NA	NA	NA
AXS48113.1\|178969_180292_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	A0A1V0SKB7	Klosneuvirus	5.6e-17	28.1
AXS48114.1\|180288_181755_-	APC family permease	NA	NA	NA	NA
AXS48115.1\|181823_183194_-	glutamine synthetase	NA	NA	NA	NA
AXS48165.1\|183365_184217_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AXS48116.1\|184271_185021_+	N-formylglutamate amidohydrolase	NA	NA	NA	NA
AXS48117.1\|185024_185672_+	cysteine hydrolase	NA	NA	NA	NA
AXS48118.1\|185758_186682_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	9.6e-173	97.4
AXS48119.1\|186723_187149_-	RES domain-containing protein	NA	NA	NA	NA
AXS48120.1\|187145_187589_-	DUF2384 domain-containing protein	NA	NA	NA	NA
AXS48166.1\|189441_189747_+	chorismate mutase	NA	NA	NA	NA
AXS48121.1\|190119_190350_-	hypothetical protein	NA	NA	NA	NA
AXS48167.1\|190560_191768_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	4.0e-102	63.4
AXS48122.1\|192936_193221_+	hypothetical protein	NA	NA	NA	NA
AXS48123.1\|193489_194425_-\|protease	omptin family outer membrane protease Kop	NA	NA	NA	NA
AXS48124.1\|195651_196029_-	hypothetical protein	NA	NA	NA	NA
AXS48168.1\|196452_197659_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-101	63.2
AXS48125.1\|197900_198254_-	glyoxalase	NA	NA	NA	NA
AXS48126.1\|198986_199910_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.3e-173	97.4
AXS48127.1\|199946_200339_+	transcriptional repressor	NA	NA	NA	NA
AXS48128.1\|200418_201102_+	FadR family transcriptional regulator	NA	NA	NA	NA
AXS48129.1\|201817_202741_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	1.6e-175	98.4
AXS48130.1\|203588_204275_+	histidine ABC transporter permease HisQ	NA	NA	NA	NA
AXS48131.1\|204271_204973_+	histidine ABC transporter permease HisM	NA	NA	NA	NA
AXS48132.1\|204988_205762_+	histidine ABC transporter ATP-binding protein HisP	A0A076FI99	Aureococcus_anophage	1.5e-09	29.9
AXS48133.1\|205904_207851_+	autotransporter domain-containing protein	NA	NA	NA	NA
AXS48134.1\|208202_209126_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	8.4e-177	99.7
AXS48135.1\|209444_210464_-	type 1 fimbrial protein	NA	NA	NA	NA
AXS48136.1\|210484_212878_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
AXS48137.1\|212889_213585_-	molecular chaperone	NA	NA	NA	NA
AXS48138.1\|213643_214222_-	type 1 fimbrial protein	NA	NA	NA	NA
AXS48139.1\|214558_215706_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.0e-144	90.4
AXS48140.1\|216134_217058_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.7e-175	98.4
AXS48141.1\|217268_218405_+	recombinase	NA	NA	NA	NA
AXS48142.1\|218470_218788_-	hypothetical protein	NA	NA	NA	NA
AXS48143.1\|218907_219261_-	hypothetical protein	NA	NA	NA	NA
AXS48144.1\|219257_219530_-	hypothetical protein	NA	NA	NA	NA
AXS48145.1\|219936_220860_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.7e-174	98.7
AXS48146.1\|221078_222038_-	DNA replication protein	NA	NA	NA	NA
AXS48147.1\|222080_222488_-	hypothetical protein	NA	NA	NA	NA
AXS48148.1\|222497_222941_-	hypothetical protein	NA	NA	NA	NA
AXS48149.1\|224204_225173_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	4.3e-14	28.8
AXS48150.1\|227063_227414_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
AXS48151.1\|227410_227851_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-19	53.8
AXS48152.1\|228045_228228_+	DUF4113 domain-containing protein	A0A1W6JNT0	Morganella_phage	9.1e-11	57.1
AXS48153.1\|228288_228573_+	hypothetical protein	NA	NA	NA	NA
AXS48154.1\|228598_229522_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-173	98.0
AXS48169.1\|229546_229729_+	hypothetical protein	NA	NA	NA	NA
AXS48155.1\|230601_231573_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
AXS48156.1\|231572_232739_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP031808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: CP031808_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP031808_1

4486369-4486463

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP031808_1

>merge|CP031808|1|4486369-4486463|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>CP031808|1|1|4486369-4486463|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
CP031808.1\|AXS46974.1\|4488219_4488918_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
CP031808.1\|AXS46966.1\|4475508_4477011_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
CP031808.1\|AXS46969.1\|4480555_4483462_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
CP031808.1\|AXS46982.1\|4497009_4497489_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
CP031808.1\|AXS46981.1\|4495908_4496757_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
CP031808.1\|AXS46971.1\|4484196_4484736_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
CP031808.1\|AXS46975.1\|4488950_4489778_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
CP031808.1\|AXS46976.1\|4490021_4492370_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
CP031808.1\|AXS46968.1\|4478010_4480368_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
CP031808.1\|AXS47945.1\|4484698_4484887_+\|hypothetical-protein	unknown	unknown	unknown
CP031808.1\|AXS46970.1\|4483474_4484134_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
CP031808.1\|AXS46978.1\|4493716_4494706_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
CP031808.1\|AXS46965.1\|4473788_4475498_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
CP031808.1\|AXS46972.1\|4484915_4486280_-\|malate-permease	unknown	unknown	gnl\|CDD\|377030
CP031808.1\|AXS46967.1\|4477148_4477844_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
CP031808.1\|AXS46980.1\|4495526_4495904_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
CP031808.1\|AXS46973.1\|4486604_4488230_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
CP031808.1\|AXS46977.1\|4492424_4493711_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
CP031808.1\|AXS46979.1\|4494702_4495524_+\|ribosomal-RNA-small-subunit-methyltransferase-A	unknown	unknown	gnl\|CDD\|234708
CP031808.1\|AXS46964.1\|4472605_4473451_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717

Protein	Function_ID	Function_description	E-value
CP031808.1\|AXS46974.1\|4488219_4488918_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
CP031808.1\|AXS46966.1\|4475508_4477011_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
CP031808.1\|AXS46969.1\|4480555_4483462_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
CP031808.1\|AXS46982.1\|4497009_4497489_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
CP031808.1\|AXS46981.1\|4495908_4496757_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
CP031808.1\|AXS46971.1\|4484196_4484736_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	6.20047e-83
CP031808.1\|AXS46975.1\|4488950_4489778_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
CP031808.1\|AXS46976.1\|4490021_4492370_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
CP031808.1\|AXS46968.1\|4478010_4480368_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
CP031808.1\|AXS46970.1\|4483474_4484134_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
CP031808.1\|AXS46978.1\|4493716_4494706_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
CP031808.1\|AXS46965.1\|4473788_4475498_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
CP031808.1\|AXS46972.1\|4484915_4486280_-\|malate-permease	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
CP031808.1\|AXS46967.1\|4477148_4477844_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
CP031808.1\|AXS46980.1\|4495526_4495904_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
CP031808.1\|AXS46973.1\|4486604_4488230_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	7.63459e-173
CP031808.1\|AXS46977.1\|4492424_4493711_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
CP031808.1\|AXS46979.1\|4494702_4495524_+\|ribosomal-RNA-small-subunit-methyltransferase-A	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
CP031808.1\|AXS46964.1\|4472605_4473451_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0

>CP031808.1|AXS46972.1|4484915_4486280_-|malate-permease
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>CP031808.1|AXS47945.1|4484698_4484887_+|hypothetical-protein
MLTPAWAGVSTDINSSPTYDKCDSAWTVMMMVAIADRALIVTLNAEHLGYRTQIFSAFCSGK
>CP031808.1|AXS46971.1|4484196_4484736_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQAGLISRQAQGEAMRRCLLCDEPAHACARSRRHDTGLVVARVEQMIDAWFARD
>CP031808.1|AXS46970.1|4483474_4484134_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>CP031808.1|AXS46969.1|4480555_4483462_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIGSKRQQVMDALAQAGWRLDALRLIVVTHQ
>CP031808.1|AXS46968.1|4478010_4480368_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWSQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRTQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>CP031808.1|AXS46967.1|4477148_4477844_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>CP031808.1|AXS46966.1|4475508_4477011_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>CP031808.1|AXS46965.1|4473788_4475498_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>CP031808.1|AXS46964.1|4472605_4473451_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>CP031808.1|AXS46973.1|4486604_4488230_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>CP031808.1|AXS46974.1|4488219_4488918_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>CP031808.1|AXS46975.1|4488950_4489778_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>CP031808.1|AXS46976.1|4490021_4492370_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSNTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>CP031808.1|AXS46977.1|4492424_4493711_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>CP031808.1|AXS46978.1|4493716_4494706_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>CP031808.1|AXS46979.1|4494702_4495524_+|ribosomal-RNA-small-subunit-methyltransferase-A
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>CP031808.1|AXS46980.1|4495526_4495904_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>CP031808.1|AXS46981.1|4495908_4496757_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>CP031808.1|AXS46982.1|4497009_4497489_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1188781 : 1263103

Salmonella_phage(81.82%)

plate,capsid,head,tRNA,lysis,tail,integrase,portal

attL 1188622:1188668|attR 1222135:1222181

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1188622:1188668	attL	NA	NA	NA	NA
AXS43957.1\|1188781_1189996_-	hypothetical protein	E5G6K9	Salmonella_phage	7.6e-93	45.3
AXS43958.1\|1189979_1191014_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	5.7e-190	93.8
AXS43959.1\|1191016_1191649_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.7e-80	69.0
AXS43960.1\|1191765_1192008_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	1.4e-38	98.8
AXS43961.1\|1192040_1192550_+	hypothetical protein	A0A1S6L008	Salmonella_phage	5.4e-77	84.6
AXS47788.1\|1192557_1192758_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.5e-27	87.7
AXS43962.1\|1192721_1193063_+	hypothetical protein	A0A1S6L019	Salmonella_phage	4.2e-49	85.8
AXS43963.1\|1193130_1193364_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	3.5e-31	92.2
AXS43964.1\|1193363_1193591_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	2.5e-34	90.7
AXS43965.1\|1193587_1194475_+	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-111	71.5
AXS43966.1\|1194455_1196861_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	88.6
AXS43967.1\|1197032_1197221_+	hypothetical protein	A0A1S6L006	Salmonella_phage	1.8e-25	96.8
AXS47789.1\|1197234_1197468_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	3.9e-30	83.1
AXS43968.1\|1197543_1197801_+	hypothetical protein	NA	NA	NA	NA
AXS43969.1\|1197828_1198134_+	hypothetical protein	NA	NA	NA	NA
AXS43970.1\|1198167_1199604_+	hypothetical protein	NA	NA	NA	NA
AXS43971.1\|1199634_1200669_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.0e-174	89.7
AXS43972.1\|1200668_1202432_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	92.8
AXS43973.1\|1202572_1203406_+\|capsid	capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.1e-102	76.9
AXS43974.1\|1203422_1204475_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.7e-171	88.8
AXS43975.1\|1204478_1205129_+	hypothetical protein	E5G6M7	Salmonella_phage	9.6e-103	86.6
AXS43976.1\|1205225_1205690_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	7.1e-76	87.7
AXS43977.1\|1205689_1205893_+\|tail	phage tail protein	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
AXS43978.1\|1205896_1206112_+	hypothetical protein	E5G6N0	Salmonella_phage	1.0e-29	88.7
AXS43979.1\|1206092_1206602_+	lysozyme	E5G6N1	Salmonella_phage	7.3e-82	84.6
AXS43980.1\|1206606_1207035_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	3.9e-52	79.4
AXS43981.1\|1206964_1207168_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	2.8e-21	73.8
AXS43982.1\|1207130_1207553_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	7.7e-61	80.4
AXS43983.1\|1207545_1207986_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.7e-50	79.8
AXS43984.1\|1208088_1209291_+	SIR2 family protein	NA	NA	NA	NA
AXS43985.1\|1209366_1209939_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.8
AXS43986.1\|1209935_1210298_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	1.3e-48	84.7
AXS43987.1\|1210284_1211193_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	9.9e-106	66.9
AXS43988.1\|1211185_1211788_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	2.3e-58	61.0
AXS43989.1\|1213382_1213649_+	hypothetical protein	NA	NA	NA	NA
AXS43990.1\|1213756_1214836_+\|tail	phage tail protein	A0A0A7NV63	Enterobacteria_phage	6.4e-27	40.7
AXS43991.1\|1214970_1216143_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	3.3e-210	93.1
AXS43992.1\|1216152_1216668_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.4e-82	85.4
AXS43993.1\|1216720_1217020_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.6e-33	80.0
AXS43994.1\|1217034_1217154_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
AXS43995.1\|1217146_1219774_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.9e-125	44.9
AXS43996.1\|1219770_1220256_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.1e-58	77.6
AXS43997.1\|1220252_1221350_+	phage late control D family protein	E5G6Q3	Salmonella_phage	3.0e-173	84.2
AXS43998.1\|1221416_1221635_+	levansucrase regulator	Q53ZE7	Salmonella_virus	1.1e-26	72.2
AXS43999.1\|1221662_1222040_-	hypothetical protein	NA	NA	NA	NA
AXS44000.1\|1222643_1223126_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1222135:1222181	attR	NA	NA	NA	NA
AXS44001.1\|1223236_1223713_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXS44002.1\|1223702_1223993_+	RnfH family protein	NA	NA	NA	NA
AXS44003.1\|1224059_1224401_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXS44004.1\|1224548_1226210_-	DNA repair protein RecN	NA	NA	NA	NA
AXS44005.1\|1226296_1227175_-	NAD(+) kinase	NA	NA	NA	NA
AXS44006.1\|1227299_1227890_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXS44007.1\|1228010_1229297_-	DUF21 domain-containing protein	NA	NA	NA	NA
AXS44008.1\|1229316_1230108_-	inner membrane protein YpjD	NA	NA	NA	NA
AXS44009.1\|1230271_1231636_+	signal recognition particle protein	NA	NA	NA	NA
AXS44010.1\|1231895_1232144_+	30S ribosomal protein S16	NA	NA	NA	NA
AXS44011.1\|1232162_1232711_+	ribosome maturation factor RimM	NA	NA	NA	NA
AXS44012.1\|1232742_1233510_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AXS44013.1\|1233549_1233897_+	50S ribosomal protein L19	NA	NA	NA	NA
AXS44014.1\|1234016_1234475_+	DUF2946 domain-containing protein	NA	NA	NA	NA
AXS44015.1\|1234531_1235902_+	PepSY domain-containing protein	NA	NA	NA	NA
AXS44016.1\|1235910_1236393_-	OmpA family protein	NA	NA	NA	NA
AXS44017.1\|1236406_1237630_-	diguanylate cyclase	NA	NA	NA	NA
AXS44018.1\|1237622_1238132_-	YfiR family protein	NA	NA	NA	NA
AXS44019.1\|1238474_1239545_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
AXS44020.1\|1239554_1240676_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AXS44021.1\|1240738_1241611_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AXS44022.1\|1241607_1242768_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AXS47790.1\|1242868_1242916_-	hypothetical protein	NA	NA	NA	NA
AXS44023.1\|1243022_1243358_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AXS44024.1\|1243628_1244366_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AXS44025.1\|1244497_1245478_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
AXS44026.1\|1245474_1246206_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AXS44027.1\|1246335_1248909_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
AXS44028.1\|1254528_1254711_-	hypothetical protein	NA	NA	NA	NA
AXS44029.1\|1254791_1256090_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.1e-44	31.5
AXS44030.1\|1256093_1256417_-	YfiM family lipoprotein	NA	NA	NA	NA
AXS44031.1\|1256458_1257814_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AXS44032.1\|1257934_1260586_-	protein lysine acetyltransferase	NA	NA	NA	NA
AXS44033.1\|1260620_1261319_-	DTW domain-containing protein	NA	NA	NA	NA
AXS44034.1\|1261388_1261814_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
AXS44035.1\|1262017_1263103_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_2

1570866 : 1618600

Enterobacterial_phage(15.38%)

head,holin,portal,tail,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS44306.1\|1570866_1572045_-	recombinase	A0A2D1GN00	Marinobacter_phage	1.5e-29	30.5
AXS44307.1\|1572047_1572257_-	hypothetical protein	NA	NA	NA	NA
AXS44308.1\|1572288_1572561_-	hypothetical protein	K7PKM4	Enterobacterial_phage	5.2e-10	44.7
AXS44309.1\|1572560_1572779_-	hypothetical protein	G8C7S3	Escherichia_phage	5.4e-10	52.1
AXS44310.1\|1572771_1573512_-	hypothetical protein	A0A192Y6F5	Salmonella_phage	5.2e-28	62.8
AXS44311.1\|1573508_1573724_-	molecular chaperone DnaJ	R9TNC2	Aeromonas_phage	1.6e-38	98.6
AXS44312.1\|1574103_1574853_-	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA
AXS47800.1\|1574849_1575353_-	hypothetical protein	R9TME7	Aeromonas_phage	5.8e-07	34.1
AXS44313.1\|1575480_1576266_-	hypothetical protein	C7BGF1	Burkholderia_phage	2.4e-63	53.3
AXS44314.1\|1576258_1576459_-	hypothetical protein	NA	NA	NA	NA
AXS44315.1\|1576458_1576986_-	HD family hydrolase	A0A192Y8M4	Salmonella_phage	9.3e-64	70.9
AXS44316.1\|1577121_1577949_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	1.1e-130	84.4
AXS44317.1\|1578005_1578377_-	hypothetical protein	Q8HAA1	Salmonella_phage	4.8e-59	92.7
AXS44318.1\|1579305_1579779_+	hypothetical protein	NA	NA	NA	NA
AXS44319.1\|1580071_1580731_-	LexA family transcriptional repressor	U5P0T5	Shigella_phage	3.6e-113	86.3
AXS44320.1\|1580818_1581019_+	transcriptional regulator	U5P445	Shigella_phage	6.3e-21	78.5
AXS44321.1\|1581277_1581748_-	hypothetical protein	NA	NA	NA	NA
AXS44322.1\|1581827_1582376_+	DNA-binding protein	A0A1C9II13	Salmonella_phage	2.7e-66	68.5
AXS44323.1\|1582548_1582728_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.6e-13	67.3
AXS44324.1\|1582717_1583629_+	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	2.0e-53	74.5
AXS44325.1\|1583625_1584084_+	PerC family transcriptional regulator	NA	NA	NA	NA
AXS44326.1\|1584071_1585454_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	3.4e-105	48.4
AXS44327.1\|1585446_1587297_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.9e-196	51.4
AXS44328.1\|1587293_1587770_+\|protease	SOS-response repressor and protease LexA	K7PHB4	Enterobacterial_phage	5.5e-15	56.3
AXS44329.1\|1587766_1588165_+	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	3.6e-44	70.6
AXS44330.1\|1588254_1589076_+	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	4.0e-90	65.8
AXS47801.1\|1589157_1590144_+	DUF968 domain-containing protein	Q8SBE5	Shigella_phage	4.1e-89	48.6
AXS44331.1\|1590162_1590993_+	antitermination protein	K7P7B9	Enterobacteria_phage	2.9e-59	46.9
AXS44332.1\|1591202_1591394_+	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	3.5e-21	79.4
AXS44333.1\|1591543_1592593_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	8.9e-167	76.4
AXS44334.1\|1592627_1593326_-	DUF4145 domain-containing protein	A4JX50	Burkholderia_virus	1.9e-08	41.7
AXS47802.1\|1593722_1594478_+	hypothetical protein	A0A1B2I9V6	Erwinia_phage	2.0e-104	74.6
AXS47803.1\|1594783_1594999_+	hypothetical protein	NA	NA	NA	NA
AXS44335.1\|1595242_1595632_+	hypothetical protein	K7PHB9	Enterobacterial_phage	4.0e-48	80.3
AXS44336.1\|1595621_1595900_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.1e-34	75.0
AXS44337.1\|1595899_1596544_+	glycoside hydrolase family 19 protein	K7PJS7	Enterobacterial_phage	1.1e-85	75.0
AXS44338.1\|1596533_1596803_+	hypothetical protein	G8C7W1	Escherichia_phage	2.7e-19	62.1
AXS44339.1\|1596759_1596960_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	6.3e-21	80.6
AXS44340.1\|1597030_1597519_+	hypothetical protein	NA	NA	NA	NA
AXS44341.1\|1597603_1597993_+	hypothetical protein	Q71TL7	Escherichia_phage	3.0e-27	49.2
AXS44342.1\|1598390_1598636_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	5.1e-17	62.8
AXS44343.1\|1598794_1599136_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	3.5e-48	75.7
AXS44344.1\|1599319_1599784_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	4.8e-48	62.7
AXS44345.1\|1599737_1601474_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	1.7e-138	45.3
AXS44346.1\|1601480_1602800_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	1.4e-137	58.6
AXS44347.1\|1602775_1603483_+\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	6.4e-68	63.5
AXS44348.1\|1604757_1605012_+	hypothetical protein	NA	NA	NA	NA
AXS47804.1\|1605017_1605350_+\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	1.8e-12	32.5
AXS44349.1\|1605362_1605701_+\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	9.6e-38	67.9
AXS44350.1\|1605697_1606147_+	hypothetical protein	Q9MCS9	Enterobacteria_phage	1.1e-62	81.9
AXS44351.1\|1606143_1606491_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	1.4e-31	61.9
AXS44352.1\|1606547_1607252_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	7.2e-80	66.5
AXS44353.1\|1607282_1607687_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	2.6e-29	53.1
AXS44354.1\|1607689_1607995_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.1e-27	64.6
AXS44355.1\|1608067_1608301_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
AXS44356.1\|1608361_1611748_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.4e-306	58.2
AXS44357.1\|1611769_1612243_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.1e-55	62.7
AXS44358.1\|1612229_1612706_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	3.7e-51	65.8
AXS44359.1\|1612718_1613099_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.5e-58	81.0
AXS44360.1\|1613095_1616173_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	61.8
AXS44361.1\|1616251_1618600_+	SGNH/GDSL hydrolase family protein	A0A286S1P0	Klebsiella_phage	3.7e-35	62.6

DBSCAN-SWA_3

1730297 : 1737202

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS47811.1\|1730297_1731161_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AXS44458.1\|1731171_1731945_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.1e-26	36.7
AXS47812.1\|1732185_1733079_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AXS44459.1\|1733324_1734686_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AXS44460.1\|1735004_1735727_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AXS44461.1\|1735723_1737202_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_4

1777972 : 1786756

Klebsiella_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS44490.1\|1777972_1779601_+	hypothetical protein	K9L8K6	Klebsiella_phage	1.6e-114	43.7
AXS44491.1\|1779774_1781181_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.6e-38	28.7
AXS44492.1\|1781417_1782833_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	8.9e-53	30.8
AXS44493.1\|1782855_1784226_+	phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.9e-31	26.0
AXS44494.1\|1784389_1785556_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.2e-111	54.5
AXS44495.1\|1785748_1786756_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.5e-30	28.6

DBSCAN-SWA_5

2108928 : 2155078

Enterobacteria_phage(21.82%)

lysis,terminase,head,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS44789.1\|2108928_2110152_+	DUF4102 domain-containing protein	A0A1P8DTG6	Proteus_phage	4.3e-136	59.0
AXS44790.1\|2110091_2110334_-	hypothetical protein	A0A1P8DTG1	Proteus_phage	1.7e-12	54.8
AXS44791.1\|2110334_2110562_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.7e-12	52.2
AXS44792.1\|2110558_2111281_-	hypothetical protein	R9VWB9	Serratia_phage	1.8e-86	64.4
AXS44793.1\|2111277_2111550_-	hypothetical protein	A0A192Y6Q6	Salmonella_phage	1.1e-23	69.3
AXS44794.1\|2111546_2111768_-	hypothetical protein	NA	NA	NA	NA
AXS44795.1\|2111764_2112421_-	DNA methyltransferase	G8C7S6	Escherichia_phage	9.3e-114	88.0
AXS44796.1\|2112417_2112723_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXS44797.1\|2112719_2113010_-	hypothetical protein	NA	NA	NA	NA
AXS44798.1\|2112993_2113647_-	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	3.0e-64	62.3
AXS44799.1\|2113798_2113996_-	thioredoxin reductase	NA	NA	NA	NA
AXS44800.1\|2114003_2114975_-	hypothetical protein	M9P0E1	Enterobacteria_phage	1.4e-70	96.6
AXS44801.1\|2115054_2115261_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
AXS44802.1\|2115696_2115900_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	5.9e-19	70.1
AXS44803.1\|2115939_2116857_-	hypothetical protein	NA	NA	NA	NA
AXS44804.1\|2116853_2117441_-	hypothetical protein	NA	NA	NA	NA
AXS44805.1\|2117773_2117893_-	hypothetical protein	NA	NA	NA	NA
AXS44806.1\|2117915_2118614_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.1e-108	84.1
AXS44807.1\|2118725_2118953_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.4e-24	77.1
AXS44808.1\|2118992_2119214_+	transcriptional regulator	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
AXS44809.1\|2119299_2120154_+	replication protein	K7PGT1	Enterobacteria_phage	1.4e-61	54.5
AXS44810.1\|2120138_2121011_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	1.3e-94	69.8
AXS44811.1\|2121007_2121301_+	protein ren	O48423	Enterobacteria_phage	3.3e-26	65.6
AXS44812.1\|2121297_2121726_+	hypothetical protein	A0A220NRQ7	Escherichia_phage	2.9e-15	57.0
AXS47829.1\|2121728_2122025_+	DUF4406 domain-containing protein	A0A222YYT7	Escherichia_phage	3.2e-29	65.2
AXS47830.1\|2122219_2122687_+	hypothetical protein	A0A2R2Z312	Escherichia_phage	6.6e-37	51.3
AXS44813.1\|2122686_2123202_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	4.2e-69	75.8
AXS44814.1\|2123198_2123831_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.1e-26	59.0
AXS44815.1\|2123830_2124019_+	hypothetical protein	R9TNE4	Aeromonas_phage	2.6e-21	81.7
AXS44816.1\|2124123_2124324_+	hypothetical protein	NA	NA	NA	NA
AXS44817.1\|2124333_2124591_+	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	6.4e-26	74.0
AXS44818.1\|2124697_2125294_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	2.8e-56	53.8
AXS47831.1\|2125299_2125470_+	NinE family protein	G8C7V4	Escherichia_phage	2.8e-14	71.4
AXS44819.1\|2125462_2126098_+	NinG family protein	M9NYX8	Enterobacteria_phage	2.9e-80	77.8
AXS44820.1\|2126094_2126235_+	YlcG family protein	NA	NA	NA	NA
AXS44821.1\|2126231_2126921_+	antiterminator	I6PDF8	Cronobacter_phage	9.6e-61	55.4
AXS44822.1\|2127694_2127964_+\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-32	78.3
AXS47832.1\|2127941_2128439_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	4.8e-78	82.4
AXS44823.1\|2128435_2128903_+\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.2e-56	73.5
AXS44824.1\|2129146_2129866_+	hypothetical protein	K7PH02	Enterobacteria_phage	4.0e-17	56.6
AXS44825.1\|2130192_2130828_+	hypothetical protein	I6S676	Salmonella_phage	2.1e-102	81.6
AXS44826.1\|2130859_2131345_+	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	4.1e-66	79.5
AXS44827.1\|2131346_2133023_+\|terminase	terminase	H9C191	Pectobacterium_phage	5.7e-248	74.3
AXS44828.1\|2133023_2134544_+	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	9.7e-106	45.0
AXS44829.1\|2134596_2135295_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	3.6e-63	53.1
AXS44830.1\|2135298_2136468_+	DUF2213 domain-containing protein	A0A219YCD3	Aeromonas_phage	5.8e-58	37.3
AXS44831.1\|2136469_2136952_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	7.7e-33	49.7
AXS44832.1\|2136951_2137989_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	3.8e-85	50.6
AXS44833.1\|2137990_2138317_+	hypothetical protein	H9C0V9	Aeromonas_phage	3.6e-10	42.5
AXS44834.1\|2138316_2138760_+	DUF4054 domain-containing protein	A0A1X9SF97	Acinetobacter_phage	4.3e-14	40.5
AXS44835.1\|2138762_2139326_+	hypothetical protein	H9C0W2	Aeromonas_phage	3.0e-20	33.3
AXS47833.1\|2139322_2139691_+	hypothetical protein	Q6UJ26	Burkholderia_virus	9.5e-07	29.8
AXS44836.1\|2139672_2140224_+	hypothetical protein	NA	NA	NA	NA
AXS44837.1\|2140227_2141709_+	DUF3383 domain-containing protein	Q2NPD0	Xanthomonas_phage	2.3e-59	34.6
AXS44838.1\|2141708_2142152_+	hypothetical protein	NA	NA	NA	NA
AXS44839.1\|2142332_2142863_+	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	6.4e-89	94.9
AXS44840.1\|2142924_2143401_+	hypothetical protein	A0A068CGG2	Acinetobacter_phage	5.5e-07	29.8
AXS44841.1\|2143605_2145564_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	2.2e-41	35.3
AXS44842.1\|2145567_2146407_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	7.7e-28	33.3
AXS44843.1\|2146408_2146714_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	3.6e-20	48.5
AXS44844.1\|2146710_2147580_+	hypothetical protein	NA	NA	NA	NA
AXS44845.1\|2147569_2148160_+	hypothetical protein	A0A077KAY0	Edwardsiella_phage	4.3e-25	36.4
AXS44846.1\|2148613_2148901_+	hypothetical protein	NA	NA	NA	NA
AXS44847.1\|2148963_2149320_+	hypothetical protein	NA	NA	NA	NA
AXS44848.1\|2149327_2150560_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	6.7e-105	50.7
AXS44849.1\|2150552_2151140_+	DUF2612 domain-containing protein	A0A077K9U8	Edwardsiella_phage	5.0e-34	43.4
AXS44850.1\|2151141_2152185_+	hypothetical protein	A0A077KC23	Edwardsiella_phage	4.4e-17	41.5
AXS44851.1\|2154521_2154761_+	hypothetical protein	K7P7N3	Enterobacteria_phage	2.1e-15	50.6
AXS44852.1\|2154760_2155078_+	hypothetical protein	K7PGV5	Enterobacterial_phage	4.8e-23	53.5

DBSCAN-SWA_6

2748029 : 2754459

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS45415.1\|2748029_2749118_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	5.2e-210	99.7
AXS45416.1\|2749204_2749465_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AXS45417.1\|2749756_2750623_+	class A beta-lactamase SHV-187	A0A077SL40	Escherichia_phage	1.7e-155	99.6
AXS45418.1\|2750643_2751405_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AXS45419.1\|2751395_2751629_+	hypothetical protein	NA	NA	NA	NA
AXS45420.1\|2752580_2753846_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
AXS45421.1\|2753838_2754459_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

2947990 : 3019680

Klebsiella_phage(34.69%)

plate,terminase,capsid,head,holin,tail,transposase,protease,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS45604.1\|2947990_2949076_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
AXS45605.1\|2949039_2950794_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
AXS45606.1\|2950872_2952465_-	type VI secretion system protein TssA	NA	NA	NA	NA
AXS45607.1\|2952461_2955911_-	type VI secretion protein VasK	NA	NA	NA	NA
AXS45608.1\|2955900_2957082_-	hypothetical protein	NA	NA	NA	NA
AXS45609.1\|2957030_2957288_-	PAAR domain-containing protein	NA	NA	NA	NA
AXS45610.1\|2957330_2959730_-	DUF2235 domain-containing protein	NA	NA	NA	NA
AXS45611.1\|2959717_2960248_-	DUF3304 domain-containing protein	NA	NA	NA	NA
AXS45612.1\|2960272_2961049_-	DUF4123 domain-containing protein	NA	NA	NA	NA
AXS45613.1\|2961052_2963431_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.4e-18	33.0
AXS45614.1\|2963423_2966078_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	7.7e-98	33.4
AXS45615.1\|2966342_2966834_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
AXS45616.1\|2966838_2968545_-	OmpA family protein	NA	NA	NA	NA
AXS45617.1\|2968541_2969231_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AXS47868.1\|2969227_2970568_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AXS45618.1\|2970580_2972125_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
AXS45619.1\|2972167_2972659_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AXS45620.1\|2973504_2973753_+	DinI family protein	S5MQI1	Escherichia_phage	1.4e-25	70.4
AXS45621.1\|2973975_2974257_-	hypothetical protein	NA	NA	NA	NA
AXS45622.1\|2974803_2975226_-	hypothetical protein	K7P834	Enterobacteria_phage	8.0e-26	44.5
AXS45623.1\|2975303_2975852_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	5.8e-93	97.8
AXS45624.1\|2975943_2976687_+	hypothetical protein	NA	NA	NA	NA
AXS45625.1\|2976816_2977923_+	hypothetical protein	NA	NA	NA	NA
AXS45626.1\|2978329_2980936_-	SGNH/GDSL hydrolase family protein	A0A286S1P0	Klebsiella_phage	7.9e-47	76.2
AXS45627.1\|2981012_2984090_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	61.8
AXS45628.1\|2984086_2984467_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.6e-57	80.2
AXS45629.1\|2984479_2984956_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	4.8e-51	65.8
AXS45630.1\|2984942_2985416_-	hypothetical protein	A0A286S298	Klebsiella_phage	7.1e-55	61.4
AXS45631.1\|2985437_2989016_-\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	5.4e-248	62.7
AXS45632.1\|2989087_2990011_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.1e-172	96.7
AXS45633.1\|2990144_2990666_-	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	1.7e-09	45.2
AXS45634.1\|2990740_2991046_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	4.7e-28	64.6
AXS45635.1\|2991048_2991453_-\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	7.4e-29	53.1
AXS45636.1\|2991483_2992188_-\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	1.5e-80	66.9
AXS45637.1\|2992244_2992592_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	8.9e-31	60.2
AXS45638.1\|2992588_2993038_-	hypothetical protein	Q9MCS9	Enterobacteria_phage	3.9e-63	83.2
AXS45639.1\|2993034_2993373_-\|head,tail	head-tail adaptor protein	A0A2H4JHK5	uncultured_Caudovirales_phage	9.2e-41	73.2
AXS45640.1\|2993384_2993711_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	6.2e-42	69.4
AXS45641.1\|2993710_2993953_-	hypothetical protein	A0A1P8DTJ1	Proteus_phage	1.6e-10	68.1
AXS45642.1\|2993995_2995213_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	3.6e-196	87.9
AXS45643.1\|2995222_2996071_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	3.0e-136	89.6
AXS45644.1\|2996084_2997392_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	4.9e-215	85.7
AXS45645.1\|2997391_2999134_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	8.2e-141	46.0
AXS45646.1\|2999087_2999552_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	3.7e-48	61.4
AXS45647.1\|2999734_3000076_-	HNH endonuclease	K7P7P4	Enterobacteria_phage	2.1e-48	75.7
AXS47869.1\|3000177_3000582_-	DUF2513 domain-containing protein	NA	NA	NA	NA
AXS45648.1\|3000694_3000880_-	hypothetical protein	NA	NA	NA	NA
AXS45649.1\|3001008_3001254_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
AXS45650.1\|3002158_3002509_-	hypothetical protein	R9TPM9	Aeromonas_phage	3.5e-11	38.1
AXS45651.1\|3002505_3003003_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	3.7e-78	85.2
AXS45652.1\|3003002_3003218_-\|holin	holin	A5LH82	Enterobacteria_phage	2.7e-30	88.7
AXS45653.1\|3004049_3004496_+	hypothetical protein	NA	NA	NA	NA
AXS47870.1\|3004401_3004659_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	1.3e-42	100.0
AXS45654.1\|3004812_3005595_-	antitermination protein	F1C595	Cronobacter_phage	3.8e-114	79.1
AXS45655.1\|3005591_3006068_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	2.6e-89	98.7
AXS45656.1\|3006064_3007027_-	DNA primase	A0A286N2Q0	Klebsiella_phage	1.3e-183	99.7
AXS45657.1\|3007028_3008687_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	99.1
AXS45658.1\|3008996_3009281_-	hypothetical protein	A0A1B5FPB9	Escherichia_phage	3.0e-32	72.3
AXS45659.1\|3009405_3009639_-	Cro/Cl family transcriptional regulator	A0A1B5FPK9	Escherichia_phage	2.2e-17	63.9
AXS45660.1\|3009779_3010454_+	helix-turn-helix transcriptional regulator	A0A1B5FPF4	Escherichia_phage	8.7e-99	78.6
AXS45661.1\|3010617_3011031_+	hypothetical protein	NA	NA	NA	NA
AXS45662.1\|3011213_3011438_+	hypothetical protein	NA	NA	NA	NA
AXS45663.1\|3011438_3011804_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	5.8e-57	97.5
AXS45664.1\|3011796_3012051_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	2.5e-38	92.9
AXS45665.1\|3012237_3012678_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.2e-56	78.1
AXS45666.1\|3012718_3013237_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.3e-94	99.4
AXS45667.1\|3013242_3013968_+	DNA-binding protein	A0A286S260	Klebsiella_phage	3.4e-109	85.0
AXS45668.1\|3013957_3014182_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	1.8e-29	90.5
AXS45669.1\|3014821_3015064_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
AXS45670.1\|3015044_3016226_-	DUF4102 domain-containing protein	A0A0M4QX09	Salmonella_phage	6.2e-201	84.0
AXS45671.1\|3016422_3016971_+	DJ-1/PfpI family protein	NA	NA	NA	NA
AXS45672.1\|3017169_3018702_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	8.8e-22	30.0
AXS45673.1\|3018918_3019680_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.1e-20	32.1

DBSCAN-SWA_8

3170248 : 3265817

106

Klebsiella_phage(46.81%)

terminase,capsid,head,tRNA,holin,tail,transposase,integrase,portal

attL 3162778:3162795|attR 3274083:3274100

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3162778:3162795	attL	NA	NA	NA	NA
AXS45816.1\|3170248_3170749_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
AXS45817.1\|3170865_3171312_+	DUF441 domain-containing protein	NA	NA	NA	NA
AXS47876.1\|3171295_3172087_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXS45818.1\|3172188_3173373_+	cyanate MFS transporter	NA	NA	NA	NA
AXS45819.1\|3173404_3174097_-	hypothetical protein	NA	NA	NA	NA
AXS45820.1\|3174242_3174752_+	DUF523 domain-containing protein	NA	NA	NA	NA
AXS45821.1\|3174738_3175095_+	DUF488 domain-containing protein	NA	NA	NA	NA
AXS45822.1\|3175084_3175324_-	DUF333 domain-containing protein	NA	NA	NA	NA
AXS45823.1\|3175624_3176638_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
AXS45824.1\|3176695_3176797_+	hypothetical protein	NA	NA	NA	NA
AXS47877.1\|3176796_3176871_+	protein YoaJ	NA	NA	NA	NA
AXS45825.1\|3176988_3177114_+	hypothetical protein	NA	NA	NA	NA
AXS45826.1\|3177172_3177436_-	DUF2534 family protein	NA	NA	NA	NA
AXS45827.1\|3177566_3178205_-	leucine efflux protein	NA	NA	NA	NA
AXS45828.1\|3178294_3179209_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
AXS45829.1\|3179424_3179616_+	hypothetical protein	NA	NA	NA	NA
AXS45830.1\|3179870_3180914_-	type II asparaginase	NA	NA	NA	NA
AXS45831.1\|3181216_3182425_+	HD domain-containing protein	NA	NA	NA	NA
AXS45832.1\|3182498_3184283_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
AXS45833.1\|3184289_3185180_-	LysR family transcriptional regulator	NA	NA	NA	NA
AXS45834.1\|3185300_3186809_+	UbiD family decarboxylase	NA	NA	NA	NA
AXS45835.1\|3187119_3187806_-	EAL domain-containing protein	NA	NA	NA	NA
AXS45836.1\|3188203_3188383_-	hypothetical protein	NA	NA	NA	NA
AXS45837.1\|3188422_3189055_-	DNA-binding protein	NA	NA	NA	NA
AXS45838.1\|3189621_3189819_+	hypothetical protein	NA	NA	NA	NA
AXS45839.1\|3189934_3190945_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
AXS45840.1\|3190941_3192348_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
AXS45841.1\|3192403_3193291_-	manganese catalase family protein	NA	NA	NA	NA
AXS45842.1\|3193307_3193814_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AXS45843.1\|3193840_3194335_-	ferritin-like domain-containing protein	NA	NA	NA	NA
AXS45844.1\|3194425_3194611_-	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA
AXS45845.1\|3195233_3196427_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
AXS45846.1\|3196539_3196767_+	DUF1272 domain-containing protein	NA	NA	NA	NA
AXS45847.1\|3196787_3196973_-	hypothetical protein	NA	NA	NA	NA
AXS45848.1\|3197216_3197540_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
AXS45849.1\|3197532_3197925_+	amino acid-binding protein	NA	NA	NA	NA
AXS45850.1\|3197921_3198635_+	ArsR family transcriptional regulator	NA	NA	NA	NA
AXS45851.1\|3198907_3199060_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
AXS45852.1\|3199380_3199704_-	hypothetical protein	NA	NA	NA	NA
AXS45853.1\|3199709_3200402_-	EAL domain-containing protein	NA	NA	NA	NA
AXS45854.1\|3200756_3201815_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.1e-14	31.7
AXS45855.1\|3202238_3203666_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	3.0e-101	55.5
AXS45856.1\|3203734_3216439_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	49.0
AXS45857.1\|3216501_3217107_-\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	4.9e-77	71.8
AXS47878.1\|3217158_3217494_-	hypothetical protein	Q6UAW3	Klebsiella_phage	2.1e-21	44.1
AXS45858.1\|3217529_3218240_-	peptidase P60	Q6UAW4	Klebsiella_phage	6.5e-137	90.3
AXS45859.1\|3218241_3218997_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	6.1e-125	80.5
AXS45860.1\|3218993_3219332_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.4e-57	88.4
AXS45861.1\|3219331_3222667_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
AXS45862.1\|3222666_3222879_-	hypothetical protein	Q6UAW9	Klebsiella_phage	3.7e-32	88.9
AXS45863.1\|3222899_3223265_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
AXS45864.1\|3223322_3223784_-\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
AXS45865.1\|3223815_3224217_-	hypothetical protein	Q6UAX1	Klebsiella_phage	1.1e-61	93.2
AXS45866.1\|3224213_3224603_-	hypothetical protein	Q6UAX2	Klebsiella_phage	4.0e-56	84.5
AXS45867.1\|3224583_3224922_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	5.6e-54	91.1
AXS45868.1\|3224918_3225236_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
AXS45869.1\|3225216_3225477_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.6e-21	60.5
AXS45870.1\|3225535_3226822_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.4e-216	89.3
AXS45871.1\|3226899_3227820_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	1.6e-148	87.9
AXS45872.1\|3227856_3229116_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
AXS45873.1\|3229115_3229295_-	hypothetical protein	Q6UAX9	Klebsiella_phage	6.8e-11	57.9
AXS45874.1\|3229288_3231010_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	7.2e-190	57.2
AXS45875.1\|3231009_3231444_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
AXS45876.1\|3231693_3232125_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.3
AXS45877.1\|3232121_3232439_-	hypothetical protein	NA	NA	NA	NA
AXS45878.1\|3232390_3232753_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	3.4e-57	82.5
AXS47879.1\|3232979_3233456_-	DUF2514 domain-containing protein	NA	NA	NA	NA
AXS45879.1\|3233488_3234019_-	lysozyme	G9L6J6	Escherichia_phage	9.6e-85	84.4
AXS45880.1\|3233996_3234233_-\|holin	holin	A5LH82	Enterobacteria_phage	3.7e-28	85.5
AXS47880.1\|3235245_3235689_+	hypothetical protein	NA	NA	NA	NA
AXS45881.1\|3235690_3236560_+	hypothetical protein	NA	NA	NA	NA
AXS45882.1\|3236588_3236933_-	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	1.0e-55	85.0
AXS45883.1\|3236945_3237977_-	DUF968 domain-containing protein	S5MW46	Escherichia_phage	1.6e-96	49.6
AXS45884.1\|3237976_3238180_-	hypothetical protein	NA	NA	NA	NA
AXS45885.1\|3238176_3238569_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
AXS45886.1\|3238609_3238900_-	hypothetical protein	H6WRY6	Salmonella_phage	1.4e-16	56.9
AXS45887.1\|3238911_3239145_-	DinI family protein	K7PM44	Enterobacteria_phage	1.3e-25	72.4
AXS45888.1\|3239583_3240273_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	9.1e-11	28.0
AXS45889.1\|3240343_3241090_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	3.0e-07	29.8
AXS45890.1\|3241412_3241640_+	DUF1737 domain-containing protein	NA	NA	NA	NA
AXS45891.1\|3242086_3243850_-	EAL domain-containing protein	NA	NA	NA	NA
AXS45892.1\|3244163_3244604_-	PerC family transcriptional regulator	NA	NA	NA	NA
AXS45893.1\|3244617_3245082_-	replication protein	A0A0U2JGJ0	Escherichia_phage	3.1e-63	71.5
AXS45894.1\|3245074_3246058_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	2.0e-43	54.6
AXS45895.1\|3246109_3246664_-	hypothetical protein	NA	NA	NA	NA
AXS45896.1\|3246666_3246882_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.0e-17	57.5
AXS45897.1\|3246983_3247373_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.7e-35	60.2
AXS45898.1\|3247987_3248206_+	hypothetical protein	NA	NA	NA	NA
AXS45899.1\|3248215_3248410_+	DUF1482 family protein	NA	NA	NA	NA
AXS45900.1\|3248452_3248797_+	transcriptional regulator	NA	NA	NA	NA
AXS45901.1\|3248938_3251077_+	exonuclease	S4TNL0	Salmonella_phage	1.5e-99	42.9
AXS45902.1\|3251129_3251375_+	excisionase	NA	NA	NA	NA
AXS45903.1\|3251355_3252483_+\|integrase	integrase	O21925	Phage_21	3.3e-119	58.4
AXS45904.1\|3252600_3253851_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
AXS45905.1\|3254091_3254742_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
AXS45906.1\|3254758_3255217_+	NUDIX hydrolase	NA	NA	NA	NA
AXS47881.1\|3255273_3256380_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
AXS45907.1\|3256434_3257076_+	lysogenization protein HflD	NA	NA	NA	NA
AXS45908.1\|3257079_3258450_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	45.3
AXS45909.1\|3258504_3258867_-	cupin domain-containing protein	NA	NA	NA	NA
AXS45910.1\|3258950_3259757_-	AraC family transcriptional regulator	NA	NA	NA	NA
AXS45911.1\|3260040_3260712_+	two-component system response regulator PhoP	NA	NA	NA	NA
AXS45912.1\|3260711_3262178_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
AXS45913.1\|3262263_3263385_+	cupin domain-containing protein	NA	NA	NA	NA
AXS45914.1\|3263696_3265059_+\|transposase	IS3-like element ISKpn1 family transposase	A0A1B1P773	Bacillus_phage	1.4e-74	51.5
AXS45915.1\|3265325_3265817_-\|transposase	transposase	NA	NA	NA	NA
3274083:3274100	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3522835 : 3532298

Brazilian_cedratvirus(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS46127.1\|3522835_3524557_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
AXS46128.1\|3524601_3525303_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXS46129.1\|3525656_3525875_+	translation initiation factor IF-1	NA	NA	NA	NA
AXS46130.1\|3525994_3528274_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AXS46131.1\|3528304_3528622_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AXS46132.1\|3528947_3529169_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AXS46133.1\|3529123_3529306_-	hypothetical protein	NA	NA	NA	NA
AXS46134.1\|3529245_3531186_-	MacB family efflux pump subunit	G9BWD6	Planktothrix_phage	2.9e-38	41.4
AXS46135.1\|3531182_3532298_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP031809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP031808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection