CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP031848	Marinobacter sp. Arc7-DN-1 chromosome, complete genome	0 crisprs	WYL,DEDDh,DinG,cas3,RT,csa3	0	0	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

337591 : 370834

Escherichia_phage(40.0%)

transposase,integrase

attL 334576:334590|attR 362856:362870

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
334576:334590	attL	NA	NA	NA	NA
AXS81866.1\|337591_338332_+\|integrase	site-specific integrase	B3GAN2	uncultured_virus	4.9e-18	32.9
AXS81867.1\|338458_338785_+	hypothetical protein	NA	NA	NA	NA
AXS81868.1\|339510_341049_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.5e-24	30.7
AXS81869.1\|341834_343379_+	hypothetical protein	NA	NA	NA	NA
AXS81870.1\|343371_344373_+	hypothetical protein	NA	NA	NA	NA
AXS81871.1\|344671_345151_+	hypothetical protein	NA	NA	NA	NA
AXS81872.1\|345789_346083_+	hypothetical protein	NA	NA	NA	NA
AXS81873.1\|346312_346537_-	hypothetical protein	NA	NA	NA	NA
AXS81874.1\|346428_346788_-\|transposase	transposase	Q8W6R2	Burkholderia_virus	8.7e-05	37.9
AXS81875.1\|349034_349331_-\|transposase	transposase	NA	NA	NA	NA
AXS81876.1\|350317_351673_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
AXS81877.1\|351845_352811_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
AXS81878.1\|352817_354548_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.9e-17	31.2
AXS81879.1\|354544_355639_+	ABC transporter permease	NA	NA	NA	NA
AXS85140.1\|355644_356742_+	ABC transporter permease	NA	NA	NA	NA
AXS81880.1\|357914_358859_+\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	5.0e-92	56.1
AXS81881.1\|359767_359995_+	hypothetical protein	NA	NA	NA	NA
AXS81882.1\|364378_365464_-	DNA-binding protein	NA	NA	NA	NA
362856:362870	attR	NA	NA	NA	NA
AXS81883.1\|365591_366086_+	hypothetical protein	NA	NA	NA	NA
AXS81884.1\|370549_370834_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1991743 : 2053839

Micromonas_pusilla_virus(11.76%)

transposase,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS85248.1\|1991743_1993678_-\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	1.7e-115	48.6
AXS83231.1\|1994084_1994396_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
AXS83232.1\|1994478_1994958_-	transcription elongation factor GreA	NA	NA	NA	NA
AXS83233.1\|1994962_1998181_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
AXS83234.1\|1998261_1999392_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	3.7e-49	34.3
AXS83235.1\|1999611_2000412_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
AXS83236.1\|2000460_2001588_-	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	5.5e-29	35.3
AXS83237.1\|2001666_2003592_-	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	9.0e-149	52.8
AXS83238.1\|2003682_2004282_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
AXS83239.1\|2004559_2006239_+	DNA repair protein RecN	NA	NA	NA	NA
AXS83240.1\|2006357_2006768_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA
AXS83241.1\|2006896_2007223_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AXS85249.1\|2007225_2007504_-	RnfH family protein	NA	NA	NA	NA
AXS83242.1\|2007503_2007950_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AXS83243.1\|2008022_2009648_-	sodium-dependent transporter	NA	NA	NA	NA
AXS83244.1\|2009836_2010316_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	9.1e-26	42.5
AXS83245.1\|2010456_2011875_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA
AXS83246.1\|2012509_2013742_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	9.1e-94	45.8
AXS83247.1\|2013773_2013992_+	hypothetical protein	NA	NA	NA	NA
AXS83248.1\|2014007_2014613_+	hypothetical protein	NA	NA	NA	NA
AXS83249.1\|2015119_2015320_+	AlpA family transcriptional regulator	NA	NA	NA	NA
AXS83250.1\|2015312_2015711_+	hypothetical protein	NA	NA	NA	NA
AXS83251.1\|2015710_2016631_+	hypothetical protein	A0A1B0VML8	Pseudomonas_phage	3.8e-52	44.0
AXS83252.1\|2016627_2018106_+	DUF3987 domain-containing protein	NA	NA	NA	NA
AXS83253.1\|2018105_2018660_+	hypothetical protein	NA	NA	NA	NA
AXS83254.1\|2019818_2020031_+	hypothetical protein	NA	NA	NA	NA
AXS83255.1\|2020640_2020853_+	hypothetical protein	NA	NA	NA	NA
AXS83256.1\|2021463_2024220_+\|tail	phage tail tape measure protein	A0A2D1GMZ2	Marinobacter_phage	3.2e-131	37.4
AXS83257.1\|2024246_2024489_+	hypothetical protein	NA	NA	NA	NA
AXS83258.1\|2025289_2025568_+	hypothetical protein	NA	NA	NA	NA
AXS83259.1\|2025736_2028142_+	SAM-dependent DNA methyltransferase	A0A220A2U4	Liberibacter_phage	1.3e-80	38.1
AXS83260.1\|2028134_2029454_+	restriction endonuclease subunit S	NA	NA	NA	NA
AXS83261.1\|2029489_2029942_+	appr-1-p processing domain-containing protein	A0A2I7QNM6	Vibrio_phage	5.4e-20	37.4
AXS83262.1\|2030134_2030569_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	8.9e-12	32.2
AXS83263.1\|2030679_2032203_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.3e-45	30.5
AXS83264.1\|2032797_2033235_-\|transposase	transposase	NA	NA	NA	NA
AXS83265.1\|2033255_2033540_-\|transposase	transposase	NA	NA	NA	NA
AXS83266.1\|2033567_2033777_-	hypothetical protein	NA	NA	NA	NA
AXS83267.1\|2033875_2034685_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AXS83268.1\|2034883_2035102_-	hypothetical protein	NA	NA	NA	NA
AXS83269.1\|2035184_2035757_-	hypothetical protein	NA	NA	NA	NA
AXS83270.1\|2035950_2039283_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	2.3e-67	26.3
AXS83271.1\|2039279_2039978_+	M48 family peptidase	NA	NA	NA	NA
AXS83272.1\|2040324_2040792_+	hypothetical protein	NA	NA	NA	NA
AXS83273.1\|2040795_2041338_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
AXS83274.1\|2041334_2042426_+	beta family protein	NA	NA	NA	NA
AXS83275.1\|2042414_2043125_-	protein cII	NA	NA	NA	NA
AXS83276.1\|2043316_2043940_+	hypothetical protein	NA	NA	NA	NA
AXS83277.1\|2044161_2045049_-	hydrolase or metal-binding protein	NA	NA	NA	NA
AXS83278.1\|2045111_2046152_-	endonuclease	A0A139ZPJ9	Marinitoga_camini_virus	1.6e-46	45.4
AXS83279.1\|2046199_2047162_-	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	6.5e-63	44.1
AXS83280.1\|2047193_2047544_-	hypothetical protein	NA	NA	NA	NA
AXS83281.1\|2047734_2049684_+	DUF2813 domain-containing protein	NA	NA	NA	NA
AXS83282.1\|2049700_2051575_+	ATP-dependent helicase	G3MA40	Bacillus_virus	2.2e-14	21.1
AXS83283.1\|2051834_2052224_-	hypothetical protein	NA	NA	NA	NA
AXS83284.1\|2052300_2053839_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.5e-24	30.7

DBSCAN-SWA_3

3610844 : 3618469

Vibrio_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXS84565.1\|3610844_3611444_-	HNH endonuclease	A0A1S6L216	Vibrio_phage	7.6e-30	42.1
AXS84566.1\|3611978_3612377_+	hypothetical protein	NA	NA	NA	NA
AXS84567.1\|3612428_3612626_+	hypothetical protein	I7KLR2	Campylobacter_virus	1.5e-06	66.7
AXS84568.1\|3612619_3612808_+	hypothetical protein	NA	NA	NA	NA
AXS84569.1\|3613904_3615443_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	5.5e-24	30.7
AXS84570.1\|3615429_3616170_+	AAA family ATPase	U5N3V8	Enterobacteria_phage	5.7e-43	39.9
AXS84571.1\|3616451_3616967_+	dihydrofolate reductase	G3MBI7	Bacillus_virus	4.7e-28	39.9
AXS84572.1\|3616945_3618469_-	ATP-dependent helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.6e-52	33.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage