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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP020380 Clostridioides difficile strain DSM 102978 chromosome, complete genome 18 crisprs csa3,WYL,c2c9_V-U4,cas14j,cas3,DEDDh,DinG,cas14k,RT,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2 14 87 15 1

Results visualization

1. CP020380
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_1 31917-32002 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_2 128788-128877 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_3 135678-135767 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_4 144217-144295 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_5 151683-151772 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_6 300411-300638 Orphan NA:I-A
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_7 922846-923024 TypeV NA
2 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_9 1661699-1661858 Orphan I-A
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_10 1769637-1769994 Orphan I-A
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_11 1945616-1946827 Orphan I-A
18 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_12 2814277-2814434 TypeV NA
2 spacers
cas14j,cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_13 2895008-2895235 Orphan I-A
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_14 3108072-3108562 Orphan I-A
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_15 3110365-3110588 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_20 3460709-3463696 Unclear I-A
45 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_21 3744200-3744295 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_22 3771110-3771343 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP020380_23 3830954-3831599 Orphan I-A
9 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP020380_1 1.1|31941|38|CP020380|CRISPRCasFinder 31941-31978 38 CP020380.1 4105958-4105995 0 1.0
CP020380_2 2.1|128816|34|CP020380|CRISPRCasFinder 128816-128849 34 CP020380.1 146256-146289 0 1.0
CP020380_2 2.1|128816|34|CP020380|CRISPRCasFinder 128816-128849 34 CP020380.1 1229318-1229351 0 1.0
CP020380_2 2.1|128816|34|CP020380|CRISPRCasFinder 128816-128849 34 CP020380.1 3970001-3970034 0 1.0
CP020380_2 2.1|128816|34|CP020380|CRISPRCasFinder 128816-128849 34 CP020380.1 4105950-4105983 0 1.0
CP020380_3 3.1|135706|34|CP020380|CRISPRCasFinder 135706-135739 34 CP020380.1 146256-146289 0 1.0
CP020380_3 3.1|135706|34|CP020380|CRISPRCasFinder 135706-135739 34 CP020380.1 1229318-1229351 0 1.0
CP020380_3 3.1|135706|34|CP020380|CRISPRCasFinder 135706-135739 34 CP020380.1 3970001-3970034 0 1.0
CP020380_3 3.1|135706|34|CP020380|CRISPRCasFinder 135706-135739 34 CP020380.1 4105950-4105983 0 1.0
CP020380_5 5.1|151711|34|CP020380|CRISPRCasFinder 151711-151744 34 CP020380.1 146256-146289 0 1.0
CP020380_5 5.1|151711|34|CP020380|CRISPRCasFinder 151711-151744 34 CP020380.1 1229318-1229351 0 1.0
CP020380_5 5.1|151711|34|CP020380|CRISPRCasFinder 151711-151744 34 CP020380.1 3970001-3970034 0 1.0
CP020380_5 5.1|151711|34|CP020380|CRISPRCasFinder 151711-151744 34 CP020380.1 4105950-4105983 0 1.0
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 CP020380.1 315963-315999 0 1.0
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 CP020380.1 1332244-1332280 0 1.0
CP020380_20 20.36|3463041|37|CP020380|CRISPRCasFinder,CRT 3463041-3463077 37 CP020380.1 272933-272969 0 1.0
CP020380_20 20.78|3463041|38|CP020380|PILER-CR 3463041-3463078 38 CP020380.1 272933-272970 0 1.0
CP020380_23 23.2|3831049|35|CP020380|CRISPRCasFinder 3831049-3831083 35 CP020380.1 3112870-3112904 0 1.0
CP020380_11 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946631-1946667 37 CP020380.1 277946-277982 1 0.973
CP020380_11 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946631-1946667 37 CP020380.1 1294692-1294728 1 0.973
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 CP020380.1 287162-287197 1 0.972
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 CP020380.1 287161-287197 1 0.973
CP020380_22 22.1|3771137|18|CP020380|CRT 3771137-3771154 18 CP020380.1 3771083-3771100 1 0.944
CP020380_11 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945976-1946012 37 CP020380.1 1312990-1313026 2 0.946
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 CP020380.1 3909103-3909129 2 0.926

1. spacer 1.1|31941|38|CP020380|CRISPRCasFinder matches to position: 4105958-4105995, mismatch: 0, identity: 1.0

tagcaacagaataaactgaacgcatgtgaagtttgttt	CRISPR spacer
tagcaacagaataaactgaacgcatgtgaagtttgttt	Protospacer
**************************************

2. spacer 2.1|128816|34|CP020380|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 2.1|128816|34|CP020380|CRISPRCasFinder matches to position: 1229318-1229351, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 2.1|128816|34|CP020380|CRISPRCasFinder matches to position: 3970001-3970034, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 2.1|128816|34|CP020380|CRISPRCasFinder matches to position: 4105950-4105983, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

6. spacer 3.1|135706|34|CP020380|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

7. spacer 3.1|135706|34|CP020380|CRISPRCasFinder matches to position: 1229318-1229351, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

8. spacer 3.1|135706|34|CP020380|CRISPRCasFinder matches to position: 3970001-3970034, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

9. spacer 3.1|135706|34|CP020380|CRISPRCasFinder matches to position: 4105950-4105983, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

10. spacer 5.1|151711|34|CP020380|CRISPRCasFinder matches to position: 146256-146289, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

11. spacer 5.1|151711|34|CP020380|CRISPRCasFinder matches to position: 1229318-1229351, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

12. spacer 5.1|151711|34|CP020380|CRISPRCasFinder matches to position: 3970001-3970034, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

13. spacer 5.1|151711|34|CP020380|CRISPRCasFinder matches to position: 4105950-4105983, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

14. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to position: 315963-315999, mismatch: 0, identity: 1.0

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaacaaaaaagctaaaag	Protospacer
*************************************

15. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to position: 1332244-1332280, mismatch: 0, identity: 1.0

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaacaaaaaagctaaaag	Protospacer
*************************************

16. spacer 20.36|3463041|37|CP020380|CRISPRCasFinder,CRT matches to position: 272933-272969, mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaa	Protospacer
*************************************

17. spacer 20.78|3463041|38|CP020380|PILER-CR matches to position: 272933-272970, mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaaa	Protospacer
**************************************

18. spacer 23.2|3831049|35|CP020380|CRISPRCasFinder matches to position: 3112870-3112904, mismatch: 0, identity: 1.0

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagagt	Protospacer
***********************************

19. spacer 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to position: 277946-277982, mismatch: 1, identity: 0.973

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
caagaacattctctataatatgtgtgttcttcaacta	Protospacer
** **********************************

20. spacer 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to position: 1294692-1294728, mismatch: 1, identity: 0.973

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
caagaacattctctataatatgtgtgttcttcaacta	Protospacer
** **********************************

21. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to position: 287162-287197, mismatch: 1, identity: 0.972

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatgtcatctttactt	Protospacer
***********************.************

22. spacer 20.81|3463239|37|CP020380|PILER-CR matches to position: 287161-287197, mismatch: 1, identity: 0.973

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatgtcatctttactta	Protospacer
***********************.*************

23. spacer 22.1|3771137|18|CP020380|CRT matches to position: 3771083-3771100, mismatch: 1, identity: 0.944

ccggttgctcctgtattt	CRISPR spacer
cctgttgctcctgtattt	Protospacer
** ***************

24. spacer 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to position: 1312990-1313026, mismatch: 2, identity: 0.946

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgctggcgagaagcgttgatgaaatga	Protospacer
************.****.*******************

25. spacer 22.2|3771182|27|CP020380|CRT matches to position: 3909103-3909129, mismatch: 2, identity: 0.926

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccagttgcccctgttgctcctgtattc	Protospacer
**.******** ***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP020380_4 4.1|144242|29|CP020380|CRISPRCasFinder 144242-144270 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
CP020380_10 10.5|1769666|38|CP020380|CRISPRCasFinder 1769666-1769703 38 NC_028838 Clostridium phage phiCD506, complete genome 24132-24169 0 1.0
CP020380_10 10.5|1769666|38|CP020380|CRISPRCasFinder 1769666-1769703 38 NC_028958 Clostridium phage phiCD146, complete genome 29963-30000 0 1.0
CP020380_10 10.5|1769666|38|CP020380|CRISPRCasFinder 1769666-1769703 38 MK473382 Clostridium phage JD032, complete genome 10118-10155 0 1.0
CP020380_11 11.2|1945710|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945710-1945746 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 30461-30497 0 1.0
CP020380_11 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945910-1945946 37 KU057941 Clostridium phage CDSH1, complete genome 25566-25602 0 1.0
CP020380_11 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945910-1945946 37 LN881738 Escherichia phage slur17, complete genome 36454-36490 0 1.0
CP020380_11 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945910-1945946 37 NC_028905 Clostridium phage phiCD111, complete genome 25340-25376 0 1.0
CP020380_11 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945910-1945946 37 HM568888 Clostridium phage phiCD38-2, complete genome 25062-25098 0 1.0
CP020380_11 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945910-1945946 37 NC_028958 Clostridium phage phiCD146, complete genome 24624-24660 0 1.0
CP020380_11 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945976-1946012 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 9170-9206 0 1.0
CP020380_11 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945976-1946012 37 NC_007917 Clostridium phage phi CD119, complete genome 9170-9206 0 1.0
CP020380_11 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1945976-1946012 37 NC_028996 Clostridium phage phiCDHM19, complete genome 9416-9452 0 1.0
CP020380_11 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946172-1946208 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 70805-70841 0 1.0
CP020380_11 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946172-1946208 37 MF547662 Clostridioides phage LIBA6276, complete genome 20970-21006 0 1.0
CP020380_11 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946172-1946208 37 MF547663 Clostridioides phage LIBA2945, complete genome 20970-21006 0 1.0
CP020380_11 11.14|1946501|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946501-1946537 37 LN681539 Clostridium phage phiCD505, complete genome 31425-31461 0 1.0
CP020380_11 11.15|1946567|35|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946567-1946601 35 NC_048642 Clostridium phage CDKM9, complete genome 26225-26259 0 1.0
CP020380_11 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946631-1946667 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 41448-41484 0 1.0
CP020380_11 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946631-1946667 37 NC_007917 Clostridium phage phi CD119, complete genome 41448-41484 0 1.0
CP020380_11 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946631-1946667 37 HG531805 Clostridium phage CDMH1 complete genome 44300-44336 0 1.0
CP020380_20 20.7|3461134|35|CP020380|CRISPRCasFinder,CRT 3461134-3461168 35 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 29555-29589 0 1.0
CP020380_20 20.14|3461591|37|CP020380|CRISPRCasFinder,CRT 3461591-3461627 37 GU949551 Clostridium phage phiCD6356, complete genome 26723-26759 0 1.0
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 NC_028905 Clostridium phage phiCD111, complete genome 19748-19784 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 NC_048665 Clostridium phage phiCDHM14, complete genome 22701-22737 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 KU057941 Clostridium phage CDSH1, complete genome 29097-29133 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 NC_028905 Clostridium phage phiCD111, complete genome 28871-28907 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 NC_028838 Clostridium phage phiCD506, complete genome 22522-22558 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 HG796225 Clostridium phage phiCDHM13 complete genome 22201-22237 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 NC_028958 Clostridium phage phiCD146, complete genome 28155-28191 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 LN681538 Clostridium phage phiCD481-1, complete genome 21941-21977 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 HG798901 Clostridium phage phiCDHM11 complete genome 22201-22237 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 MK473382 Clostridium phage JD032, complete genome 11728-11764 0 1.0
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 LN881738 Escherichia phage slur17, complete genome 32923-32959 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 KU057941 Clostridium phage CDSH1, complete genome 29728-29764 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 NC_028905 Clostridium phage phiCD111, complete genome 29524-29560 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 NC_028838 Clostridium phage phiCD506, complete genome 23150-23186 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 HM568888 Clostridium phage phiCD38-2, complete genome 29222-29258 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 NC_028958 Clostridium phage phiCD146, complete genome 28786-28822 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 MK473382 Clostridium phage JD032, complete genome 11099-11135 0 1.0
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 LN881738 Escherichia phage slur17, complete genome 32292-32328 0 1.0
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 KU057941 Clostridium phage CDSH1, complete genome 30531-30567 0 1.0
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 LN881738 Escherichia phage slur17, complete genome 31489-31525 0 1.0
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 HM568888 Clostridium phage phiCD38-2, complete genome 30023-30059 0 1.0
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NC_028958 Clostridium phage phiCD146, complete genome 29784-29820 0 1.0
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 JX145342 Clostridium phage phiMMP04, complete genome 9281-9318 0 1.0
CP020380_20 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT 3462645-3462681 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 10806-10842 0 1.0
CP020380_20 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT 3462645-3462681 37 NC_007917 Clostridium phage phi CD119, complete genome 10806-10842 0 1.0
CP020380_20 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT 3462645-3462681 37 NC_028996 Clostridium phage phiCDHM19, complete genome 11052-11088 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 28937-28973 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 NC_007917 Clostridium phage phi CD119, complete genome 28937-28973 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 LN681539 Clostridium phage phiCD505, complete genome 30973-31009 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 NC_028996 Clostridium phage phiCDHM19, complete genome 32965-33001 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 LN681542 Clostridium phage phiMMP03, complete genome 29952-29988 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 HG531805 Clostridium phage CDMH1 complete genome 29324-29360 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 NC_009231 Clostridium phage phiC2, complete genome 33485-33521 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 JX145341 Clostridium phage phiMMP02, complete genome 30207-30243 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 NC_011398 Clostridium phage phiCD27, complete genome 32744-32780 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 NC_048642 Clostridium phage CDKM9, complete genome 31432-31468 0 1.0
CP020380_20 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT 3462711-3462747 37 KX228400 Clostridium phage CDKM15, complete genome 32353-32389 0 1.0
CP020380_20 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT 3462843-3462878 36 LN881738 Escherichia phage slur17, complete genome 975-1010 0 1.0
CP020380_20 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT 3462843-3462878 36 KU057941 Clostridium phage CDSH1, complete genome 19427-19462 0 1.0
CP020380_20 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT 3462843-3462878 36 HM568888 Clostridium phage phiCD38-2, complete genome 18923-18958 0 1.0
CP020380_20 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT 3462843-3462878 36 NC_028958 Clostridium phage phiCD146, complete genome 18932-18967 0 1.0
CP020380_20 20.36|3463041|37|CP020380|CRISPRCasFinder,CRT 3463041-3463077 37 JX145341 Clostridium phage phiMMP02, complete genome 37071-37107 0 1.0
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 LN681542 Clostridium phage phiMMP03, complete genome 693-728 0 1.0
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 HG531805 Clostridium phage CDMH1 complete genome 606-641 0 1.0
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 NC_009231 Clostridium phage phiC2, complete genome 724-759 0 1.0
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 NC_009231 Clostridium phage phiC2, complete genome 56492-56527 0 1.0
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 LN681541 Clostridium phage phiMMP01, complete genome 693-728 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 KU057941 Clostridium phage CDSH1, complete genome 29727-29764 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 NC_028905 Clostridium phage phiCD111, complete genome 29523-29560 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 NC_028838 Clostridium phage phiCD506, complete genome 23149-23186 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 HM568888 Clostridium phage phiCD38-2, complete genome 29221-29258 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 NC_028958 Clostridium phage phiCD146, complete genome 28785-28822 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 MK473382 Clostridium phage JD032, complete genome 11099-11136 0 1.0
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 LN881738 Escherichia phage slur17, complete genome 32292-32329 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 28937-28974 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 NC_007917 Clostridium phage phi CD119, complete genome 28937-28974 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 LN681539 Clostridium phage phiCD505, complete genome 30973-31010 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 NC_028996 Clostridium phage phiCDHM19, complete genome 32965-33002 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 LN681542 Clostridium phage phiMMP03, complete genome 29952-29989 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 HG531805 Clostridium phage CDMH1 complete genome 29324-29361 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 NC_009231 Clostridium phage phiC2, complete genome 33485-33522 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 JX145341 Clostridium phage phiMMP02, complete genome 30207-30244 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 NC_011398 Clostridium phage phiCD27, complete genome 32744-32781 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 NC_048642 Clostridium phage CDKM9, complete genome 31432-31469 0 1.0
CP020380_20 20.73|3462711|38|CP020380|PILER-CR 3462711-3462748 38 KX228400 Clostridium phage CDKM15, complete genome 32353-32390 0 1.0
CP020380_20 20.78|3463041|38|CP020380|PILER-CR 3463041-3463078 38 JX145341 Clostridium phage phiMMP02, complete genome 37071-37108 0 1.0
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 LN681542 Clostridium phage phiMMP03, complete genome 692-728 0 1.0
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 HG531805 Clostridium phage CDMH1 complete genome 605-641 0 1.0
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 NC_009231 Clostridium phage phiC2, complete genome 723-759 0 1.0
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 NC_009231 Clostridium phage phiC2, complete genome 56491-56527 0 1.0
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 LN681541 Clostridium phage phiMMP01, complete genome 692-728 0 1.0
CP020380_23 23.6|3831337|35|CP020380|CRISPRCasFinder 3831337-3831371 35 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 37117-37151 0 1.0
CP020380_23 23.6|3831337|35|CP020380|CRISPRCasFinder 3831337-3831371 35 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 35851-35885 0 1.0
CP020380_23 23.6|3831337|35|CP020380|CRISPRCasFinder 3831337-3831371 35 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 32439-32473 0 1.0
CP020380_23 23.6|3831337|35|CP020380|CRISPRCasFinder 3831337-3831371 35 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 8675-8709 0 1.0
CP020380_23 23.6|3831337|35|CP020380|CRISPRCasFinder 3831337-3831371 35 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 2719-2753 0 1.0
CP020380_2 2.1|128816|34|CP020380|CRISPRCasFinder 128816-128849 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP020380_3 3.1|135706|34|CP020380|CRISPRCasFinder 135706-135739 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP020380_5 5.1|151711|34|CP020380|CRISPRCasFinder 151711-151744 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP020380_9 9.1|1661727|38|CP020380|CRISPRCasFinder 1661727-1661764 38 GU949551 Clostridium phage phiCD6356, complete genome 127-164 1 0.974
CP020380_10 10.1|1769665|39|CP020380|PILER-CR,CRT 1769665-1769703 39 MK473382 Clostridium phage JD032, complete genome 10118-10156 1 0.974
CP020380_10 10.1|1769665|39|CP020380|PILER-CR,CRT 1769665-1769703 39 NC_028838 Clostridium phage phiCD506, complete genome 24131-24169 1 0.974
CP020380_10 10.1|1769665|39|CP020380|PILER-CR,CRT 1769665-1769703 39 NC_028958 Clostridium phage phiCD146, complete genome 29962-30000 1 0.974
CP020380_10 10.2|1769732|38|CP020380|PILER-CR,CRT 1769732-1769769 38 GU949551 Clostridium phage phiCD6356, complete genome 36663-36700 1 0.974
CP020380_10 10.6|1769733|37|CP020380|CRISPRCasFinder 1769733-1769769 37 GU949551 Clostridium phage phiCD6356, complete genome 36664-36700 1 0.973
CP020380_11 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946042-1946077 36 MF547662 Clostridioides phage LIBA6276, complete genome 11889-11924 1 0.972
CP020380_11 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946042-1946077 36 MF547663 Clostridioides phage LIBA2945, complete genome 11889-11924 1 0.972
CP020380_11 11.8|1946107|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946107-1946142 36 MF547662 Clostridioides phage LIBA6276, complete genome 103999-104034 1 0.972
CP020380_11 11.8|1946107|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946107-1946142 36 MF547663 Clostridioides phage LIBA2945, complete genome 102539-102574 1 0.972
CP020380_11 11.12|1946370|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946370-1946406 37 MF547662 Clostridioides phage LIBA6276, complete genome 3466-3502 1 0.973
CP020380_11 11.12|1946370|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946370-1946406 37 MF547663 Clostridioides phage LIBA2945, complete genome 3466-3502 1 0.973
CP020380_13 13.1|2895037|36|CP020380|PILER-CR,CRT 2895037-2895072 36 GU949551 Clostridium phage phiCD6356, complete genome 12396-12431 1 0.972
CP020380_13 13.4|2895038|35|CP020380|CRISPRCasFinder 2895038-2895072 35 GU949551 Clostridium phage phiCD6356, complete genome 12397-12431 1 0.971
CP020380_14 14.4|3108298|38|CP020380|CRISPRCasFinder,CRT,PILER-CR 3108298-3108335 38 LN681539 Clostridium phage phiCD505, complete genome 14366-14403 1 0.974
CP020380_14 14.4|3108298|38|CP020380|CRISPRCasFinder,CRT,PILER-CR 3108298-3108335 38 NC_048642 Clostridium phage CDKM9, complete genome 14304-14341 1 0.974
CP020380_20 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT 3461265-3461300 36 NC_028905 Clostridium phage phiCD111, complete genome 22095-22130 1 0.972
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 KU057941 Clostridium phage CDSH1, complete genome 19780-19816 1 0.973
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 HM568888 Clostridium phage phiCD38-2, complete genome 19276-19312 1 0.973
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 NC_028958 Clostridium phage phiCD146, complete genome 19285-19321 1 0.973
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 LN881738 Escherichia phage slur17, complete genome 621-657 1 0.973
CP020380_20 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT 3461985-3462021 37 HM568888 Clostridium phage phiCD38-2, complete genome 28593-28629 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NC_048665 Clostridium phage phiCDHM14, complete genome 23380-23416 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 MK473382 Clostridium phage JD032, complete genome 10298-10334 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NC_028838 Clostridium phage phiCD506, complete genome 23953-23989 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 HG796225 Clostridium phage phiCDHM13 complete genome 22881-22917 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 LN681538 Clostridium phage phiCD481-1, complete genome 22620-22656 1 0.973
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 HG798901 Clostridium phage phiCDHM11 complete genome 22880-22916 1 0.973
CP020380_20 20.28|3462512|37|CP020380|CRISPRCasFinder,CRT 3462512-3462548 37 NC_028905 Clostridium phage phiCD111, complete genome 4750-4786 1 0.973
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 NC_048665 Clostridium phage phiCDHM14, complete genome 20206-20242 1 0.973
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 HG796225 Clostridium phage phiCDHM13 complete genome 19706-19742 1 0.973
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 HG798901 Clostridium phage phiCDHM11 complete genome 19705-19741 1 0.973
CP020380_20 20.49|3461134|36|CP020380|PILER-CR 3461134-3461169 36 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 29555-29590 1 0.972
CP020380_20 20.56|3461591|38|CP020380|PILER-CR 3461591-3461628 38 GU949551 Clostridium phage phiCD6356, complete genome 26722-26759 1 0.974
CP020380_20 20.61|3461919|38|CP020380|PILER-CR 3461919-3461956 38 NC_028905 Clostridium phage phiCD111, complete genome 19748-19785 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 MK473382 Clostridium phage JD032, complete genome 11727-11764 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 LN881738 Escherichia phage slur17, complete genome 32922-32959 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 NC_048665 Clostridium phage phiCDHM14, complete genome 22701-22738 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 KU057941 Clostridium phage CDSH1, complete genome 29097-29134 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 NC_028905 Clostridium phage phiCD111, complete genome 28871-28908 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 NC_028838 Clostridium phage phiCD506, complete genome 22522-22559 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 HG796225 Clostridium phage phiCDHM13 complete genome 22201-22238 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 NC_028958 Clostridium phage phiCD146, complete genome 28155-28192 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 LN681538 Clostridium phage phiCD481-1, complete genome 21941-21978 1 0.974
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 HG798901 Clostridium phage phiCDHM11 complete genome 22201-22238 1 0.974
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 LN881738 Escherichia phage slur17, complete genome 31489-31526 1 0.974
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 KU057941 Clostridium phage CDSH1, complete genome 30530-30567 1 0.974
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 HM568888 Clostridium phage phiCD38-2, complete genome 30022-30059 1 0.974
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NC_028958 Clostridium phage phiCD146, complete genome 29783-29820 1 0.974
CP020380_20 20.70|3462512|38|CP020380|PILER-CR 3462512-3462549 38 NC_028905 Clostridium phage phiCD111, complete genome 4749-4786 1 0.974
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 JX145342 Clostridium phage phiMMP04, complete genome 9280-9318 1 0.974
CP020380_20 20.72|3462645|38|CP020380|PILER-CR 3462645-3462682 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 10806-10843 1 0.974
CP020380_20 20.72|3462645|38|CP020380|PILER-CR 3462645-3462682 38 NC_007917 Clostridium phage phi CD119, complete genome 10806-10843 1 0.974
CP020380_20 20.72|3462645|38|CP020380|PILER-CR 3462645-3462682 38 NC_028996 Clostridium phage phiCDHM19, complete genome 11052-11089 1 0.974
CP020380_20 20.75|3462843|37|CP020380|PILER-CR 3462843-3462879 37 KU057941 Clostridium phage CDSH1, complete genome 19426-19462 1 0.973
CP020380_20 20.75|3462843|37|CP020380|PILER-CR 3462843-3462879 37 HM568888 Clostridium phage phiCD38-2, complete genome 18922-18958 1 0.973
CP020380_20 20.75|3462843|37|CP020380|PILER-CR 3462843-3462879 37 NC_028958 Clostridium phage phiCD146, complete genome 18931-18967 1 0.973
CP020380_20 20.75|3462843|37|CP020380|PILER-CR 3462843-3462879 37 LN881738 Escherichia phage slur17, complete genome 975-1011 1 0.973
CP020380_23 23.2|3831049|35|CP020380|CRISPRCasFinder 3831049-3831083 35 NC_011398 Clostridium phage phiCD27, complete genome 15173-15207 1 0.971
CP020380_23 23.2|3831049|35|CP020380|CRISPRCasFinder 3831049-3831083 35 KX228400 Clostridium phage CDKM15, complete genome 15316-15350 1 0.971
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 LN681539 Clostridium phage phiCD505, complete genome 43253-43291 1 0.974
CP020380_23 23.15|3831336|38|CP020380|CRT 3831336-3831373 38 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 8673-8710 1 0.974
CP020380_23 23.15|3831336|38|CP020380|CRT 3831336-3831373 38 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 2717-2754 1 0.974
CP020380_23 23.15|3831336|38|CP020380|CRT 3831336-3831373 38 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 37116-37153 1 0.974
CP020380_23 23.15|3831336|38|CP020380|CRT 3831336-3831373 38 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 35850-35887 1 0.974
CP020380_23 23.15|3831336|38|CP020380|CRT 3831336-3831373 38 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 32438-32475 1 0.974
CP020380_1 1.1|31941|38|CP020380|CRISPRCasFinder 31941-31978 38 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3094-3131 2 0.947
CP020380_11 11.15|1946567|35|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946567-1946601 35 MK473382 Clostridium phage JD032, complete genome 15887-15921 2 0.943
CP020380_13 13.2|2895102|37|CP020380|PILER-CR,CRT 2895102-2895138 37 JX145342 Clostridium phage phiMMP04, complete genome 20116-20152 2 0.946
CP020380_13 13.3|2895168|38|CP020380|PILER-CR,CRT 2895168-2895205 38 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 29664-29701 2 0.947
CP020380_13 13.3|2895168|38|CP020380|PILER-CR,CRT 2895168-2895205 38 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 28308-28345 2 0.947
CP020380_13 13.3|2895168|38|CP020380|PILER-CR,CRT 2895168-2895205 38 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 24986-25023 2 0.947
CP020380_13 13.5|2895103|36|CP020380|CRISPRCasFinder 2895103-2895138 36 JX145342 Clostridium phage phiMMP04, complete genome 20116-20151 2 0.944
CP020380_13 13.6|2895169|37|CP020380|CRISPRCasFinder 2895169-2895205 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 29665-29701 2 0.946
CP020380_13 13.6|2895169|37|CP020380|CRISPRCasFinder 2895169-2895205 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 28309-28345 2 0.946
CP020380_13 13.6|2895169|37|CP020380|CRISPRCasFinder 2895169-2895205 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 24987-25023 2 0.946
CP020380_20 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT 3461265-3461300 36 KU057941 Clostridium phage CDSH1, complete genome 22355-22390 2 0.944
CP020380_20 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT 3461265-3461300 36 HM568888 Clostridium phage phiCD38-2, complete genome 21851-21886 2 0.944
CP020380_20 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT 3461265-3461300 36 NC_028958 Clostridium phage phiCD146, complete genome 21413-21448 2 0.944
CP020380_20 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT 3461265-3461300 36 LN881738 Escherichia phage slur17, complete genome 39666-39701 2 0.944
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 MF547662 Clostridioides phage LIBA6276, complete genome 115468-115500 2 0.939
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 KU057941 Clostridium phage CDSH1, complete genome 27134-27166 2 0.939
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 LN881738 Escherichia phage slur17, complete genome 34890-34922 2 0.939
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 NC_028905 Clostridium phage phiCD111, complete genome 26908-26940 2 0.939
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 HM568888 Clostridium phage phiCD38-2, complete genome 26630-26662 2 0.939
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 NC_028958 Clostridium phage phiCD146, complete genome 26192-26224 2 0.939
CP020380_20 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT 3461392-3461429 38 KU057941 Clostridium phage CDSH1, complete genome 26968-27005 2 0.947
CP020380_20 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT 3461392-3461429 38 LN881738 Escherichia phage slur17, complete genome 35051-35088 2 0.947
CP020380_20 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT 3461392-3461429 38 NC_028905 Clostridium phage phiCD111, complete genome 26742-26779 2 0.947
CP020380_20 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT 3461392-3461429 38 HM568888 Clostridium phage phiCD38-2, complete genome 26464-26501 2 0.947
CP020380_20 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT 3461392-3461429 38 NC_028958 Clostridium phage phiCD146, complete genome 26026-26063 2 0.947
CP020380_20 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT 3461459-3461495 37 LN681542 Clostridium phage phiMMP03, complete genome 2419-2455 2 0.946
CP020380_20 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT 3461459-3461495 37 HG531805 Clostridium phage CDMH1 complete genome 2332-2368 2 0.946
CP020380_20 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT 3461459-3461495 37 NC_009231 Clostridium phage phiC2, complete genome 2450-2486 2 0.946
CP020380_20 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT 3461459-3461495 37 LN681541 Clostridium phage phiMMP01, complete genome 2419-2455 2 0.946
CP020380_20 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT 3461459-3461495 37 AY522340 Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds 89-125 2 0.946
CP020380_20 20.24|3462249|37|CP020380|CRISPRCasFinder,CRT 3462249-3462285 37 LN681534 Clostridium phage phiCD24-1, complete genome 24273-24309 2 0.946
CP020380_20 20.24|3462249|37|CP020380|CRISPRCasFinder,CRT 3462249-3462285 37 MN718463 Clostridium phage phiCDKH01, complete genome 44007-44043 2 0.946
CP020380_20 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT 3462843-3462878 36 NC_028905 Clostridium phage phiCD111, complete genome 19397-19432 2 0.944
CP020380_20 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT 3462975-3463011 37 MK473382 Clostridium phage JD032, complete genome 14177-14213 2 0.946
CP020380_20 20.51|3461265|37|CP020380|PILER-CR 3461265-3461301 37 NC_028905 Clostridium phage phiCD111, complete genome 22094-22130 2 0.946
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 MF547662 Clostridioides phage LIBA6276, complete genome 115467-115500 2 0.941
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 KU057941 Clostridium phage CDSH1, complete genome 27134-27167 2 0.941
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 LN881738 Escherichia phage slur17, complete genome 34889-34922 2 0.941
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 NC_028905 Clostridium phage phiCD111, complete genome 26908-26941 2 0.941
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 HM568888 Clostridium phage phiCD38-2, complete genome 26630-26663 2 0.941
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 NC_028958 Clostridium phage phiCD146, complete genome 26192-26225 2 0.941
CP020380_20 20.61|3461919|38|CP020380|PILER-CR 3461919-3461956 38 KU057941 Clostridium phage CDSH1, complete genome 19780-19817 2 0.947
CP020380_20 20.61|3461919|38|CP020380|PILER-CR 3461919-3461956 38 HM568888 Clostridium phage phiCD38-2, complete genome 19276-19313 2 0.947
CP020380_20 20.61|3461919|38|CP020380|PILER-CR 3461919-3461956 38 NC_028958 Clostridium phage phiCD146, complete genome 19285-19322 2 0.947
CP020380_20 20.61|3461919|38|CP020380|PILER-CR 3461919-3461956 38 LN881738 Escherichia phage slur17, complete genome 620-657 2 0.947
CP020380_20 20.62|3461985|38|CP020380|PILER-CR 3461985-3462022 38 HM568888 Clostridium phage phiCD38-2, complete genome 28593-28630 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 MK473382 Clostridium phage JD032, complete genome 10298-10335 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NC_048665 Clostridium phage phiCDHM14, complete genome 23379-23416 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NC_028838 Clostridium phage phiCD506, complete genome 23952-23989 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 HG796225 Clostridium phage phiCDHM13 complete genome 22880-22917 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 LN681538 Clostridium phage phiCD481-1, complete genome 22619-22656 2 0.947
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 HG798901 Clostridium phage phiCDHM11 complete genome 22879-22916 2 0.947
CP020380_20 20.77|3462975|38|CP020380|PILER-CR 3462975-3463012 38 NC_048665 Clostridium phage phiCDHM14, complete genome 20206-20243 2 0.947
CP020380_20 20.77|3462975|38|CP020380|PILER-CR 3462975-3463012 38 HG796225 Clostridium phage phiCDHM13 complete genome 19706-19743 2 0.947
CP020380_20 20.77|3462975|38|CP020380|PILER-CR 3462975-3463012 38 HG798901 Clostridium phage phiCDHM11 complete genome 19705-19742 2 0.947
CP020380_23 23.2|3831049|35|CP020380|CRISPRCasFinder 3831049-3831083 35 LN681539 Clostridium phage phiCD505, complete genome 15224-15258 2 0.943
CP020380_23 23.2|3831049|35|CP020380|CRISPRCasFinder 3831049-3831083 35 NC_048642 Clostridium phage CDKM9, complete genome 15162-15196 2 0.943
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 LN681539 Clostridium phage phiCD505, complete genome 42100-42138 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 43071-43109 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_007917 Clostridium phage phi CD119, complete genome 43071-43109 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 LN681542 Clostridium phage phiMMP03, complete genome 45042-45080 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_009231 Clostridium phage phiC2, complete genome 48580-48618 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 JX145341 Clostridium phage phiMMP02, complete genome 42167-42205 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 JX145341 Clostridium phage phiMMP02, complete genome 43320-43358 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_048642 Clostridium phage CDKM9, complete genome 44255-44293 2 0.949
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 KX228400 Clostridium phage CDKM15, complete genome 45564-45602 2 0.949
CP020380_23 23.19|3831049|37|CP020380|PILER-CR 3831049-3831085 37 NC_011398 Clostridium phage phiCD27, complete genome 15173-15209 2 0.946
CP020380_23 23.19|3831049|37|CP020380|PILER-CR 3831049-3831085 37 KX228400 Clostridium phage CDKM15, complete genome 15316-15352 2 0.946
CP020380_6 6.2|300505|37|CP020380|CRISPRCasFinder 300505-300541 37 NC_011398 Clostridium phage phiCD27, complete genome 47184-47220 3 0.919
CP020380_6 6.5|300506|36|CP020380|CRT 300506-300541 36 NC_011398 Clostridium phage phiCD27, complete genome 47184-47219 3 0.917
CP020380_11 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946042-1946077 36 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 64994-65029 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 42195-42230 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 NC_007917 Clostridium phage phi CD119, complete genome 42195-42230 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 LN681539 Clostridium phage phiCD505, complete genome 42378-42413 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 NC_028996 Clostridium phage phiCDHM19, complete genome 45208-45243 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 LN681542 Clostridium phage phiMMP03, complete genome 44167-44202 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 HG531805 Clostridium phage CDMH1 complete genome 45530-45565 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 NC_009231 Clostridium phage phiC2, complete genome 47704-47739 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 JX145341 Clostridium phage phiMMP02, complete genome 42445-42480 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 NC_011398 Clostridium phage phiCD27, complete genome 43256-43291 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 NC_048642 Clostridium phage CDKM9, complete genome 44533-44568 3 0.917
CP020380_11 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946436-1946471 36 KX228400 Clostridium phage CDKM15, complete genome 44689-44724 3 0.917
CP020380_13 13.6|2895169|37|CP020380|CRISPRCasFinder 2895169-2895205 37 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 17076-17112 3 0.919
CP020380_13 13.6|2895169|37|CP020380|CRISPRCasFinder 2895169-2895205 37 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 11120-11156 3 0.919
CP020380_20 20.51|3461265|37|CP020380|PILER-CR 3461265-3461301 37 LN881738 Escherichia phage slur17, complete genome 39666-39702 3 0.919
CP020380_20 20.51|3461265|37|CP020380|PILER-CR 3461265-3461301 37 KU057941 Clostridium phage CDSH1, complete genome 22354-22390 3 0.919
CP020380_20 20.51|3461265|37|CP020380|PILER-CR 3461265-3461301 37 HM568888 Clostridium phage phiCD38-2, complete genome 21850-21886 3 0.919
CP020380_20 20.51|3461265|37|CP020380|PILER-CR 3461265-3461301 37 NC_028958 Clostridium phage phiCD146, complete genome 21412-21448 3 0.919
CP020380_20 20.53|3461392|39|CP020380|PILER-CR 3461392-3461430 39 LN881738 Escherichia phage slur17, complete genome 35050-35088 3 0.923
CP020380_20 20.53|3461392|39|CP020380|PILER-CR 3461392-3461430 39 KU057941 Clostridium phage CDSH1, complete genome 26968-27006 3 0.923
CP020380_20 20.53|3461392|39|CP020380|PILER-CR 3461392-3461430 39 NC_028905 Clostridium phage phiCD111, complete genome 26742-26780 3 0.923
CP020380_20 20.53|3461392|39|CP020380|PILER-CR 3461392-3461430 39 HM568888 Clostridium phage phiCD38-2, complete genome 26464-26502 3 0.923
CP020380_20 20.53|3461392|39|CP020380|PILER-CR 3461392-3461430 39 NC_028958 Clostridium phage phiCD146, complete genome 26026-26064 3 0.923
CP020380_20 20.54|3461459|38|CP020380|PILER-CR 3461459-3461496 38 LN681542 Clostridium phage phiMMP03, complete genome 2418-2455 3 0.921
CP020380_20 20.54|3461459|38|CP020380|PILER-CR 3461459-3461496 38 HG531805 Clostridium phage CDMH1 complete genome 2331-2368 3 0.921
CP020380_20 20.54|3461459|38|CP020380|PILER-CR 3461459-3461496 38 NC_009231 Clostridium phage phiC2, complete genome 2449-2486 3 0.921
CP020380_20 20.54|3461459|38|CP020380|PILER-CR 3461459-3461496 38 LN681541 Clostridium phage phiMMP01, complete genome 2418-2455 3 0.921
CP020380_20 20.54|3461459|38|CP020380|PILER-CR 3461459-3461496 38 AY522340 Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds 88-125 3 0.921
CP020380_20 20.66|3462249|38|CP020380|PILER-CR 3462249-3462286 38 LN681534 Clostridium phage phiCD24-1, complete genome 24272-24309 3 0.921
CP020380_20 20.66|3462249|38|CP020380|PILER-CR 3462249-3462286 38 MN718463 Clostridium phage phiCDKH01, complete genome 44006-44043 3 0.921
CP020380_20 20.75|3462843|37|CP020380|PILER-CR 3462843-3462879 37 NC_028905 Clostridium phage phiCD111, complete genome 19396-19432 3 0.919
CP020380_20 20.77|3462975|38|CP020380|PILER-CR 3462975-3463012 38 MK473382 Clostridium phage JD032, complete genome 14176-14213 3 0.921
CP020380_23 23.11|3831048|38|CP020380|CRT 3831048-3831085 38 NC_011398 Clostridium phage phiCD27, complete genome 15172-15209 3 0.921
CP020380_23 23.11|3831048|38|CP020380|CRT 3831048-3831085 38 KX228400 Clostridium phage CDKM15, complete genome 15315-15352 3 0.921
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_048642 Clostridium phage CDKM9, complete genome 45409-45447 3 0.923
CP020380_23 23.19|3831049|37|CP020380|PILER-CR 3831049-3831085 37 LN681539 Clostridium phage phiCD505, complete genome 15224-15260 3 0.919
CP020380_23 23.19|3831049|37|CP020380|PILER-CR 3831049-3831085 37 NC_048642 Clostridium phage CDKM9, complete genome 15162-15198 3 0.919
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 MN694423 Marine virus AFVG_250M1001, complete genome 26200-26226 4 0.852
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 251910-251936 4 0.852
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 MN693514 Marine virus AFVG_25M225, complete genome 17808-17834 4 0.852
CP020380_23 23.11|3831048|38|CP020380|CRT 3831048-3831085 38 LN681539 Clostridium phage phiCD505, complete genome 15223-15260 4 0.895
CP020380_23 23.11|3831048|38|CP020380|CRT 3831048-3831085 38 NC_048642 Clostridium phage CDKM9, complete genome 15161-15198 4 0.895
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 HG531805 Clostridium phage CDMH1 complete genome 45252-45290 4 0.897
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 GU949551 Clostridium phage phiCD6356, complete genome 24929-24965 5 0.865
CP020380_20 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT 3462117-3462153 37 JX145342 Clostridium phage phiMMP04, complete genome 20795-20831 5 0.865
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NC_028905 Clostridium phage phiCD111, complete genome 30326-30362 5 0.865
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 NC_048665 Clostridium phage phiCDHM14, complete genome 9295-9332 5 0.868
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 MK473382 Clostridium phage JD032, complete genome 25380-25417 5 0.868
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 NC_028838 Clostridium phage phiCD506, complete genome 9721-9758 5 0.868
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 HG796225 Clostridium phage phiCDHM13 complete genome 9263-9300 5 0.868
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 LN681538 Clostridium phage phiCD481-1, complete genome 9748-9785 5 0.868
CP020380_20 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT 3462578-3462615 38 HG798901 Clostridium phage phiCDHM11 complete genome 9262-9299 5 0.868
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 GU949551 Clostridium phage phiCD6356, complete genome 24928-24965 5 0.868
CP020380_20 20.64|3462117|38|CP020380|PILER-CR 3462117-3462154 38 JX145342 Clostridium phage phiMMP04, complete genome 20794-20831 5 0.868
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 173197-173223 5 0.815
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 173305-173331 5 0.815
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 251982-252008 5 0.815
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 252000-252026 5 0.815
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 LN681542 Clostridium phage phiMMP03, complete genome 43889-43927 5 0.872
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_009231 Clostridium phage phiC2, complete genome 47426-47464 5 0.872
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 KX228400 Clostridium phage CDKM15, complete genome 44411-44449 5 0.872
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_028996 Clostridium phage phiCDHM19, complete genome 44930-44968 5 0.872
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_011398 Clostridium phage phiCD27, complete genome 42978-43016 5 0.872
CP020380_4 4.1|144242|29|CP020380|CRISPRCasFinder 144242-144270 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NC_028905 Clostridium phage phiCD111, complete genome 30325-30362 6 0.842
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 NC_048665 Clostridium phage phiCDHM14, complete genome 9294-9332 6 0.846
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 NC_028838 Clostridium phage phiCD506, complete genome 9720-9758 6 0.846
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 HG796225 Clostridium phage phiCDHM13 complete genome 9262-9300 6 0.846
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 LN681538 Clostridium phage phiCD481-1, complete genome 9747-9785 6 0.846
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 HG798901 Clostridium phage phiCDHM11 complete genome 9261-9299 6 0.846
CP020380_20 20.71|3462578|39|CP020380|PILER-CR 3462578-3462616 39 MK473382 Clostridium phage JD032, complete genome 25380-25418 6 0.846
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1500640-1500666 6 0.778
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 236002-236028 6 0.778
CP020380_22 22.2|3771182|27|CP020380|CRT 3771182-3771208 27 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 71554-71580 6 0.778
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 41918-41956 7 0.821
CP020380_23 23.14|3831270|39|CP020380|CRT 3831270-3831308 39 NC_007917 Clostridium phage phi CD119, complete genome 41918-41956 7 0.821
CP020380_10 10.7|1769799|36|CP020380|CRISPRCasFinder 1769799-1769834 36 MK448930 Streptococcus phage Javan406, complete genome 17755-17790 8 0.778
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP031904 Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence 2094-2130 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_018654 Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence 35072-35108 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP023530 Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence 25016-25052 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP041001 Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence 6438-6474 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 CP025574 Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence 63983-64019 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP023533 Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence 42889-42925 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 CP049615 Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence 27821-27857 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP027392 Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence 23042-23078 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP023062 Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence 66286-66322 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP023552 Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence 58470-58506 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_KY706108 Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence 80876-80912 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_011752 Escherichia coli 55989 plasmid 55989p, complete sequence 38858-38894 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 CP042952 Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence 56360-56396 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP026724 Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence 88485-88521 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 CP051693 Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence 19506-19542 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_019000 Escherichia coli plasmid pHUSEC41-2, complete sequence 39942-39978 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP009053 Escherichia coli NCCP15648 plasmid p15648-3, complete sequence 44488-44524 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_018666 Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence 67772-67808 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_018662 Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence 40019-40055 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP013186 Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence 28785-28821 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NZ_CP022087 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence 21507-21543 8 0.784
CP020380_14 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT 3108167-3108203 37 NC_022743 Escherichia coli plasmid pHUSEC2011-2, complete sequence 35437-35473 8 0.784
CP020380_10 10.3|1769798|37|CP020380|PILER-CR,CRT 1769798-1769834 37 MK448930 Streptococcus phage Javan406, complete genome 17754-17790 9 0.757
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 21108-21144 9 0.757
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 19753-19789 9 0.757
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 16430-16466 9 0.757
CP020380_11 11.18|1946763|36|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946763-1946798 36 NC_015390 Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence 33747-33782 9 0.75
CP020380_20 20.4|3460933|37|CP020380|CRISPRCasFinder,CRT 3460933-3460969 37 JN371769 Synechococcus phage metaG-MbCM1, complete genome 97464-97500 9 0.757
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 NZ_CP046302 Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence 12220-12252 9 0.727
CP020380_20 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT 3461330-3461362 33 MT074146 Bacteroides phage SJC03, complete genome 71744-71776 9 0.727
CP020380_20 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT 3461919-3461955 37 MN693953 Marine virus AFVG_250M577, complete genome 38694-38730 9 0.757
CP020380_20 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT 3463239-3463274 36 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 46390-46425 9 0.75
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 NZ_CP020004 Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed2, complete sequence 37459-37492 9 0.735
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 NC_048762 Bacillus phage vB_BtS_B83, complete genome 6545-6578 9 0.735
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 MT074146 Bacteroides phage SJC03, complete genome 71744-71777 9 0.735
CP020380_21 21.1|3744229|38|CP020380|CRISPRCasFinder 3744229-3744266 38 NZ_CP013716 Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence 38348-38385 9 0.763
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 MT932329 Campylobacter phage F379, complete genome 82494-82530 10 0.73
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 MT446421 UNVERIFIED: Escherichia virus TH55, complete genome 110583-110619 10 0.73
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 MT533174 Escherichia phage CJ20, complete genome 146195-146231 10 0.73
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 FN667788 Campylobacter phage CP220, complete genome 77257-77293 10 0.73
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NC_016820 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence 9475-9511 10 0.73
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NZ_AP017937 Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence 19940-19976 10 0.73
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NZ_CP014602 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence 15194-15230 10 0.73
CP020380_20 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT 3462183-3462219 37 NZ_CP014602 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence 50622-50658 10 0.73
CP020380_20 20.28|3462512|37|CP020380|CRISPRCasFinder,CRT 3462512-3462548 37 MN693392 Marine virus AFVG_25M95, complete genome 33202-33238 10 0.73
CP020380_20 20.42|3463435|35|CP020380|CRISPRCasFinder,CRT 3463435-3463469 35 AP014374 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, *** SEQUENCING IN PROGRESS *** 20462-20496 10 0.714
CP020380_20 20.52|3461330|34|CP020380|PILER-CR 3461330-3461363 34 NZ_CP046302 Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence 12219-12252 10 0.706
CP020380_20 20.81|3463239|37|CP020380|PILER-CR 3463239-3463275 37 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 46389-46425 10 0.73
CP020380_20 20.84|3463435|36|CP020380|PILER-CR 3463435-3463470 36 AP014374 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, *** SEQUENCING IN PROGRESS *** 20462-20497 10 0.722
CP020380_11 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT 1946697-1946733 37 CP011075 Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence 698312-698348 11 0.703
CP020380_13 13.4|2895038|35|CP020380|CRISPRCasFinder 2895038-2895072 35 NZ_CP031276 Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence 42154-42188 11 0.686
CP020380_20 20.32|3462777|37|CP020380|CRISPRCasFinder,CRT 3462777-3462813 37 MN694760 Marine virus AFVG_250M661, complete genome 45652-45688 11 0.703
CP020380_20 20.41|3463368|38|CP020380|CRISPRCasFinder,CRT 3463368-3463405 38 NZ_MN602039 Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence 9535-9572 11 0.711
CP020380_20 20.44|3463565|37|CP020380|CRISPRCasFinder,CRT 3463565-3463601 37 NZ_AP019826 Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence 3014-3050 11 0.703
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NC_016820 Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence 9475-9512 11 0.711
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NZ_AP017937 Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence 19939-19976 11 0.711
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NZ_CP014602 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence 15193-15230 11 0.711
CP020380_20 20.65|3462183|38|CP020380|PILER-CR 3462183-3462220 38 NZ_CP014602 Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence 50621-50658 11 0.711

1. spacer 4.1|144242|29|CP020380|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 10.5|1769666|38|CP020380|CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

3. spacer 10.5|1769666|38|CP020380|CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

4. spacer 10.5|1769666|38|CP020380|CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

ctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
ctcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
**************************************

5. spacer 11.2|1945710|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaagtgatagaatttcgtctcaattgagcaaagaat	CRISPR spacer
ttaagtgatagaatttcgtctcaattgagcaaagaat	Protospacer
*************************************

6. spacer 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

7. spacer 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

8. spacer 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

9. spacer 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

10. spacer 11.5|1945910|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tgtcattttttcacacctctcttatttatataataac	CRISPR spacer
tgtcattttttcacacctctcttatttatataataac	Protospacer
*************************************

11. spacer 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

12. spacer 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

13. spacer 11.6|1945976|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

ggtgtatttatgttggcaagaagcgttgatgaaatga	CRISPR spacer
ggtgtatttatgttggcaagaagcgttgatgaaatga	Protospacer
*************************************

14. spacer 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

15. spacer 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

16. spacer 11.9|1946172|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

tcggttaaatcacgaagtatttcgtttactgattcag	CRISPR spacer
tcggttaaatcacgaagtatttcgtttactgattcag	Protospacer
*************************************

17. spacer 11.14|1946501|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

gtataaattgaaatcagaaggttttattattgattta	CRISPR spacer
gtataaattgaaatcagaaggttttattattgattta	Protospacer
*************************************

18. spacer 11.15|1946567|35|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

ctattaactttaggtattttgtaagatttttcctc	CRISPR spacer
ctattaactttaggtattttgtaagatttttcctc	Protospacer
***********************************

19. spacer 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

20. spacer 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

21. spacer 11.16|1946631|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

catgaacattctctataatatgtgtgttcttcaacta	CRISPR spacer
catgaacattctctataatatgtgtgttcttcaacta	Protospacer
*************************************

22. spacer 20.7|3461134|35|CP020380|CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

actgcaatggataatataaacgatcttaaaaaaga	CRISPR spacer
actgcaatggataatataaacgatcttaaaaaaga	Protospacer
***********************************

23. spacer 20.14|3461591|37|CP020380|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

ctcttgcaaaatatcctttttctttcaaacaaaaagt	CRISPR spacer
ctcttgcaaaatatcctttttctttcaaacaaaaagt	Protospacer
*************************************

24. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccgaaaa	Protospacer
*************************************

25. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

26. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

27. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

28. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

29. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

30. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

31. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

32. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

33. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

34. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctc	Protospacer
*************************************

35. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

36. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

37. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

38. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

39. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

40. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

41. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaaga	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaaga	Protospacer
*************************************

42. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

43. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

44. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

45. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacat	Protospacer
*************************************

46. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
ccattatacattgtttcaagcttcttttgtacttcttt	Protospacer
**************************************

47. spacer 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

48. spacer 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

49. spacer 20.30|3462645|37|CP020380|CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

atatggctacaagttttgaaagtaaaaatgtaataaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaa	Protospacer
*************************************

50. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

51. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

52. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

53. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

54. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

55. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

56. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

57. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

58. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

59. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

60. spacer 20.31|3462711|37|CP020380|CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactct	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactct	Protospacer
*************************************

61. spacer 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

62. spacer 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

63. spacer 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

64. spacer 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattg	Protospacer
************************************

65. spacer 20.36|3463041|37|CP020380|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaa	Protospacer
*************************************

66. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

67. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

68. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

69. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

70. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
attttcaactcatcatctccaatatcatctttactt	Protospacer
************************************

71. spacer 20.64|3462117|38|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

72. spacer 20.64|3462117|38|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

73. spacer 20.64|3462117|38|CP020380|PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

74. spacer 20.64|3462117|38|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

75. spacer 20.64|3462117|38|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

76. spacer 20.64|3462117|38|CP020380|PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

77. spacer 20.64|3462117|38|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gaaaaggctaagaatgaatgactttttctataaaagaa	CRISPR spacer
gaaaaggctaagaatgaatgactttttctataaaagaa	Protospacer
**************************************

78. spacer 20.73|3462711|38|CP020380|PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

79. spacer 20.73|3462711|38|CP020380|PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

80. spacer 20.73|3462711|38|CP020380|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

81. spacer 20.73|3462711|38|CP020380|PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

82. spacer 20.73|3462711|38|CP020380|PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

83. spacer 20.73|3462711|38|CP020380|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

84. spacer 20.73|3462711|38|CP020380|PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

85. spacer 20.73|3462711|38|CP020380|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

86. spacer 20.73|3462711|38|CP020380|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

87. spacer 20.73|3462711|38|CP020380|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

88. spacer 20.73|3462711|38|CP020380|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

aaacgacattaatatttagttaatgaaacttcactcta	CRISPR spacer
aaacgacattaatatttagttaatgaaacttcactcta	Protospacer
**************************************

89. spacer 20.78|3463041|38|CP020380|PILER-CR matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

cttatttcaaagaaagatattgttataaaacaaaaaaa	CRISPR spacer
cttatttcaaagaaagatattgttataaaacaaaaaaa	Protospacer
**************************************

90. spacer 20.81|3463239|37|CP020380|PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatatcatctttactta	Protospacer
*************************************

91. spacer 20.81|3463239|37|CP020380|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatatcatctttactta	Protospacer
*************************************

92. spacer 20.81|3463239|37|CP020380|PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatatcatctttactta	Protospacer
*************************************

93. spacer 20.81|3463239|37|CP020380|PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatatcatctttactta	Protospacer
*************************************

94. spacer 20.81|3463239|37|CP020380|PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
attttcaactcatcatctccaatatcatctttactta	Protospacer
*************************************

95. spacer 23.6|3831337|35|CP020380|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

96. spacer 23.6|3831337|35|CP020380|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

97. spacer 23.6|3831337|35|CP020380|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

98. spacer 23.6|3831337|35|CP020380|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

99. spacer 23.6|3831337|35|CP020380|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gcagcaggattatatgaagcagatggtggagcatg	CRISPR spacer
gcagcaggattatatgaagcagatggtggagcatg	Protospacer
***********************************

100. spacer 2.1|128816|34|CP020380|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

101. spacer 3.1|135706|34|CP020380|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

102. spacer 5.1|151711|34|CP020380|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

103. spacer 9.1|1661727|38|CP020380|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

gttttttggggtgcagttgcgagtccaaccccctcttt	CRISPR spacer
cttttttggggtgcagttgcgagtccaaccccctcttt	Protospacer
 *************************************

104. spacer 10.1|1769665|39|CP020380|PILER-CR,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

105. spacer 10.1|1769665|39|CP020380|PILER-CR,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

106. spacer 10.1|1769665|39|CP020380|PILER-CR,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.974

tctcttacgctttttcaatcacttttttccttgctaaaa	CRISPR spacer
actcttacgctttttcaatcacttttttccttgctaaaa	Protospacer
 **************************************

107. spacer 10.2|1769732|38|CP020380|PILER-CR,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

ttgcggtatattggaattgaacaggatgatttaaacaa	CRISPR spacer
ttgcgttatattggaattgaacaggatgatttaaacaa	Protospacer
***** ********************************

108. spacer 10.6|1769733|37|CP020380|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

tgcggtatattggaattgaacaggatgatttaaacaa	CRISPR spacer
tgcgttatattggaattgaacaggatgatttaaacaa	Protospacer
**** ********************************

109. spacer 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.972

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
ctgagtaacaaggatttttattaaaagtactatcag	Protospacer
*****************************.******

110. spacer 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.972

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
ctgagtaacaaggatttttattaaaagtactatcag	Protospacer
*****************************.******

111. spacer 11.8|1946107|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.972

tatctttagaataacagtatccatcataattatttg	CRISPR spacer
tatctttagaataacagtatccattataattatttg	Protospacer
************************.***********

112. spacer 11.8|1946107|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.972

tatctttagaataacagtatccatcataattatttg	CRISPR spacer
tatctttagaataacagtatccattataattatttg	Protospacer
************************.***********

113. spacer 11.12|1946370|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

gctggtaagtttgattttatatcatggtagtaagcag	CRISPR spacer
gctggtaagtttgattttatatcatggtagtaagcac	Protospacer
************************************ 

114. spacer 11.12|1946370|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

gctggtaagtttgattttatatcatggtagtaagcag	CRISPR spacer
gctggtaagtttgattttatatcatggtagtaagcac	Protospacer
************************************ 

115. spacer 13.1|2895037|36|CP020380|PILER-CR,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

ctttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
ctttgcttataaagtagtagacgaagctaaaaagtt	Protospacer
**********************************.*

116. spacer 13.4|2895038|35|CP020380|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.971

tttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
tttgcttataaagtagtagacgaagctaaaaagtt	Protospacer
*********************************.*

117. spacer 14.4|3108298|38|CP020380|CRISPRCasFinder,CRT,PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.974

tgtaattccattattaaaagtatttggggattttgcat	CRISPR spacer
tgtaattccattgttaaaagtatttggggattttgcat	Protospacer
************.*************************

118. spacer 14.4|3108298|38|CP020380|CRISPRCasFinder,CRT,PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.974

tgtaattccattattaaaagtatttggggattttgcat	CRISPR spacer
tgtaattccattgttaaaagtatttggggattttgcat	Protospacer
************.*************************

119. spacer 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.972

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaattaag	Protospacer
*********.**************************

120. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

121. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

122. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

123. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaa	Protospacer
********************************.****

124. spacer 20.20|3461985|37|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

aagttttgcatgtaccagcgagctaaaaatttttctc	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttctctc	Protospacer
********************************.****

125. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

126. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacat	Protospacer
********* ***************************

127. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacat	Protospacer
********* ***************************

128. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

129. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

130. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcat	Protospacer
*********************************.***

131. spacer 20.28|3462512|37|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

cagtatcatccataaaaccatcaaattcagccaataa	CRISPR spacer
cagtatcatccataaaaccatcaaatttagccaataa	Protospacer
***************************.*********

132. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

133. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

134. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaag	Protospacer
**********************.**************

135. spacer 20.49|3461134|36|CP020380|PILER-CR matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.972

actgcaatggataatataaacgatcttaaaaaagac	CRISPR spacer
actgcaatggataatataaacgatcttaaaaaagat	Protospacer
***********************************.

136. spacer 20.56|3461591|38|CP020380|PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

ctcttgcaaaatatcctttttctttcaaacaaaaagta	CRISPR spacer
ctcttgcaaaatatcctttttctttcaaacaaaaagtt	Protospacer
************************************* 

137. spacer 20.61|3461919|38|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

aaggaaaaagaaataataaaagaatttactccgaaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccgaaaat	Protospacer
************************************* 

138. spacer 20.62|3461985|38|CP020380|PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

139. spacer 20.62|3461985|38|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

140. spacer 20.62|3461985|38|CP020380|PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

141. spacer 20.62|3461985|38|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

142. spacer 20.62|3461985|38|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

143. spacer 20.62|3461985|38|CP020380|PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

144. spacer 20.62|3461985|38|CP020380|PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

145. spacer 20.62|3461985|38|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

146. spacer 20.62|3461985|38|CP020380|PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

147. spacer 20.62|3461985|38|CP020380|PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.974

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttttctct	Protospacer
************************************* 

148. spacer 20.65|3462183|38|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacatt	Protospacer
************************************* 

149. spacer 20.65|3462183|38|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacatt	Protospacer
************************************* 

150. spacer 20.65|3462183|38|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacatt	Protospacer
************************************* 

151. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.974

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaaacatt	Protospacer
************************************* 

152. spacer 20.70|3462512|38|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

cagtatcatccataaaaccatcaaattcagccaataaa	CRISPR spacer
cagtatcatccataaaaccatcaaatttagccaataaa	Protospacer
***************************.**********

153. spacer 20.71|3462578|39|CP020380|PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 1, identity: 0.974

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
ccattatacattgtttcaagcttcttttgtacttctttt	Protospacer
************************************** 

154. spacer 20.72|3462645|38|CP020380|PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.974

atatggctacaagttttgaaagtaaaaatgtaataaaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaat	Protospacer
************************************* 

155. spacer 20.72|3462645|38|CP020380|PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.974

atatggctacaagttttgaaagtaaaaatgtaataaaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaat	Protospacer
************************************* 

156. spacer 20.72|3462645|38|CP020380|PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.974

atatggctacaagttttgaaagtaaaaatgtaataaaa	CRISPR spacer
atatggctacaagttttgaaagtaaaaatgtaataaat	Protospacer
************************************* 

157. spacer 20.75|3462843|37|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

agacacacctcgcacagatgcagaaagttccaattga	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattgt	Protospacer
************************************ 

158. spacer 20.75|3462843|37|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

agacacacctcgcacagatgcagaaagttccaattga	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattgt	Protospacer
************************************ 

159. spacer 20.75|3462843|37|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

agacacacctcgcacagatgcagaaagttccaattga	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattgt	Protospacer
************************************ 

160. spacer 20.75|3462843|37|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

agacacacctcgcacagatgcagaaagttccaattga	CRISPR spacer
agacacacctcgcacagatgcagaaagttccaattgt	Protospacer
************************************ 

161. spacer 23.2|3831049|35|CP020380|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.971

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagt	Protospacer
************************.**********

162. spacer 23.2|3831049|35|CP020380|CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.971

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagt	Protospacer
************************.**********

163. spacer 23.14|3831270|39|CP020380|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.974

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 **************************************

164. spacer 23.15|3831336|38|CP020380|CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

165. spacer 23.15|3831336|38|CP020380|CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

166. spacer 23.15|3831336|38|CP020380|CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

167. spacer 23.15|3831336|38|CP020380|CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

168. spacer 23.15|3831336|38|CP020380|CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.974

cgcagcaggattatatgaagcagatggtggagcatgga	CRISPR spacer
agcagcaggattatatgaagcagatggtggagcatgga	Protospacer
 *************************************

169. spacer 1.1|31941|38|CP020380|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

tagcaacagaataaactgaacgcatgtgaagtttgttt	CRISPR spacer
aagcaacagaataaactgaacacatgtgaagtttgttt	Protospacer
 ********************.****************

170. spacer 11.15|1946567|35|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.943

ctattaactttaggtattttgtaagatttttcctc	CRISPR spacer
ctattaactctaggtattttgtaagacttttcctc	Protospacer
*********.****************.********

171. spacer 13.2|2895102|37|CP020380|PILER-CR,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

agtaactgaaacaaatagagaaaaggcagtttacaga	CRISPR spacer
agtaactgaaacaaatagagaaaaagcagtttataga	Protospacer
************************.********.***

172. spacer 13.3|2895168|38|CP020380|PILER-CR,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

173. spacer 13.3|2895168|38|CP020380|PILER-CR,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

174. spacer 13.3|2895168|38|CP020380|PILER-CR,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.947

atgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
atgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*********************..***************

175. spacer 13.5|2895103|36|CP020380|CRISPRCasFinder matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.944

gtaactgaaacaaatagagaaaaggcagtttacaga	CRISPR spacer
gtaactgaaacaaatagagaaaaagcagtttataga	Protospacer
***********************.********.***

176. spacer 13.6|2895169|37|CP020380|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

177. spacer 13.6|2895169|37|CP020380|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

178. spacer 13.6|2895169|37|CP020380|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.946

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tgttatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
********************..***************

179. spacer 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

180. spacer 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

181. spacer 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

182. spacer 20.9|3461265|36|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.944

tagttttatatcttgcaaataacttaaaaaattaag	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttag	Protospacer
*********.*********************** **

183. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttgtatataaaaataattaaa	Protospacer
**************.*************.****

184. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

185. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

186. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

187. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

188. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.939

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaa	Protospacer
****************.********.*******

189. spacer 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

190. spacer 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

191. spacer 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

192. spacer 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

193. spacer 20.11|3461392|38|CP020380|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

aaaaatgtagaaagtgaccttatagccaatgtaagacc	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacc	Protospacer
**************************.*.*********

194. spacer 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

195. spacer 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

196. spacer 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

197. spacer 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

198. spacer 20.12|3461459|37|CP020380|CRISPRCasFinder,CRT matches to AY522340 (Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds) position: , mismatch: 2, identity: 0.946

ttatcacatatttaaactcgccttttctattaatata	CRISPR spacer
ttattacatatttaaactcaccttttctattaatata	Protospacer
****.**************.*****************

199. spacer 20.24|3462249|37|CP020380|CRISPRCasFinder,CRT matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 2, identity: 0.946

taattacattattttctaaaatcgctcttataactgc	CRISPR spacer
taattacattattttctaaaatcgcttttataacagc	Protospacer
**************************.******* **

200. spacer 20.24|3462249|37|CP020380|CRISPRCasFinder,CRT matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 2, identity: 0.946

taattacattattttctaaaatcgctcttataactgc	CRISPR spacer
taattacattattttctaaaatcgcttttataacagc	Protospacer
**************************.******* **

201. spacer 20.33|3462843|36|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.944

agacacacctcgcacagatgcagaaagttccaattg	CRISPR spacer
agacacacctcgcacagatgcagaaagctctaattg	Protospacer
***************************.**.*****

202. spacer 20.35|3462975|37|CP020380|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

taacagcaataaagaacactaacaaaaaagctaaaag	CRISPR spacer
taacagcaataaagaacactaataaaaaaactaaaag	Protospacer
**********************.******.*******

203. spacer 20.51|3461265|37|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.946

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaattaagt	Protospacer
*********.**************************.

204. spacer 20.52|3461330|34|CP020380|PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttgtatataaaaataattaaaa	Protospacer
**************.*************.*****

205. spacer 20.52|3461330|34|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

206. spacer 20.52|3461330|34|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

207. spacer 20.52|3461330|34|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

208. spacer 20.52|3461330|34|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

209. spacer 20.52|3461330|34|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.941

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
gcgaaagaactgttatgtataaaaacaactaaaa	Protospacer
****************.********.********

210. spacer 20.61|3461919|38|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

aaggaaaaagaaataataaaagaatttactccgaaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaat	Protospacer
********************************.**** 

211. spacer 20.61|3461919|38|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.947

aaggaaaaagaaataataaaagaatttactccgaaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaat	Protospacer
********************************.**** 

212. spacer 20.61|3461919|38|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

aaggaaaaagaaataataaaagaatttactccgaaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaat	Protospacer
********************************.**** 

213. spacer 20.61|3461919|38|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

aaggaaaaagaaataataaaagaatttactccgaaaaa	CRISPR spacer
aaggaaaaagaaataataaaagaatttactccaaaaat	Protospacer
********************************.**** 

214. spacer 20.62|3461985|38|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.947

aagttttgcatgtaccagcgagctaaaaatttttctca	CRISPR spacer
aagttttgcatgtaccagcgagctaaaaatttctctct	Protospacer
********************************.**** 

215. spacer 20.65|3462183|38|CP020380|PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacatt	Protospacer
********* *************************** 

216. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcatt	Protospacer
*********************************.*** 

217. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggttaaagaaaataagttatttttcaaaacatt	Protospacer
********* *************************** 

218. spacer 20.65|3462183|38|CP020380|PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcatt	Protospacer
*********************************.*** 

219. spacer 20.65|3462183|38|CP020380|PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcatt	Protospacer
*********************************.*** 

220. spacer 20.65|3462183|38|CP020380|PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.947

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttcaaagcatt	Protospacer
*********************************.*** 

221. spacer 20.77|3462975|38|CP020380|PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.947

taacagcaataaagaacactaacaaaaaagctaaaaga	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaagt	Protospacer
**********************.************** 

222. spacer 20.77|3462975|38|CP020380|PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.947

taacagcaataaagaacactaacaaaaaagctaaaaga	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaagt	Protospacer
**********************.************** 

223. spacer 20.77|3462975|38|CP020380|PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.947

taacagcaataaagaacactaacaaaaaagctaaaaga	CRISPR spacer
taacagcaataaagaacactaataaaaaagctaaaagt	Protospacer
**********************.************** 

224. spacer 23.2|3831049|35|CP020380|CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.943

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaac	Protospacer
*********************************..

225. spacer 23.2|3831049|35|CP020380|CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.943

agtttttgataacttaaaatctagctttgcagagt	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaac	Protospacer
*********************************..

226. spacer 23.14|3831270|39|CP020380|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

227. spacer 23.14|3831270|39|CP020380|CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

228. spacer 23.14|3831270|39|CP020380|CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

229. spacer 23.14|3831270|39|CP020380|CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

230. spacer 23.14|3831270|39|CP020380|CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

231. spacer 23.14|3831270|39|CP020380|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

232. spacer 23.14|3831270|39|CP020380|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

233. spacer 23.14|3831270|39|CP020380|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaaataa	Protospacer
 *****************.********************

234. spacer 23.14|3831270|39|CP020380|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.949

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atttttgaagtgttttgtaactctcaaaaatgaaaataa	Protospacer
 ** ***********************************

235. spacer 23.19|3831049|37|CP020380|PILER-CR matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagtta	Protospacer
************************.*********** 

236. spacer 23.19|3831049|37|CP020380|PILER-CR matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.946

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagttttgcagagtta	Protospacer
************************.*********** 

237. spacer 6.2|300505|37|CP020380|CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.919

tgtttatcttttcattgttcatgtacatttcattgaa	CRISPR spacer
tatttatcttttcattattcatatacatttcattgaa	Protospacer
*.**************.*****.**************

238. spacer 6.5|300506|36|CP020380|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.917

gtttatcttttcattgttcatgtacatttcattgaa	CRISPR spacer
atttatcttttcattattcatatacatttcattgaa	Protospacer
.**************.*****.**************

239. spacer 11.7|1946042|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

ctgagtaacaaggatttttattaaaagtattatcag	CRISPR spacer
cactgtaacaaggatttttattaaaagtattatcag	Protospacer
*   ********************************

240. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

241. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

242. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

243. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

244. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

245. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

246. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

247. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

248. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

249. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

250. spacer 11.13|1946436|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 3, identity: 0.917

ttaaatccaaattgtttacctgcaacagaaatgtct	CRISPR spacer
ctgaatccaaattgtttccctgcaacagaaatgtct	Protospacer
.*.************** ******************

251. spacer 13.6|2895169|37|CP020380|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.919

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tattatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*.******************..***************

252. spacer 13.6|2895169|37|CP020380|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

tgttatttacctaaaaagatgtaaatttgcttaaaaa	CRISPR spacer
tattatttacctaaaaagatacaaatttgcttaaaaa	Protospacer
*.******************..***************

253. spacer 20.51|3461265|37|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

254. spacer 20.51|3461265|37|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

255. spacer 20.51|3461265|37|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

256. spacer 20.51|3461265|37|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.919

tagttttatatcttgcaaataacttaaaaaattaagc	CRISPR spacer
tagttttatgtcttgcaaataacttaaaaaatttagt	Protospacer
*********.*********************** **.

257. spacer 20.53|3461392|39|CP020380|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.********* 

258. spacer 20.53|3461392|39|CP020380|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.********* 

259. spacer 20.53|3461392|39|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.********* 

260. spacer 20.53|3461392|39|CP020380|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.********* 

261. spacer 20.53|3461392|39|CP020380|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.923

aaaaatgtagaaagtgaccttatagccaatgtaagacca	CRISPR spacer
aaaaatgtagaaagtgaccttatagctagtgtaagacct	Protospacer
**************************.*.********* 

262. spacer 20.54|3461459|38|CP020380|PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 3, identity: 0.921

ttatcacatatttaaactcgccttttctattaatataa	CRISPR spacer
ttattacatatttaaactcaccttttctattaatatat	Protospacer
****.**************.***************** 

263. spacer 20.54|3461459|38|CP020380|PILER-CR matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 3, identity: 0.921

ttatcacatatttaaactcgccttttctattaatataa	CRISPR spacer
ttattacatatttaaactcaccttttctattaatatat	Protospacer
****.**************.***************** 

264. spacer 20.54|3461459|38|CP020380|PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 3, identity: 0.921

ttatcacatatttaaactcgccttttctattaatataa	CRISPR spacer
ttattacatatttaaactcaccttttctattaatatat	Protospacer
****.**************.***************** 

265. spacer 20.54|3461459|38|CP020380|PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 3, identity: 0.921

ttatcacatatttaaactcgccttttctattaatataa	CRISPR spacer
ttattacatatttaaactcaccttttctattaatatat	Protospacer
****.**************.***************** 

266. spacer 20.54|3461459|38|CP020380|PILER-CR matches to AY522340 (Clostridium difficile phage phiC2 isolate RW11 portal protein and hypothetical protein genes, complete cds) position: , mismatch: 3, identity: 0.921

ttatcacatatttaaactcgccttttctattaatataa	CRISPR spacer
ttattacatatttaaactcaccttttctattaatatat	Protospacer
****.**************.***************** 

267. spacer 20.66|3462249|38|CP020380|PILER-CR matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 3, identity: 0.921

taattacattattttctaaaatcgctcttataactgca	CRISPR spacer
taattacattattttctaaaatcgcttttataacagct	Protospacer
**************************.******* ** 

268. spacer 20.66|3462249|38|CP020380|PILER-CR matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 3, identity: 0.921

taattacattattttctaaaatcgctcttataactgca	CRISPR spacer
taattacattattttctaaaatcgcttttataacagct	Protospacer
**************************.******* ** 

269. spacer 20.75|3462843|37|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.919

agacacacctcgcacagatgcagaaagttccaattga	CRISPR spacer
agacacacctcgcacagatgcagaaagctctaattgt	Protospacer
***************************.**.***** 

270. spacer 20.77|3462975|38|CP020380|PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 3, identity: 0.921

taacagcaataaagaacactaacaaaaaagctaaaaga	CRISPR spacer
taacagcaataaagaacactaataaaaaaactaaaagt	Protospacer
**********************.******.******* 

271. spacer 23.11|3831048|38|CP020380|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagttttgcagagtta	Protospacer
.************************.*********** 

272. spacer 23.11|3831048|38|CP020380|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 3, identity: 0.921

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagttttgcagagtta	Protospacer
.************************.*********** 

273. spacer 23.14|3831270|39|CP020380|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.923

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtaactctcaaaaactaaaataa	Protospacer
 *****************************. *******

274. spacer 23.19|3831049|37|CP020380|PILER-CR matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 3, identity: 0.919

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaacta	Protospacer
*********************************..* 

275. spacer 23.19|3831049|37|CP020380|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 3, identity: 0.919

agtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
agtttttgataacttaaaatctagctttgcagaacta	Protospacer
*********************************..* 

276. spacer 22.2|3771182|27|CP020380|CRT matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccagttgccccagttgctcctgtcgcc	Protospacer
**.********************  .*

277. spacer 22.2|3771182|27|CP020380|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttgccccggttgctcctgttgcc	Protospacer
***********.***********  .*

278. spacer 22.2|3771182|27|CP020380|CRT matches to MN693514 (Marine virus AFVG_25M225, complete genome) position: , mismatch: 4, identity: 0.852

ccggttgccccagttgctcctgtattc	CRISPR spacer
cccattgccccagttgcgcctgtatta	Protospacer
** .************* ******** 

279. spacer 23.11|3831048|38|CP020380|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 4, identity: 0.895

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagctttgcagaacta	Protospacer
.*********************************..* 

280. spacer 23.11|3831048|38|CP020380|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 4, identity: 0.895

tagtttttgataacttaaaatctagctttgcagagttc	CRISPR spacer
cagtttttgataacttaaaatctagctttgcagaacta	Protospacer
.*********************************..* 

281. spacer 23.14|3831270|39|CP020380|CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 4, identity: 0.897

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
attgttgaagtgttttgtgactctcaaaaatgaaataaa	Protospacer
 *****************.****************  **

282. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 5, identity: 0.865

gaaaaggctaagaatgaatgactttttctataaaaga-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggtt	Protospacer
***************************     *****     

283. spacer 20.22|3462117|37|CP020380|CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 5, identity: 0.865

gaaaaggctaagaatgaatgactttttctataaaaga-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggtt	Protospacer
***************************     *****     

284. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 5, identity: 0.865

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
agagtggtttaagaaaataagttatttttaatctgat	Protospacer
***************************** *    **

285. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

286. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

287. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

288. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

289. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

290. spacer 20.29|3462578|38|CP020380|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 5, identity: 0.868

ccattatacattgtttcaagcttcttttgtacttcttt	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttcctt	Protospacer
**  .***************.**************.**

291. spacer 20.64|3462117|38|CP020380|PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 5, identity: 0.868

gaaaaggctaagaatgaatgactttttctataaaagaa-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggttg	Protospacer
***************************     ******     

292. spacer 20.64|3462117|38|CP020380|PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 5, identity: 0.868

gaaaaggctaagaatgaatgactttttctataaaagaa-----	CRISPR spacer
gaaaaggctaagaatgaatgacttttt-----aaagaaggttg	Protospacer
***************************     ******     

293. spacer 22.2|3771182|27|CP020380|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttggcccagttgctcctgtcgat	Protospacer
******* ***************   .

294. spacer 22.2|3771182|27|CP020380|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttggcccagttgctcctgtcgat	Protospacer
******* ***************   .

295. spacer 22.2|3771182|27|CP020380|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgccccggttgctcctgttgcc	Protospacer
** ********.***********  .*

296. spacer 22.2|3771182|27|CP020380|CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.815

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgccccggttgctcctgttgcc	Protospacer
** ********.***********  .*

297. spacer 23.14|3831270|39|CP020380|CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

298. spacer 23.14|3831270|39|CP020380|CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

299. spacer 23.14|3831270|39|CP020380|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

300. spacer 23.14|3831270|39|CP020380|CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

301. spacer 23.14|3831270|39|CP020380|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 5, identity: 0.872

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
atcattgagatgttttgtaactctcaaaaatgaaaataa	Protospacer
 *..****..*****************************

302. spacer 4.1|144242|29|CP020380|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

303. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 6, identity: 0.842

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
agagtggtttaagaaaataagttatttttaatctgatt	Protospacer
***************************** *    ** 

304. spacer 20.71|3462578|39|CP020380|PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

305. spacer 20.71|3462578|39|CP020380|PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

306. spacer 20.71|3462578|39|CP020380|PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

307. spacer 20.71|3462578|39|CP020380|PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

308. spacer 20.71|3462578|39|CP020380|PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

309. spacer 20.71|3462578|39|CP020380|PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 6, identity: 0.846

ccattatacattgtttcaagcttcttttgtacttcttta	CRISPR spacer
cctgcatacattgtttcaagtttcttttgtacttccttt	Protospacer
**  .***************.**************.** 

310. spacer 22.2|3771182|27|CP020380|CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
gcggtagccccagttgctcctgcgtat	Protospacer
 **** ****************..* .

311. spacer 22.2|3771182|27|CP020380|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
ccggttgcccctgttggtcctgttggg	Protospacer
*********** **** ******    

312. spacer 22.2|3771182|27|CP020380|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.778

ccggttgccccagttgctcctgtattc	CRISPR spacer
cctgttgctccagttgctcctgtcact	Protospacer
** *****.**************  ..

313. spacer 23.14|3831270|39|CP020380|CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 7, identity: 0.821

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
tatcattagatgttttgtaactctcaaaaatgaaaataa	Protospacer
. *  * *..*****************************

314. spacer 23.14|3831270|39|CP020380|CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 7, identity: 0.821

cttgttgaagtgttttgtaactctcaaaaatgaaaataa	CRISPR spacer
tatcattagatgttttgtaactctcaaaaatgaaaataa	Protospacer
. *  * *..*****************************

315. spacer 10.7|1769799|36|CP020380|CRISPRCasFinder matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 8, identity: 0.778

gatgtaaccgcacagatattctggctaaagaatcgt	CRISPR spacer
aacacaaccgcacagatattctggttgaagaatagg	Protospacer
.*...*******************.*.****** * 

316. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

317. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

318. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

319. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

320. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

321. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

322. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to CP049615 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

323. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

324. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

325. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

326. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

327. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

328. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

329. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

330. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

331. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

332. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

333. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

334. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

335. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

336. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

337. spacer 14.2|3108167|37|CP020380|CRISPRCasFinder,CRT matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 8, identity: 0.784

ttaaataaaaaactaaatctattggaaaaatatgtta	CRISPR spacer
gaaaatataaaactagatctattggaaaaagaaattc	Protospacer
  ***** *******.************** * .** 

338. spacer 10.3|1769798|37|CP020380|PILER-CR,CRT matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 9, identity: 0.757

tgatgtaaccgcacagatattctggctaaagaatcgt	CRISPR spacer
aaacacaaccgcacagatattctggttgaagaatagg	Protospacer
 .*...*******************.*.****** * 

339. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*. 

340. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*. 

341. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.757

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttatagtttttaatatttgaatttatcaaa	Protospacer
.***********.***** ********.*  **.*. 

342. spacer 11.18|1946763|36|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to NC_015390 (Carnobacterium sp. 17-4 plasmid pCAR50, complete sequence) position: , mismatch: 9, identity: 0.75

tttataccaacaattttcttctccatacttttccat	CRISPR spacer
tatataccgataattttcttctccatacataaaatt	Protospacer
* ******.*.***************** *     *

343. spacer 20.4|3460933|37|CP020380|CRISPRCasFinder,CRT matches to JN371769 (Synechococcus phage metaG-MbCM1, complete genome) position: , mismatch: 9, identity: 0.757

tagcaacagcaagagtagtaacaacattaacaatttc	CRISPR spacer
tagcagcagaaagagtagtaacaacagttccatctct	Protospacer
*****.*** **************** *  ** .*..

344. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to NZ_CP046302 (Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

gcgaaagaa------ctgttatatataaaaataactaaa	CRISPR spacer
------taattcctcctattatatttaaaaataactaaa	Protospacer
       **      **.****** **************

345. spacer 20.10|3461330|33|CP020380|CRISPRCasFinder,CRT matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.727

gcgaaagaactgttatatataaaaataactaaa	CRISPR spacer
tccaaagagctgttatatataataatactagta	Protospacer
 * *****.************* **** . . *

346. spacer 20.19|3461919|37|CP020380|CRISPRCasFinder,CRT matches to MN693953 (Marine virus AFVG_250M577, complete genome) position: , mismatch: 9, identity: 0.757

aaggaaaaagaaataataaaagaatttactccgaaaa	CRISPR spacer
aaggaaaaagaaattataaaaaaattgttacgataaa	Protospacer
************** ******.****  . * . ***

347. spacer 20.39|3463239|36|CP020380|CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.75

attttcaactcatcatctccaatatcatctttactt	CRISPR spacer
tctaagaatccatcatcttcaatatcatctttattt	Protospacer
 .*   **..********.**************.**

348. spacer 20.52|3461330|34|CP020380|PILER-CR matches to NZ_CP020004 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tgaataggtgtgttatatacaaaaataacaaaaa	Protospacer
  .* **.  *********.********* ****

349. spacer 20.52|3461330|34|CP020380|PILER-CR matches to NC_048762 (Bacillus phage vB_BtS_B83, complete genome) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tgaataggtgtgttatatacaaaaataacaaaaa	Protospacer
  .* **.  *********.********* ****

350. spacer 20.52|3461330|34|CP020380|PILER-CR matches to MT074146 (Bacteroides phage SJC03, complete genome) position: , mismatch: 9, identity: 0.735

gcgaaagaactgttatatataaaaataactaaaa	CRISPR spacer
tccaaagagctgttatatataataatactagtaa	Protospacer
 * *****.************* **** . . **

351. spacer 21.1|3744229|38|CP020380|CRISPRCasFinder matches to NZ_CP013716 (Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence) position: , mismatch: 9, identity: 0.763

gtttattatacttctttagattaattttctatatttct	CRISPR spacer
gtaacattttgttcattagatttattttctatatttct	Protospacer
**    * *  *** ******* ***************

352. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MT932329 (Campylobacter phage F379, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
tgtataaaaataattttttatatttaattaaattata	Protospacer
  *.**   ****************.* *******  

353. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MT446421 (UNVERIFIED: Escherichia virus TH55, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttataatcttttaaatttgaaacaatacat	Protospacer
.*************.***** ******.  ***  ..

354. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to MT533174 (Escherichia phage CJ20, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
actgtatttataatcttttaaatttgaaacaatacat	Protospacer
.*************.***** ******.  ***  ..

355. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 10, identity: 0.73

gctgtatttataattttttatatttgagtaaattagc	CRISPR spacer
tgtataaaaataattttttatatttaattaaattata	Protospacer
  *.**   ****************.* *******  

356. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NC_016820 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

357. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NZ_AP017937 (Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

358. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

359. spacer 20.23|3462183|37|CP020380|CRISPRCasFinder,CRT matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 10, identity: 0.73

agagtggtttaagaaaataagttatttttcaaaacat	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacat	Protospacer
  * .  .*.****** ************ *******

360. spacer 20.28|3462512|37|CP020380|CRISPRCasFinder,CRT matches to MN693392 (Marine virus AFVG_25M95, complete genome) position: , mismatch: 10, identity: 0.73

cagtatcatccataaaaccatcaaattcagccaataa	CRISPR spacer
caagttcatcaatcaaaccatcaaattcagctacatc	Protospacer
**.  ***** ** *****************.*    

361. spacer 20.42|3463435|35|CP020380|CRISPRCasFinder,CRT matches to AP014374 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.714

acagttcctgatgttgagaatccttctttgcccgt	CRISPR spacer
acagttcttcatgttgagaatccttcaactacaaa	Protospacer
*******.* ****************  .  * . 

362. spacer 20.52|3461330|34|CP020380|PILER-CR matches to NZ_CP046302 (Staphylococcus hominis strain FDAARGOS_747 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gcgaaagaa------ctgttatatataaaaataactaaaa	CRISPR spacer
------taattcctcctattatatttaaaaataactaaac	Protospacer
       **      **.****** ************** 

363. spacer 20.81|3463239|37|CP020380|PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 10, identity: 0.73

attttcaactcatcatctccaatatcatctttactta	CRISPR spacer
tctaagaatccatcatcttcaatatcatctttatttc	Protospacer
 .*   **..********.**************.** 

364. spacer 20.84|3463435|36|CP020380|PILER-CR matches to AP014374 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C54, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.722

acagttcctgatgttgagaatccttctttgcccgta	CRISPR spacer
acagttcttcatgttgagaatccttcaactacaaaa	Protospacer
*******.* ****************  .  * . *

365. spacer 11.17|1946697|37|CP020380|PILER-CR,CRISPRCasFinder,CRT matches to CP011075 (Brevibacillus laterosporus strain B9 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.703

gctgtatttataattttttatatttgagtaaattagc--	CRISPR spacer
ttcacatttataattttttgtgtttgagtaa--cagtca	Protospacer
 ....**************.*.*********  .**.  

366. spacer 13.4|2895038|35|CP020380|CRISPRCasFinder matches to NZ_CP031276 (Staphylococcus xylosus strain 2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.686

tttgcttataaagtagtagacgaagctaaaaagct	CRISPR spacer
gaaaaatctaaagcagtagacaaagctaaaaagaa	Protospacer
   .  * *****.*******.***********  

367. spacer 20.32|3462777|37|CP020380|CRISPRCasFinder,CRT matches to MN694760 (Marine virus AFVG_250M661, complete genome) position: , mismatch: 11, identity: 0.703

aaaagaacttggagttaaagaaaaagtatttgtatca	CRISPR spacer
cgatgcgacgggagttaaagaaaaaatatctgtatct	Protospacer
 .* * . . ***************.***.****** 

368. spacer 20.41|3463368|38|CP020380|CRISPRCasFinder,CRT matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 11, identity: 0.711

cagaattcatcacaaatttatgctaaaattttattgaa	CRISPR spacer
tttttctcatcacaaattttttctaaaattttaagtaa	Protospacer
.    .************* * ***********   **

369. spacer 20.44|3463565|37|CP020380|CRISPRCasFinder,CRT matches to NZ_AP019826 (Leptotrichia hofstadii strain JCM16775 plasmid pJCM16775-3, complete sequence) position: , mismatch: 11, identity: 0.703

agttttgatattttcttttaatacatttaaaaaatag	CRISPR spacer
ttgcctgttattttcttttaacacatttaaagcaaaa	Protospacer
   ..** *************.*********. * *.

370. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NC_016820 (Leuconostoc mesenteroides subsp. mesenteroides J18 plasmid pKLE02, complete sequence) position: , mismatch: 11, identity: 0.711

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacatt	Protospacer
  * .  .*.****** ************ ******* 

371. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NZ_AP017937 (Leuconostoc mesenteroides strain LK-151 plasmid pLm151-a, complete sequence) position: , mismatch: 11, identity: 0.711

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacatt	Protospacer
  * .  .*.****** ************ ******* 

372. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 11, identity: 0.711

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacatt	Protospacer
  * .  .*.****** ************ ******* 

373. spacer 20.65|3462183|38|CP020380|PILER-CR matches to NZ_CP014602 (Leuconostoc mesenteroides subsp. mesenteroides strain DRC0211 plasmid pDSK2, complete sequence) position: , mismatch: 11, identity: 0.711

agagtggtttaagaaaataagttatttttcaaaacata	CRISPR spacer
ttatctcctcaagaaattaagttatttttaaaaacatt	Protospacer
  * .  .*.****** ************ ******* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 202435 : 245444 35 Geobacillus_virus(14.29%) transposase,protease NA
DBSCAN-SWA_2 258863 : 318754 97 Clostridium_phage(85.88%) terminase,portal,capsid,tail,integrase,head attL 263440:263457|attR 285258:285275
DBSCAN-SWA_3 337382 : 353558 14 Synechococcus_phage(23.08%) NA NA
DBSCAN-SWA_4 509069 : 522067 13 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_5 584788 : 602191 16 Streptococcus_phage(91.67%) NA NA
DBSCAN-SWA_6 804452 : 863758 52 Clostridium_phage(41.67%) transposase,integrase,protease,coat attL 862611:862645|attR 870343:870377
DBSCAN-SWA_7 1283266 : 1335037 87 Clostridium_phage(88.75%) portal,tail,integrase,head attL 1285555:1285571|attR 1305997:1306013
DBSCAN-SWA_8 1524113 : 1533788 11 Geobacillus_virus(16.67%) transposase NA
DBSCAN-SWA_9 1588110 : 1612426 29 Clostridium_phage(54.55%) tail NA
DBSCAN-SWA_10 1691380 : 1701109 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_11 2149158 : 2156889 9 Clostridium_phage(42.86%) transposase NA
DBSCAN-SWA_12 2642971 : 2650617 9 Bacillus_phage(50.0%) integrase attL 2637850:2637863|attR 2653259:2653272
DBSCAN-SWA_13 3092762 : 3147002 78 Clostridium_phage(63.08%) terminase,portal,tail,integrase,plate attL 3087565:3087582|attR 3153092:3153109
DBSCAN-SWA_14 3248634 : 3257587 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_15 3815248 : 3880464 67 Clostridium_phage(54.84%) tail,integrase,plate,protease attL 3829496:3829514|attR 3839054:3839072
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP020380.1|AXU34642.1|1287285_1287597_-|Ribbon-helix-helix-protein,-copG-family 1287285_1287597_- 103 aa aa NA NA NA 1283266-1335037 yes