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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP019858 Clostridioides difficile strain DSM 29688 chromosome, complete genome 13 crisprs csa3,RT,WYL,cas3,DEDDh,DinG,cas14j,cas14k,c2c9_V-U4,cas5,cas7,cas6 5 54 12 0

Results visualization

1. CP019858
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_1 17715-17804 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_2 141435-141513 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_3 148857-148946 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_4 1341923-1342349 Orphan I-A
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_5 1545884-1546371 Orphan I-A
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_6 1662655-1663413 Orphan I-A
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_7 1752938-1753493 Orphan I-A
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_8 1754095-1754977 Orphan NA:I-A
13 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_9 1906075-1907814 Orphan I-A
26 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_10 2263566-2263792 Orphan I-A
3 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_11 2605062-2605354 TypeV-U4 NA:I-A
4 spacers
c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_12 2770811-2770968 Unclear NA
2 spacers
cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP019858_13 2853197-2853753 Orphan I-A
8 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 31977-32010 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 125978-126011 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 395387-395420 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 1094769-1094802 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 3097088-3097121 0 1.0
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 31977-32010 0 1.0
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 125978-126011 0 1.0
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 395387-395420 0 1.0
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 1094769-1094802 0 1.0
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 3097088-3097121 0 1.0
CP019858_19 19.3|3706212|22|CP019858|CRT 3706212-3706233 22 CP019858.1 3706023-3706044 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 CP019858.1 4077635-4077668 1 0.971
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 CP019858.1 4077635-4077668 1 0.971
CP019858_19 19.3|3706212|22|CP019858|CRT 3706212-3706233 22 CP019858.1 3705978-3705999 1 0.955
CP019858_19 19.3|3706212|22|CP019858|CRT 3706212-3706233 22 CP019858.1 3705465-3705486 2 0.909
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 CP019858.1 3705627-3705651 2 0.92
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 CP019858.1 3705816-3705840 2 0.92
CP019858_20 20.6|3872511|25|CP019858|CRT 3872511-3872535 25 CP019858.1 3705591-3705615 2 0.92

1. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 31977-32010, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

2. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 125978-126011, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 395387-395420, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 1094769-1094802, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 3097088-3097121, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

6. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 31977-32010, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

7. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 125978-126011, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

8. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 395387-395420, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

9. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 1094769-1094802, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

10. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 3097088-3097121, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

11. spacer 19.3|3706212|22|CP019858|CRT matches to position: 3706023-3706044, mismatch: 0, identity: 1.0

tgttattccatttgctccggtt	CRISPR spacer
tgttattccatttgctccggtt	Protospacer
**********************

12. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to position: 4077635-4077668, mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgtatgtgaagtttgtttgttggcgc	Protospacer
**********.***********************

13. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to position: 4077635-4077668, mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgtatgtgaagtttgtttgttggcgc	Protospacer
**********.***********************

14. spacer 19.3|3706212|22|CP019858|CRT matches to position: 3705978-3705999, mismatch: 1, identity: 0.955

tgttattccatttgctccggtt	CRISPR spacer
tgttactccatttgctccggtt	Protospacer
*****.****************

15. spacer 19.3|3706212|22|CP019858|CRT matches to position: 3705465-3705486, mismatch: 2, identity: 0.909

tgttattccatttgctccggtt	CRISPR spacer
tgctactccatttgctccggtt	Protospacer
**.**.****************

16. spacer 20.2|3872322|25|CP019858|CRT matches to position: 3705627-3705651, mismatch: 2, identity: 0.92

tgttgctccatctgctcctgttgga	CRISPR spacer
tgttgctcctactgctcctgttgga	Protospacer
*********  **************

17. spacer 20.2|3872322|25|CP019858|CRT matches to position: 3705816-3705840, mismatch: 2, identity: 0.92

tgttgctccatctgctcctgttgga	CRISPR spacer
tgttgctcctactgctcctgttgga	Protospacer
*********  **************

18. spacer 20.6|3872511|25|CP019858|CRT matches to position: 3705591-3705615, mismatch: 2, identity: 0.92

tgttggacctgctactccatctgct	CRISPR spacer
tgttggacctactgctccatctgct	Protospacer
**********.**.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP019858_2 2.1|141460|29|CP019858|CRISPRCasFinder 141460-141488 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
CP019858_4 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342150-1342187 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 460-497 0 1.0
CP019858_4 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342150-1342187 38 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 43697-43734 0 1.0
CP019858_4 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342150-1342187 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 121503-121540 0 1.0
CP019858_4 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342150-1342187 38 LN681537 Clostridium phage phiCD211, complete genome 130365-130402 0 1.0
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 31024-31059 0 1.0
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 25068-25103 0 1.0
CP019858_7 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753360-1753396 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 20734-20770 0 1.0
CP019858_7 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753360-1753396 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 19379-19415 0 1.0
CP019858_7 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753360-1753396 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 16056-16092 0 1.0
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 JX145342 Clostridium phage phiMMP04, complete genome 30188-30224 0 1.0
CP019858_9 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906830-1906865 36 KU057941 Clostridium phage CDSH1, complete genome 19460-19495 0 1.0
CP019858_9 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906830-1906865 36 HM568888 Clostridium phage phiCD38-2, complete genome 18956-18991 0 1.0
CP019858_9 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906830-1906865 36 NC_028958 Clostridium phage phiCD146, complete genome 18965-19000 0 1.0
CP019858_9 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906830-1906865 36 LN881738 Escherichia phage slur17, complete genome 942-977 0 1.0
CP019858_9 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906960-1906994 35 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 1125-1159 0 1.0
CP019858_9 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906960-1906994 35 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 120841-120875 0 1.0
CP019858_9 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906960-1906994 35 LN681537 Clostridium phage phiCD211, complete genome 129703-129737 0 1.0
CP019858_9 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907155-1907191 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 40679-40715 0 1.0
CP019858_9 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907155-1907191 37 MF547662 Clostridioides phage LIBA6276, complete genome 120839-120875 0 1.0
CP019858_9 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907155-1907191 37 MF547663 Clostridioides phage LIBA2945, complete genome 119102-119138 0 1.0
CP019858_9 9.21|1907417|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907417-1907452 36 MF547662 Clostridioides phage LIBA6276, complete genome 114876-114911 0 1.0
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 10298-10333 0 1.0
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 37326-37361 0 1.0
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 31370-31405 0 1.0
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 8943-8978 0 1.0
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 5620-5655 0 1.0
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 10297-10333 0 1.0
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 8942-8978 0 1.0
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 5619-5655 0 1.0
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 37326-37362 0 1.0
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 31370-31406 0 1.0
CP019858_1 1.1|17743|34|CP019858|CRISPRCasFinder 17743-17776 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP019858_3 3.1|148885|34|CP019858|CRISPRCasFinder 148885-148918 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP019858_4 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342217-1342252 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 14592-14627 1 0.972
CP019858_4 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342217-1342252 36 NC_007917 Clostridium phage phi CD119, complete genome 14592-14627 1 0.972
CP019858_4 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342217-1342252 36 NC_028996 Clostridium phage phiCDHM19, complete genome 14837-14872 1 0.972
CP019858_4 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342282-1342320 39 KU057941 Clostridium phage CDSH1, complete genome 38731-38769 1 0.974
CP019858_4 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342282-1342320 39 LN881738 Escherichia phage slur17, complete genome 23287-23325 1 0.974
CP019858_4 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342282-1342320 39 NC_028905 Clostridium phage phiCD111, complete genome 38702-38740 1 0.974
CP019858_4 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342282-1342320 39 HM568888 Clostridium phage phiCD38-2, complete genome 38229-38267 1 0.974
CP019858_4 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342282-1342320 39 NC_028958 Clostridium phage phiCD146, complete genome 38382-38420 1 0.974
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 16597-16632 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 15242-15277 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 11919-11954 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 NC_048665 Clostridium phage phiCDHM14, complete genome 15279-15314 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 MK473382 Clostridium phage JD032, complete genome 19395-19430 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 HG796225 Clostridium phage phiCDHM13 complete genome 15247-15282 1 0.972
CP019858_5 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1546110-1546145 36 HG798901 Clostridium phage phiCDHM11 complete genome 15246-15281 1 0.972
CP019858_7 7.2|1753033|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753033-1753068 36 GU949551 Clostridium phage phiCD6356, complete genome 19252-19287 1 0.972
CP019858_7 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753227-1753263 37 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 58945-58981 1 0.973
CP019858_9 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906830-1906865 36 NC_028905 Clostridium phage phiCD111, complete genome 19430-19465 1 0.972
CP019858_9 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906960-1906994 35 MF547662 Clostridioides phage LIBA6276, complete genome 122117-122151 1 0.971
CP019858_9 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906960-1906994 35 MF547663 Clostridioides phage LIBA2945, complete genome 120380-120414 1 0.971
CP019858_9 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907024-1907060 37 NC_008226 Clostridioides difficile 630 plasmid pCD630, complete sequence 2553-2589 1 0.973
CP019858_9 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907024-1907060 37 NZ_CP016319 Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence 5455-5491 1 0.973
CP019858_9 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907024-1907060 37 NZ_MG266000 Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence 2559-2595 1 0.973
CP019858_9 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907221-1907256 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 30780-30815 1 0.972
CP019858_9 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907221-1907256 36 NC_007917 Clostridium phage phi CD119, complete genome 30780-30815 1 0.972
CP019858_9 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907221-1907256 36 NC_028996 Clostridium phage phiCDHM19, complete genome 34456-34491 1 0.972
CP019858_19 19.1|3706113|22|CP019858|CRT 3706113-3706134 22 MG592614 Vibrio phage 1.248.O._10N.261.54.F1, partial genome 11996-12017 1 0.955
CP019858_4 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342018-1342055 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 30892-30929 2 0.947
CP019858_4 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342018-1342055 38 NC_007917 Clostridium phage phi CD119, complete genome 30892-30929 2 0.947
CP019858_4 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342018-1342055 38 NC_028996 Clostridium phage phiCDHM19, complete genome 34568-34605 2 0.947
CP019858_7 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753227-1753263 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 84907-84943 2 0.946
CP019858_8 8.3|1754254|38|CP019858|PILER-CR,CRT 1754254-1754291 38 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 22353-22390 2 0.947
CP019858_8 8.3|1754254|38|CP019858|PILER-CR,CRT 1754254-1754291 38 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 16397-16434 2 0.947
CP019858_8 8.3|1754254|38|CP019858|PILER-CR,CRT 1754254-1754291 38 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 24392-24429 2 0.947
CP019858_8 8.3|1754254|38|CP019858|PILER-CR,CRT 1754254-1754291 38 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 23037-23074 2 0.947
CP019858_8 8.3|1754254|38|CP019858|PILER-CR,CRT 1754254-1754291 38 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 19714-19751 2 0.947
CP019858_8 8.8|1754255|37|CP019858|CRISPRCasFinder 1754255-1754291 37 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 22353-22389 2 0.946
CP019858_8 8.8|1754255|37|CP019858|CRISPRCasFinder 1754255-1754291 37 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 16397-16433 2 0.946
CP019858_8 8.8|1754255|37|CP019858|CRISPRCasFinder 1754255-1754291 37 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 24393-24429 2 0.946
CP019858_8 8.8|1754255|37|CP019858|CRISPRCasFinder 1754255-1754291 37 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 23038-23074 2 0.946
CP019858_8 8.8|1754255|37|CP019858|CRISPRCasFinder 1754255-1754291 37 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 19715-19751 2 0.946
CP019858_8 8.17|1754847|37|CP019858|CRISPRCasFinder 1754847-1754883 37 GU949551 Clostridium phage phiCD6356, complete genome 9965-10001 2 0.946
CP019858_8 8.18|1754913|36|CP019858|CRISPRCasFinder 1754913-1754948 36 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22167 2 0.944
CP019858_8 8.26|1754912|37|CP019858|CRT 1754912-1754948 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22168 2 0.946
CP019858_8 8.28|1754857|36|CP019858|PILER-CR 1754857-1754892 36 GU949551 Clostridium phage phiCD6356, complete genome 9966-10001 2 0.944
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 NC_048665 Clostridium phage phiCDHM14, complete genome 31212-31248 2 0.946
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 NC_028838 Clostridium phage phiCD506, complete genome 32299-32335 2 0.946
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 HG796225 Clostridium phage phiCDHM13 complete genome 32162-32198 2 0.946
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 LN681538 Clostridium phage phiCD481-1, complete genome 31893-31929 2 0.946
CP019858_9 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1906764-1906800 37 MK473382 Clostridium phage JD032, complete genome 1046-1082 2 0.946
CP019858_9 9.16|1907090|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907090-1907125 36 MF547662 Clostridioides phage LIBA6276, complete genome 123179-123214 2 0.944
CP019858_9 9.16|1907090|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907090-1907125 36 MF547663 Clostridioides phage LIBA2945, complete genome 121442-121477 2 0.944
CP019858_10 10.1|2263596|36|CP019858|PILER-CR,CRT 2263596-2263631 36 KX905163 Clostridioides phage phiSemix9P1, complete genome 12040-12075 2 0.944
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22166 2 0.943
CP019858_11 11.5|2605092|36|CP019858|CRISPRCasFinder 2605092-2605127 36 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22167 2 0.944
CP019858_19 19.1|3706113|22|CP019858|CRT 3706113-3706134 22 MG592608 Vibrio phage 1.243.O._10N.261.54.B5, partial genome 11275-11296 2 0.909
CP019858_20 20.3|3872367|34|CP019858|CRT 3872367-3872400 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 130617-130650 2 0.941
CP019858_20 20.3|3872367|34|CP019858|CRT 3872367-3872400 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 130644-130677 2 0.941
CP019858_20 20.5|3872466|25|CP019858|CRT 3872466-3872490 25 MN694345 Marine virus AFVG_250M178, complete genome 24243-24267 2 0.92
CP019858_20 20.5|3872466|25|CP019858|CRT 3872466-3872490 25 MN694528 Marine virus AFVG_250M165, complete genome 24363-24387 2 0.92
CP019858_20 20.13|3872913|22|CP019858|CRT 3872913-3872934 22 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 173292-173313 2 0.909
CP019858_6 6.8|1663146|39|CP019858|PILER-CR,CRISPRCasFinder,CRT 1663146-1663184 39 JX145342 Clostridium phage phiMMP04, complete genome 16665-16703 3 0.923
CP019858_6 6.11|1663347|38|CP019858|CRISPRCasFinder,CRT 1663347-1663384 38 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 94861-94898 3 0.921
CP019858_8 8.25|1754846|38|CP019858|CRT 1754846-1754883 38 GU949551 Clostridium phage phiCD6356, complete genome 9965-10002 3 0.921
CP019858_10 10.4|2263596|37|CP019858|CRISPRCasFinder 2263596-2263632 37 KX905163 Clostridioides phage phiSemix9P1, complete genome 12039-12075 3 0.919
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 MH319749 Marine virus AG-345-F15 Ga0172271_11 genomic sequence 126034-126058 3 0.88
CP019858_20 20.5|3872466|25|CP019858|CRT 3872466-3872490 25 NZ_CP019876 Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence 77181-77205 3 0.88
CP019858_20 20.11|3872796|25|CP019858|CRT 3872796-3872820 25 MN694311 Marine virus AFVG_250M573, complete genome 10982-11006 3 0.88
CP019858_20 20.14|3872955|22|CP019858|CRT 3872955-3872976 22 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 132552-132573 3 0.864
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NC_015057 Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence 28064-28088 3 0.88
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 236394-236424 3 0.903
CP019858_18 18.3|3245528|25|CP019858|CRISPRCasFinder 3245528-3245552 25 MN694568 Marine virus AFVG_250M879, complete genome 12134-12158 4 0.84
CP019858_18 18.3|3245528|25|CP019858|CRISPRCasFinder 3245528-3245552 25 HQ634174 Cyanophage MED4-213, complete genome 98055-98079 4 0.84
CP019858_18 18.3|3245528|25|CP019858|CRISPRCasFinder 3245528-3245552 25 GU071101 Prochlorococcus phage P-HM1, complete genome 15695-15719 4 0.84
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 NZ_CP019876 Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence 77181-77205 4 0.84
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 MN693962 Marine virus AFVG_250M1136, complete genome 32170-32194 4 0.84
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 MH576968 Streptomyces phage Wofford, complete genome 46948-46972 4 0.84
CP019858_20 20.2|3872322|25|CP019858|CRT 3872322-3872346 25 MN693918 Marine virus AFVG_250M1135, complete genome 32187-32211 4 0.84
CP019858_20 20.6|3872511|25|CP019858|CRT 3872511-3872535 25 NC_023007 Bacillus phage vB_BanS-Tsamsa, complete genome 113249-113273 4 0.84
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 AP013524 Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7-MedDCM-OCT-S39-C15 37332-37356 4 0.84
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NZ_CP019365 Borrelia turicatae 91E135 isolate Oz1 plasmid lpE43, complete sequence 21755-21779 4 0.84
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NZ_CP019368 Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence 24104-24128 4 0.84
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NZ_CP019369 Borrelia turicatae 91E135 isolate Oz1 plasmid lpU43, complete sequence 11043-11067 4 0.84
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 MK113950 Phage 5P_2, complete genome 71225-71249 4 0.84
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 234929-234959 4 0.871
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 LN681539 Clostridium phage phiCD505, complete genome 40165-40202 5 0.868
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_LR135332 Enterococcus faecium isolate E7471 plasmid 2 80868-80894 5 0.815
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_LR135332 Enterococcus faecium isolate E7471 plasmid 2 81655-81681 5 0.815
CP019858_12 12.2|2770904|38|CP019858|PILER-CR 2770904-2770941 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 2361-2398 5 0.868
CP019858_12 12.2|2770904|38|CP019858|PILER-CR 2770904-2770941 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 119602-119639 5 0.868
CP019858_12 12.2|2770904|38|CP019858|PILER-CR 2770904-2770941 38 LN681537 Clostridium phage phiCD211, complete genome 128464-128501 5 0.868
CP019858_20 20.5|3872466|25|CP019858|CRT 3872466-3872490 25 CP053324 Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence 21648-21672 5 0.8
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 397-421 5 0.8
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321752-321776 5 0.8
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 68869-68902 5 0.853
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 68932-68965 5 0.853
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 173145-173178 5 0.853
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 MN694423 Marine virus AFVG_250M1001, complete genome 26193-26226 5 0.853
CP019858_2 2.1|141460|29|CP019858|CRISPRCasFinder 141460-141488 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP014152 Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence 22889-22924 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP013710 Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence 11677-11712 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NC_010379 Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence 66233-66268 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NC_010418 Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence 186556-186591 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NC_012654 Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence 143377-143412 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP006909 Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence 98239-98274 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NC_025146 Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111 220042-220077 6 0.833
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP031095 Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence 238771-238806 6 0.833
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_CP035656 Enterococcus faecium strain UAMSEF_09 plasmid unnamed2 80869-80895 6 0.778
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_CP012462 Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2 76258-76284 6 0.778
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_CP012462 Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2 77043-77069 6 0.778
CP019858_8 8.27|1754791|27|CP019858|PILER-CR 1754791-1754817 27 NZ_CP035662 Enterococcus faecium strain UAMSEF_20 plasmid unnamed2 381-407 6 0.778
CP019858_19 19.2|3706158|31|CP019858|CRT 3706158-3706188 31 MN693124 Marine virus AFVG_25M44, complete genome 16498-16528 6 0.806
CP019858_20 20.15|3872997|25|CP019858|CRT 3872997-3873021 25 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 132558-132582 6 0.76
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 MG869618 Polaromonas sp. E5S plasmid pE5SP1, complete sequence 53570-53600 7 0.774
CP019858_19 19.2|3706158|31|CP019858|CRT 3706158-3706188 31 NC_021536 Synechococcus phage S-IOM18 genomic sequence 42082-42112 7 0.774
CP019858_20 20.3|3872367|34|CP019858|CRT 3872367-3872400 34 NZ_CP047963 Aeromonas media strain MC64 plasmid pMC64A, complete sequence 193736-193769 7 0.794
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 MG945433 UNVERIFIED: Microviridae sp. isolate 4854-1711, complete genome 5255-5288 7 0.794
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NC_015057 Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence 28064-28097 7 0.794
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 MG945309 UNVERIFIED: Microviridae sp. isolate 786-1711, complete genome 5351-5384 7 0.794
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 MH412654 Synechococcus phage S-T4, complete genome 67923-67956 7 0.794
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 HQ633071 Synechococcus phage S-SKS1 genomic sequence 55383-55416 7 0.794
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 240581-240611 7 0.774
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 253686-253716 7 0.774
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024691 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-7-9K, complete sequence 85-115 7 0.774
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 161173-161203 7 0.774
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 130599-130632 7 0.794
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 131070-131103 7 0.794
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 AP013524 Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7-MedDCM-OCT-S39-C15 37341-37374 7 0.794
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 MN693798 Marine virus AFVG_250M119, complete genome 11466-11499 7 0.794
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 KF437907 Phormidium phage MIS-PhV1A, complete genome 8752-8785 7 0.794
CP019858_9 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907221-1907256 36 NZ_CP044536 Borrelia sp. CA690 plasmid lp54, complete sequence 20740-20775 8 0.778
CP019858_9 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907221-1907256 36 NZ_CP044536 Borrelia sp. CA690 plasmid lp54, complete sequence 5759-5794 8 0.778
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 444883-444913 8 0.742
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP026091 Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence 697188-697221 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP026093 Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence 697238-697271 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 352923-352956 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 697039-697072 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 697017-697050 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 1491249-1491282 8 0.765
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 1476804-1476837 8 0.765
CP019858_20 20.18|3873138|34|CP019858|CRT 3873138-3873171 34 MN693652 Marine virus AFVG_250M189, complete genome 20788-20821 8 0.765
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 243084-243114 8 0.742
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 169173-169203 8 0.742
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 NC_010180 Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence 116631-116661 8 0.742
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 1002-1032 8 0.742
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 NZ_CP028885 Borrelia turcica IST7 plasmid lp129, complete sequence 114769-114799 8 0.742
CP019858_20 20.21|3873348|31|CP019858|CRT 3873348-3873378 31 MT375529 Pelagibacter phage Kolga EXVC01, complete genome 13768-13798 8 0.742
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 90273-90306 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 361-394 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 136-169 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 235-268 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 325-358 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321779-321812 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321815-321848 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321878-321911 8 0.765
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 1017-1050 8 0.765
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024317 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp72, complete sequence 19443-19478 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024206 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp72, complete sequence 19448-19483 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024352 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp72, complete sequence 19459-19494 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP021873 Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence 20983-21018 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024372 Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp72, complete sequence 19437-19472 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024391 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp72, complete sequence 54072-54107 9 0.75
CP019858_4 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1342085-1342120 36 NZ_CP024334 Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp72, complete sequence 52931-52966 9 0.75
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47034-47068 9 0.743
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 NZ_MK748464 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence 24257-24287 9 0.71
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 NZ_MK748465 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence 24334-24364 9 0.71
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 NZ_MK748462 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence 24337-24367 9 0.71
CP019858_18 18.1|3245393|31|CP019858|CRISPRCasFinder 3245393-3245423 31 NZ_MK748463 Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence 24326-24356 9 0.71
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 NZ_CP034351 Streptomyces sp. W1SF4 plasmid p1, complete sequence 52195-52228 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 73876-73909 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 71344-71377 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 406-439 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 163-196 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 190-223 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 262-295 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 289-322 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321734-321767 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321851-321884 9 0.735
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 101528-101561 9 0.735
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 NZ_CP009639 Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence 72001-72038 10 0.737
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 NZ_CP053963 Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence 113574-113611 10 0.737
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 NZ_CP047143 Lactobacillus sp. C25 plasmid unnamed, complete sequence 158818-158855 10 0.737
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 NZ_CP049229 Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence 9438-9475 10 0.737
CP019858_7 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753293-1753330 38 NZ_CP049229 Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence 18472-18509 10 0.737
CP019858_8 8.18|1754913|36|CP019858|CRISPRCasFinder 1754913-1754948 36 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47033-47068 10 0.722
CP019858_9 9.19|1907286|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907286-1907321 36 AP013411 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43 10531-10566 10 0.722
CP019858_9 9.19|1907286|36|CP019858|PILER-CR,CRISPRCasFinder,CRT 1907286-1907321 36 AP013669 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS *** 22943-22978 10 0.722
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 NC_022783 Bacillus toyonensis BCT-7112 plasmid pBCT8, complete sequence 481-515 10 0.714
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 NC_019526 Enterobacteria phage vB_KleM-RaK2, complete genome 17188-17222 10 0.714
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 MT708547 Klebsiella phage Muenster, complete genome 139287-139321 10 0.714
CP019858_11 11.1|2605092|35|CP019858|PILER-CR,CRT 2605092-2605126 35 AB897757 Klebsiella phage K64-1 DNA, complete genome 17165-17199 10 0.714
CP019858_11 11.5|2605092|36|CP019858|CRISPRCasFinder 2605092-2605127 36 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47033-47068 10 0.722
CP019858_19 19.7|3706401|40|CP019858|CRT 3706401-3706440 40 MH884511 Exiguobacterium phage vB_EalM-132, complete genome 75164-75203 10 0.75
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 MN176227 Bacillus phage 049ML001, complete genome 7476-7509 10 0.706
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 X89721 Bacteriophage SPP1 head morphogenesis genes 7 to 15 4435-4468 10 0.706
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 MN176228 Bacillus phage 049ML003, complete genome 7404-7437 10 0.706
CP019858_20 20.16|3873042|34|CP019858|CRT 3873042-3873075 34 X97918 Bacteriophage SPP1 complete nucleotide sequence 7659-7692 10 0.706
CP019858_20 20.18|3873138|34|CP019858|CRT 3873138-3873171 34 NZ_CP020744 Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence 49881-49914 10 0.706
CP019858_20 20.18|3873138|34|CP019858|CRT 3873138-3873171 34 NZ_CP020744 Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence 49989-50022 10 0.706
CP019858_20 20.18|3873138|34|CP019858|CRT 3873138-3873171 34 NZ_CP020744 Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence 50025-50058 10 0.706
CP019858_20 20.18|3873138|34|CP019858|CRT 3873138-3873171 34 MT219824 Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence 246949-246982 10 0.706
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP053689 Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence 173136-173169 10 0.706
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP019365 Borrelia turicatae 91E135 isolate Oz1 plasmid lpE43, complete sequence 21746-21779 10 0.706
CP019858_20 20.22|3873399|34|CP019858|CRT 3873399-3873432 34 NZ_CP019368 Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence 24095-24128 10 0.706
CP019858_7 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT 1753227-1753263 37 NZ_CP047444 Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-7 22427-22463 11 0.703
CP019858_8 8.26|1754912|37|CP019858|CRT 1754912-1754948 37 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47032-47068 11 0.703

1. spacer 2.1|141460|29|CP019858|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatctttaaaattaaatataaaaataagctagacat	CRISPR spacer
ttaatctttaaaattaaatataaaaataagctagacat	Protospacer
**************************************

3. spacer 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatctttaaaattaaatataaaaataagctagacat	CRISPR spacer
ttaatctttaaaattaaatataaaaataagctagacat	Protospacer
**************************************

4. spacer 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

ttaatctttaaaattaaatataaaaataagctagacat	CRISPR spacer
ttaatctttaaaattaaatataaaaataagctagacat	Protospacer
**************************************

5. spacer 4.4|1342150|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

ttaatctttaaaattaaatataaaaataagctagacat	CRISPR spacer
ttaatctttaaaattaaatataaaaataagctagacat	Protospacer
**************************************

6. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagtcttttggataactacccaattaggattt	Protospacer
************************************

7. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagtcttttggataactacccaattaggattt	Protospacer
************************************

8. spacer 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttatcattgtgtaatgctctttagtaatagaaccta	CRISPR spacer
tttatcattgtgtaatgctctttagtaatagaaccta	Protospacer
*************************************

9. spacer 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

tttatcattgtgtaatgctctttagtaatagaaccta	CRISPR spacer
tttatcattgtgtaatgctctttagtaatagaaccta	Protospacer
*************************************

10. spacer 7.7|1753360|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tttatcattgtgtaatgctctttagtaatagaaccta	CRISPR spacer
tttatcattgtgtaatgctctttagtaatagaaccta	Protospacer
*************************************

11. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
cacattggcgttgaagctgttagcaaagcattaaaag	Protospacer
*************************************

12. spacer 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gtagcctattgtttggcttcctgacatttcgtaaga	CRISPR spacer
gtagcctattgtttggcttcctgacatttcgtaaga	Protospacer
************************************

13. spacer 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gtagcctattgtttggcttcctgacatttcgtaaga	CRISPR spacer
gtagcctattgtttggcttcctgacatttcgtaaga	Protospacer
************************************

14. spacer 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

gtagcctattgtttggcttcctgacatttcgtaaga	CRISPR spacer
gtagcctattgtttggcttcctgacatttcgtaaga	Protospacer
************************************

15. spacer 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gtagcctattgtttggcttcctgacatttcgtaaga	CRISPR spacer
gtagcctattgtttggcttcctgacatttcgtaaga	Protospacer
************************************

16. spacer 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaaatggtgtgaatggtgaaaggcacacaacac	CRISPR spacer
tttaaatggtgtgaatggtgaaaggcacacaacac	Protospacer
***********************************

17. spacer 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

tttaaatggtgtgaatggtgaaaggcacacaacac	CRISPR spacer
tttaaatggtgtgaatggtgaaaggcacacaacac	Protospacer
***********************************

18. spacer 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

tttaaatggtgtgaatggtgaaaggcacacaacac	CRISPR spacer
tttaaatggtgtgaatggtgaaaggcacacaacac	Protospacer
***********************************

19. spacer 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atgtaaagtttagcaaattcaatagtatccatattgt	CRISPR spacer
atgtaaagtttagcaaattcaatagtatccatattgt	Protospacer
*************************************

20. spacer 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

atgtaaagtttagcaaattcaatagtatccatattgt	CRISPR spacer
atgtaaagtttagcaaattcaatagtatccatattgt	Protospacer
*************************************

21. spacer 9.17|1907155|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

atgtaaagtttagcaaattcaatagtatccatattgt	CRISPR spacer
atgtaaagtttagcaaattcaatagtatccatattgt	Protospacer
*************************************

22. spacer 9.21|1907417|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

agtgaatgtgaccaattttgtgacgaattatcagag	CRISPR spacer
agtgaatgtgaccaattttgtgacgaattatcagag	Protospacer
************************************

23. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctatag	Protospacer
************************************

24. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctatag	Protospacer
************************************

25. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctatag	Protospacer
************************************

26. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctatag	Protospacer
************************************

27. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctatag	Protospacer
************************************

28. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctataga	Protospacer
*************************************

29. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctataga	Protospacer
*************************************

30. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctataga	Protospacer
*************************************

31. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctataga	Protospacer
*************************************

32. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccgccaacaacaccagctattgcaattcctataga	Protospacer
*************************************

33. spacer 1.1|17743|34|CP019858|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

34. spacer 3.1|148885|34|CP019858|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

35. spacer 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

ttaataaaactgatagtaaaactactaataataaag	CRISPR spacer
ttaataaaactgatagtaaaactacaaataataaag	Protospacer
************************* **********

36. spacer 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

ttaataaaactgatagtaaaactactaataataaag	CRISPR spacer
ttaataaaactgatagtaaaactacaaataataaag	Protospacer
************************* **********

37. spacer 4.5|1342217|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.972

ttaataaaactgatagtaaaactactaataataaag	CRISPR spacer
ttaataaaactgatagtaaaactacaaataataaag	Protospacer
************************* **********

38. spacer 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

acttttaaaaattatttagcgttatattgctgcataaaa	CRISPR spacer
acttttaaaaattatttagcgttatattgttgcataaaa	Protospacer
*****************************.*********

39. spacer 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

acttttaaaaattatttagcgttatattgctgcataaaa	CRISPR spacer
acttttaaaaattatttagcgttatattgttgcataaaa	Protospacer
*****************************.*********

40. spacer 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

acttttaaaaattatttagcgttatattgctgcataaaa	CRISPR spacer
acttttaaaaattatttagcgttatattgttgcataaaa	Protospacer
*****************************.*********

41. spacer 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

acttttaaaaattatttagcgttatattgctgcataaaa	CRISPR spacer
acttttaaaaattatttagcgttatattgttgcataaaa	Protospacer
*****************************.*********

42. spacer 4.6|1342282|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.974

acttttaaaaattatttagcgttatattgctgcataaaa	CRISPR spacer
acttttaaaaattatttagcgttatattgttgcataaaa	Protospacer
*****************************.*********

43. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

44. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

45. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

46. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

47. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagtcttttggataactacccaattaggtttt	Protospacer
******************************** ***

48. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

49. spacer 5.4|1546110|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.972

gttatagtcttttggataactacccaattaggattt	CRISPR spacer
gttatagttttttggataactacccaattaggattt	Protospacer
********.***************************

50. spacer 7.2|1753033|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

aacatagtaatatatgaccagacaggtagaataatc	CRISPR spacer
aacagagtaatatatgaccagacaggtagaataatc	Protospacer
**** *******************************

51. spacer 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 1, identity: 0.973

gactttgaagaaaataatttagttatatcttgggaag	CRISPR spacer
gattttgaagaaaataatttagttatatcttgggaag	Protospacer
**.**********************************

52. spacer 9.12|1906830|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.972

gtagcctattgtttggcttcctgacatttcgtaaga	CRISPR spacer
gtagcctattgtctggcttcctgacatttcgtaaga	Protospacer
************.***********************

53. spacer 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.971

tttaaatggtgtgaatggtgaaaggcacacaacac	CRISPR spacer
ttttaatggtgtgaatggtgaaaggcacacaacac	Protospacer
*** *******************************

54. spacer 9.14|1906960|35|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.971

tttaaatggtgtgaatggtgaaaggcacacaacac	CRISPR spacer
ttttaatggtgtgaatggtgaaaggcacacaacac	Protospacer
*** *******************************

55. spacer 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 1, identity: 0.973

cttcctgtaggtgctaccattaatacatttttaccct	CRISPR spacer
cttcctgtaggtgctaccattaatacattttcaccct	Protospacer
*******************************.*****

56. spacer 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 1, identity: 0.973

cttcctgtaggtgctaccattaatacatttttaccct	CRISPR spacer
cttcctgtaggtgctaccattaatacattttcaccct	Protospacer
*******************************.*****

57. spacer 9.15|1907024|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 1, identity: 0.973

cttcctgtaggtgctaccattaatacatttttaccct	CRISPR spacer
cttcctgtaggtgctaccattaatacattttcaccct	Protospacer
*******************************.*****

58. spacer 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

tggacacaacaaaaatttttcaaaccttttaaaaga	CRISPR spacer
tggacacaacaaaaatttttcaaaccttttaaaaaa	Protospacer
**********************************.*

59. spacer 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

tggacacaacaaaaatttttcaaaccttttaaaaga	CRISPR spacer
tggacacaacaaaaatttttcaaaccttttaaaaaa	Protospacer
**********************************.*

60. spacer 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.972

tggacacaacaaaaatttttcaaaccttttaaaaga	CRISPR spacer
tggacacaacaaaaatttttcaaaccttttaaaaaa	Protospacer
**********************************.*

61. spacer 19.1|3706113|22|CP019858|CRT matches to MG592614 (Vibrio phage 1.248.O._10N.261.54.F1, partial genome) position: , mismatch: 1, identity: 0.955

tgttattccatttgctccagtc	CRISPR spacer
tgatattccatttgctccagtc	Protospacer
** *******************

62. spacer 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.947

gcagagttgatagtactattaaaagaagaaaagttaag	CRISPR spacer
acggagttgatagtactattaaaagaagaaaagttaag	Protospacer
.*.***********************************

63. spacer 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.947

gcagagttgatagtactattaaaagaagaaaagttaag	CRISPR spacer
acggagttgatagtactattaaaagaagaaaagttaag	Protospacer
.*.***********************************

64. spacer 4.2|1342018|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.947

gcagagttgatagtactattaaaagaagaaaagttaag	CRISPR spacer
acggagttgatagtactattaaaagaagaaaagttaag	Protospacer
.*.***********************************

65. spacer 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.946

gactttgaagaaaataatttagttatatcttgggaag	CRISPR spacer
gactttgaagaaaataatttagtcatatcctgggaag	Protospacer
***********************.*****.*******

66. spacer 8.3|1754254|38|CP019858|PILER-CR,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.947

tttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
tttgaaacttactacaccagttttagtagttccagcta	Protospacer
***.*** ******************************

67. spacer 8.3|1754254|38|CP019858|PILER-CR,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

tttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
tttgaaacttactacaccagttttagtagttccagcta	Protospacer
***.*** ******************************

68. spacer 8.3|1754254|38|CP019858|PILER-CR,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.947

tttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
tttgaaacttactacaccagttttagtagttccagcta	Protospacer
***.*** ******************************

69. spacer 8.3|1754254|38|CP019858|PILER-CR,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.947

tttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
tttgaaacttactacaccagttttagtagttccagcta	Protospacer
***.*** ******************************

70. spacer 8.3|1754254|38|CP019858|PILER-CR,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.947

tttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
tttgaaacttactacaccagttttagtagttccagcta	Protospacer
***.*** ******************************

71. spacer 8.8|1754255|37|CP019858|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.946

ttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
ttgaaacttactacaccagttttagtagttccagcta	Protospacer
**.*** ******************************

72. spacer 8.8|1754255|37|CP019858|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

ttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
ttgaaacttactacaccagttttagtagttccagcta	Protospacer
**.*** ******************************

73. spacer 8.8|1754255|37|CP019858|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

ttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
ttgaaacttactacaccagttttagtagttccagcta	Protospacer
**.*** ******************************

74. spacer 8.8|1754255|37|CP019858|CRISPRCasFinder matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 2, identity: 0.946

ttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
ttgaaacttactacaccagttttagtagttccagcta	Protospacer
**.*** ******************************

75. spacer 8.8|1754255|37|CP019858|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.946

ttaaaagttactacaccagttttagtagttccagcta	CRISPR spacer
ttgaaacttactacaccagttttagtagttccagcta	Protospacer
**.*** ******************************

76. spacer 8.17|1754847|37|CP019858|CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.946

gataacaaagcttgcaaagtagatatttgtgtttttc	CRISPR spacer
gatagcaaggcttgcaaagtagatatttgtgtttttc	Protospacer
****.***.****************************

77. spacer 8.18|1754913|36|CP019858|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

tgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
tgctgtgattttattaataaaacaattaataattgt	Protospacer
***********.*.**********************

78. spacer 8.26|1754912|37|CP019858|CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.946

ttgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
ttgctgtgattttattaataaaacaattaataattgt	Protospacer
************.*.**********************

79. spacer 8.28|1754857|36|CP019858|PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

gataacaaagcttgcaaagtagatatttgtgttttt	CRISPR spacer
gatagcaaggcttgcaaagtagatatttgtgttttt	Protospacer
****.***.***************************

80. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
cacattggtgttgaagctgttagcaaagctttaaaag	Protospacer
********.******************** *******

81. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.946

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
catattggtgttgaagctgttagcaaagcattaaaag	Protospacer
**.*****.****************************

82. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
cacattggtgttgaagctgttagcaaagctttaaaag	Protospacer
********.******************** *******

83. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 2, identity: 0.946

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
cacattggtgttgaagctgttagcaaagctttaaaag	Protospacer
********.******************** *******

84. spacer 9.11|1906764|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

cacattggcgttgaagctgttagcaaagcattaaaag	CRISPR spacer
cacattggtgttgaagctgttagcaaagcattgaaag	Protospacer
********.***********************.****

85. spacer 9.16|1907090|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.944

aggagataacttctattaaagataactttgatgtgg	CRISPR spacer
aggaaatgacttctattaaagataactttgatgtgg	Protospacer
****.**.****************************

86. spacer 9.16|1907090|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.944

aggagataacttctattaaagataactttgatgtgg	CRISPR spacer
aggaaatgacttctattaaagataactttgatgtgg	Protospacer
****.**.****************************

87. spacer 10.1|2263596|36|CP019858|PILER-CR,CRT matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 2, identity: 0.944

ttccgccaacaacaccagctattgcaattcctatag	CRISPR spacer
ttccaccaacaacaccagctattgctattcctatag	Protospacer
****.******************** **********

88. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.943

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
acaattattaattgttttattaataaaatcacagc	Protospacer
**********************.*.**********

89. spacer 11.5|2605092|36|CP019858|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
acaattattaattgttttattaataaaatcacagca	Protospacer
**********************.*.***********

90. spacer 19.1|3706113|22|CP019858|CRT matches to MG592608 (Vibrio phage 1.243.O._10N.261.54.B5, partial genome) position: , mismatch: 2, identity: 0.909

tgttattccatttgctccagtc	CRISPR spacer
cgatattccatttgctccagtc	Protospacer
.* *******************

91. spacer 20.3|3872367|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.941

tgttgctcctgttgctcctgctaatcctgttgct	CRISPR spacer
tgttgctcctgttgctcctgcttctcctgttgct	Protospacer
**********************  **********

92. spacer 20.3|3872367|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.941

tgttgctcctgttgctcctgctaatcctgttgct	CRISPR spacer
tgttgctcctgttgctcctgcttctcctgttgct	Protospacer
**********************  **********

93. spacer 20.5|3872466|25|CP019858|CRT matches to MN694345 (Marine virus AFVG_250M178, complete genome) position: , mismatch: 2, identity: 0.92

tgttgctccatctgctcctgtattt	CRISPR spacer
tgttgcttcatttgctcctgtattt	Protospacer
*******.***.*************

94. spacer 20.5|3872466|25|CP019858|CRT matches to MN694528 (Marine virus AFVG_250M165, complete genome) position: , mismatch: 2, identity: 0.92

tgttgctccatctgctcctgtattt	CRISPR spacer
tgttgcttcatttgctcctgtattt	Protospacer
*******.***.*************

95. spacer 20.13|3872913|22|CP019858|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

tattcctgttgctccggttgga	CRISPR spacer
tattcctgttgttccggttggc	Protospacer
***********.********* 

96. spacer 6.8|1663146|39|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 3, identity: 0.923

ttgcaaacagacgctagtttaagtgatatatcagctaag	CRISPR spacer
ctgcaaacagacgctagtttaagcgatatatcaactaag	Protospacer
.**********************.*********.*****

97. spacer 6.11|1663347|38|CP019858|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 3, identity: 0.921

ccatcttttgttgctttacataaatttatattacttat	CRISPR spacer
ccatcttttgttgctttgcatagatttatattacttac	Protospacer
*****************.****.**************.

98. spacer 8.25|1754846|38|CP019858|CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 3, identity: 0.921

tgataacaaagcttgcaaagtagatatttgtgtttttc	CRISPR spacer
agatagcaaggcttgcaaagtagatatttgtgtttttc	Protospacer
 ****.***.****************************

99. spacer 10.4|2263596|37|CP019858|CRISPRCasFinder matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 3, identity: 0.919

ttccgccaacaacaccagctattgcaattcctataga	CRISPR spacer
ttccaccaacaacaccagctattgctattcctatagc	Protospacer
****.******************** ********** 

100. spacer 20.2|3872322|25|CP019858|CRT matches to MH319749 (Marine virus AG-345-F15 Ga0172271_11 genomic sequence) position: , mismatch: 3, identity: 0.88

tgttgctccatctgctcctgttgga	CRISPR spacer
cgttgctccatctgatccagttgga	Protospacer
.************* *** ******

101. spacer 20.5|3872466|25|CP019858|CRT matches to NZ_CP019876 (Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence) position: , mismatch: 3, identity: 0.88

tgttgctccatctgctcctgtattt	CRISPR spacer
tgttgttccatctgctcctgttctt	Protospacer
*****.*************** .**

102. spacer 20.11|3872796|25|CP019858|CRT matches to MN694311 (Marine virus AFVG_250M573, complete genome) position: , mismatch: 3, identity: 0.88

ggttggtcctattaatcctgctgct	CRISPR spacer
agttgctcctataaatcctgctgct	Protospacer
.**** ****** ************

103. spacer 20.14|3872955|22|CP019858|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 3, identity: 0.864

aaatcctgttgctcctgttgcc	CRISPR spacer
tggtcctgttgctcctgttgcc	Protospacer
 ..*******************

104. spacer 20.15|3872997|25|CP019858|CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 3, identity: 0.88

atctgctcctgttgcccctgttggg	CRISPR spacer
ggctgctcctgttgcccctgttgcg	Protospacer
. ********************* *

105. spacer 20.21|3873348|31|CP019858|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 3, identity: 0.903

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tgttgggccagttggacctgttactccaatt	Protospacer
********* ******************* .

106. spacer 18.3|3245528|25|CP019858|CRISPRCasFinder matches to MN694568 (Marine virus AFVG_250M879, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tcaatttggttcatctgtatttggt	Protospacer
*    ********************

107. spacer 18.3|3245528|25|CP019858|CRISPRCasFinder matches to HQ634174 (Cyanophage MED4-213, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

108. spacer 18.3|3245528|25|CP019858|CRISPRCasFinder matches to GU071101 (Prochlorococcus phage P-HM1, complete genome) position: , mismatch: 4, identity: 0.84

tactattggttcatctgtatttggt	CRISPR spacer
tgctattggtgcatctgtatttgaa	Protospacer
*.******** ************. 

109. spacer 20.2|3872322|25|CP019858|CRT matches to NZ_CP019876 (Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence) position: , mismatch: 4, identity: 0.84

tgttgctccatctgctcctgttgga	CRISPR spacer
tgttgttccatctgctcctgttctt	Protospacer
*****.****************   

110. spacer 20.2|3872322|25|CP019858|CRT matches to MN693962 (Marine virus AFVG_250M1136, complete genome) position: , mismatch: 4, identity: 0.84

tgttgctccatctgctcctgttgga	CRISPR spacer
tgctgctccatctgctgctgttgct	Protospacer
**.************* ******  

111. spacer 20.2|3872322|25|CP019858|CRT matches to MH576968 (Streptomyces phage Wofford, complete genome) position: , mismatch: 4, identity: 0.84

tgttgctccatctgctcctgttgga	CRISPR spacer
tgttgctccatctactcctgctgcg	Protospacer
*************.******.** .

112. spacer 20.2|3872322|25|CP019858|CRT matches to MN693918 (Marine virus AFVG_250M1135, complete genome) position: , mismatch: 4, identity: 0.84

tgttgctccatctgctcctgttgga	CRISPR spacer
tgctgctccatctgctgctgttgct	Protospacer
**.************* ******  

113. spacer 20.6|3872511|25|CP019858|CRT matches to NC_023007 (Bacillus phage vB_BanS-Tsamsa, complete genome) position: , mismatch: 4, identity: 0.84

tgttggacctgctactccatctgct	CRISPR spacer
tgttggacttgctactgcatctgaa	Protospacer
********.******* ******  

114. spacer 20.15|3872997|25|CP019858|CRT matches to AP013524 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7-MedDCM-OCT-S39-C15) position: , mismatch: 4, identity: 0.84

atctgctcctgttgcccctgttggg	CRISPR spacer
tgctgctcctgttgcacctgttggc	Protospacer
  ************* ******** 

115. spacer 20.15|3872997|25|CP019858|CRT matches to NZ_CP019365 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpE43, complete sequence) position: , mismatch: 4, identity: 0.84

atctgctcctgttgcccctgttggg	CRISPR spacer
atcttctcctgtagcccctgttgct	Protospacer
**** ******* **********  

116. spacer 20.15|3872997|25|CP019858|CRT matches to NZ_CP019368 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence) position: , mismatch: 4, identity: 0.84

atctgctcctgttgcccctgttggg	CRISPR spacer
atcttctcctgtagcccctgttgct	Protospacer
**** ******* **********  

117. spacer 20.15|3872997|25|CP019858|CRT matches to NZ_CP019369 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpU43, complete sequence) position: , mismatch: 4, identity: 0.84

atctgctcctgttgcccctgttggg	CRISPR spacer
atcttctcctgtagcccctgttgct	Protospacer
**** ******* **********  

118. spacer 20.15|3872997|25|CP019858|CRT matches to MK113950 (Phage 5P_2, complete genome) position: , mismatch: 4, identity: 0.84

atctgctcctgttgcccctgttggg	CRISPR spacer
atctgctcctgttgctcctggtgac	Protospacer
***************.**** **. 

119. spacer 20.21|3873348|31|CP019858|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 4, identity: 0.871

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tattgggccagttggacctgttactccaatt	Protospacer
*.******* ******************* .

120. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 5, identity: 0.868

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
aatcatccttattgttgttgttattcttattgttattc	Protospacer
 * * *..******************************

121. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 5, identity: 0.815

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaatcattcataaaagtatgcga	Protospacer
 ****** **** *********** .*

122. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_LR135332 (Enterococcus faecium isolate E7471 plasmid 2) position: , mismatch: 5, identity: 0.815

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaatcattcataaaagtatgcga	Protospacer
 ****** **** *********** .*

123. spacer 12.2|2770904|38|CP019858|PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.868

ctctattttttctattattattttatttccatcaaacc	CRISPR spacer
atctattttttctattactattttattaccatcaaaag	Protospacer
 ****************.********* ********  

124. spacer 12.2|2770904|38|CP019858|PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 5, identity: 0.868

ctctattttttctattattattttatttccatcaaacc	CRISPR spacer
atctattttttctattactattttattaccatcaaaag	Protospacer
 ****************.********* ********  

125. spacer 12.2|2770904|38|CP019858|PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 5, identity: 0.868

ctctattttttctattattattttatttccatcaaacc	CRISPR spacer
atctattttttctattactattttattaccatcaaaag	Protospacer
 ****************.********* ********  

126. spacer 20.5|3872466|25|CP019858|CRT matches to CP053324 (Salmonella enterica subsp. salamae serovar 40:c:e,n,z15 strain 2013K-0524 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

tgttgctccatctgctcctgtattt	CRISPR spacer
acatgctccatctgttcctgtatta	Protospacer
   ***********.********* 

127. spacer 20.15|3872997|25|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.8

atctgctcctgttgcccctgttggg	CRISPR spacer
cgttgctcctgttgctcctgttggc	Protospacer
  .************.******** 

128. spacer 20.15|3872997|25|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.8

atctgctcctgttgcccctgttggg	CRISPR spacer
cgttgctcctgttgctcctgttggc	Protospacer
  .************.******** 

129. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.853

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttggccctgttgctcctgttgctcctgttgct	Protospacer
.***** ********.****************  

130. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 5, identity: 0.853

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttggccctgttgctcctgttgctcctgttgct	Protospacer
.***** ********.****************  

131. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.853

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
tgttgggcctgttgctcctgttgctcccgtcgat	Protospacer
***************.***********.**.*. 

132. spacer 20.22|3873399|34|CP019858|CRT matches to MN694423 (Marine virus AFVG_250M1001, complete genome) position: , mismatch: 5, identity: 0.853

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
tgttgggccagttgccccagttgctcctgtcgcc	Protospacer
********* ******** ***********.*  

133. spacer 2.1|141460|29|CP019858|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

134. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

135. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

136. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

137. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

138. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

139. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

140. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

141. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 6, identity: 0.833

-ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
gataaagctttt-tttatttttgtttcataatcttcc	Protospacer
  ** *.***** ** *******************.*

142. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_CP035656 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed2) position: , mismatch: 6, identity: 0.778

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaaccattcataaaagtatgcgc	Protospacer
 ****** **** *********** . 

143. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_CP012462 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2) position: , mismatch: 6, identity: 0.778

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaaccattcataaaagtatgcgc	Protospacer
 ****** **** *********** . 

144. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_CP012462 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p2) position: , mismatch: 6, identity: 0.778

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaaccattcataaaagtatgcgc	Protospacer
 ****** **** *********** . 

145. spacer 8.27|1754791|27|CP019858|PILER-CR matches to NZ_CP035662 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed2) position: , mismatch: 6, identity: 0.778

gatttaaacattgataaaagtatgaaa	CRISPR spacer
catttaaccattcataaaagtatgcgc	Protospacer
 ****** **** *********** . 

146. spacer 19.2|3706158|31|CP019858|CRT matches to MN693124 (Marine virus AFVG_25M44, complete genome) position: , mismatch: 6, identity: 0.806

tgtagagcctgttattccatttgctccagtt	CRISPR spacer
tattgttcctgttattccatttactccattt	Protospacer
*.* *  ***************.***** **

147. spacer 20.15|3872997|25|CP019858|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 6, identity: 0.76

atctgctcctgttgcccctgttggg	CRISPR spacer
tgttgctcctgttgcccctgttcca	Protospacer
  .*******************  .

148. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to MG869618 (Polaromonas sp. E5S plasmid pE5SP1, complete sequence) position: , mismatch: 7, identity: 0.774

caatacctctggtattggcggatttattata	CRISPR spacer
cagcacctctggtactggctgatttatcttt	Protospacer
**..**********.**** *******. * 

149. spacer 19.2|3706158|31|CP019858|CRT matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 7, identity: 0.774

tgtagagcctgtt---attccatttgctccagtt	CRISPR spacer
---aaatgctgctctaattccatttgctccagtt	Protospacer
   *.*  ***.*   ******************

150. spacer 20.3|3872367|34|CP019858|CRT matches to NZ_CP047963 (Aeromonas media strain MC64 plasmid pMC64A, complete sequence) position: , mismatch: 7, identity: 0.794

tgttgctcctgttgctcctgctaat--cctgttgct	CRISPR spacer
tgttgctcatgttgctcctgccaatggcaggctg--	Protospacer
******** ************.***  *  *.**  

151. spacer 20.16|3873042|34|CP019858|CRT matches to MG945433 (UNVERIFIED: Microviridae sp. isolate 4854-1711, complete genome) position: , mismatch: 7, identity: 0.794

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
ttctgctccttctgctcctgttgctccgtctact	Protospacer
* .****** *****************  .*.**

152. spacer 20.16|3873042|34|CP019858|CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 7, identity: 0.794

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
ctctcctccggctgctcctgttgcccctgttgcg	Protospacer
. .* ***** *************.******** 

153. spacer 20.16|3873042|34|CP019858|CRT matches to MG945309 (UNVERIFIED: Microviridae sp. isolate 786-1711, complete genome) position: , mismatch: 7, identity: 0.794

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
ttctgctccttctgctcctgttgctccctctact	Protospacer
* .****** *****************. .*.**

154. spacer 20.16|3873042|34|CP019858|CRT matches to MH412654 (Synechococcus phage S-T4, complete genome) position: , mismatch: 7, identity: 0.794

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tggtggtgtctctgctactgctgctcctgttgct	Protospacer
** ** * . ****** ***.*************

155. spacer 20.16|3873042|34|CP019858|CRT matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 7, identity: 0.794

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tggtggtgtctctgctactgctgctcctgttgct	Protospacer
** ** * . ****** ***.*************

156. spacer 20.21|3873348|31|CP019858|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 7, identity: 0.774

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
ttgagggcctgttggacctgttacaccgatt	Protospacer
*   ******************** **.* .

157. spacer 20.21|3873348|31|CP019858|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 7, identity: 0.774

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tgttggacctgttggacctgttggacctgtc	Protospacer
******.***************.  ** . *

158. spacer 20.21|3873348|31|CP019858|CRT matches to CP024691 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-7-9K, complete sequence) position: , mismatch: 7, identity: 0.774

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
ttgagggcctgttggacctgttacacctatt	Protospacer
*   ******************** ** * .

159. spacer 20.21|3873348|31|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
cgatggacctgttggtcctgttactcccgat	Protospacer
.* ***.******** *********** .*.

160. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.794

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
tgcttctcctgttgctcctgttgctcctgttgct	Protospacer
**.*   ********.****************  

161. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 7, identity: 0.794

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
actaggtcctgttgctcctgttgctcctgttgct	Protospacer
  * ** ********.****************  

162. spacer 20.22|3873399|34|CP019858|CRT matches to AP013524 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7-MedDCM-OCT-S39-C15) position: , mismatch: 7, identity: 0.794

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
agcagcgcctgttgcgcctgctgctcctgttgca	Protospacer
 *. * ********* ****.*********** *

163. spacer 20.22|3873399|34|CP019858|CRT matches to MN693798 (Marine virus AFVG_250M119, complete genome) position: , mismatch: 7, identity: 0.794

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
tgtgcctcctgttgctcctgttgctcctgttgct	Protospacer
***    ********.****************  

164. spacer 20.22|3873399|34|CP019858|CRT matches to KF437907 (Phormidium phage MIS-PhV1A, complete genome) position: , mismatch: 7, identity: 0.794

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgtagctcctgttgctcctgttgctccttttgca	Protospacer
.** *  ********.************ *** *

165. spacer 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.778

tggacacaacaaaaatttttcaaaccttttaaaaga	CRISPR spacer
tttaaacttaaaaaatttttaaaaacttttaaaaga	Protospacer
*  * **   ********** *** ***********

166. spacer 9.18|1907221|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044536 (Borrelia sp. CA690 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.778

tggacacaacaaaaa-tttttcaaaccttttaaaaga	CRISPR spacer
-gaatctattaaaaattttttcaaacctttcaaaaga	Protospacer
 *.*. .* .***** **************.******

167. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.742

caatacctctggtattggcggatttattata	CRISPR spacer
cgagcaacttggtattggcggatttatgata	Protospacer
*.*    ..****************** ***

168. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

169. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

170. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

171. spacer 20.16|3873042|34|CP019858|CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

172. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

173. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

174. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
gcctgctcggtctgctcctgttgctgctgcaggt	Protospacer
  .***** **************** ***. * *

175. spacer 20.18|3873138|34|CP019858|CRT matches to MN693652 (Marine virus AFVG_250M189, complete genome) position: , mismatch: 8, identity: 0.765

aggtgttcctgtcgctcctgttggacctattaat	CRISPR spacer
atttgttcctgacgctcctgttgaacccgttgac	Protospacer
*  ******** ***********.***..**.*.

176. spacer 20.21|3873348|31|CP019858|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tgttggacctgttggacctgttggaccggtt	Protospacer
******.***************.  **.. .

177. spacer 20.21|3873348|31|CP019858|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
ttgaggtcctgttggacctgttacacctatt	Protospacer
*   ** ***************** ** * .

178. spacer 20.21|3873348|31|CP019858|CRT matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
ggttgggcctgttgggcctgttatacctgtt	Protospacer
 **************.*******. ** . .

179. spacer 20.21|3873348|31|CP019858|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tgttggtcctgttggacctgttgaacctgtt	Protospacer
****** ***************.  ** . .

180. spacer 20.21|3873348|31|CP019858|CRT matches to NZ_CP028885 (Borrelia turcica IST7 plasmid lp129, complete sequence) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
tgttgggcctgttgggcctgttgggcttatt	Protospacer
***************.******.  *. * .

181. spacer 20.21|3873348|31|CP019858|CRT matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 8, identity: 0.742

tgttgggcctgttggacctgttactccaaac	CRISPR spacer
agttgggcctgttgaacctgttattgatgaa	Protospacer
 *************.********.*   .* 

182. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
ggatactcctgttgctcctgttgctcctgttgct	Protospacer
 * *.  ********.****************  

183. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgtcactcctgttgctcctgttgctcctgttgct	Protospacer
.**..  ********.****************  

184. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcccgttgctcctgttgct	Protospacer
.***.  ********.**.*************  

185. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcccgttgctcctgttgct	Protospacer
.***.  ********.**.*************  

186. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttactcctgttgctcctgttgct	Protospacer
.***.  ******.*.****************  

187. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgtcactcctgttgctcctgttgctcctgttgct	Protospacer
.**..  ********.****************  

188. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttactcctgttgctcctgttgct	Protospacer
.***.  ******.*.****************  

189. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcccgttgctcctgttgct	Protospacer
.***.  ********.**.*************  

190. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 8, identity: 0.765

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
atctggaaatgttggccctgttggtcctgttgga	Protospacer
  .***.  ***** ******** **********

191. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024317 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

192. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024206 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

193. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024352 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

194. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

195. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024372 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

196. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024391 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

197. spacer 4.3|1342085|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024334 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp72, complete sequence) position: , mismatch: 9, identity: 0.75

ctataacttttattaatttttgtttcataatctttc	CRISPR spacer
tcataaattttattaatttttgcttcatctttatta	Protospacer
..**** ***************.*****  *. ** 

198. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 9, identity: 0.743

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
tgaattcttaattgttttattagagaaataccttt	Protospacer
  **** **************** *****  *  .

199. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to NZ_MK748464 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07060 clone Ren-PNG-07060, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

200. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to NZ_MK748465 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-PNG-07113 clone Ren-PNG-07113, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

201. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to NZ_MK748462 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Bali-16-03 clone Ren-Bali-16-03, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

202. spacer 18.1|3245393|31|CP019858|CRISPRCasFinder matches to NZ_MK748463 (Candidatus Endohaliclona renieramycinifaciens plasmid p-ren_Ren-Pal-02 clone Ren-Pal-02, complete sequence) position: , mismatch: 9, identity: 0.71

caatacctctggtattggcggatttattata	CRISPR spacer
tgcagcctctgatattggcgtatttattact	Protospacer
..  .******.******** ********. 

203. spacer 20.16|3873042|34|CP019858|CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgctccg--tctgctcctgttgctcctgttgct	CRISPR spacer
--tcatctcggttctgctcctgctgctcctgtcgct	Protospacer
  *.....**  **********.*********.***

204. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
tccaacacccgttgcccctgttggtcctgttggt	Protospacer
* . . .**.************* ********* 

205. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
agttacccctgttgctcctgttactcctgttatt	Protospacer
 ***.  ********.******.********.  

206. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgtcactcctgttgctcccgttgctcctgttgct	Protospacer
.**..  ********.**.*************  

207. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcctgttgctcccgttact	Protospacer
.***.  ********.***********.***.  

208. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcctgttgctcccgttact	Protospacer
.***.  ********.***********.***.  

209. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcctgttgctcccgttact	Protospacer
.***.  ********.***********.***.  

210. spacer 20.22|3873399|34|CP019858|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcctgttgctcccgttact	Protospacer
.***.  ********.***********.***.  

211. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgtcactcctgttgctcccgttgctcctgttgct	Protospacer
.**..  ********.**.*************  

212. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttactcctgttgctcctgttgctcccgttact	Protospacer
.***.  ********.***********.***.  

213. spacer 20.22|3873399|34|CP019858|CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.735

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
ggtcaccactgttgcctctgatgctcctgttgaa	Protospacer
 **..   ********.*** ***********.*

214. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009639 (Bacillus cereus 03BB108 plasmid pBFI_1, complete sequence) position: , mismatch: 10, identity: 0.737

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
cattattcgaattgttattgttattgttattgttattg	Protospacer
.* . **.  ******.******** *********** 

215. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053963 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.737

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
cattattcgaattgttattgttattgttattgttattg	Protospacer
.* . **.  ******.******** *********** 

216. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047143 (Lactobacillus sp. C25 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.737

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
ttgatgagttattgttgttgttattattgttgttatta	Protospacer
* . .   ***************** **.******** 

217. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049229 (Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence) position: , mismatch: 10, identity: 0.737

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
tattagaactattgttattgttattattattgttatta	Protospacer
** .    .*******.******** *********** 

218. spacer 7.6|1753293|38|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049229 (Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence) position: , mismatch: 10, identity: 0.737

taacctttttattgttgttgttattcttattgttattc	CRISPR spacer
tattagaactattgttattgttattattattgttatta	Protospacer
** .    .*******.******** *********** 

219. spacer 8.18|1754913|36|CP019858|CRISPRCasFinder matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

tgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
aaaaggtatttctctaataaaacaattaagaattca	Protospacer
 .  *  ***** **************** ****  

220. spacer 9.19|1907286|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to AP013411 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C108A-MedDCM-OCT-S29-C43) position: , mismatch: 10, identity: 0.722

aatttctgtgctaaaaatttagttacagaatataaa	CRISPR spacer
aatttctttgctaaaaatttagctacttcattacct	Protospacer
******* **************.***   **     

221. spacer 9.19|1907286|36|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to AP013669 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C108A-MedDCM-OCT-S25-C43, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.722

aatttctgtgctaaaaatttagttacagaatataaa	CRISPR spacer
aatttctttgctaaaaatttagctacttcattacct	Protospacer
******* **************.***   **     

222. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to NC_022783 (Bacillus toyonensis BCT-7112 plasmid pBCT8, complete sequence) position: , mismatch: 10, identity: 0.714

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
ggtattattacttgtttttttagtgaaaataaaat	Protospacer
.  ******* ******* ********* .* *..

223. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 10, identity: 0.714

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
gaagtcattaattgttttattaatgatatcaagaa	Protospacer
. *.*.****************.*** **** .. 

224. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 10, identity: 0.714

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
gaagtcattaattgttttattaatgatatcaagaa	Protospacer
. *.*.****************.*** **** .. 

225. spacer 11.1|2605092|35|CP019858|PILER-CR,CRT matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 10, identity: 0.714

acaattattaattgttttattagtgaaatcacagc	CRISPR spacer
gaagtcattaattgttttattaatgatatcaagaa	Protospacer
. *.*.****************.*** **** .. 

226. spacer 11.5|2605092|36|CP019858|CRISPRCasFinder matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
tgaattcttaattgttttattagagaaatacctttt	Protospacer
  **** **************** *****  *  . 

227. spacer 19.7|3706401|40|CP019858|CRT matches to MH884511 (Exiguobacterium phage vB_EalM-132, complete genome) position: , mismatch: 10, identity: 0.75

tgttattccatttgctccggtcgctccagttgcacctcta	CRISPR spacer
tactaccgcatttgctccgttggctccagttgcaccatca	Protospacer
*..**.. *********** * ************** ..*

228. spacer 20.16|3873042|34|CP019858|CRT matches to MN176227 (Bacillus phage 049ML001, complete genome) position: , mismatch: 10, identity: 0.706

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tccaaatccgtctgcgccttttgctcctgtatca	Protospacer
* . . ********* *** **********  * 

229. spacer 20.16|3873042|34|CP019858|CRT matches to X89721 (Bacteriophage SPP1 head morphogenesis genes 7 to 15) position: , mismatch: 10, identity: 0.706

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tccaaatccgtctgcaccttttgctcctgtatca	Protospacer
* . . ********* *** **********  * 

230. spacer 20.16|3873042|34|CP019858|CRT matches to MN176228 (Bacillus phage 049ML003, complete genome) position: , mismatch: 10, identity: 0.706

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tccaaatccgtctgcgccttttgctcctgtatca	Protospacer
* . . ********* *** **********  * 

231. spacer 20.16|3873042|34|CP019858|CRT matches to X97918 (Bacteriophage SPP1 complete nucleotide sequence) position: , mismatch: 10, identity: 0.706

tgttgctccgtctgctcctgttgctcctgttgct	CRISPR spacer
tccaaatccgtctgcaccttttgctcctgtatca	Protospacer
* . . ********* *** **********  * 

232. spacer 20.18|3873138|34|CP019858|CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

aggtgttcctgtcgctcctgttggacctattaat	CRISPR spacer
tgtcagacctgttgctcccgttggacctatttct	Protospacer
 * ..  *****.*****.************  *

233. spacer 20.18|3873138|34|CP019858|CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

aggtgttcctgtcgctcctgttggacctattaat	CRISPR spacer
tgtcagacctgttgctcccgttggacctatttct	Protospacer
 * ..  *****.*****.************  *

234. spacer 20.18|3873138|34|CP019858|CRT matches to NZ_CP020744 (Bacillus mycoides strain Gnyt1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

aggtgttcctgtcgctcctgttggacctattaat	CRISPR spacer
tgtcagacctgttgctcccgttggacctatttct	Protospacer
 * ..  *****.*****.************  *

235. spacer 20.18|3873138|34|CP019858|CRT matches to MT219824 (Escherichia coli strain RT18-1 plasmid pRT18-1_294k_tetX, complete sequence) position: , mismatch: 10, identity: 0.706

aggtgttcctgtcgctcctgttggacctattaat	CRISPR spacer
tgtaggacctgtcgctcctgtaggacctgttgcg	Protospacer
 *  *  ************** ******.**.  

236. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

---------tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
cgttattcctgttgggcctgttgctcctgttgct---------	Protospacer
         ***************.*********         

237. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP019365 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpE43, complete sequence) position: , mismatch: 10, identity: 0.706

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
atcttctcctgtagcccctgttgctgctgtttta	Protospacer
  .*   ***** ************ *****  *

238. spacer 20.22|3873399|34|CP019858|CRT matches to NZ_CP019368 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpT39, complete sequence) position: , mismatch: 10, identity: 0.706

tgttgggcctgttgcccctgttgctcctgttgga	CRISPR spacer
atcttctcctgtagcccctgttgctgctgtttta	Protospacer
  .*   ***** ************ *****  *

239. spacer 7.5|1753227|37|CP019858|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047444 (Spiroplasma citri strain BLH-MB plasmid pSciBLHMB-7) position: , mismatch: 11, identity: 0.703

gactttgaagaaaataatttagttatatcttgggaag	CRISPR spacer
aatgatgaaaaaaataatttaattatatcttatataa	Protospacer
.*.  ****.***********.*********. . *.

240. spacer 8.26|1754912|37|CP019858|CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 11, identity: 0.703

ttgctgtgatttcactaataaaacaattaataattgt	CRISPR spacer
caaaaggtatttctctaataaaacaattaagaattca	Protospacer
. .  *  ***** **************** ****  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 206307 : 297681 75 Clostridium_phage(10.34%) protease,transposase,coat NA
DBSCAN-SWA_2 452172 : 464007 12 Streptococcus_phage(37.5%) tRNA,integrase attL 441525:441538|attR 459968:459981
DBSCAN-SWA_3 488659 : 505739 17 Streptococcus_phage(83.33%) NA NA
DBSCAN-SWA_4 1151427 : 1204918 85 Clostridium_phage(92.94%) terminase,integrase,capsid,portal,tail attL 1159031:1159049|attR 1177709:1177727
DBSCAN-SWA_5 1472577 : 1497099 29 Clostridium_phage(54.55%) tail NA
DBSCAN-SWA_6 1584422 : 1594149 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_7 1719084 : 1776006 78 Clostridium_phage(78.87%) terminase,head,capsid,holin,portal,tail NA
DBSCAN-SWA_8 1783999 : 1790513 8 Streptococcus_phage(85.71%) NA NA
DBSCAN-SWA_9 1930279 : 1962489 29 Clostridium_phage(42.11%) protease,terminase,head,capsid,lysis,holin,portal,tail NA
DBSCAN-SWA_10 2603784 : 2609728 10 Clostridium_phage(71.43%) transposase NA
DBSCAN-SWA_11 3159140 : 3168093 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_12 3732802 : 3843835 121 Clostridium_phage(70.0%) protease,plate,tRNA,integrase,portal,tail attL 3729515:3729536|attR 3843332:3843353
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage