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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP016104 Clostridioides difficile strain DSM 29629 chromosome, complete genome 12 crisprs cas14j,PD-DExK,WYL,c2c9_V-U4,cas3,DEDDh,DinG,csa3,cas14k,cas5,cas7,cas6 4 37 10 1

Results visualization

1. CP016104
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_1 634935-635059 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_2 1347267-1347822 Orphan I-A
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_3 1557411-1558098 Orphan I-A
10 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_4 1667351-1667773 Orphan I-A
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_5 1757541-1758096 Orphan I-A
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_6 1758698-1759519 Orphan I-A
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_7 1761107-1761463 Orphan I-A
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_8 1893798-1894091 Orphan I-A
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_9 2690171-2690331 Unclear NA
2 spacers
cas3,cas5,cas7,cas6,c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_10 2777500-2778381 TypeV I-A
13 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_16 3642123-3642326 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP016104_17 3642858-3644034 Orphan NA
20 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP016104_17 17.14|3643693|20|CP016104|CRT 3643693-3643712 20 CP016104.1 3757505-3757524 1 0.95
CP016104_17 17.16|3643792|20|CP016104|CRT 3643792-3643811 20 CP016104.1 3757505-3757524 1 0.95
CP016104_17 17.19|3643936|20|CP016104|CRT 3643936-3643955 20 CP016104.1 3757505-3757524 1 0.95
CP016104_17 17.14|3643693|20|CP016104|CRT 3643693-3643712 20 CP016104.1 3756983-3757002 2 0.9
CP016104_17 17.16|3643792|20|CP016104|CRT 3643792-3643811 20 CP016104.1 3756983-3757002 2 0.9
CP016104_17 17.17|3643837|20|CP016104|CRT 3643837-3643856 20 CP016104.1 3757505-3757524 2 0.9
CP016104_17 17.19|3643936|20|CP016104|CRT 3643936-3643955 20 CP016104.1 3756983-3757002 2 0.9

1. spacer 17.14|3643693|20|CP016104|CRT matches to position: 3757505-3757524, mismatch: 1, identity: 0.95

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttactccat	Protospacer
**************.*****

2. spacer 17.16|3643792|20|CP016104|CRT matches to position: 3757505-3757524, mismatch: 1, identity: 0.95

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttactccat	Protospacer
**************.*****

3. spacer 17.19|3643936|20|CP016104|CRT matches to position: 3757505-3757524, mismatch: 1, identity: 0.95

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttactccat	Protospacer
**************.*****

4. spacer 17.14|3643693|20|CP016104|CRT matches to position: 3756983-3757002, mismatch: 2, identity: 0.9

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttgctccat	Protospacer
*************..*****

5. spacer 17.16|3643792|20|CP016104|CRT matches to position: 3756983-3757002, mismatch: 2, identity: 0.9

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttgctccat	Protospacer
*************..*****

6. spacer 17.17|3643837|20|CP016104|CRT matches to position: 3757505-3757524, mismatch: 2, identity: 0.9

tgtcggacctgttattccat	CRISPR spacer
tgttggacctgttactccat	Protospacer
***.**********.*****

7. spacer 17.19|3643936|20|CP016104|CRT matches to position: 3756983-3757002, mismatch: 2, identity: 0.9

tgttggacctgttattccat	CRISPR spacer
tgttggacctgttgctccat	Protospacer
*************..*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP016104_2 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347427-1347463 37 NC_011398 Clostridium phage phiCD27, complete genome 18184-18220 0 1.0
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 64619-64655 0 1.0
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 111177-111213 0 1.0
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 MF547662 Clostridioides phage LIBA6276, complete genome 64522-64558 0 1.0
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 57345-57381 0 1.0
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 LN681537 Clostridium phage phiCD211, complete genome 66207-66243 0 1.0
CP016104_3 3.6|1557770|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557770-1557805 36 GU949551 Clostridium phage phiCD6356, complete genome 15116-15151 0 1.0
CP016104_3 3.9|1557967|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557967-1558003 37 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 50447-50483 0 1.0
CP016104_5 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757699-1757735 37 KU057941 Clostridium phage CDSH1, complete genome 15973-16009 0 1.0
CP016104_5 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757699-1757735 37 HM568888 Clostridium phage phiCD38-2, complete genome 15469-15505 0 1.0
CP016104_5 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757699-1757735 37 LN881738 Escherichia phage slur17, complete genome 4428-4464 0 1.0
CP016104_5 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757896-1757932 37 MF547662 Clostridioides phage LIBA6276, complete genome 85584-85620 0 1.0
CP016104_5 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757896-1757932 37 MF547663 Clostridioides phage LIBA2945, complete genome 84307-84343 0 1.0
CP016104_6 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758793-1758830 38 KU057941 Clostridium phage CDSH1, complete genome 10566-10603 0 1.0
CP016104_6 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758793-1758830 38 NC_028905 Clostridium phage phiCD111, complete genome 10594-10631 0 1.0
CP016104_6 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758793-1758830 38 LN881738 Escherichia phage slur17, complete genome 9834-9871 0 1.0
CP016104_6 6.3|1758860|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758860-1758896 37 NC_028996 Clostridium phage phiCDHM19, complete genome 38312-38348 0 1.0
CP016104_6 6.3|1758860|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758860-1758896 37 LN681541 Clostridium phage phiMMP01, complete genome 33821-33857 0 1.0
CP016104_6 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759124-1759160 37 LN881738 Escherichia phage slur17, complete genome 19522-19558 0 1.0
CP016104_6 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759124-1759160 37 KU057941 Clostridium phage CDSH1, complete genome 879-915 0 1.0
CP016104_6 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759124-1759160 37 NC_028905 Clostridium phage phiCD111, complete genome 907-943 0 1.0
CP016104_10 10.2|2777595|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777595-2777630 36 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 64436-64471 0 1.0
CP016104_10 10.12|2778250|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 2778250-2778287 38 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 29192-29229 0 1.0
CP016104_2 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347427-1347463 37 NC_048642 Clostridium phage CDKM9, complete genome 18101-18137 1 0.973
CP016104_3 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557572-1557607 36 MF547663 Clostridioides phage LIBA2945, complete genome 64451-64486 1 0.972
CP016104_3 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557637-1557673 37 MF547663 Clostridioides phage LIBA2945, complete genome 62987-63023 1 0.973
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 20150-20185 1 0.972
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 NC_007917 Clostridium phage phi CD119, complete genome 20150-20185 1 0.972
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 NC_028996 Clostridium phage phiCDHM19, complete genome 20404-20439 1 0.972
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 NC_028838 Clostridium phage phiCD506, complete genome 13735-13770 1 0.972
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 LN681538 Clostridium phage phiCD481-1, complete genome 13762-13797 1 0.972
CP016104_5 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757896-1757932 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 124235-124271 1 0.973
CP016104_6 6.1|1758727|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758727-1758763 37 NC_028996 Clostridium phage phiCDHM19, complete genome 16746-16782 1 0.973
CP016104_6 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758793-1758830 38 HM568888 Clostridium phage phiCD38-2, complete genome 10210-10247 1 0.974
CP016104_6 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759058-1759094 37 NZ_MG019959 Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence 383-419 1 0.973
CP016104_6 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759058-1759094 37 NZ_MG019961 Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence 387-423 1 0.973
CP016104_6 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759058-1759094 37 NZ_MG019962 Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence 383-419 1 0.973
CP016104_6 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759058-1759094 37 NZ_MG019960 Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence 383-419 1 0.973
CP016104_6 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759124-1759160 37 HM568888 Clostridium phage phiCD38-2, complete genome 907-943 1 0.973
CP016104_10 10.12|2778250|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 2778250-2778287 38 KX905163 Clostridioides phage phiSemix9P1, complete genome 37671-37708 1 0.974
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 MK473382 Clostridium phage JD032, complete genome 22860-22896 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 18658-18694 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 NC_048665 Clostridium phage phiCDHM14, complete genome 11816-11852 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 NC_007917 Clostridium phage phi CD119, complete genome 18658-18694 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 NC_028996 Clostridium phage phiCDHM19, complete genome 18911-18947 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 JX145342 Clostridium phage phiMMP04, complete genome 11797-11833 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 HG796225 Clostridium phage phiCDHM13 complete genome 11784-11820 2 0.946
CP016104_3 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557506-1557542 37 HG798901 Clostridium phage phiCDHM11 complete genome 11783-11819 2 0.946
CP016104_4 4.2|1667446|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667446-1667482 37 GU949551 Clostridium phage phiCD6356, complete genome 27126-27162 2 0.946
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 NC_048665 Clostridium phage phiCDHM14, complete genome 13309-13344 2 0.944
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 MK473382 Clostridium phage JD032, complete genome 21368-21403 2 0.944
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 HG796225 Clostridium phage phiCDHM13 complete genome 13277-13312 2 0.944
CP016104_4 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1667642-1667677 36 HG798901 Clostridium phage phiCDHM11 complete genome 13276-13311 2 0.944
CP016104_4 4.6|1667707|38|CP016104|CRISPRCasFinder,CRT 1667707-1667744 38 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 94861-94898 2 0.947
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_028905 Clostridium phage phiCD111, complete genome 1668-1702 2 0.943
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 HM568888 Clostridium phage phiCD38-2, complete genome 1668-1702 2 0.943
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_028958 Clostridium phage phiCD146, complete genome 1673-1707 2 0.943
CP016104_5 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757699-1757735 37 NC_028958 Clostridium phage phiCD146, complete genome 15478-15514 2 0.946
CP016104_8 8.4|1894025|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1894025-1894062 38 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 26432-26469 2 0.947
CP016104_10 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777529-2777565 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 11203-11239 2 0.946
CP016104_10 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777529-2777565 37 MF547663 Clostridioides phage LIBA2945, complete genome 111955-111991 2 0.946
CP016104_10 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777529-2777565 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 110761-110797 2 0.946
CP016104_10 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777529-2777565 37 LN681537 Clostridium phage phiCD211, complete genome 119623-119659 2 0.946
CP016104_10 10.6|2777856|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777856-2777892 37 HM568888 Clostridium phage phiCD38-2, complete genome 1507-1543 2 0.946
CP016104_10 10.13|2778317|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 2778317-2778352 36 NC_011398 Clostridium phage phiCD27, complete genome 47401-47436 2 0.944
CP016104_2 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347427-1347463 37 JX145341 Clostridium phage phiMMP02, complete genome 18069-18105 3 0.919
CP016104_3 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557572-1557607 36 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 61102-61137 3 0.917
CP016104_3 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557572-1557607 36 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 60863-60898 3 0.917
CP016104_3 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557572-1557607 36 LN681537 Clostridium phage phiCD211, complete genome 69725-69760 3 0.917
CP016104_3 3.5|1557703|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1557703-1557740 38 HM568888 Clostridium phage phiCD38-2, complete genome 9304-9341 3 0.921
CP016104_5 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757962-1757999 38 KU057941 Clostridium phage CDSH1, complete genome 7234-7271 3 0.921
CP016104_5 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757962-1757999 38 LN881738 Escherichia phage slur17, complete genome 13166-13203 3 0.921
CP016104_5 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757962-1757999 38 NC_028905 Clostridium phage phiCD111, complete genome 7263-7300 3 0.921
CP016104_17 17.20|3643981|29|CP016104|CRT 3643981-3644009 29 NZ_CP053933 Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence 41416-41444 3 0.897
CP016104_17 17.20|3643981|29|CP016104|CRT 3643981-3644009 29 NZ_CP053936 Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence 11736-11764 3 0.897
CP016104_17 17.20|3643981|29|CP016104|CRT 3643981-3644009 29 NZ_CP009718 Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence 15408-15436 3 0.897
CP016104_6 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT 1758793-1758830 38 NC_028958 Clostridium phage phiCD146, complete genome 10222-10259 4 0.895
CP016104_6 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759322-1759358 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 6235-6271 4 0.892
CP016104_6 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759322-1759358 37 NC_007917 Clostridium phage phi CD119, complete genome 6235-6271 4 0.892
CP016104_6 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1759322-1759358 37 NC_028996 Clostridium phage phiCDHM19, complete genome 6483-6519 4 0.892
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 127029-127057 4 0.862
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 995-1023 4 0.862
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 MK614706 Gammaproteobacteria virus GOV_bin_2604, complete genome 25941-25969 4 0.862
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 141-169 5 0.828
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 240-268 5 0.828
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321878-321906 5 0.828
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 MG209611 Aphanizomenon phage vB_AphaS-CL131, complete genome 32380-32408 5 0.828
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 MN693631 Marine virus AFVG_250M1143, complete genome 12342-12370 5 0.828
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 NZ_CP012105 Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence 995-1023 5 0.828
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 MN693300 Marine virus AFVG_25M71, complete genome 31133-31161 5 0.828
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 MN693380 Marine virus AFVG_25M72, complete genome 31847-31875 5 0.828
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 MK614706 Gammaproteobacteria virus GOV_bin_2604, complete genome 25941-25969 5 0.828
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NC_047707 Uncultured phage_MedDCM-OCT-S38-C3 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C3 32618-32646 5 0.828
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NC_007103 Bacillus cereus E33L plasmid pE33L466, complete sequence 411-439 6 0.793
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NZ_CP009967 Bacillus cereus E33L plasmid pBCO_1, complete sequence 321734-321762 6 0.793
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 MN693968 Marine virus AFVG_250M909, complete genome 17688-17716 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 355508-355536 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 355517-355545 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 CP013001 Bacillus thuringiensis strain XL6 plasmid, complete sequence 355751-355779 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120031-120059 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120040-120068 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120049-120077 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120058-120086 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120067-120095 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120076-120104 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120085-120113 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120094-120122 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120103-120131 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120112-120140 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120121-120149 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 253688-253716 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 CP024687 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence 243084-243112 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 MN694558 Marine virus AFVG_250M9, complete genome 20695-20723 6 0.793
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 MN694640 Marine virus AFVG_250M10, complete genome 20707-20735 6 0.793
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MN864145 Escherichia phage F2, complete genome 152748-152784 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MN850579 Escherichia phage mogra, complete genome 94627-94663 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KT184309 Enterobacteria phage ATK47, complete genome 93161-93197 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MT446423 UNVERIFIED: Escherichia virus TH58, complete genome 31816-31852 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 LR027391 Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar009P5 genome assembly, chromosome: 1 110331-110367 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK047718 Escherichia phage p000y, complete genome 11929-11965 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KT184310 Enterobacteria phage ATK48, complete genome 21665-21701 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK639187 Shigella phage SSE1, complete genome 32250-32286 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_018855 Enterobacteria phage HX01, complete genome 25444-25480 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_041990 Escherichia phage ST0, complete genome 150283-150319 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KR422352 Escherichia phage APCEc01, complete genome 104637-104673 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MT446390 UNVERIFIED: Escherichia virus TH12, complete genome 90627-90663 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MN850622 Escherichia phage mobillu, complete genome 47509-47545 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KX130865 Shigella phage SHSML-52-1, complete genome 124332-124368 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MN850590 Escherichia phage moha, complete genome 30213-30249 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_041863 Escherichia coli O157 typing phage 3, complete genome 70728-70764 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_024124 Escherichia phage vB_EcoM_JS09, complete genome 90019-90055 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK047717 Escherichia phage p000v, complete genome 69614-69650 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK373778 Escherichia phage vB_EcoM_WFbE185, complete genome 80644-80680 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 LR027383 Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar007P3 genome assembly, chromosome: 1 36559-36595 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KU255730 Escherichia phage phiE142, complete genome 94292-94328 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KM407600 Shigella phage Shf125875, complete genome 80619-80655 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 LR027386 Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar008P4 genome assembly, chromosome: 1 19340-19376 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK962754 Shigella phage JK36, complete genome 81686-81722 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 LR027390 Escherichia virus vB_Eco_mar005P1 genome assembly, chromosome: 1 13673-13709 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 LR027387 Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar006P2 genome assembly, chromosome: 1 114568-114604 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KP869111 Escherichia coli O157 typing phage 13, partial genome 70877-70913 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK373775 Escherichia phage vB_EcoM_WFK, complete genome 75460-75496 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK373784 Escherichia phage vB_EcoM_MM02, complete genome 81502-81538 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_024794 Escherichia phage vB_EcoM_PhAPEC2, complete genome 80150-80186 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK962757 Shigella phage JK45, complete genome 81766-81802 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MN850651 Escherichia phage moskry, complete genome 90240-90276 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KP869104 Escherichia coli O157 typing phage 6, complete genome 89797-89833 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK962756 Shigella phage JK42, complete genome 81245-81281 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK524178 Escherichia phage PHB12, complete genome 140724-140760 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MG589383 Shigella phage phi25-307, complete genome 60430-60466 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK327933 Escherichia phage vB_EcoM_G2285, complete genome 78934-78970 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MH243438 Escherichia phage vB_EcoM_NBG1, complete genome 80595-80631 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MT782071 Escherichia phage JN02, complete genome 81149-81185 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK327943 Escherichia phage vB_EcoM_G53, complete genome 79526-79562 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK373782 Escherichia phage vB_EcoM_KAW3E185, complete genome 79548-79584 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK373774 Escherichia phage vB_EcoM_WFL6982, complete genome 75460-75496 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 MK327934 Escherichia phage vB_EcoM_G2469, complete genome 81122-81158 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 KM389388 UNVERIFIED: Escherichia phage CEV1 clone contig00003 genomic sequence 17910-17946 7 0.811
CP016104_2 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 1347624-1347660 37 NC_041920 UNVERIFIED: Escherichia phage HP3, complete genome 90159-90195 7 0.811
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_013164 Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence 111432-111466 7 0.8
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 72614-72642 7 0.759
CP016104_17 17.2|3642964|29|CP016104|CRT 3642964-3642992 29 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 73554-73582 7 0.759
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 NC_047754 Escherichia phage APCEc03, complete genome 42400-42428 7 0.759
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 NC_048853 Phage NBEco001, complete genome 97810-97838 7 0.759
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 NC_048855 Phage NBEco002, complete genome 98132-98160 7 0.759
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 AP019559 Escherichia phage SP15 DNA, complete genome 99561-99589 7 0.759
CP016104_17 17.12|3643549|29|CP016104|CRT 3643549-3643577 29 MN994502 Phage NBSal003, complete genome 19981-20009 7 0.759
CP016104_17 17.15|3643738|29|CP016104|CRT 3643738-3643766 29 MT375529 Pelagibacter phage Kolga EXVC01, complete genome 13770-13798 7 0.759
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NZ_KP791968 Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence 120022-120050 7 0.759
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 NC_019699 Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence 260685-260713 7 0.759
CP016104_17 17.18|3643882|29|CP016104|CRT 3643882-3643910 29 MG945320 UNVERIFIED: Microviridae sp. isolate 1616-1801, complete genome 2318-2346 7 0.759
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_010479 Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence 20261-20295 8 0.771
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MN694190 Marine virus AFVG_250M608, complete genome 31721-31755 8 0.771
CP016104_17 17.8|3643333|29|CP016104|CRT 3643333-3643361 29 MN480762 Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence 176923-176951 8 0.724
CP016104_15 15.1|3176216|31|CP016104|CRISPRCasFinder 3176216-3176246 31 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 444883-444913 9 0.71
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 54657-54691 10 0.714
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448791 Streptococcus phage Javan517, complete genome 40916-40950 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_004587 Streptococcus prophage 315.4, complete genome 40492-40526 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NC_003157 Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome 41762-41796 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448962 Streptococcus phage Javan496, complete genome 31763-31797 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448977 Streptococcus phage Javan530, complete genome 40397-40431 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448694 Streptococcus phage Javan179, complete genome 40365-40399 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448788 Streptococcus phage Javan511, complete genome 40397-40431 11 0.686
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 MK448950 Streptococcus phage Javan464, complete genome 41121-41155 11 0.686
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 NC_025449 Escherichia phage ECML-134, complete genome 64499-64535 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 KM607002 Enterobacteria phage RB55, complete genome 68097-68133 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 KJ477684 Enterobacteria phage T4 strain wild, complete genome 68134-68170 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 HM137666 Enterobacteria phage T4T, complete genome 68133-68169 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 NC_000866 Enterobacteria phage T4, complete genome 68154-68190 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 L13089 Bacteriophage T4 msp1-msp8 genes, complete cds's 2697-2733 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 KJ477686 Enterobacteria phage T4 strain GT7, complete genome 68132-68168 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 X57093 Bacteriophage T4 orfs between tRNA and e genes 238-274 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 KJ477685 Enterobacteria phage T4 strain 147, complete genome 66027-66063 11 0.703
CP016104_9 9.3|2690202|37|CP016104|PILER-CR 2690202-2690238 37 KM607003 Enterobacteria phage RB59, complete genome 68110-68146 11 0.703
CP016104_10 10.5|2777790|37|CP016104|PILER-CR,CRISPRCasFinder,CRT 2777790-2777826 37 MH622943 Myoviridae sp. isolate ctbc_4, complete genome 249981-250017 11 0.703
CP016104_17 17.3|3643018|47|CP016104|CRT 3643018-3643064 47 NZ_CP009336 Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence 90206-90252 14 0.702
CP016104_5 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT 1757635-1757669 35 NZ_CP043858 Arcobacter cibarius strain H743 plasmid pACIB, complete sequence 1619-1653 20 0.429

1. spacer 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

aatgtgattaaaaaaggacaaaagttggtgataccta	CRISPR spacer
aatgtgattaaaaaaggacaaaagttggtgataccta	Protospacer
*************************************

2. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagaatttc	Protospacer
*************************************

3. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagaatttc	Protospacer
*************************************

4. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagaatttc	Protospacer
*************************************

5. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagaatttc	Protospacer
*************************************

6. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagaatttc	Protospacer
*************************************

7. spacer 3.6|1557770|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

catatcagcacttccaagatttttattttctgaaat	CRISPR spacer
catatcagcacttccaagatttttattttctgaaat	Protospacer
************************************

8. spacer 3.9|1557967|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

aaagttaaatttattacatctaattctgtctcttcat	CRISPR spacer
aaagttaaatttattacatctaattctgtctcttcat	Protospacer
*************************************

9. spacer 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gcttgtttgactaagttagtcccccagcttatgacat	CRISPR spacer
gcttgtttgactaagttagtcccccagcttatgacat	Protospacer
*************************************

10. spacer 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gcttgtttgactaagttagtcccccagcttatgacat	CRISPR spacer
gcttgtttgactaagttagtcccccagcttatgacat	Protospacer
*************************************

11. spacer 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gcttgtttgactaagttagtcccccagcttatgacat	CRISPR spacer
gcttgtttgactaagttagtcccccagcttatgacat	Protospacer
*************************************

12. spacer 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

tatttactattttcacagtttaaagaagtatagtaac	CRISPR spacer
tatttactattttcacagtttaaagaagtatagtaac	Protospacer
*************************************

13. spacer 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

tatttactattttcacagtttaaagaagtatagtaac	CRISPR spacer
tatttactattttcacagtttaaagaagtatagtaac	Protospacer
*************************************

14. spacer 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

ctaacactaacactatttttattaatatttaacttcaa	CRISPR spacer
ctaacactaacactatttttattaatatttaacttcaa	Protospacer
**************************************

15. spacer 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

ctaacactaacactatttttattaatatttaacttcaa	CRISPR spacer
ctaacactaacactatttttattaatatttaacttcaa	Protospacer
**************************************

16. spacer 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

ctaacactaacactatttttattaatatttaacttcaa	CRISPR spacer
ctaacactaacactatttttattaatatttaacttcaa	Protospacer
**************************************

17. spacer 6.3|1758860|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

aatgcagaaaaatttgaaagttgggtatttgatgaag	CRISPR spacer
aatgcagaaaaatttgaaagttgggtatttgatgaag	Protospacer
*************************************

18. spacer 6.3|1758860|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

aatgcagaaaaatttgaaagttgggtatttgatgaag	CRISPR spacer
aatgcagaaaaatttgaaagttgggtatttgatgaag	Protospacer
*************************************

19. spacer 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

atgttcaattttgcatttgcacttgtagaccctgttg	CRISPR spacer
atgttcaattttgcatttgcacttgtagaccctgttg	Protospacer
*************************************

20. spacer 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

atgttcaattttgcatttgcacttgtagaccctgttg	CRISPR spacer
atgttcaattttgcatttgcacttgtagaccctgttg	Protospacer
*************************************

21. spacer 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

atgttcaattttgcatttgcacttgtagaccctgttg	CRISPR spacer
atgttcaattttgcatttgcacttgtagaccctgttg	Protospacer
*************************************

22. spacer 10.2|2777595|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

taaccatgtaactttcatgtaatttgtccaatatct	CRISPR spacer
taaccatgtaactttcatgtaatttgtccaatatct	Protospacer
************************************

23. spacer 10.12|2778250|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

aaggaaatagcatcaaatgctaaatcatgtcctaactg	CRISPR spacer
aaggaaatagcatcaaatgctaaatcatgtcctaactg	Protospacer
**************************************

24. spacer 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

aatgtgattaaaaaaggacaaaagttggtgataccta	CRISPR spacer
aatgtgattaaaaaaggacaaaagttggtgatacctt	Protospacer
************************************ 

25. spacer 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.972

gataaaataattgaatatgtagctttcgatatgtgt	CRISPR spacer
gataaaataattgaatatgtagcttttgatatgtgt	Protospacer
**************************.*********

26. spacer 3.4|1557637|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

aagagttttcttaaactaagaattgttttagaatttc	CRISPR spacer
aagagttttcttaaactaagaattgttttagagtttc	Protospacer
********************************.****

27. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatgtcaatatcaaggatacaaaattt	Protospacer
******************.*****************

28. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatgtcaatatcaaggatacaaaattt	Protospacer
******************.*****************

29. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.972

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatgtcaatatcaaggatacaaaattt	Protospacer
******************.*****************

30. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 1, identity: 0.972

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatgtcaatatcaaggatacaaaattt	Protospacer
******************.*****************

31. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 1, identity: 0.972

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatgtcaatatcaaggatacaaaattt	Protospacer
******************.*****************

32. spacer 5.6|1757896|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.973

tatttactattttcacagtttaaagaagtatagtaac	CRISPR spacer
tattcactattttcacagtttaaagaagtatagtaac	Protospacer
****.********************************

33. spacer 6.1|1758727|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.973

catttccaattacatcacctctatatctattctaaag	CRISPR spacer
catttccaactacatcacctctatatctattctaaag	Protospacer
*********.***************************

34. spacer 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

ctaacactaacactatttttattaatatttaacttcaa	CRISPR spacer
ctaacactgacactatttttattaatatttaacttcaa	Protospacer
********.*****************************

35. spacer 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 1, identity: 0.973

actccaaaattgaagtttataaaattgtaagtataag	CRISPR spacer
actccaaaattgaagtttatataattgtaagtataag	Protospacer
********************* ***************

36. spacer 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 1, identity: 0.973

actccaaaattgaagtttataaaattgtaagtataag	CRISPR spacer
actccaaaattgaagtttatataattgtaagtataag	Protospacer
********************* ***************

37. spacer 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 1, identity: 0.973

actccaaaattgaagtttataaaattgtaagtataag	CRISPR spacer
actccaaaattgaagtttatataattgtaagtataag	Protospacer
********************* ***************

38. spacer 6.6|1759058|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 1, identity: 0.973

actccaaaattgaagtttataaaattgtaagtataag	CRISPR spacer
actccaaaattgaagtttatataattgtaagtataag	Protospacer
********************* ***************

39. spacer 6.7|1759124|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

atgttcaattttgcatttgcacttgtagaccctgttg	CRISPR spacer
atattcaattttgcatttgcacttgtagaccctgttg	Protospacer
**.**********************************

40. spacer 10.12|2778250|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 1, identity: 0.974

aaggaaatagcatcaaatgctaaatcatgtcctaactg	CRISPR spacer
aaggaaatagcatctaatgctaaatcatgtcctaactg	Protospacer
************** ***********************

41. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

42. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

43. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

44. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

45. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

46. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

47. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

48. spacer 3.2|1557506|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.946

taatattttggaaatttaaatctaaatctatctcata	CRISPR spacer
tgatattttgaaaatttaaatctaaatctatctcata	Protospacer
*.********.**************************

49. spacer 4.2|1667446|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.946

atgttattacataaaaattcttcatctataactttaa	CRISPR spacer
atattattacataaaaattcttcgtctataactttaa	Protospacer
**.********************.*************

50. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.944

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattt	Protospacer
************.***********.***********

51. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.944

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattt	Protospacer
************.***********.***********

52. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.944

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattt	Protospacer
************.***********.***********

53. spacer 4.5|1667642|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.944

tatatattagatgtcaatgtcaaggatacaaaattt	CRISPR spacer
tatatattagatatcaatgtcaagaatacaaaattt	Protospacer
************.***********.***********

54. spacer 4.6|1667707|38|CP016104|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.947

ccatcttttgttgctttacataaatttatattacttac	CRISPR spacer
ccatcttttgttgctttgcatagatttatattacttac	Protospacer
*****************.****.***************

55. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.943

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
tgcagatttattactttttttataaaatttataag	Protospacer
****.*********************.********

56. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.943

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
tgcagatttattactttttttataaaatttataag	Protospacer
****.*********************.********

57. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.943

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
tgcatatttatcactttttttataaagtttataag	Protospacer
**** ******.***********************

58. spacer 5.3|1757699|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

gcttgtttgactaagttagtcccccagcttatgacat	CRISPR spacer
gcttgtttgactaagttagtcccccaacttataacat	Protospacer
**************************.*****.****

59. spacer 8.4|1894025|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 2, identity: 0.947

tttataacctttaattacacctcccatatcaccaccac	CRISPR spacer
cttgtaacctttaattacacctcccatatcaccaccac	Protospacer
.**.**********************************

60. spacer 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.946

gaaacaactgatgctataagaatttctataaatttaa	CRISPR spacer
gaaacaactgatactataagaatttctataaatttga	Protospacer
************.**********************.*

61. spacer 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.946

gaaacaactgatgctataagaatttctataaatttaa	CRISPR spacer
gaaacaactgatactataagaatttctataaatttga	Protospacer
************.**********************.*

62. spacer 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.946

gaaacaactgatgctataagaatttctataaatttaa	CRISPR spacer
gaaacaactgatactataagaatttctataaatttga	Protospacer
************.**********************.*

63. spacer 10.1|2777529|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.946

gaaacaactgatgctataagaatttctataaatttaa	CRISPR spacer
gaaacaactgatactataagaatttctataaatttga	Protospacer
************.**********************.*

64. spacer 10.6|2777856|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.946

ttgacccactcatggatgttattgttggagtagattt	CRISPR spacer
ttgacccactcatggatgttattgttggggtggattt	Protospacer
****************************.**.*****

65. spacer 10.13|2778317|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.944

actttttattggcaaaaccatgagataataatattg	CRISPR spacer
actttttattggtaaaaacatgagataataatattg	Protospacer
************.**** ******************

66. spacer 2.3|1347427|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.919

aatgtgattaaaaaaggacaaaagttggtgataccta	CRISPR spacer
aatataattaaaaaaggacaaaagttggtgatacctt	Protospacer
***.*.****************************** 

67. spacer 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.917

gataaaataattgaatatgtagctttcgatatgtgt	CRISPR spacer
gataaagtaattgaatatgtagcttttgatatgtgc	Protospacer
******.*******************.********.

68. spacer 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 3, identity: 0.917

gataaaataattgaatatgtagctttcgatatgtgt	CRISPR spacer
gataaagtaattgaatatgtagcttttgatatgtgc	Protospacer
******.*******************.********.

69. spacer 3.3|1557572|36|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 3, identity: 0.917

gataaaataattgaatatgtagctttcgatatgtgt	CRISPR spacer
gataaagtaattgaatatgtagcttttgatatgtgc	Protospacer
******.*******************.********.

70. spacer 3.5|1557703|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.921

ttaaatattttatttgatgtattatctccaaaaatatt	CRISPR spacer
gcaaatattttatttgatgtattatccccaaaaatatt	Protospacer
 .************************.***********

71. spacer 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.921

atcgccttccagattacttttgtatatgaggtcagcaa	CRISPR spacer
gtcgccttccaggttacttttatatatgaggtcagcaa	Protospacer
.***********.********.****************

72. spacer 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.921

atcgccttccagattacttttgtatatgaggtcagcaa	CRISPR spacer
gtcgccttccaggttacttttatatatgaggtcagcaa	Protospacer
.***********.********.****************

73. spacer 5.7|1757962|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.921

atcgccttccagattacttttgtatatgaggtcagcaa	CRISPR spacer
gtcgccttccaggttacttttatatatgaggtcagcaa	Protospacer
.***********.********.****************

74. spacer 17.20|3643981|29|CP016104|CRT matches to NZ_CP053933 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.897

tgttggacctgttattccatttgctcccg	CRISPR spacer
agttggacctgttattcctgttgctcccg	Protospacer
 *****************  *********

75. spacer 17.20|3643981|29|CP016104|CRT matches to NZ_CP053936 (Bacillus thuringiensis strain FDAARGOS_794 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.897

tgttggacctgttattccatttgctcccg	CRISPR spacer
agttggacctgttattcctgttgctcccg	Protospacer
 *****************  *********

76. spacer 17.20|3643981|29|CP016104|CRT matches to NZ_CP009718 (Bacillus thuringiensis strain HD682 plasmid pBGN_2, complete sequence) position: , mismatch: 3, identity: 0.897

tgttggacctgttattccatttgctcccg	CRISPR spacer
agttggacctgttattcctgttgctcccg	Protospacer
 *****************  *********

77. spacer 6.2|1758793|38|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 4, identity: 0.895

ctaacactaacactatttttattaatatttaacttcaa	CRISPR spacer
cttatgctaacactatttttattaatatttaactttaa	Protospacer
** *..*****************************.**

78. spacer 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 4, identity: 0.892

actaaaggagtttctttgttctttatgctctacaact	CRISPR spacer
actgtgagagtttctttgttctttatgctctacaact	Protospacer
***. ..******************************

79. spacer 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 4, identity: 0.892

actaaaggagtttctttgttctttatgctctacaact	CRISPR spacer
actgtgagagtttctttgttctttatgctctacaact	Protospacer
***. ..******************************

80. spacer 6.10|1759322|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 4, identity: 0.892

actaaaggagtttctttgttctttatgctctacaact	CRISPR spacer
actgtgagagtttctttgttctttatgctctacaact	Protospacer
***. ..******************************

81. spacer 17.15|3643738|29|CP016104|CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 4, identity: 0.862

tgttggacctgtagaacctgttattccat	CRISPR spacer
agtaggacctgtaggacctgttattccaa	Protospacer
 ** **********.************* 

82. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 4, identity: 0.862

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggacctgttgaacctgttgggccct	Protospacer
************ **********  ** *

83. spacer 17.18|3643882|29|CP016104|CRT matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 4, identity: 0.862

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tggagaacctgaagaacctgttgttccat	Protospacer
**  *.***** *****************

84. spacer 17.2|3642964|29|CP016104|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.828

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgttactcctgttgctcccgttgctcctg	Protospacer
.*.******  *****************.

85. spacer 17.2|3642964|29|CP016104|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 5, identity: 0.828

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgttactcctgttgctcccgttgctcctg	Protospacer
.*.******  *****************.

86. spacer 17.2|3642964|29|CP016104|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 5, identity: 0.828

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgttactcctgttgctcccgttgctcctg	Protospacer
.*.******  *****************.

87. spacer 17.2|3642964|29|CP016104|CRT matches to MG209611 (Aphanizomenon phage vB_AphaS-CL131, complete genome) position: , mismatch: 5, identity: 0.828

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgttgctcccgttgctcccgttgctccta	Protospacer
.*.*.****  ******************

88. spacer 17.12|3643549|29|CP016104|CRT matches to MN693631 (Marine virus AFVG_250M1143, complete genome) position: , mismatch: 5, identity: 0.828

tattgg--tcctgtagcacctgttactccat	CRISPR spacer
--ttgatctcctgtagcaagtgttactccat	Protospacer
  ***.  **********  ***********

89. spacer 17.15|3643738|29|CP016104|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 5, identity: 0.828

tgttggacctgtagaacctgttattccat	CRISPR spacer
tgttggacctgttgaacctgttgggccct	Protospacer
************ *********.  ** *

90. spacer 17.15|3643738|29|CP016104|CRT matches to MN693300 (Marine virus AFVG_25M71, complete genome) position: , mismatch: 5, identity: 0.828

tgttg-gacctgtagaacctgttattccat	CRISPR spacer
-attgtaacctgtagaacctgttatttcaa	Protospacer
 .*** .*******************.** 

91. spacer 17.15|3643738|29|CP016104|CRT matches to MN693380 (Marine virus AFVG_25M72, complete genome) position: , mismatch: 5, identity: 0.828

tgttg-gacctgtagaacctgttattccat	CRISPR spacer
-attgtaacctgtagaacctgttatttcaa	Protospacer
 .*** .*******************.** 

92. spacer 17.15|3643738|29|CP016104|CRT matches to MK614706 (Gammaproteobacteria virus GOV_bin_2604, complete genome) position: , mismatch: 5, identity: 0.828

tgttggacctgtagaacctgttattccat	CRISPR spacer
tggagaacctgaagaacctgttgttccat	Protospacer
**  *.***** **********.******

93. spacer 17.18|3643882|29|CP016104|CRT matches to NC_047707 (Uncultured phage_MedDCM-OCT-S38-C3 DNA, complete genome, group G9, isolate: uvMED-CGR-U-MedDCM-OCT-S38-C3) position: , mismatch: 5, identity: 0.828

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggacctgaaggacctgttgttggag	Protospacer
*********** **.**********  * 

94. spacer 17.2|3642964|29|CP016104|CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 6, identity: 0.793

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgtcactcctgttgctcccgttgctcctg	Protospacer
.*..*****  *****************.

95. spacer 17.2|3642964|29|CP016104|CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 6, identity: 0.793

tgctactccatttgctcccgttgctccta	CRISPR spacer
cgtcactcctgttgctcccgttgctcctg	Protospacer
.*..*****  *****************.

96. spacer 17.12|3643549|29|CP016104|CRT matches to MN693968 (Marine virus AFVG_250M909, complete genome) position: , mismatch: 6, identity: 0.793

tattggtcctgtagcacctgttactccat	CRISPR spacer
agtaggtcctgtagaacctgttgctccag	Protospacer
 .* ********** *******.***** 

97. spacer 17.18|3643882|29|CP016104|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggtcctgttgaacctgttgaacctg	Protospacer
****** ***** **********  **  

98. spacer 17.18|3643882|29|CP016104|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

99. spacer 17.18|3643882|29|CP016104|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggtcctgttgaacctgttgaacctg	Protospacer
****** ***** **********  **  

100. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

101. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

102. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

103. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

104. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

105. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

106. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

107. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

108. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

109. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

110. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgaacctg	Protospacer
*****.****** **********  **  

111. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggacctgttggacctgttggacctg	Protospacer
************ *.********  **  

112. spacer 17.18|3643882|29|CP016104|CRT matches to CP024687 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-3-257K, complete sequence) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttggacctgttggacctgttggaccgg	Protospacer
************ *.********  **. 

113. spacer 17.18|3643882|29|CP016104|CRT matches to MN694558 (Marine virus AFVG_250M9, complete genome) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgtcggccctgtagaacctgttggccctg	Protospacer
***.** **************** .**  

114. spacer 17.18|3643882|29|CP016104|CRT matches to MN694640 (Marine virus AFVG_250M10, complete genome) position: , mismatch: 6, identity: 0.793

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgtcggccctgtagaacctgttggccctg	Protospacer
***.** **************** .**  

115. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN864145 (Escherichia phage F2, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

116. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN850579 (Escherichia phage mogra, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

117. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KT184309 (Enterobacteria phage ATK47, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

118. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MT446423 (UNVERIFIED: Escherichia virus TH58, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

119. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LR027391 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar009P5 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

120. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK047718 (Escherichia phage p000y, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

121. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KT184310 (Enterobacteria phage ATK48, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

122. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK639187 (Shigella phage SSE1, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

123. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_018855 (Enterobacteria phage HX01, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

124. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_041990 (Escherichia phage ST0, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

125. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KR422352 (Escherichia phage APCEc01, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

126. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MT446390 (UNVERIFIED: Escherichia virus TH12, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

127. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN850622 (Escherichia phage mobillu, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

128. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KX130865 (Shigella phage SHSML-52-1, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

129. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN850590 (Escherichia phage moha, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

130. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_041863 (Escherichia coli O157 typing phage 3, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

131. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_024124 (Escherichia phage vB_EcoM_JS09, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

132. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK047717 (Escherichia phage p000v, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

133. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK373778 (Escherichia phage vB_EcoM_WFbE185, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

134. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LR027383 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar007P3 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

135. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KU255730 (Escherichia phage phiE142, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

136. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KM407600 (Shigella phage Shf125875, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

137. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LR027386 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar008P4 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

138. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK962754 (Shigella phage JK36, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

139. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LR027390 (Escherichia virus vB_Eco_mar005P1 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

140. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to LR027387 (Escherichia virus vB_Eco_mar005P1 strain vB_Eco_mar006P2 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

141. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KP869111 (Escherichia coli O157 typing phage 13, partial genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

142. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK373775 (Escherichia phage vB_EcoM_WFK, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

143. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK373784 (Escherichia phage vB_EcoM_MM02, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

144. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_024794 (Escherichia phage vB_EcoM_PhAPEC2, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

145. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK962757 (Shigella phage JK45, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

146. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN850651 (Escherichia phage moskry, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

147. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KP869104 (Escherichia coli O157 typing phage 6, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

148. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK962756 (Shigella phage JK42, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

149. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK524178 (Escherichia phage PHB12, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

150. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MG589383 (Shigella phage phi25-307, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

151. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK327933 (Escherichia phage vB_EcoM_G2285, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

152. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MH243438 (Escherichia phage vB_EcoM_NBG1, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

153. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MT782071 (Escherichia phage JN02, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

154. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK327943 (Escherichia phage vB_EcoM_G53, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

155. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK373782 (Escherichia phage vB_EcoM_KAW3E185, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

156. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK373774 (Escherichia phage vB_EcoM_WFL6982, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

157. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK327934 (Escherichia phage vB_EcoM_G2469, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

158. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to KM389388 (UNVERIFIED: Escherichia phage CEV1 clone contig00003 genomic sequence) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

159. spacer 2.6|1347624|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_041920 (UNVERIFIED: Escherichia phage HP3, complete genome) position: , mismatch: 7, identity: 0.811

tttatatcttcttttgtaacattttttatagttattt-----	CRISPR spacer
tttatatcttcttttgcaacaatttttat-----tttacgaa	Protospacer
****************.**** *******     ***     

160. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_013164 (Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence) position: , mismatch: 7, identity: 0.8

---tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atatacaaa---atttccttttttataaagtttataat	Protospacer
   *.****   *** *.******************* 

161. spacer 17.2|3642964|29|CP016104|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.759

tgctactccatttgctcccgttgctccta	CRISPR spacer
aattgctccgattgctcccgttgctcctg	Protospacer
 ..*.****. *****************.

162. spacer 17.2|3642964|29|CP016104|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.759

tgctactccatttgctcccgttgctccta	CRISPR spacer
ggtcgctcccgttgctcccgttgctcctt	Protospacer
 *...****  ***************** 

163. spacer 17.12|3643549|29|CP016104|CRT matches to NC_047754 (Escherichia phage APCEc03, complete genome) position: , mismatch: 7, identity: 0.759

tattggtcctgtagcacctgttactccat	CRISPR spacer
aaaacgtcctgaagcacctgttactgcac	Protospacer
 *   ****** ************* **.

164. spacer 17.12|3643549|29|CP016104|CRT matches to NC_048853 (Phage NBEco001, complete genome) position: , mismatch: 7, identity: 0.759

tattggtcctgtagcacctgttactccat	CRISPR spacer
aaaacgtcctgaagcacctgttactgcac	Protospacer
 *   ****** ************* **.

165. spacer 17.12|3643549|29|CP016104|CRT matches to NC_048855 (Phage NBEco002, complete genome) position: , mismatch: 7, identity: 0.759

tattggtcctgtagcacctgttactccat	CRISPR spacer
aaaacgtcctgaagcacctgttactgcac	Protospacer
 *   ****** ************* **.

166. spacer 17.12|3643549|29|CP016104|CRT matches to AP019559 (Escherichia phage SP15 DNA, complete genome) position: , mismatch: 7, identity: 0.759

tattggtcctgtagcacctgttactccat	CRISPR spacer
aaaacgtcctgaagcacctgttactgcac	Protospacer
 *   ****** ************* **.

167. spacer 17.12|3643549|29|CP016104|CRT matches to MN994502 (Phage NBSal003, complete genome) position: , mismatch: 7, identity: 0.759

tattggtcctgtagcacctgttactccat	CRISPR spacer
aaaacgtcctgaagcacctgttactgcac	Protospacer
 *   ****** ************* **.

168. spacer 17.15|3643738|29|CP016104|CRT matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 7, identity: 0.759

tgttggacctgtagaacctgttattccat	CRISPR spacer
agttgggcctgttgaacctgttattgatg	Protospacer
 *****.***** ************    

169. spacer 17.18|3643882|29|CP016104|CRT matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 7, identity: 0.759

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgttgaacctgttgattatg	Protospacer
*****.****** ********** *.   

170. spacer 17.18|3643882|29|CP016104|CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 7, identity: 0.759

tgttggacctgtagaacctgttgttccat	CRISPR spacer
agttggagctgtagatcctgttgtattag	Protospacer
 ****** ******* ******** ..* 

171. spacer 17.18|3643882|29|CP016104|CRT matches to MG945320 (UNVERIFIED: Microviridae sp. isolate 1616-1801, complete genome) position: , mismatch: 7, identity: 0.759

tgttggacctgtagaacctgttgttccat	CRISPR spacer
tgttgaacctgtcgaacctgttgagtcta	Protospacer
*****.****** **********  .*  

172. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_010479 (Synechococcus sp. PCC 7002 plasmid pAQ5, complete sequence) position: , mismatch: 8, identity: 0.771

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
cacaagaatattattttttttataaagattataat	Protospacer
..***.  *****.************* ****** 

173. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 8, identity: 0.771

tgcaaatt--tattactttttttataaagtttataag	CRISPR spacer
--gaaatcaaaattactttttttataaaggttttaaa	Protospacer
   ****.   ****************** ** ***.

174. spacer 17.8|3643333|29|CP016104|CRT matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 8, identity: 0.724

taccaaaccatttgctcccgttgctcctg	CRISPR spacer
taccaaaccagttgctcccgtaaccaaga	Protospacer
********** ********** .*.   .

175. spacer 15.1|3176216|31|CP016104|CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 9, identity: 0.71

cactatctctggtattggcggatttatcata	CRISPR spacer
cgagcaacttggtattggcggatttatgata	Protospacer
*.     ..****************** ***

176. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 10, identity: 0.714

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
tttttcctctttaatttttttataaattttataag	Protospacer
* .   .*. *** ************ ********

177. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

178. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

179. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

180. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

181. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

182. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

183. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

184. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 11, identity: 0.686

tgcaaatttattactttttttataaagtttataag	CRISPR spacer
atagtatttattacttttttcataaattttctcca	Protospacer
   . ***************.***** *** *  .

185. spacer 9.3|2690202|37|CP016104|PILER-CR matches to NC_025449 (Escherichia phage ECML-134, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cactccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

186. spacer 9.3|2690202|37|CP016104|PILER-CR matches to KM607002 (Enterobacteria phage RB55, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

187. spacer 9.3|2690202|37|CP016104|PILER-CR matches to KJ477684 (Enterobacteria phage T4 strain wild, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

188. spacer 9.3|2690202|37|CP016104|PILER-CR matches to HM137666 (Enterobacteria phage T4T, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

189. spacer 9.3|2690202|37|CP016104|PILER-CR matches to NC_000866 (Enterobacteria phage T4, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

190. spacer 9.3|2690202|37|CP016104|PILER-CR matches to L13089 (Bacteriophage T4 msp1-msp8 genes, complete cds's) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

191. spacer 9.3|2690202|37|CP016104|PILER-CR matches to KJ477686 (Enterobacteria phage T4 strain GT7, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

192. spacer 9.3|2690202|37|CP016104|PILER-CR matches to X57093 (Bacteriophage T4 orfs between tRNA and e genes) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

193. spacer 9.3|2690202|37|CP016104|PILER-CR matches to KJ477685 (Enterobacteria phage T4 strain 147, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

194. spacer 9.3|2690202|37|CP016104|PILER-CR matches to KM607003 (Enterobacteria phage RB59, complete genome) position: , mismatch: 11, identity: 0.703

ataataaaacttctattatatctactatatcaatatt	CRISPR spacer
cgctccaaacttctattatatctactgtaccactgat	Protospacer
    . ********************.**.** *. *

195. spacer 10.5|2777790|37|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 11, identity: 0.703

tagaacttgaaaagtattcttatgaagttaaatagaa	CRISPR spacer
aaagtattgaaaaatattcttatgatgttaaatttgg	Protospacer
 *..  *******.*********** *******  ..

196. spacer 17.3|3643018|47|CP016104|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 14, identity: 0.702

atttgcccctgttgctcctgttgctcctgtagctcctgctactccat---------	CRISPR spacer
---------tgttgctcctgttgctcctgttgctcctgttgctcctccagcaggtc	Protospacer
         ********************* *******.*.**** .         

197. spacer 5.2|1757635|35|CP016104|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 20, identity: 0.429

tgcaaatttattactttttttataaagtttataag------------------	CRISPR spacer
------------------cttataaagtttataaaaaatgtaaaataagtata	Protospacer
                  .***************.                  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 277036 : 293217 14 Synechococcus_phage(23.08%) NA NA
DBSCAN-SWA_2 662412 : 706408 34 Streptococcus_phage(22.22%) coat,transposase,tRNA NA
DBSCAN-SWA_3 781268 : 852556 57 Bacillus_phage(23.53%) tRNA,transposase,protease NA
DBSCAN-SWA_4 1482106 : 1506485 29 Clostridium_phage(54.55%) tail NA
DBSCAN-SWA_5 1588223 : 1597952 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_6 1723415 : 1779990 70 Clostridium_phage(84.75%) head,portal,tail,capsid,terminase,holin NA
DBSCAN-SWA_7 2103853 : 2110045 8 Clostridium_phage(33.33%) transposase NA
DBSCAN-SWA_8 2518875 : 2530657 13 Clostridium_phage(83.33%) tail NA
DBSCAN-SWA_9 3090342 : 3099295 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_10 3711379 : 3765011 52 Agrobacterium_phage(22.22%) protease NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
CP016104.1|AXU51560.1|3746492_3746708_-|hypothetical-protein 3746492_3746708_- 71 aa aa NA NA NA 3711379-3765011 yes