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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP012309 Clostridioides difficile strain DSM 28668 chromosome, complete genome 17 crisprs csa3,WYL,cas3,DEDDh,cas14j,DinG,cas14k,c2c9_V-U4,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2 4 50 9 0

Results visualization

1. CP012309
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_1 17863-17952 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_2 138113-138199 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_3 146710-146788 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_4 154239-154323 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_5 572206-572530 Orphan NA
6 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_6 1112547-1112635 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_7 1311260-1312010 Orphan I-A
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_8 1523898-1526179 Orphan I-A
34 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_9 1637482-1638629 TypeV I-A
17 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_10 1726531-1726691 Orphan I-A
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_11 1875709-1876591 Orphan I-A
13 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_12 2189084-2189375 Orphan I-A
4 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_13 2240400-2242001 Orphan I-A
24 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_14 2600653-2601339 TypeV-U4 I-A
10 spacers
c2c9_V-U4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_15 2765900-2766057 Unclear NA
2 spacers
cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_16 2847332-2847503 Orphan I-A
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP012309_21 3362887-3365008 Unclear I-A
32 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 12436-12469 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 32125-32158 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 131190-131223 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 148750-148783 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 1112512-1112545 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 3934454-3934487 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 CP012309.1 4074816-4074849 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 12438-12474 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 32127-32163 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 131192-131228 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 148752-148788 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 1112514-1112550 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 3934449-3934485 0 1.0
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 CP012309.1 4074811-4074847 0 1.0
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 CP012309.1 12431-12469 0 1.0
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 CP012309.1 131185-131223 0 1.0
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 CP012309.1 148745-148783 0 1.0
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 CP012309.1 3934454-3934492 0 1.0
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 CP012309.1 4074816-4074854 0 1.0
CP012309_6 6.1|1112574|35|CP012309|CRISPRCasFinder 1112574-1112608 35 CP012309.1 131252-131286 0 1.0
CP012309_6 6.1|1112574|35|CP012309|CRISPRCasFinder 1112574-1112608 35 CP012309.1 3091875-3091909 0 1.0
CP012309_6 6.1|1112574|35|CP012309|CRISPRCasFinder 1112574-1112608 35 CP012309.1 138198-138232 1 0.971
CP012309_6 6.1|1112574|35|CP012309|CRISPRCasFinder 1112574-1112608 35 CP012309.1 148812-148846 1 0.971

1. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 12436-12469, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

2. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 32125-32158, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

3. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 131190-131223, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

4. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 148750-148783, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

5. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 1112512-1112545, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

6. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 3934454-3934487, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

7. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to position: 4074816-4074849, mismatch: 0, identity: 1.0

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
**********************************

8. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 12438-12474, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

9. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 32127-32163, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

10. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 131192-131228, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

11. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 148752-148788, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

12. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 1112514-1112550, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

13. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 3934449-3934485, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

14. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to position: 4074811-4074847, mismatch: 0, identity: 1.0

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacgcatgtgaagtttgtttgttggcgctgtgc	Protospacer
*************************************

15. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to position: 12431-12469, mismatch: 0, identity: 1.0

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
***************************************

16. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to position: 131185-131223, mismatch: 0, identity: 1.0

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
***************************************

17. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to position: 148745-148783, mismatch: 0, identity: 1.0

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
***************************************

18. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to position: 3934454-3934492, mismatch: 0, identity: 1.0

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
***************************************

19. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to position: 4074816-4074854, mismatch: 0, identity: 1.0

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacgcatgtgaagtttgtttgttggcgc	Protospacer
***************************************

20. spacer 6.1|1112574|35|CP012309|CRISPRCasFinder matches to position: 131252-131286, mismatch: 0, identity: 1.0

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatctgagtgaatacgaaggttgttcgttgacgtg	Protospacer
***********************************

21. spacer 6.1|1112574|35|CP012309|CRISPRCasFinder matches to position: 3091875-3091909, mismatch: 0, identity: 1.0

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatctgagtgaatacgaaggttgttcgttgacgtg	Protospacer
***********************************

22. spacer 6.1|1112574|35|CP012309|CRISPRCasFinder matches to position: 138198-138232, mismatch: 1, identity: 0.971

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatcttagtgaatacgaaggttgttcgttgacgtg	Protospacer
***** *****************************

23. spacer 6.1|1112574|35|CP012309|CRISPRCasFinder matches to position: 148812-148846, mismatch: 1, identity: 0.971

aatctgagtgaatacgaaggttgttcgttgacgtg	CRISPR spacer
aatcttagtgaatacgaaggttgttcgttgacgtg	Protospacer
***** *****************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP012309_3 3.1|146735|29|CP012309|CRISPRCasFinder 146735-146763 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 LN681539 Clostridium phage phiCD505, complete genome 48149-48186 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 LN681542 Clostridium phage phiMMP03, complete genome 49909-49946 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 NC_009231 Clostridium phage phiC2, complete genome 53447-53484 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 JX145341 Clostridium phage phiMMP02, complete genome 47251-47288 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 NC_048642 Clostridium phage CDKM9, complete genome 48593-48630 0 1.0
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 KX228400 Clostridium phage CDKM15, complete genome 49495-49532 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 LN681539 Clostridium phage phiCD505, complete genome 48149-48186 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 LN681542 Clostridium phage phiMMP03, complete genome 49909-49946 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 NC_009231 Clostridium phage phiC2, complete genome 53447-53484 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 JX145341 Clostridium phage phiMMP02, complete genome 47251-47288 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 NC_048642 Clostridium phage CDKM9, complete genome 48593-48630 0 1.0
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 KX228400 Clostridium phage CDKM15, complete genome 49495-49532 0 1.0
CP012309_9 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT 1637970-1638006 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 1094-1130 0 1.0
CP012309_9 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT 1637970-1638006 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 120870-120906 0 1.0
CP012309_9 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT 1637970-1638006 37 LN681537 Clostridium phage phiCD211, complete genome 129732-129768 0 1.0
CP012309_11 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875804-1875840 37 LN881738 Escherichia phage slur17, complete genome 4257-4293 0 1.0
CP012309_11 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875804-1875840 37 KU057941 Clostridium phage CDSH1, complete genome 16144-16180 0 1.0
CP012309_11 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875804-1875840 37 HM568888 Clostridium phage phiCD38-2, complete genome 15640-15676 0 1.0
CP012309_11 11.3|1875870|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875870-1875905 36 HM568888 Clostridium phage phiCD38-2, complete genome 2276-2311 0 1.0
CP012309_11 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876263-1876298 36 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 1856-1891 0 1.0
CP012309_11 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876263-1876298 36 MF547662 Clostridioides phage LIBA6276, complete genome 90641-90676 0 1.0
CP012309_11 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876263-1876298 36 MF547663 Clostridioides phage LIBA2945, complete genome 89181-89216 0 1.0
CP012309_11 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876328-1876364 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 97656-97692 0 1.0
CP012309_11 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876328-1876364 37 MF547662 Clostridioides phage LIBA6276, complete genome 51509-51545 0 1.0
CP012309_11 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876328-1876364 37 MF547663 Clostridioides phage LIBA2945, complete genome 51359-51395 0 1.0
CP012309_13 13.5|2240686|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240686-2240723 38 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 66583-66620 0 1.0
CP012309_14 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601009-2601046 38 LN881738 Escherichia phage slur17, complete genome 792-829 0 1.0
CP012309_14 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601009-2601046 38 KU057941 Clostridium phage CDSH1, complete genome 19608-19645 0 1.0
CP012309_14 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601009-2601046 38 HM568888 Clostridium phage phiCD38-2, complete genome 19104-19141 0 1.0
CP012309_14 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601009-2601046 38 NC_028958 Clostridium phage phiCD146, complete genome 19113-19150 0 1.0
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 LN881738 Escherichia phage slur17, complete genome 25535-25569 0 1.0
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 KU057941 Clostridium phage CDSH1, complete genome 36487-36521 0 1.0
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 NC_028905 Clostridium phage phiCD111, complete genome 36051-36085 0 1.0
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 HM568888 Clostridium phage phiCD38-2, complete genome 35985-36019 0 1.0
CP012309_21 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363764-3363799 36 NZ_MG019959 Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence 475-510 0 1.0
CP012309_21 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363764-3363799 36 NZ_MG019961 Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence 479-514 0 1.0
CP012309_21 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363764-3363799 36 NZ_MG019962 Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence 475-510 0 1.0
CP012309_21 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363764-3363799 36 NZ_MG019960 Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence 475-510 0 1.0
CP012309_1 1.1|17891|34|CP012309|CRISPRCasFinder 17891-17924 34 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3119 1 0.971
CP012309_2 2.1|138138|37|CP012309|CRISPRCasFinder 138138-138174 37 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3081-3117 1 0.973
CP012309_4 4.1|154262|39|CP012309|CRISPRCasFinder 154262-154300 39 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 3086-3124 1 0.974
CP012309_8 8.3|1524059|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524059-1524095 37 GU949551 Clostridium phage phiCD6356, complete genome 14170-14206 1 0.973
CP012309_8 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524322-1524358 37 NC_048665 Clostridium phage phiCDHM14, complete genome 3892-3928 1 0.973
CP012309_8 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524322-1524358 37 HG796225 Clostridium phage phiCDHM13 complete genome 3892-3928 1 0.973
CP012309_8 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524322-1524358 37 HG798901 Clostridium phage phiCDHM11 complete genome 3892-3928 1 0.973
CP012309_8 8.20|1525185|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525185-1525221 37 GU949551 Clostridium phage phiCD6356, complete genome 14170-14206 1 0.973
CP012309_8 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525448-1525484 37 NC_048665 Clostridium phage phiCDHM14, complete genome 3892-3928 1 0.973
CP012309_8 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525448-1525484 37 HG796225 Clostridium phage phiCDHM13 complete genome 3892-3928 1 0.973
CP012309_8 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525448-1525484 37 HG798901 Clostridium phage phiCDHM11 complete genome 3892-3928 1 0.973
CP012309_9 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT 1637970-1638006 37 MF547662 Clostridioides phage LIBA6276, complete genome 122145-122181 1 0.973
CP012309_9 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT 1637970-1638006 37 MF547663 Clostridioides phage LIBA2945, complete genome 120408-120444 1 0.973
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_MG019959 Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence 425-462 1 0.974
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_MG019961 Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence 429-466 1 0.974
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_MG019962 Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence 425-462 1 0.974
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_MG019960 Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence 425-462 1 0.974
CP012309_9 9.13|1638301|37|CP012309|CRISPRCasFinder,CRT 1638301-1638337 37 GU949551 Clostridium phage phiCD6356, complete genome 4081-4117 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 38452-38488 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 NC_007917 Clostridium phage phi CD119, complete genome 38452-38488 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 LN681542 Clostridium phage phiMMP03, complete genome 41194-41230 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 NC_009231 Clostridium phage phiC2, complete genome 44731-44767 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 JX145341 Clostridium phage phiMMP02, complete genome 39376-39412 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 LN681541 Clostridium phage phiMMP01, complete genome 37493-37529 1 0.973
CP012309_11 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876131-1876167 37 KX228400 Clostridium phage CDKM15, complete genome 41716-41752 1 0.973
CP012309_11 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876197-1876233 37 KU057941 Clostridium phage CDSH1, complete genome 15346-15382 1 0.973
CP012309_11 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876197-1876233 37 HM568888 Clostridium phage phiCD38-2, complete genome 14842-14878 1 0.973
CP012309_11 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876197-1876233 37 LN881738 Escherichia phage slur17, complete genome 5055-5091 1 0.973
CP012309_13 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240820-2240857 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 104917-104954 1 0.974
CP012309_13 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240820-2240857 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 17046-17083 1 0.974
CP012309_13 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240820-2240857 38 LN681537 Clostridium phage phiCD211, complete genome 25908-25945 1 0.974
CP012309_13 13.18|2241544|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241544-2241578 35 NC_028905 Clostridium phage phiCD111, complete genome 30751-30785 1 0.971
CP012309_13 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241673-2241710 38 KU057941 Clostridium phage CDSH1, complete genome 30871-30908 1 0.974
CP012309_13 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241673-2241710 38 LN881738 Escherichia phage slur17, complete genome 31148-31185 1 0.974
CP012309_13 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241673-2241710 38 HM568888 Clostridium phage phiCD38-2, complete genome 30363-30400 1 0.974
CP012309_14 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601009-2601046 38 NC_028905 Clostridium phage phiCD111, complete genome 19576-19613 1 0.974
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 NC_028958 Clostridium phage phiCD146, complete genome 35500-35534 1 0.971
CP012309_7 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1311946-1311981 36 NC_028996 Clostridium phage phiCDHM19, complete genome 34840-34875 2 0.944
CP012309_9 9.10|1638103|37|CP012309|CRISPRCasFinder,CRT 1638103-1638139 37 GU949551 Clostridium phage phiCD6356, complete genome 17802-17838 2 0.946
CP012309_9 9.16|1638497|37|CP012309|CRISPRCasFinder,CRT 1638497-1638533 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 102058-102094 2 0.946
CP012309_9 9.17|1638563|38|CP012309|CRISPRCasFinder,CRT 1638563-1638600 38 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 94861-94898 2 0.947
CP012309_11 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875804-1875840 37 NC_028958 Clostridium phage phiCD146, complete genome 15649-15685 2 0.946
CP012309_11 11.3|1875870|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875870-1875905 36 NC_028958 Clostridium phage phiCD146, complete genome 2281-2316 2 0.944
CP012309_11 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1876197-1876233 37 NC_028958 Clostridium phage phiCD146, complete genome 14851-14887 2 0.946
CP012309_12 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT 2189113-2189149 37 KU057941 Clostridium phage CDSH1, complete genome 4452-4488 2 0.946
CP012309_12 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT 2189113-2189149 37 NC_028958 Clostridium phage phiCD146, complete genome 4485-4521 2 0.946
CP012309_12 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT 2189113-2189149 37 LN680008 Clostridium phage phiCDHS1 gp04 gene for putative capsid protein 1022-1058 2 0.946
CP012309_12 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT 2189113-2189149 37 LN881738 Escherichia phage slur17, complete genome 15949-15985 2 0.946
CP012309_12 12.5|2189114|37|CP012309|PILER-CR 2189114-2189150 37 KU057941 Clostridium phage CDSH1, complete genome 4452-4488 2 0.946
CP012309_12 12.5|2189114|37|CP012309|PILER-CR 2189114-2189150 37 NC_028958 Clostridium phage phiCD146, complete genome 4485-4521 2 0.946
CP012309_12 12.5|2189114|37|CP012309|PILER-CR 2189114-2189150 37 LN680008 Clostridium phage phiCDHS1 gp04 gene for putative capsid protein 1022-1058 2 0.946
CP012309_12 12.5|2189114|37|CP012309|PILER-CR 2189114-2189150 37 LN881738 Escherichia phage slur17, complete genome 15949-15985 2 0.946
CP012309_13 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240820-2240857 38 MF547662 Clostridioides phage LIBA6276, complete genome 24386-24423 2 0.947
CP012309_13 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2240820-2240857 38 MF547663 Clostridioides phage LIBA2945, complete genome 24386-24423 2 0.947
CP012309_14 14.1|2600682|36|CP012309|CRISPRCasFinder,CRT 2600682-2600717 36 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22167 2 0.944
CP012309_7 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1311946-1311981 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 31152-31187 3 0.917
CP012309_7 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT 1311946-1311981 36 NC_007917 Clostridium phage phi CD119, complete genome 31152-31187 3 0.917
CP012309_11 11.1|1875738|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1875738-1875774 37 NC_028958 Clostridium phage phiCD146, complete genome 39661-39697 3 0.919
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP014419 Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence 14287-14316 3 0.9
CP012309_13 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241673-2241710 38 GU949551 Clostridium phage phiCD6356, complete genome 26150-26187 3 0.921
CP012309_13 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241673-2241710 38 NC_028905 Clostridium phage phiCD111, complete genome 30665-30702 3 0.921
CP012309_16 16.2|2847452|23|CP012309|PILER-CR 2847452-2847474 23 KJ489400 Bacillus phage Hoody T, complete genome 75255-75277 3 0.87
CP012309_16 16.2|2847452|23|CP012309|PILER-CR 2847452-2847474 23 MK215646 Bacillus phage vB_BthM-Goe5, complete genome 74409-74431 3 0.87
CP012309_16 16.2|2847452|23|CP012309|PILER-CR 2847452-2847474 23 KU737346 Bacillus phage Vinny, complete genome 75774-75796 3 0.87
CP012309_16 16.2|2847452|23|CP012309|PILER-CR 2847452-2847474 23 NC_024207 Bacillus phage Evoli, complete genome 75169-75191 3 0.87
CP012309_16 16.2|2847452|23|CP012309|PILER-CR 2847452-2847474 23 MF498901 Bacillus phage Anthony, complete genome 76003-76025 3 0.87
CP012309_21 21.5|3363175|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363175-3363211 37 GU949551 Clostridium phage phiCD6356, complete genome 10259-10295 5 0.865
CP012309_3 3.1|146735|29|CP012309|CRISPRCasFinder 146735-146763 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 49365-49402 6 0.842
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 NC_007917 Clostridium phage phi CD119, complete genome 49365-49402 6 0.842
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 NC_028996 Clostridium phage phiCDHM19, complete genome 50570-50607 6 0.842
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 49365-49402 6 0.842
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 NC_007917 Clostridium phage phi CD119, complete genome 49365-49402 6 0.842
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 NC_028996 Clostridium phage phiCDHM19, complete genome 50570-50607 6 0.842
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NC_008226 Clostridioides difficile 630 plasmid pCD630, complete sequence 425-462 7 0.816
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_CP016319 Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence 3327-3364 7 0.816
CP012309_9 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT 1638036-1638073 38 NZ_MG266000 Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence 431-468 7 0.816
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP053971 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence 12400-12429 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP013278 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence 63046-63075 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 56930-56959 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP039724 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence 70259-70288 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP051859 Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence 169574-169603 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP009347 Bacillus thuringiensis HD1002 plasmid 3, complete sequence 208330-208359 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP045025 Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence 63046-63075 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP007182 Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence 32133-32162 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 857478-857507 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP007752 Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence 38371-38400 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP017026 Campylobacter coli plasmid pCC14983A-1, complete sequence 111425-111454 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 MN895437 Escherichia phage teqskov, complete genome 133992-134021 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 MN994497 Phage NBEco003, complete genome 117255-117284 7 0.767
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 KT184312 Enterobacteria phage Kha5h, complete genome 74684-74713 7 0.767
CP012309_21 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364353-3364388 36 NZ_CP018094 Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence 5635-5670 7 0.806
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP021787 Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence 52403-52439 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_MF078634 Acinetobacter pittii strain HGSA488 plasmid pLS488, complete sequence 20453-20489 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP039519 Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence 124139-124175 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP018144 Acinetobacter baumannii strain HRAB-85 plasmid unnamed, complete sequence 56581-56617 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP033130 Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence 105569-105605 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NC_025109 Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence 52404-52440 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP050404 Acinetobacter baumannii strain VB2486 plasmid pVB2486_1, complete sequence 69318-69354 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_LT984690 Acinetobacter baumannii isolate K50 plasmid I, complete sequence 37976-38012 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP050386 Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence 122785-122821 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP008851 Acinetobacter baumannii strain AC29 plasmid pAC29b, complete sequence 62806-62842 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP051872 Acinetobacter baumannii strain Ab-D10a-a plasmid pAb-D10a-a_3, complete sequence 7015-7051 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP027121 Acinetobacter baumannii strain AR_0056 plasmid unnamed2, complete sequence 13417-13453 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_KX118105 Acinetobacter baumannii strain IHIT7853 plasmid IHIT7853-OXA-23, complete sequence 20566-20602 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP020594 Acinetobacter baumannii strain USA15 plasmid pUSA15_1, complete sequence 96829-96865 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP026712 Acinetobacter baumannii strain AR_0063 plasmid unitig_2_pilon, complete sequence 22073-22109 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_KM977710 Acinetobacter baumannii strain D46 plasmid pD46-3, complete sequence 32240-32276 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP026706 Acinetobacter baumannii strain AR_0056 plasmid tig00000059_pilon, complete sequence 51219-51255 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP037425 Acinetobacter johnsonii strain M19 plasmid pFM-M19, complete sequence 27067-27103 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_MG954378 Acinetobacter baumannii strain SGH0905 plasmid pS32-1, complete sequence 9426-9462 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_MG954377 Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence 118238-118274 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP035052 Acinetobacter baumannii strain ABUH763 plasmid p74.1Kbp, complete sequence 8582-8618 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP012008 Acinetobacter baumannii strain Ab04-mff plasmid pAB04-2, complete sequence 43098-43134 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP016302 Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb2-Ab66, complete sequence 48404-48440 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP016297 Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb2-Ab4, complete sequence 49299-49335 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NC_017848 Acinetobacter baumannii MDR-TJ plasmid pABTJ1, complete sequence 62530-62566 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_KM922672 Acinetobacter baumannii strain A221 plasmid pAZJ221, complete sequence 70502-70538 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_MK941846 Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence 22351-22387 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP024578 Acinetobacter baumannii strain AbPK1 plasmid pAbPK1b, complete sequence 28168-28204 7 0.811
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 NZ_CP035047 Acinetobacter baumannii strain ABUH793 plasmid p74.1Kbp, complete sequence 8582-8618 7 0.811
CP012309_8 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524720-1524757 38 HG531805 Clostridium phage CDMH1 complete genome 50892-50929 8 0.789
CP012309_8 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525846-1525883 38 HG531805 Clostridium phage CDMH1 complete genome 50892-50929 8 0.789
CP012309_9 9.3|1637644|35|CP012309|CRISPRCasFinder,CRT 1637644-1637678 35 MN693101 Marine virus AFVG_25M559, complete genome 35519-35553 8 0.771
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NC_011246 Borrelia recurrentis A1 plasmid pl124, complete sequence 62584-62613 8 0.733
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NC_011247 Borrelia duttonii Ly plasmid pl165, complete sequence 100908-100937 8 0.733
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP028890 Borrelia turcica IST7 plasmid lp34, complete sequence 2065-2094 8 0.733
CP012309_13 13.1|2240429|30|CP012309|CRT 2240429-2240458 30 NZ_CP017832 Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence 52592-52621 8 0.733
CP012309_13 13.16|2241413|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241413-2241448 36 MN693089 Marine virus AFVG_25M562, complete genome 11167-11202 8 0.778
CP012309_21 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364353-3364388 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 42888-42923 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NC_006134 Campylobacter coli plasmid pCC31, complete sequence 15612-15647 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP017869 Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence 12514-12549 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP044166 Campylobacter coli strain AR-0416 plasmid pAR-0416 190618-190653 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP023544 Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence 12110-12145 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP028186 Campylobacter jejuni strain CFSAN054107 plasmid pGMI16-002, complete sequence 30320-30355 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP017416 Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence 8263-8298 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP017872 Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence 216-251 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP020775 Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence 14989-15024 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NC_022355 Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence 12073-12108 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP045793 Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence 8502-8537 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NC_017282 Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence 38388-38423 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP023546 Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence 9073-9108 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP011017 Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence 30485-30520 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP017030 Campylobacter jejuni subsp. jejuni strain 14980A plasmid pCJ14980A, complete sequence 14816-14851 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP044168 Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence 17840-17875 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP017861 Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence 16284-16319 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NZ_CP048762 Campylobacter jejuni strain ZS004 plasmid pCJFEX, complete sequence 22918-22953 8 0.778
CP012309_21 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364944-3364979 36 NC_022354 Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence 40061-40096 8 0.778
CP012309_8 8.10|1524521|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1524521-1524557 37 MH733496 Escherichia phage PGN829.1, complete genome 51565-51601 9 0.757
CP012309_8 8.27|1525647|37|CP012309|PILER-CR,CRISPRCasFinder,CRT 1525647-1525683 37 MH733496 Escherichia phage PGN829.1, complete genome 51565-51601 9 0.757
CP012309_21 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363307-3363341 35 MK295204 Shigella phage vB_SdyM_006, complete genome 8425-8459 9 0.743
CP012309_21 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364353-3364388 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 83069-83104 9 0.75
CP012309_21 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364353-3364388 36 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 92393-92428 9 0.75
CP012309_21 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364353-3364388 36 X51344 Spiroplasma phage 1-R8A2B complete genome 5794-5829 9 0.75
CP012309_9 9.6|1637840|35|CP012309|CRISPRCasFinder,CRT 1637840-1637874 35 NZ_CP033935 Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence 25554-25588 10 0.714
CP012309_12 12.2|2189179|36|CP012309|CRISPRCasFinder,CRT 2189179-2189214 36 MG945528 UNVERIFIED: Microviridae sp. isolate 2156-1801, complete genome 1429-1464 10 0.722
CP012309_12 12.6|2189180|36|CP012309|PILER-CR 2189180-2189215 36 MG945528 UNVERIFIED: Microviridae sp. isolate 2156-1801, complete genome 1429-1464 10 0.722
CP012309_14 14.1|2600682|36|CP012309|CRISPRCasFinder,CRT 2600682-2600717 36 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47033-47068 10 0.722
CP012309_14 14.7|2601076|35|CP012309|CRISPRCasFinder,CRT,PILER-CR 2601076-2601110 35 NZ_CP021678 Bacillus licheniformis strain SRCM100027 plasmid pBL027-1 sequence 75875-75909 10 0.714
CP012309_21 21.8|3363371|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363371-3363407 37 NZ_CP009635 Bacillus cereus 03BB108 plasmid pBFI_6, complete sequence 7115-7151 11 0.703
CP012309_21 21.8|3363371|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3363371-3363407 37 NZ_CP053967 Bacillus cereus strain FDAARGOS_802 plasmid unnamed6, complete sequence 1566-1602 11 0.703
CP012309_13 13.24|2241936|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 2241936-2241972 37 MH319723 Marine virus AG-345-D19 Ga0172267_104 genomic sequence 13530-13566 12 0.676
CP012309_21 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder 3364745-3364781 37 CP035932 Acinetobacter baumannii strain VB31459 plasmid unnamed2, complete sequence 38934-38962 12 0.676

1. spacer 3.1|146735|29|CP012309|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

2. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

3. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

4. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

5. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

6. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

7. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

8. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

9. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

10. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

11. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

12. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

13. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 0, identity: 1.0

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
tagtcaaatattaagttttgagagggaaatctttattt	Protospacer
**************************************

14. spacer 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tttaaaaggtcaacttaaaggtagtaattttttaata	CRISPR spacer
tttaaaaggtcaacttaaaggtagtaattttttaata	Protospacer
*************************************

15. spacer 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

tttaaaaggtcaacttaaaggtagtaattttttaata	CRISPR spacer
tttaaaaggtcaacttaaaggtagtaattttttaata	Protospacer
*************************************

16. spacer 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

tttaaaaggtcaacttaaaggtagtaattttttaata	CRISPR spacer
tttaaaaggtcaacttaaaggtagtaattttttaata	Protospacer
*************************************

17. spacer 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tctataacattactagcaaaatcaaggacttggtctt	CRISPR spacer
tctataacattactagcaaaatcaaggacttggtctt	Protospacer
*************************************

18. spacer 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tctataacattactagcaaaatcaaggacttggtctt	CRISPR spacer
tctataacattactagcaaaatcaaggacttggtctt	Protospacer
*************************************

19. spacer 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tctataacattactagcaaaatcaaggacttggtctt	CRISPR spacer
tctataacattactagcaaaatcaaggacttggtctt	Protospacer
*************************************

20. spacer 11.3|1875870|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tgaacttgaaagcgaagtagtcgggaatgacttttt	CRISPR spacer
tgaacttgaaagcgaagtagtcgggaatgacttttt	Protospacer
************************************

21. spacer 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttatctatttcacttatattgtcgacatcccactca	CRISPR spacer
ttatctatttcacttatattgtcgacatcccactca	Protospacer
************************************

22. spacer 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

ttatctatttcacttatattgtcgacatcccactca	CRISPR spacer
ttatctatttcacttatattgtcgacatcccactca	Protospacer
************************************

23. spacer 11.9|1876263|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

ttatctatttcacttatattgtcgacatcccactca	CRISPR spacer
ttatctatttcacttatattgtcgacatcccactca	Protospacer
************************************

24. spacer 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gatggtaaagtaggttctggagcagtaggaaatataa	CRISPR spacer
gatggtaaagtaggttctggagcagtaggaaatataa	Protospacer
*************************************

25. spacer 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

gatggtaaagtaggttctggagcagtaggaaatataa	CRISPR spacer
gatggtaaagtaggttctggagcagtaggaaatataa	Protospacer
*************************************

26. spacer 11.10|1876328|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

gatggtaaagtaggttctggagcagtaggaaatataa	CRISPR spacer
gatggtaaagtaggttctggagcagtaggaaatataa	Protospacer
*************************************

27. spacer 13.5|2240686|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

tctattaggcgatttgtaatgtttttatcttcttgtga	CRISPR spacer
tctattaggcgatttgtaatgtttttatcttcttgtga	Protospacer
**************************************

28. spacer 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gagaactggagaaatatataattgcataaaatcagaga	CRISPR spacer
gagaactggagaaatatataattgcataaaatcagaga	Protospacer
**************************************

29. spacer 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gagaactggagaaatatataattgcataaaatcagaga	CRISPR spacer
gagaactggagaaatatataattgcataaaatcagaga	Protospacer
**************************************

30. spacer 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gagaactggagaaatatataattgcataaaatcagaga	CRISPR spacer
gagaactggagaaatatataattgcataaaatcagaga	Protospacer
**************************************

31. spacer 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

gagaactggagaaatatataattgcataaaatcagaga	CRISPR spacer
gagaactggagaaatatataattgcataaaatcagaga	Protospacer
**************************************

32. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatatgttaacagatttatttaacagggtaa	Protospacer
***********************************

33. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatatgttaacagatttatttaacagggtaa	Protospacer
***********************************

34. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatatgttaacagatttatttaacagggtaa	Protospacer
***********************************

35. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatatgttaacagatttatttaacagggtaa	Protospacer
***********************************

36. spacer 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 0, identity: 1.0

aatctattttttgaacagataaatacaacaatttat	CRISPR spacer
aatctattttttgaacagataaatacaacaatttat	Protospacer
************************************

37. spacer 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 0, identity: 1.0

aatctattttttgaacagataaatacaacaatttat	CRISPR spacer
aatctattttttgaacagataaatacaacaatttat	Protospacer
************************************

38. spacer 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 0, identity: 1.0

aatctattttttgaacagataaatacaacaatttat	CRISPR spacer
aatctattttttgaacagataaatacaacaatttat	Protospacer
************************************

39. spacer 21.14|3363764|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 0, identity: 1.0

aatctattttttgaacagataaatacaacaatttat	CRISPR spacer
aatctattttttgaacagataaatacaacaatttat	Protospacer
************************************

40. spacer 1.1|17891|34|CP012309|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

aaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
aaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
*********.************************

41. spacer 2.1|138138|37|CP012309|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.973

actgaacgcatgtgaagtttgtttgttggcgctgtgc	CRISPR spacer
actgaacacatgtgaagtttgtttgttggcgctgtgc	Protospacer
*******.*****************************

42. spacer 4.1|154262|39|CP012309|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

agaataaactgaacgcatgtgaagtttgtttgttggcgc	CRISPR spacer
agaataaactgaacacatgtgaagtttgtttgttggcgc	Protospacer
**************.************************

43. spacer 8.3|1524059|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

gttggattgatgcaaaagtttcttatacagctcttaa	CRISPR spacer
gttggattaatgcaaaagtttcttatacagctcttaa	Protospacer
********.****************************

44. spacer 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

45. spacer 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

46. spacer 8.7|1524322|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

47. spacer 8.20|1525185|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

gttggattgatgcaaaagtttcttatacagctcttaa	CRISPR spacer
gttggattaatgcaaaagtttcttatacagctcttaa	Protospacer
********.****************************

48. spacer 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

49. spacer 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

50. spacer 8.24|1525448|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

ttaaattcagaagaacaggaggtatttaatagtatta	CRISPR spacer
ttaaattcagaagaacaggagatatttaatagtatta	Protospacer
*********************.***************

51. spacer 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 1, identity: 0.973

tttaaaaggtcaacttaaaggtagtaattttttaata	CRISPR spacer
attaaaaggtcaacttaaaggtagtaattttttaata	Protospacer
 ************************************

52. spacer 9.8|1637970|37|CP012309|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.973

tttaaaaggtcaacttaaaggtagtaattttttaata	CRISPR spacer
attaaaaggtcaacttaaaggtagtaattttttaata	Protospacer
 ************************************

53. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 1, identity: 0.974

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttgcgtatttttt	Protospacer
*************************************.

54. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 1, identity: 0.974

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttgcgtatttttt	Protospacer
*************************************.

55. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 1, identity: 0.974

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttgcgtatttttt	Protospacer
*************************************.

56. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 1, identity: 0.974

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttgcgtatttttt	Protospacer
*************************************.

57. spacer 9.13|1638301|37|CP012309|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

cttgtcaagtatcgccctgtcagctgattccatatta	CRISPR spacer
cttgtcaagtatcgccctgtcagctgattctatatta	Protospacer
******************************.******

58. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

59. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

60. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

61. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

62. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

63. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

64. spacer 11.7|1876131|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.973

gaaaatcagtttttcgggattttagcttctgaggatt	CRISPR spacer
ggaaatcagtttttcgggattttagcttctgaggatt	Protospacer
*.***********************************

65. spacer 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

gggcaacagaaacattaccaaaaataataaatagcat	CRISPR spacer
gggcaacagaaacattaccagaaataataaatagcat	Protospacer
********************.****************

66. spacer 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.973

gggcaacagaaacattaccaaaaataataaatagcat	CRISPR spacer
gggcaacagaaacattaccagaaataataaatagcat	Protospacer
********************.****************

67. spacer 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

gggcaacagaaacattaccaaaaataataaatagcat	CRISPR spacer
gggcaacagaaacattaccagaaataataaatagcat	Protospacer
********************.****************

68. spacer 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.974

ctacactctttaatattccaataaatccatagtactca	CRISPR spacer
ttacactctttaatattccaataaatccatagtactca	Protospacer
.*************************************

69. spacer 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.974

ctacactctttaatattccaataaatccatagtactca	CRISPR spacer
ttacactctttaatattccaataaatccatagtactca	Protospacer
.*************************************

70. spacer 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.974

ctacactctttaatattccaataaatccatagtactca	CRISPR spacer
ttacactctttaatattccaataaatccatagtactca	Protospacer
.*************************************

71. spacer 13.18|2241544|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.971

ttagcaagag-aaagcaatctgtgttcaaaaaagag	CRISPR spacer
-tagcaagagaaaagcaatctgtgttcaaaaaagag	Protospacer
 ********* *************************

72. spacer 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

tgatgaagtatggataattttttacttaatgtattatc	CRISPR spacer
tgatgaagtatggataattttttacttaatgtattagc	Protospacer
************************************ *

73. spacer 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

tgatgaagtatggataattttttacttaatgtattatc	CRISPR spacer
tgatgaagtatggataattttttacttaatgtattagc	Protospacer
************************************ *

74. spacer 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

tgatgaagtatggataattttttacttaatgtattatc	CRISPR spacer
tgatgaagtatggataattttttacttaatgtattagc	Protospacer
************************************ *

75. spacer 14.6|2601009|38|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.974

gagaactggagaaatatataattgcataaaatcagaga	CRISPR spacer
gagaactggagaaatatataattgcataaaatcagagg	Protospacer
*************************************.

76. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.971

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatatgttaacagatttatttaacagagtaa	Protospacer
******************************.****

77. spacer 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.944

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactaatttttatact	Protospacer
*..*********************************

78. spacer 9.10|1638103|37|CP012309|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.946

tttaaaataaaatatatttgcctaccatcaactgaag	CRISPR spacer
tttaaaataaaatatatttgtctaccatcaaccgaag	Protospacer
********************.***********.****

79. spacer 9.16|1638497|37|CP012309|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.946

agcaattctgatatttttattctaatcatttgaaatc	CRISPR spacer
agcaattctgatatttttattctgatcatttaaaatc	Protospacer
***********************.*******.*****

80. spacer 9.17|1638563|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.947

ccatcttttgttgctttacataaatttatattacttac	CRISPR spacer
ccatcttttgttgctttgcatagatttatattacttac	Protospacer
*****************.****.***************

81. spacer 11.2|1875804|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

tctataacattactagcaaaatcaaggacttggtctt	CRISPR spacer
tctataacgttaccagcaaaatcaaggacttggtctt	Protospacer
********.****.***********************

82. spacer 11.3|1875870|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

tgaacttgaaagcgaagtagtcgggaatgacttttt	CRISPR spacer
tgaacttgaaagtgaagtggtcgggaatgacttttt	Protospacer
************.*****.*****************

83. spacer 11.8|1876197|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

gggcaacagaaacattaccaaaaataataaatagcat	CRISPR spacer
gggcaacagagacattaccagaaataataaatagcat	Protospacer
**********.*********.****************

84. spacer 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

85. spacer 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

86. spacer 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT matches to LN680008 (Clostridium phage phiCDHS1 gp04 gene for putative capsid protein) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

87. spacer 12.1|2189113|37|CP012309|CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

88. spacer 12.5|2189114|37|CP012309|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

89. spacer 12.5|2189114|37|CP012309|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

90. spacer 12.5|2189114|37|CP012309|PILER-CR matches to LN680008 (Clostridium phage phiCDHS1 gp04 gene for putative capsid protein) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

91. spacer 12.5|2189114|37|CP012309|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.946

ttaagactagcagactcataagcaattagttgcctct	CRISPR spacer
ttaagaccagcagactcataagcaattagttgtctct	Protospacer
*******.************************.****

92. spacer 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.947

ctacactctttaatattccaataaatccatagtactca	CRISPR spacer
ttacactctttaatataccaataaatccatagtactca	Protospacer
.*************** *********************

93. spacer 13.7|2240820|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.947

ctacactctttaatattccaataaatccatagtactca	CRISPR spacer
ttacactctttaatataccaataaatccatagtactca	Protospacer
.*************** *********************

94. spacer 14.1|2600682|36|CP012309|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
acaattattaattgttttattaataaaatcacagca	Protospacer
**********************.*.***********

95. spacer 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

96. spacer 7.11|1311946|36|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 3, identity: 0.917

aacaaaaaagatacatctgtaactaatttttatact	CRISPR spacer
agtaaaaaagatacatctgtaactattttttatact	Protospacer
*..********************** **********

97. spacer 11.1|1875738|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.919

ttttataaaaggtctagcaaataattgttagactttt	CRISPR spacer
ccttataaaaggtctagcaaataattgttagaccttt	Protospacer
..*******************************.***

98. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP014419 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence) position: , mismatch: 3, identity: 0.9

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
taaatcaatctttatttaataacaaaaaac	Protospacer
*.* ****************** *******

99. spacer 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 3, identity: 0.921

tgatgaagtatggataattttttacttaatgtattatc	CRISPR spacer
tgatgaagtatggataattttttacttaatatactagc	Protospacer
******************************.**.** *

100. spacer 13.20|2241673|38|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.921

tgatgaagtatggataattttttacttaatgtattatc	CRISPR spacer
tgatgaagtatggataattttttacttaacatattagc	Protospacer
*****************************..***** *

101. spacer 16.2|2847452|23|CP012309|PILER-CR matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 3, identity: 0.87

agtagatttatcaagataagaag	CRISPR spacer
tttagatttatcaaaataagaag	Protospacer
  ************.********

102. spacer 16.2|2847452|23|CP012309|PILER-CR matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 3, identity: 0.87

agtagatttatcaagataagaag	CRISPR spacer
tttagatttatcaaaataagaag	Protospacer
  ************.********

103. spacer 16.2|2847452|23|CP012309|PILER-CR matches to KU737346 (Bacillus phage Vinny, complete genome) position: , mismatch: 3, identity: 0.87

agtagatttatcaagataagaag	CRISPR spacer
tttagatttatcaaaataagaag	Protospacer
  ************.********

104. spacer 16.2|2847452|23|CP012309|PILER-CR matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 3, identity: 0.87

agtagatttatcaagataagaag	CRISPR spacer
tttagatttatcaaaataagaag	Protospacer
  ************.********

105. spacer 16.2|2847452|23|CP012309|PILER-CR matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 3, identity: 0.87

agtagatttatcaagataagaag	CRISPR spacer
tttagatttatcaaaataagaag	Protospacer
  ************.********

106. spacer 21.5|3363175|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 5, identity: 0.865

caggattagcagcagcgctcggacccgttttacttat	CRISPR spacer
caggattagcagcagcgctcggacctgttcttttaat	Protospacer
*************************.***.* .* **

107. spacer 3.1|146735|29|CP012309|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

108. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

109. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

110. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

111. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

112. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

113. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.842

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctagcaattatttagttttgagagggaaatctttattt	Protospacer
. . *** **** *************************

114. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 7, identity: 0.816

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttaacaaaatatc	Protospacer
***************************.   *  * **

115. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 7, identity: 0.816

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttaacaaaatatc	Protospacer
***************************.   *  * **

116. spacer 9.9|1638036|38|CP012309|CRISPRCasFinder,CRT matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 7, identity: 0.816

atattatcatcatttagcaaagaatttgcgtatttttc	CRISPR spacer
atattatcatcatttagcaaagaatttaacaaaatatc	Protospacer
***************************.   *  * **

117. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

118. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

119. spacer 13.1|2240429|30|CP012309|CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

120. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

121. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

122. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

123. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
tccatcaatctttattaagtaagaaaaaga	Protospacer
*   ************ *.*********. 

124. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP007182 (Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
ttatttttactttatttaaaaagaaaaaac	Protospacer
* *.*.   ********** **********

125. spacer 13.1|2240429|30|CP012309|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
taagataatctttattaaatcagaaaaaaa	Protospacer
*.*  .********** *** ******** 

126. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP007752 (Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
ttatttttactttatttaaaaagaaaaaac	Protospacer
* *.*.   ********** **********

127. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
ttatttttactttatttaaaaagaaaaaac	Protospacer
* *.*.   ********** **********

128. spacer 13.1|2240429|30|CP012309|CRT matches to MN895437 (Escherichia phage teqskov, complete genome) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
taattaaatctttagttaataagaaaatga	Protospacer
*.*.* ******** ************ . 

129. spacer 13.1|2240429|30|CP012309|CRT matches to MN994497 (Phage NBEco003, complete genome) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
taattaaatctttagttaataagaaaatga	Protospacer
*.*.* ******** ************ . 

130. spacer 13.1|2240429|30|CP012309|CRT matches to KT184312 (Enterobacteria phage Kha5h, complete genome) position: , mismatch: 7, identity: 0.767

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
taattaaatctttagttaataagaaaatga	Protospacer
*.*.* ******** ************ . 

131. spacer 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018094 (Francisella hispaniensis FSC454 strain CCUG 58020 plasmid pFSC454, complete sequence) position: , mismatch: 7, identity: 0.806

actttaataattaaaatgatatttttaaactaactt	CRISPR spacer
cctttaataattaaattaatatttttaaatttaaat	Protospacer
 ************** *.***********.* *  *

132. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021787 (Acinetobacter baumannii strain A85 plasmid pA85-3, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

133. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF078634 (Acinetobacter pittii strain HGSA488 plasmid pLS488, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

134. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

135. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018144 (Acinetobacter baumannii strain HRAB-85 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

136. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033130 (Acinetobacter wuhouensis strain WCHAW010062 plasmid pOXA23_010062, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

137. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_025109 (Acinetobacter baumannii strain A85 plasmid pA85-3 clone GC1 AbaR4 resistance island, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

138. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050404 (Acinetobacter baumannii strain VB2486 plasmid pVB2486_1, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

139. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT984690 (Acinetobacter baumannii isolate K50 plasmid I, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

140. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050386 (Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

141. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP008851 (Acinetobacter baumannii strain AC29 plasmid pAC29b, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

142. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP051872 (Acinetobacter baumannii strain Ab-D10a-a plasmid pAb-D10a-a_3, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

143. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP027121 (Acinetobacter baumannii strain AR_0056 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

144. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KX118105 (Acinetobacter baumannii strain IHIT7853 plasmid IHIT7853-OXA-23, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

145. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020594 (Acinetobacter baumannii strain USA15 plasmid pUSA15_1, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

146. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026712 (Acinetobacter baumannii strain AR_0063 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

147. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KM977710 (Acinetobacter baumannii strain D46 plasmid pD46-3, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

148. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026706 (Acinetobacter baumannii strain AR_0056 plasmid tig00000059_pilon, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

149. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP037425 (Acinetobacter johnsonii strain M19 plasmid pFM-M19, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

150. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG954378 (Acinetobacter baumannii strain SGH0905 plasmid pS32-1, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

151. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG954377 (Acinetobacter baumannii strain SGH9601 plasmid pS21-2, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

152. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP035052 (Acinetobacter baumannii strain ABUH763 plasmid p74.1Kbp, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

153. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012008 (Acinetobacter baumannii strain Ab04-mff plasmid pAB04-2, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

154. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016302 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb2-Ab66, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

155. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016297 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb2-Ab4, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

156. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_017848 (Acinetobacter baumannii MDR-TJ plasmid pABTJ1, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

157. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KM922672 (Acinetobacter baumannii strain A221 plasmid pAZJ221, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

158. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

159. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024578 (Acinetobacter baumannii strain AbPK1 plasmid pAbPK1b, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

160. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP035047 (Acinetobacter baumannii strain ABUH793 plasmid p74.1Kbp, complete sequence) position: , mismatch: 7, identity: 0.811

agtattcacacagataagaaaattaatcta-ataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatctatatggta-	Protospacer
. ****** ********.************ **..** 

161. spacer 8.13|1524720|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 8, identity: 0.789

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctaatatatatttaattttgagagggaaatctttattt	Protospacer
. . .* ***** *.***********************

162. spacer 8.30|1525846|38|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 8, identity: 0.789

tagtcaaatattaagttttgagagggaaatctttattt	CRISPR spacer
ctaatatatatttaattttgagagggaaatctttattt	Protospacer
. . .* ***** *.***********************

163. spacer 9.3|1637644|35|CP012309|CRISPRCasFinder,CRT matches to MN693101 (Marine virus AFVG_25M559, complete genome) position: , mismatch: 8, identity: 0.771

tcagaatataatgaacttgaagtaaataagttcat-----	CRISPR spacer
ccagaaaataatgaaattgaagtaaa-----tcatggaaa	Protospacer
.***** ******** **********     ****     

164. spacer 13.1|2240429|30|CP012309|CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 8, identity: 0.733

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
cttatcaatcttaatttcataagaaaaatt	Protospacer
.   ******** **** ********** .

165. spacer 13.1|2240429|30|CP012309|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.733

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
cttatcaatcttaatttcataagaaaaatt	Protospacer
.   ******** **** ********** .

166. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP028890 (Borrelia turcica IST7 plasmid lp34, complete sequence) position: , mismatch: 8, identity: 0.733

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
aggtcttatctttatttaaaaagaaaaaaa	Protospacer
 *.... ************ ********* 

167. spacer 13.1|2240429|30|CP012309|CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 8, identity: 0.733

tgactcaatctttatttaataagaaaaaac	CRISPR spacer
aaaagaaatctatatttaataagaagaaag	Protospacer
 .*   ***** *************.*** 

168. spacer 13.16|2241413|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to MN693089 (Marine virus AFVG_25M562, complete genome) position: , mismatch: 8, identity: 0.778

tatgttgtaaaatcaaagaagctgattgtacaaggt	CRISPR spacer
tgtctggtaaaatgaaagaagctgatggtacagtgg	Protospacer
*.* * ******* ************ *****. * 

169. spacer 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 8, identity: 0.778

acttta---ataattaaaatgatatttttaaactaactt	CRISPR spacer
---ttaaatataattaaattgatatttttacactatatc	Protospacer
   ***   ********* *********** ****  *.

170. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_006134 (Campylobacter coli plasmid pCC31, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

171. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017869 (Campylobacter coli strain MG1116 plasmid pCCDM116L, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

172. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

173. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023544 (Campylobacter jejuni strain CFSAN032806 plasmid pCFSAN032806, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

174. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP028186 (Campylobacter jejuni strain CFSAN054107 plasmid pGMI16-002, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

175. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017416 (Campylobacter jejuni strain MTVDSCj07 plasmid pMTVDSCj07-1, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

176. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017872 (Campylobacter coli strain BP3183 plasmid pCCDM183, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

177. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020775 (Campylobacter jejuni strain YH002 plasmid pCJP002, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

178. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_022355 (Campylobacter coli CVM N29710 plasmid pN29710-1, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

179. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045793 (Campylobacter coli strain CFSAN032805 plasmid p1CFSAN032805, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

180. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_017282 (Campylobacter jejuni subsp. jejuni S3 plasmid pTet, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

181. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023546 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_1, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

182. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011017 (Campylobacter coli strain FB1 plasmid pFB1TET, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

183. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017030 (Campylobacter jejuni subsp. jejuni strain 14980A plasmid pCJ14980A, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

184. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044168 (Campylobacter jejuni strain AR-0415 plasmid pAR-0415, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

185. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP017861 (Campylobacter jejuni strain TS1218 plasmid pCJDM218, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

186. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048762 (Campylobacter jejuni strain ZS004 plasmid pCJFEX, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

187. spacer 21.32|3364944|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NC_022354 (Campylobacter jejuni subsp. jejuni 00-2544 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

taacttctataatattacccatctcttttaatctaa	CRISPR spacer
actcctatataattttatccatctcttttaatctca	Protospacer
   *.* ****** ***.**************** *

188. spacer 8.10|1524521|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MH733496 (Escherichia phage PGN829.1, complete genome) position: , mismatch: 9, identity: 0.757

gttcctgctcctgttcctgtaccgggttgattacctg	CRISPR spacer
gaccattctcctgttcctgtaactggttgattacacc	Protospacer
* .* * ************** * ********** . 

189. spacer 8.27|1525647|37|CP012309|PILER-CR,CRISPRCasFinder,CRT matches to MH733496 (Escherichia phage PGN829.1, complete genome) position: , mismatch: 9, identity: 0.757

gttcctgctcctgttcctgtaccgggttgattacctg	CRISPR spacer
gaccattctcctgttcctgtaactggttgattacacc	Protospacer
* .* * ************** * ********** . 

190. spacer 21.7|3363307|35|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 9, identity: 0.743

gtttaatatgttaacagatttatttaacagggtaa	CRISPR spacer
gtttaatttgtcaacagatttatttgtgtatgcaa	Protospacer
******* ***.*************.   . *.**

191. spacer 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

acttta---ataattaaaatgatatttttaaactaactt	CRISPR spacer
---ttaaatataattaaattgatatttttacactataca	Protospacer
   ***   ********* *********** ****  . 

192. spacer 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.75

acttta---ataattaaaatgatatttttaaactaactt	CRISPR spacer
---ttaaatataattaaattgatatttttacactataca	Protospacer
   ***   ********* *********** ****  . 

193. spacer 21.23|3364353|36|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to X51344 (Spiroplasma phage 1-R8A2B complete genome) position: , mismatch: 9, identity: 0.75

acttta---ataattaaaatgatatttttaaactaactt	CRISPR spacer
---ttaaatataattaaattgatatttttacactataca	Protospacer
   ***   ********* *********** ****  . 

194. spacer 9.6|1637840|35|CP012309|CRISPRCasFinder,CRT matches to NZ_CP033935 (Chryseobacterium balustinum strain KC_1863 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.714

atacttggtcaatacatttcaaaagttgcaacaga	CRISPR spacer
caaacggaaaaataaatttgaaaagttgcaacaga	Protospacer
  * . *.  **** **** ***************

195. spacer 12.2|2189179|36|CP012309|CRISPRCasFinder,CRT matches to MG945528 (UNVERIFIED: Microviridae sp. isolate 2156-1801, complete genome) position: , mismatch: 10, identity: 0.722

tttaataataaggagagaaaaaatgaatatttatga	CRISPR spacer
cttcggcctaaggagtgaaaaaatgaaaatttattc	Protospacer
.** .   ******* *********** ******  

196. spacer 12.6|2189180|36|CP012309|PILER-CR matches to MG945528 (UNVERIFIED: Microviridae sp. isolate 2156-1801, complete genome) position: , mismatch: 10, identity: 0.722

tttaataataaggagagaaaaaatgaatatttatga	CRISPR spacer
cttcggcctaaggagtgaaaaaatgaaaatttattc	Protospacer
.** .   ******* *********** ******  

197. spacer 14.1|2600682|36|CP012309|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
tgaattcttaattgttttattagagaaatacctttt	Protospacer
  **** **************** *****  *  . 

198. spacer 14.7|2601076|35|CP012309|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021678 (Bacillus licheniformis strain SRCM100027 plasmid pBL027-1 sequence) position: , mismatch: 10, identity: 0.714

cttgtttcttctgttaattttattataccttgttt	CRISPR spacer
tcggttcctgctgttaattttattatactcatttg	Protospacer
.. ***.** ******************..  ** 

199. spacer 21.8|3363371|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009635 (Bacillus cereus 03BB108 plasmid pBFI_6, complete sequence) position: , mismatch: 11, identity: 0.703

tgataacttatttaaaaataaatctaatgttgcaatt	CRISPR spacer
tatcaacttatttaaaagttaatctaatgtaatacca	Protospacer
*. .*************.* ********** ..* . 

200. spacer 21.8|3363371|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053967 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed6, complete sequence) position: , mismatch: 11, identity: 0.703

tgataacttatttaaaaataaatctaatgttgcaatt	CRISPR spacer
tatcaacttatttaaaagttaatctaatgtaatacca	Protospacer
*. .*************.* ********** ..* . 

201. spacer 13.24|2241936|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to MH319723 (Marine virus AG-345-D19 Ga0172267_104 genomic sequence) position: , mismatch: 12, identity: 0.676

atttgtctaatatttataataaaaaagttgttttttc	CRISPR spacer
tattgtcaaatatctataataaaaaagtaccaaatat	Protospacer
  ***** *****.**************  .   * .

202. spacer 21.29|3364745|37|CP012309|CRT,PILER-CR,CRISPRCasFinder matches to CP035932 (Acinetobacter baumannii strain VB31459 plasmid unnamed2, complete sequence) position: , mismatch: 12, identity: 0.676

agtattcacacagataagaaaattaatctaataatag	CRISPR spacer
gttattcaaacagataaaaaaattaatct--------	Protospacer
. ****** ********.***********        

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 211665 : 301741 73 Clostridium_phage(10.34%) protease,coat,transposase NA
DBSCAN-SWA_2 1448561 : 1473001 29 Clostridium_phage(54.55%) tail NA
DBSCAN-SWA_3 1556279 : 1566006 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_4 1694266 : 1748519 67 Clostridium_phage(78.95%) head,terminase,tail,portal,capsid,holin NA
DBSCAN-SWA_5 1832196 : 1842433 8 Clostridium_phage(33.33%) protease,transposase NA
DBSCAN-SWA_6 2599374 : 2605705 11 Clostridium_phage(71.43%) transposase NA
DBSCAN-SWA_7 3158236 : 3167189 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_8 3646830 : 3655173 12 Clostridium_phage(57.14%) lysis,holin NA
DBSCAN-SWA_9 3817385 : 3877222 57 Agrobacterium_phage(15.38%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage