CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP023062	Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence	0 crisprs	RT	0	0	3	0
CP023061	Escherichia coli strain FORC_069 chromosome, complete genome	4 crisprs	csa3,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol	0	13	15	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

93 : 7580

Enterobacteria_phage(50.0%)

integrase,transposase

attL 30:42|attR 3529:3541

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
30:42	attL	NA	NA	NA	NA
AXV27852.1\|93_954_-	Beta-lactamase	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
AXV27853.1\|1136_1694_-\|integrase	Resolvase/integrase Bin	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
AXV27854.1\|1728_1941_+	hypothetical protein	Q1MVP5	Enterobacteria_phage	5.4e-07	53.5
AXV27855.1\|1978_2095_+	hypothetical protein	NA	NA	NA	NA
AXV27856.1\|2271_2427_+	hypothetical protein	NA	NA	NA	NA
AXV27857.1\|2475_3468_+	hypothetical protein	NA	NA	NA	NA
AXV27858.1\|3684_4362_+	hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.5e-10	33.1
3529:3541	attR	NA	NA	NA	NA
AXV27859.1\|4358_4529_+	Transposase protein	A0A0P0ZDM8	Stx2-converting_phage	1.0e-19	75.0
AXV27860.1\|4547_4715_-	hypothetical protein	NA	NA	NA	NA
AXV27861.1\|4671_5691_+	Transposase	NA	NA	NA	NA
AXV27862.1\|5793_5961_-	hypothetical protein	NA	NA	NA	NA
AXV27863.1\|5991_6171_+	hypothetical protein	NA	NA	NA	NA
AXV27864.1\|6167_6422_+\|transposase	transposase C protein	NA	NA	NA	NA
AXV27865.1\|6262_6607_-	hypothetical protein	NA	NA	NA	NA
AXV27866.1\|6464_6821_-	TEM family class A beta-lactamase protein	NA	NA	NA	NA
AXV27867.1\|6746_7580_+	Transposase	A0A0P0ZBS5	Stx2-converting_phage	7.2e-95	65.4

DBSCAN-SWA_2

30532 : 46519

Enterobacteria_phage(26.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV27920.1\|30532_31273_+	RepFIB associated resolvase	I3WFA4	Macacine_betaherpesvirus	3.5e-24	57.7
AXV27921.1\|31362_31482_+	hypothetical protein	NA	NA	NA	NA
AXV27922.1\|31557_32511_-	RepFIB replication protein A	J9Q7H0	Salmonella_phage	8.8e-97	58.6
AXV27923.1\|32527_32698_-	hypothetical protein	NA	NA	NA	NA
AXV27924.1\|32844_33282_-	hypothetical protein	NA	NA	NA	NA
AXV27925.1\|33547_33973_+	Phage protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
AXV27926.1\|33969_34320_+	Transposase protein	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
AXV27927.1\|34350_35919_+	Transposase	A0A0P0ZEB3	Stx2-converting_phage	2.1e-151	62.6
AXV27928.1\|36028_37162_-	Transposase	NA	NA	NA	NA
AXV27929.1\|37225_37411_+	Transposase	A0A0P0ZBS5	Stx2-converting_phage	2.6e-21	72.4
AXV27930.1\|37414_37561_-	hypothetical protein	NA	NA	NA	NA
AXV27931.1\|37529_37646_+	hypothetical protein	NA	NA	NA	NA
AXV27932.1\|37772_37991_+	CcdA protein	NA	NA	NA	NA
AXV27933.1\|37971_38298_+	CcdB toxin protein	NA	NA	NA	NA
AXV27934.1\|38298_39108_+	Site-specific recombinase XerD	I3WFA4	Macacine_betaherpesvirus	7.8e-54	95.5
AXV27935.1\|39245_39521_-	hypothetical protein	NA	NA	NA	NA
AXV27936.1\|39514_40159_-	Chromosome (plasmid) partitioning protein ParA	A0A222YXS3	Escherichia_phage	8.8e-40	43.5
AXV27937.1\|40387_41359_+	Protein StbA	A0A222YXF2	Escherichia_phage	3.3e-67	43.3
AXV27938.1\|41363_41756_+	hypothetical protein	NA	NA	NA	NA
AXV27939.1\|41787_42642_-	Error-prone, lesion bypass DNA polymerase V (UmuC)	F1C5A5	Cronobacter_phage	2.4e-85	60.8
AXV27940.1\|42625_43072_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.8e-80	99.3
AXV27941.1\|43188_44697_-	Retron-type RNA-directed DNA polymerase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
AXV27942.1\|44735_44858_-	hypothetical protein	NA	NA	NA	NA
AXV27943.1\|45303_45783_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.6e-73	97.8
AXV27944.1\|45782_46109_-	Mobile element protein	Q6H9S4	Enterobacteria_phage	2.4e-54	97.2
AXV27945.1\|46114_46519_-	Mobile element protein	A0A0N7C1X7	Escherichia_phage	5.8e-50	95.4

DBSCAN-SWA_3

70342 : 77289

Stx2-converting_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV27991.1\|70342_70777_+	hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
AXV27992.1\|70736_70868_-	hypothetical protein	NA	NA	NA	NA
AXV27993.1\|70868_71123_+	Transposase protein	A0A0P0ZBY2	Stx2-converting_phage	1.1e-25	62.7
AXV27994.1\|71153_71426_+	hypothetical protein	NA	NA	NA	NA
AXV27995.1\|71362_71968_+	Transposase	A0A0P0ZEB3	Stx2-converting_phage	7.4e-65	65.5
AXV27996.1\|72019_72412_+	hypothetical protein	NA	NA	NA	NA
AXV27997.1\|72426_73134_+	Retron-type RNA-directed DNA polymerase	A0A0U4J920	Pseudomonas_phage	2.3e-09	28.2
AXV27998.1\|73410_73626_+	hypothetical protein	NA	NA	NA	NA
AXV27999.1\|73799_73964_-	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
AXV28000.1\|74035_74182_+	hypothetical protein	NA	NA	NA	NA
AXV28001.1\|74204_74639_+	Mobile element protein	A0A077SL39	Escherichia_phage	1.0e-76	98.6
AXV28002.1\|74644_74779_+	hypothetical protein	NA	NA	NA	NA
AXV28003.1\|74781_77289_+\|transposase	TnpA transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	70.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP023061

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CRISPR-Cas detection and classification

Crispr_ID: CP023061_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023061_1

1118185-1119006

Unclear

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

13 spacers

The CRISPR arrays of CP023061_1

>merge|CP023061|1|1118185-1119006|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCAGGAACTGGCGCTGCTGGAGCAAAACCCGGTATGAGTTCCCCGCGCCAGCGGGGATAAACCGAAAAGGGCCGCATTGACGGCCCTGTGTTATCGGAGTTCCCCGCGCCAGCGGGGATAAACCGTTAGCTGTTAGCCAAACATGTCGACCTGTTTGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGGTGGCGGTGGTGCTGTAATTCACACCGGTAGAGTTCCCCGCGCCAGCGGGGATAAACCGTATTCCCCCAGTCACCCCCGCCACCAAAATCAGAGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTCAGACTCATCAAAATAATCCTTTAATGAGTTCCCCGCGCCAGCGGGGATAAACCGCATTGCCTTTGCAGCGTCTTTCCGATCATTCAGAGTTCCCCGCGCCAGCGGGGATAAACCGAACGTGAGATACGCCTCCCAGCGGCGCTCGGTGAGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCAAACAGTATCACCGCGTTAACGCCCGCGAGTTCCCCGCGCCAGCGGGGATAAACCGCCACACACGTCGAGCTGGTGGGGGTTAATGCTGAGTTCCCCGCGCCAGCGGGGATAAACCGACACCTCTACTGACGTTCCTGAACAAGAAGATGAGTTCCCCGCGCCAGCGGGGATAAACCGAAACCGGACGAGGGCGCGCTAAAACGTGATTAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCTCTCAATTTGTAACGTCTGCAATGTCAGGCGAGTTCCCCGTGCCAGCGGGGATAAACCA

>CP023061|1|1|1118185-1119005|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACC	AGGAACTGGCGCTGCTGGAGCAAAACCCGGTAT
GAGTTCCCCGCGCCAGCGGGGATAAACC	GAAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACC	GTTAGCTGTTAGCCAAACATGTCGACCTGTTTG
GAGTTCCCCGCGCCAGCGGGGATAAACC	GGGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACC	GTATTCCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGGATAAACC	GATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGGATAAACC	GCATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGGATAAACC	GAACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGGATAAACC	GCCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACC	GCCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGGATAAACC	GACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGGATAAACC	GAAACCGGACGAGGGCGCGCTAAAACGTGATTA
GAGTTCCCCGCGCCAGCGGGGATAAACC	GCCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGTGCCAGCGGGGATAAACC

>CP023061|1|1|1118185-1119006|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCA	GGAACTGGCGCTGCTGGAGCAAAACCCGGTAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCTGTTAGCCAAACATGTCGACCTGTTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCGGACGAGGGCGCGCTAAAACGTGATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGTGCCAGCGGGGATAAACCA

>CP023061|1|1|1118185-1119006|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCA	GGAACTGGCGCTGCTGGAGCAAAACCCGGTAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAAGGGCCGCATTGACGGCCCTGTGTTATCG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTAGCTGTTAGCCAAACATGTCGACCTGTTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTGGCGGTGGTGCTGTAATTCACACCGGTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCCCCCAGTCACCCCCGCCACCAAAATCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTTTCAGACTCATCAAAATAATCCTTTAAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CATTGCCTTTGCAGCGTCTTTCCGATCATTCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AACGTGAGATACGCCTCCCAGCGGCGCTCGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGTCAAACAGTATCACCGCGTTAACGCCCGC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCACACACGTCGAGCTGGTGGGGGTTAATGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ACACCTCTACTGACGTTCCTGAACAAGAAGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCGGACGAGGGCGCGCTAAAACGTGATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCTCTCAATTTGTAACGTCTGCAATGTCAGGC
GAGTTCCCCGTGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
CP023061.1\|AXV23715.1\|1115932_1116052_-\|hypothetical-protein	unknown	unknown	unknown
CP023061.1\|AXV23726.1\|1126463_1127243_+\|Putative-electron-transfer-flavoprotein-subunit-YgcR	unknown	unknown	gnl\|CDD\|224997
CP023061.1\|AXV23713.1\|1112925_1114563_+\|CTP-synthase	unknown	unknown	gnl\|CDD\|235437
CP023061.1\|AXV23714.1\|1114650_1115949_+\|Enolase	unknown	unknown	gnl\|CDD\|234617
CP023061.1\|AXV23724.1\|1123600_1125055_+\|putative-FAD-containing-dehydrogenase	unknown	unknown	gnl\|CDD\|223354
CP023061.1\|AXV23718.1\|1117173_1117845_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	unknown	unknown	gnl\|CDD\|275126
CP023061.1\|AXV23725.1\|1125076_1126486_+\|Inner-membrane-metabolite-transport-protein-YgcS	unknown	unknown	gnl\|CDD\|340929
CP023061.1\|AXV23721.1\|1119644_1121123_-\|Putative-sugar-kinase-YgcE	unknown	unknown	gnl\|CDD\|212662
CP023061.1\|AXV23709.1\|1108940_1111175_+\|Guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|182797
CP023061.1\|AXV23728.1\|1128247_1128823_-\|Glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
CP023061.1\|AXV23712.1\|1111906_1112698_+\|Nucleoside-triphosphate-pyrophosphohydrolase-MazG	unknown	unknown	gnl\|CDD\|236569
CP023061.1\|AXV23729.1\|1128839_1129100_-\|Ferredoxin-like-protein-YgcO	unknown	unknown	gnl\|CDD\|225289
CP023061.1\|AXV23717.1\|1116894_1117035_-\|hypothetical-protein	unknown	unknown	unknown
CP023061.1\|AXV23711.1\|1111500_1111836_+\|Programmed-cell-death-toxin-MazF	unknown	unknown	gnl\|CDD\|182138
CP023061.1\|AXV23722.1\|1121149_1122427_-\|Inner-membrane-protein-YqcE	unknown	unknown	gnl\|CDD\|349949
CP023061.1\|AXV23716.1\|1116008_1116713_-\|YgcG	unknown	unknown	gnl\|CDD\|224429
CP023061.1\|AXV23730.1\|1129090_1130362_-\|putative-electron-transfer-flavoprotein-quinone-oxidoreductase-YgcN	unknown	unknown	gnl\|CDD\|182194
CP023061.1\|AXV23723.1\|1122745_1123531_+\|2-deoxy-D-gluconate-3-dehydrogenase	unknown	unknown	gnl\|CDD\|187605
CP023061.1\|AXV23727.1\|1127239_1128100_+\|Putative-electron-transfer-flavoprotein-subunit-YgcQ	unknown	unknown	gnl\|CDD\|224936
CP023061.1\|AXV23710.1\|1111252_1111501_+\|Programmed-cell-death-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082

Protein	Function_ID	Function_description	E-value
CP023061.1\|AXV23726.1\|1126463_1127243_+\|Putative-electron-transfer-flavoprotein-subunit-YgcR	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
CP023061.1\|AXV23713.1\|1112925_1114563_+\|CTP-synthase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP023061.1\|AXV23711.1\|1111500_1111836_+\|Programmed-cell-death-toxin-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	2.42227e-74
CP023061.1\|AXV23724.1\|1123600_1125055_+\|putative-FAD-containing-dehydrogenase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.25325e-82
CP023061.1\|AXV23718.1\|1117173_1117845_+\|Queuosine-Biosynthesis-QueE-Radical-SAM	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
CP023061.1\|AXV23725.1\|1125076_1126486_+\|Inner-membrane-metabolite-transport-protein-YgcS	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.22441e-51
CP023061.1\|AXV23723.1\|1122745_1123531_+\|2-deoxy-D-gluconate-3-dehydrogenase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
CP023061.1\|AXV23728.1\|1128247_1128823_-\|Glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
CP023061.1\|AXV23709.1\|1108940_1111175_+\|Guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
CP023061.1\|AXV23729.1\|1128839_1129100_-\|Ferredoxin-like-protein-YgcO	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	3.6328e-41
CP023061.1\|AXV23712.1\|1111906_1112698_+\|Nucleoside-triphosphate-pyrophosphohydrolase-MazG	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
CP023061.1\|AXV23714.1\|1114650_1115949_+\|Enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP023061.1\|AXV23722.1\|1121149_1122427_-\|Inner-membrane-protein-YqcE	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	4.01972e-29
CP023061.1\|AXV23716.1\|1116008_1116713_-\|YgcG	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	6.181e-77
CP023061.1\|AXV23730.1\|1129090_1130362_-\|putative-electron-transfer-flavoprotein-quinone-oxidoreductase-YgcN	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	7.53866e-125
CP023061.1\|AXV23721.1\|1119644_1121123_-\|Putative-sugar-kinase-YgcE	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	5.94468e-108
CP023061.1\|AXV23727.1\|1127239_1128100_+\|Putative-electron-transfer-flavoprotein-subunit-YgcQ	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
CP023061.1\|AXV23710.1\|1111252_1111501_+\|Programmed-cell-death-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48

>CP023061.1|AXV23718.1|1117173_1117845_+|Queuosine-Biosynthesis-QueE-Radical-SAM
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>CP023061.1|AXV23717.1|1116894_1117035_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFIQI
>CP023061.1|AXV23716.1|1116008_1116713_-|YgcG
MQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALARDIIRSNMIPAFKQQKFAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVYISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGKSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>CP023061.1|AXV23715.1|1115932_1116052_-|hypothetical-protein
MAVLLEVAAHPAAGNSTIKNASPEAGIFKSDKVSLMPGL
>CP023061.1|AXV23714.1|1114650_1115949_+|Enolase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP023061.1|AXV23713.1|1112925_1114563_+|CTP-synthase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>CP023061.1|AXV23712.1|1111906_1112698_+|Nucleoside-triphosphate-pyrophosphohydrolase-MazG
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>CP023061.1|AXV23711.1|1111500_1111836_+|Programmed-cell-death-toxin-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPYTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>CP023061.1|AXV23710.1|1111252_1111501_+|Programmed-cell-death-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>CP023061.1|AXV23709.1|1108940_1111175_+|Guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>CP023061.1|AXV23721.1|1119644_1121123_-|Putative-sugar-kinase-YgcE
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTLAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWTWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>CP023061.1|AXV23722.1|1121149_1122427_-|Inner-membrane-protein-YqcE
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQFSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>CP023061.1|AXV23723.1|1122745_1123531_+|2-deoxy-D-gluconate-3-dehydrogenase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>CP023061.1|AXV23724.1|1123600_1125055_+|putative-FAD-containing-dehydrogenase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREVMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>CP023061.1|AXV23725.1|1125076_1126486_+|Inner-membrane-metabolite-transport-protein-YgcS
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTVFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>CP023061.1|AXV23726.1|1126463_1127243_+|Putative-electron-transfer-flavoprotein-subunit-YgcR
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>CP023061.1|AXV23727.1|1127239_1128100_+|Putative-electron-transfer-flavoprotein-subunit-YgcQ
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>CP023061.1|AXV23728.1|1128247_1128823_-|Glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>CP023061.1|AXV23729.1|1128839_1129100_-|Ferredoxin-like-protein-YgcO
MSVARNLWRVADAPHIVPADSVERQTAERLISACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>CP023061.1|AXV23730.1|1129090_1130362_-|putative-electron-transfer-flavoprotein-quinone-oxidoreductase-YgcN
MEDDCDIIIIGAGIAGTACALRCARSGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERCITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: CP023061_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023061_3

2372205-2372328

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023061_3

>merge|CP023061|3|2372205-2372328|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>CP023061|3|3|2372205-2372328|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
CP023061.1\|AXV24993.1\|2369210_2370023_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
CP023061.1\|AXV24997.1\|2373939_2375313_-\|Multi-antimicrobial-extrusion-protein	unknown	unknown	gnl\|CDD\|234981
CP023061.1\|AXV24987.1\|2364127_2364265_-\|hypothetical-protein	unknown	unknown	unknown
CP023061.1\|AXV24995.1\|2371764_2372070_-\|Protein-ydhR-precursor	unknown	unknown	gnl\|CDD\|182975
CP023061.1\|AXV24996.1\|2372642_2373899_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
CP023061.1\|AXV25003.1\|2381194_2381314_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341227
CP023061.1\|AXV25005.1\|2382794_2383376_-\|Superoxide-dismutase	unknown	unknown	gnl\|CDD\|182534
CP023061.1\|AXV24998.1\|2375527_2376169_+\|Riboflavin-synthase-eubacterial/eukaryotic	unknown	unknown	gnl\|CDD\|183846
CP023061.1\|AXV24990.1\|2367054_2367693_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182160
CP023061.1\|AXV24986.1\|2363666_2363837_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182359
CP023061.1\|AXV25000.1\|2377647_2378859_-\|Putative-transport-protein	unknown	unknown	gnl\|CDD\|182924
CP023061.1\|AXV24992.1\|2368421_2369207_+\|Thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
CP023061.1\|AXV24991.1\|2367870_2368425_+\|NrfC-protein	unknown	unknown	gnl\|CDD\|223514
CP023061.1\|AXV24999.1\|2376208_2377357_-\|Cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
CP023061.1\|AXV24988.1\|2364292_2364919_+\|putative-oxidoreductase,-Fe-S-subunit	unknown	unknown	gnl\|CDD\|182135
CP023061.1\|AXV24994.1\|2370034_2371639_-\|putative-dibenzothiophene-desulfurization-enzyme	unknown	unknown	gnl\|CDD\|182134
CP023061.1\|AXV25004.1\|2381479_2382649_+\|Putative-transport-protein	unknown	unknown	gnl\|CDD\|225371
CP023061.1\|AXV25001.1\|2378971_2379904_+\|LysR-family-transcriptional-regulator-YdhB	unknown	unknown	gnl\|CDD\|182948
CP023061.1\|AXV25002.1\|2379900_2380926_-\|Purine-nucleotide-synthesis-repressor	unknown	unknown	gnl\|CDD\|236739
CP023061.1\|AXV24989.1\|2364939_2367042_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236629

Protein	Function_ID	Function_description	E-value
CP023061.1\|AXV24993.1\|2369210_2370023_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	8.20825e-175
CP023061.1\|AXV25002.1\|2379900_2380926_-\|Purine-nucleotide-synthesis-repressor	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
CP023061.1\|AXV24992.1\|2368421_2369207_+\|Thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.73962e-162
CP023061.1\|AXV24995.1\|2371764_2372070_-\|Protein-ydhR-precursor	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
CP023061.1\|AXV24996.1\|2372642_2373899_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
CP023061.1\|AXV25003.1\|2381194_2381314_+\|hypothetical-protein	gnl\|CDD\|341227	PRK14756, small_mem_YnhF, YnhF family membrane protein; Validated.	8.33023e-06
CP023061.1\|AXV25005.1\|2382794_2383376_-\|Superoxide-dismutase	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
CP023061.1\|AXV24998.1\|2375527_2376169_+\|Riboflavin-synthase-eubacterial/eukaryotic	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
CP023061.1\|AXV24990.1\|2367054_2367693_+\|hypothetical-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	1.44183e-120
CP023061.1\|AXV24986.1\|2363666_2363837_+\|hypothetical-protein	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	8.7801e-27
CP023061.1\|AXV25000.1\|2377647_2378859_-\|Putative-transport-protein	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
CP023061.1\|AXV24997.1\|2373939_2375313_-\|Multi-antimicrobial-extrusion-protein	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
CP023061.1\|AXV24991.1\|2367870_2368425_+\|NrfC-protein	gnl\|CDD\|223514	COG0437, HybA, Fe-S-cluster-containing hydrogenase components 1 [Energy production and conversion].	1.3074e-63
CP023061.1\|AXV24999.1\|2376208_2377357_-\|Cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
CP023061.1\|AXV24988.1\|2364292_2364919_+\|putative-oxidoreductase,-Fe-S-subunit	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
CP023061.1\|AXV24994.1\|2370034_2371639_-\|putative-dibenzothiophene-desulfurization-enzyme	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
CP023061.1\|AXV25004.1\|2381479_2382649_+\|Putative-transport-protein	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
CP023061.1\|AXV25001.1\|2378971_2379904_+\|LysR-family-transcriptional-regulator-YdhB	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
CP023061.1\|AXV24989.1\|2364939_2367042_+\|hypothetical-protein	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0

>CP023061.1|AXV24995.1|2371764_2372070_-|Protein-ydhR-precursor
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>CP023061.1|AXV24994.1|2370034_2371639_-|putative-dibenzothiophene-desulfurization-enzyme
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>CP023061.1|AXV24993.1|2369210_2370023_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC
>CP023061.1|AXV24992.1|2368421_2369207_+|Thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSVTDYGEKIYLYCKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>CP023061.1|AXV24991.1|2367870_2368425_+|NrfC-protein
MIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>CP023061.1|AXV24990.1|2367054_2367693_+|hypothetical-protein
MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSVAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>CP023061.1|AXV24989.1|2364939_2367042_+|hypothetical-protein
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>CP023061.1|AXV24988.1|2364292_2364919_+|putative-oxidoreductase,-Fe-S-subunit
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>CP023061.1|AXV24987.1|2364127_2364265_-|hypothetical-protein
MLTIQQPDIKHSTNTLLTLSPTPDIFPNPIVYEKRFNADKLILYG
>CP023061.1|AXV24986.1|2363666_2363837_+|hypothetical-protein
MCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>CP023061.1|AXV24996.1|2372642_2373899_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>CP023061.1|AXV24997.1|2373939_2375313_-|Multi-antimicrobial-extrusion-protein
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVIILQRASR
>CP023061.1|AXV24998.1|2375527_2376169_+|Riboflavin-synthase-eubacterial/eukaryotic
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>CP023061.1|AXV24999.1|2376208_2377357_-|Cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>CP023061.1|AXV25000.1|2377647_2378859_-|Putative-transport-protein
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>CP023061.1|AXV25001.1|2378971_2379904_+|LysR-family-transcriptional-regulator-YdhB
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>CP023061.1|AXV25002.1|2379900_2380926_-|Purine-nucleotide-synthesis-repressor
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>CP023061.1|AXV25003.1|2381194_2381314_+|hypothetical-protein
MCGNKKGENLMSTDLKFSLVTTIIVLGLIVAVGLTAALH
>CP023061.1|AXV25004.1|2381479_2382649_+|Putative-transport-protein
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>CP023061.1|AXV25005.1|2382794_2383376_-|Superoxide-dismutase
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: CP023061_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023061_5

3566510-3566654

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023061_5

>merge|CP023061|5|3566510-3566654|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>CP023061|5|5|3566510-3566654|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
CP023061.1\|AXV26298.1\|3569121_3570555_-\|2-oxoglutarate/malate-translocator	unknown	unknown	gnl\|CDD\|279307
CP023061.1\|AXV26297.1\|3566677_3568939_-\|Putative-enzyme	unknown	unknown	gnl\|CDD\|183125
CP023061.1\|AXV26299.1\|3570630_3571629_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380230
CP023061.1\|AXV26291.1\|3560164_3560920_-\|Biotin-synthesis-protein-BioC	unknown	unknown	gnl\|CDD\|182340
CP023061.1\|AXV26300.1\|3571768_3571897_-\|hypothetical-protein	unknown	unknown	unknown
CP023061.1\|AXV26304.1\|3574829_3575888_-\|Molybdenum-transport-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
CP023061.1\|AXV26306.1\|3576579_3577353_-\|Molybdenum-ABC-transporter,-periplasmic-molybdenum-binding-protein-ModA	unknown	unknown	gnl\|CDD\|182641
CP023061.1\|AXV26303.1\|3573908_3574829_+\|Putative-phosphatase	unknown	unknown	gnl\|CDD\|182523
CP023061.1\|AXV26302.1\|3572860_3573856_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
CP023061.1\|AXV26290.1\|3559494_3560172_-\|Dethiobiotin-synthetase	unknown	unknown	gnl\|CDD\|234625
CP023061.1\|AXV26287.1\|3554408_3555398_-\|Molybdenum-cofactor-biosynthesis-protein-MoaA	unknown	unknown	gnl\|CDD\|234672
CP023061.1\|AXV26301.1\|3571866_3572820_+\|LysR-family-transcriptional-regulator-YbhD	unknown	unknown	gnl\|CDD\|176131
CP023061.1\|AXV26294.1\|3563241_3564474_+\|Adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	unknown	unknown	gnl\|CDD\|181189
CP023061.1\|AXV26305.1\|3575890_3576580_-\|Molybdenum-transport-system-permease-protein-ModB	unknown	unknown	gnl\|CDD\|181841
CP023061.1\|AXV26292.1\|3560906_3562061_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
CP023061.1\|AXV26295.1\|3564532_3565009_+\|protein-ybhB	unknown	unknown	gnl\|CDD\|182339
CP023061.1\|AXV26288.1\|3555794_3556703_+\|Putative-structural-protein	unknown	unknown	gnl\|CDD\|211689
CP023061.1\|AXV26296.1\|3565160_3566444_+\|Pectinesterase	unknown	unknown	gnl\|CDD\|236709
CP023061.1\|AXV26289.1\|3556894_3558916_-\|Excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
CP023061.1\|AXV26293.1\|3562057_3563098_-\|Biotin-synthase	unknown	unknown	gnl\|CDD\|185063

Protein	Function_ID	Function_description	E-value
CP023061.1\|AXV26298.1\|3569121_3570555_-\|2-oxoglutarate/malate-translocator	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
CP023061.1\|AXV26297.1\|3566677_3568939_-\|Putative-enzyme	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0
CP023061.1\|AXV26299.1\|3570630_3571629_-\|hypothetical-protein	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
CP023061.1\|AXV26291.1\|3560164_3560920_-\|Biotin-synthesis-protein-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.57982e-172
CP023061.1\|AXV26304.1\|3574829_3575888_-\|Molybdenum-transport-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
CP023061.1\|AXV26306.1\|3576579_3577353_-\|Molybdenum-ABC-transporter,-periplasmic-molybdenum-binding-protein-ModA	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
CP023061.1\|AXV26303.1\|3573908_3574829_+\|Putative-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
CP023061.1\|AXV26302.1\|3572860_3573856_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
CP023061.1\|AXV26290.1\|3559494_3560172_-\|Dethiobiotin-synthetase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	7.09172e-110
CP023061.1\|AXV26287.1\|3554408_3555398_-\|Molybdenum-cofactor-biosynthesis-protein-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
CP023061.1\|AXV26301.1\|3571866_3572820_+\|LysR-family-transcriptional-regulator-YbhD	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
CP023061.1\|AXV26294.1\|3563241_3564474_+\|Adenosylmethionine-8-amino-7-oxononanoate-aminotransferase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
CP023061.1\|AXV26305.1\|3575890_3576580_-\|Molybdenum-transport-system-permease-protein-ModB	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	9.04539e-146
CP023061.1\|AXV26292.1\|3560906_3562061_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
CP023061.1\|AXV26295.1\|3564532_3565009_+\|protein-ybhB	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
CP023061.1\|AXV26288.1\|3555794_3556703_+\|Putative-structural-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
CP023061.1\|AXV26296.1\|3565160_3566444_+\|Pectinesterase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
CP023061.1\|AXV26289.1\|3556894_3558916_-\|Excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
CP023061.1\|AXV26293.1\|3562057_3563098_-\|Biotin-synthase	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0

>CP023061.1|AXV26296.1|3565160_3566444_+|Pectinesterase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>CP023061.1|AXV26295.1|3564532_3565009_+|protein-ybhB
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>CP023061.1|AXV26294.1|3563241_3564474_+|Adenosylmethionine-8-amino-7-oxononanoate-aminotransferase
MTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>CP023061.1|AXV26293.1|3562057_3563098_-|Biotin-synthase
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>CP023061.1|AXV26292.1|3560906_3562061_-|8-amino-7-oxononanoate-synthase
MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLARLLASPCPGQQLVVTEGVFSMDGDIAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>CP023061.1|AXV26291.1|3560164_3560920_-|Biotin-synthesis-protein-BioC
MATVNKQAIAAAFGRAAALYEQHADLQRQSADVLLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>CP023061.1|AXV26290.1|3559494_3560172_-|Dethiobiotin-synthetase
MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGSEKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>CP023061.1|AXV26289.1|3556894_3558916_-|Excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>CP023061.1|AXV26288.1|3555794_3556703_+|Putative-structural-protein
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>CP023061.1|AXV26287.1|3554408_3555398_-|Molybdenum-cofactor-biosynthesis-protein-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>CP023061.1|AXV26297.1|3566677_3568939_-|Putative-enzyme
MIKLSEKGVFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>CP023061.1|AXV26298.1|3569121_3570555_-|2-oxoglutarate/malate-translocator
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>CP023061.1|AXV26299.1|3570630_3571629_-|hypothetical-protein
MLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>CP023061.1|AXV26300.1|3571768_3571897_-|hypothetical-protein
MPSYLIIHASLLLRKMEATILGGWSLKILTAFSQLKLMKKCY
>CP023061.1|AXV26301.1|3571866_3572820_+|LysR-family-transcriptional-regulator-YbhD
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>CP023061.1|AXV26302.1|3572860_3573856_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>CP023061.1|AXV26303.1|3573908_3574829_+|Putative-phosphatase
MAVNAELKRRILSDSGIGVPFAQTKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>CP023061.1|AXV26304.1|3574829_3575888_-|Molybdenum-transport-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMAKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQCLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELVIKPGLWLYAQIKSVSITA
>CP023061.1|AXV26305.1|3575890_3576580_-|Molybdenum-transport-system-permease-protein-ModB
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITIPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>CP023061.1|AXV26306.1|3576579_3577353_-|Molybdenum-ABC-transporter,-periplasmic-molybdenum-binding-protein-ModA
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQTLLGNSLVVVAPKASEQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK

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Crispr_ID: CP023061_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP023061_6

3806480-3806576

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP023061_6

>merge|CP023061|6|3806480-3806576|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>CP023061|6|6|3806480-3806576|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
CP023061.1\|AXV26516.1\|3804841_3805351_+\|Phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	unknown	unknown	gnl\|CDD\|223119
CP023061.1\|AXV26520.1\|3808325_3809585_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377673
CP023061.1\|AXV26509.1\|3799177_3799720_-\|type-1-fimbriae-major-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
CP023061.1\|AXV26523.1\|3812649_3813885_+\|Allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|274471
CP023061.1\|AXV26513.1\|3801945_3803331_-\|Cysteinyl-tRNA-synthetase	unknown	unknown	gnl\|CDD\|234705
CP023061.1\|AXV26519.1\|3807499_3808315_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378658
CP023061.1\|AXV26514.1\|3803504_3803999_+\|Peptidyl-prolyl-cis-trans-isomerase-PpiB	unknown	unknown	gnl\|CDD\|182734
CP023061.1\|AXV26518.1\|3806609_3807503_-\|Carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
CP023061.1\|AXV26511.1\|3801068_3801281_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183166
CP023061.1\|AXV26508.1\|3798265_3798958_-\|Fimbrial-periplasmic-chaperone-SfmC	unknown	unknown	gnl\|CDD\|185117
CP023061.1\|AXV26510.1\|3800200_3801067_+\|Methylenetetrahydrofolate-dehydrogenase-(NADP+)-/-Methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|236760
CP023061.1\|AXV26522.1\|3811578_3812628_+\|Ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
CP023061.1\|AXV26521.1\|3809594_3811262_-\|Protein-fdrA	unknown	unknown	gnl\|CDD\|180395
CP023061.1\|AXV26524.1\|3813895_3814681_+\|Ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|225796
CP023061.1\|AXV26526.1\|3814809_3815955_-\|Glycerate-kinase	unknown	unknown	gnl\|CDD\|182152
CP023061.1\|AXV26517.1\|3805347_3806415_+\|Phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	unknown	unknown	gnl\|CDD\|235674
CP023061.1\|AXV26525.1\|3814711_3814828_+\|hypothetical-protein	unknown	unknown	unknown
CP023061.1\|AXV26527.1\|3815976_3817278_-\|Xanthine-permease	unknown	unknown	gnl\|CDD\|183124
CP023061.1\|AXV26515.1\|3804001_3804724_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
CP023061.1\|AXV26512.1\|3801388_3801910_+\|Putative-membrane-bound-metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899

Protein	Function_ID	Function_description	E-value
CP023061.1\|AXV26516.1\|3804841_3805351_+\|Phosphoribosylaminoimidazole-carboxylase-catalytic-subunit	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
CP023061.1\|AXV26520.1\|3808325_3809585_-\|hypothetical-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.67788e-130
CP023061.1\|AXV26509.1\|3799177_3799720_-\|type-1-fimbriae-major-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
CP023061.1\|AXV26523.1\|3812649_3813885_+\|Allantoate-amidohydrolase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
CP023061.1\|AXV26513.1\|3801945_3803331_-\|Cysteinyl-tRNA-synthetase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
CP023061.1\|AXV26519.1\|3807499_3808315_-\|hypothetical-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.28312e-37
CP023061.1\|AXV26514.1\|3803504_3803999_+\|Peptidyl-prolyl-cis-trans-isomerase-PpiB	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
CP023061.1\|AXV26518.1\|3806609_3807503_-\|Carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
CP023061.1\|AXV26511.1\|3801068_3801281_+\|hypothetical-protein	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
CP023061.1\|AXV26508.1\|3798265_3798958_-\|Fimbrial-periplasmic-chaperone-SfmC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	5.84958e-149
CP023061.1\|AXV26510.1\|3800200_3801067_+\|Methylenetetrahydrofolate-dehydrogenase-(NADP+)-/-Methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
CP023061.1\|AXV26522.1\|3811578_3812628_+\|Ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
CP023061.1\|AXV26521.1\|3809594_3811262_-\|Protein-fdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
CP023061.1\|AXV26524.1\|3813895_3814681_+\|Ureidoglycine-aminohydrolase	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	4.36926e-152
CP023061.1\|AXV26526.1\|3814809_3815955_-\|Glycerate-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
CP023061.1\|AXV26517.1\|3805347_3806415_+\|Phosphoribosylaminoimidazole-carboxylase-ATPase-subunit	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	1.30115e-179
CP023061.1\|AXV26527.1\|3815976_3817278_-\|Xanthine-permease	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
CP023061.1\|AXV26515.1\|3804001_3804724_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	1.37025e-165
CP023061.1\|AXV26512.1\|3801388_3801910_+\|Putative-membrane-bound-metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	7.12373e-31

>CP023061.1|AXV26517.1|3805347_3806415_+|Phosphoribosylaminoimidazole-carboxylase-ATPase-subunit
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLADRSEWPAVFERLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNSPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>CP023061.1|AXV26516.1|3804841_3805351_+|Phosphoribosylaminoimidazole-carboxylase-catalytic-subunit
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>CP023061.1|AXV26515.1|3804001_3804724_+|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>CP023061.1|AXV26514.1|3803504_3803999_+|Peptidyl-prolyl-cis-trans-isomerase-PpiB
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>CP023061.1|AXV26513.1|3801945_3803331_-|Cysteinyl-tRNA-synthetase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>CP023061.1|AXV26512.1|3801388_3801910_+|Putative-membrane-bound-metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLICCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMVLMGMLWWRRR
>CP023061.1|AXV26511.1|3801068_3801281_+|hypothetical-protein
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>CP023061.1|AXV26510.1|3800200_3801067_+|Methylenetetrahydrofolate-dehydrogenase-(NADP+)-/-Methenyltetrahydrofolate-cyclohydrolase
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>CP023061.1|AXV26509.1|3799177_3799720_-|type-1-fimbriae-major-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>CP023061.1|AXV26508.1|3798265_3798958_-|Fimbrial-periplasmic-chaperone-SfmC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVSSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>CP023061.1|AXV26518.1|3806609_3807503_-|Carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>CP023061.1|AXV26519.1|3807499_3808315_-|hypothetical-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>CP023061.1|AXV26520.1|3808325_3809585_-|hypothetical-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNPGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMEHGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>CP023061.1|AXV26521.1|3809594_3811262_-|Protein-fdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTDFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSLALTQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHHHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPALRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLMENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>CP023061.1|AXV26522.1|3811578_3812628_+|Ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAEQNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPLAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>CP023061.1|AXV26523.1|3812649_3813885_+|Allantoate-amidohydrolase
MITHFRQAIEETLPWLSSFGADPTGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVILSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCESEKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>CP023061.1|AXV26524.1|3813895_3814681_+|Ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>CP023061.1|AXV26525.1|3814711_3814828_+|hypothetical-protein
MLDFATVYTVAFFVVNSGKKRCDINRIRFKGKGQFLIP
>CP023061.1|AXV26526.1|3814809_3815955_-|Glycerate-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>CP023061.1|AXV26527.1|3815976_3817278_-|Xanthine-permease
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLGMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP023061_4	4.1\|3216056\|40\|CP023061\|CRISPRCasFinder	3216056-3216095	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
CP023061_3	3.1\|2372248\|38\|CP023061\|CRISPRCasFinder	2372248-2372285	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP038598	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence	2051-2083	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP033827	Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence	692-724	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP029125	Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence	518-550	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	2811-2843	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP030192	Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence	1835-1867	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP039274	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence	118-150	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP016528	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence	52-84	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP030227	Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence	3123-3155	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NC_013090	Endophytic bacterium LOB-07 plasmid pLK39, complete sequence	52-84	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP030009	Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence	2572-2604	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP011606	Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence	3835-3867	7	0.788
CP023061_1	1.2\|1118274\|33\|CP023061\|PILER-CR	1118274-1118306	33	NZ_CP044113	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence	3638-3670	7	0.788
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP038598	Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence	2052-2083	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP033827	Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence	693-724	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP029125	Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence	518-549	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_AP019693	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence	2812-2843	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP030192	Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence	1835-1866	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP039274	Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence	118-149	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP016528	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence	53-84	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP030227	Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence	3124-3155	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NC_013090	Endophytic bacterium LOB-07 plasmid pLK39, complete sequence	53-84	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP030009	Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence	2572-2603	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP011606	Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence	3835-3866	7	0.781
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NZ_CP044113	Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence	3639-3670	7	0.781
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	MN693005	Marine virus AFVG_117M50, complete genome	6262-6293	7	0.781
CP023061_1	1.1\|1118213\|33\|CP023061\|PILER-CR	1118213-1118245	33	NZ_CP012265	Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence	26062-26094	8	0.758
CP023061_1	1.6\|1118518\|33\|CP023061\|PILER-CR	1118518-1118550	33	MN693005	Marine virus AFVG_117M50, complete genome	6262-6294	8	0.758
CP023061_1	1.11\|1118823\|33\|CP023061\|PILER-CR	1118823-1118855	33	MK016501	Mycobacterium phage Nebkiss, complete genome	21453-21485	8	0.758
CP023061_1	1.11\|1118823\|33\|CP023061\|PILER-CR	1118823-1118855	33	NC_026590	Mycobacterium phage Gaia, complete genome	21452-21484	8	0.758
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP012265	Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence	26063-26094	8	0.75
CP023061_1	1.15\|1118275\|32\|CP023061\|CRISPRCasFinder,CRT	1118275-1118306	32	NC_019341	Pseudomonas syringae plasmid pNCPPB880-40, complete sequence	6612-6643	8	0.75
CP023061_1	1.17\|1118397\|32\|CP023061\|CRISPRCasFinder,CRT	1118397-1118428	32	AB452989	Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds	1966-1997	8	0.75
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	MK295204	Shigella phage vB_SdyM_006, complete genome	16122-16153	8	0.75
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	MG696114	Proteus phage phiP4-3, complete genome	149804-149835	8	0.75
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	NZ_CP017949	Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence	58006-58037	8	0.75
CP023061_1	1.22\|1118702\|32\|CP023061\|CRISPRCasFinder,CRT	1118702-1118733	32	NZ_CP010769	Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence	121002-121033	8	0.75
CP023061_1	1.24\|1118824\|32\|CP023061\|CRISPRCasFinder,CRT	1118824-1118855	32	MK016501	Mycobacterium phage Nebkiss, complete genome	21454-21485	8	0.75
CP023061_1	1.24\|1118824\|32\|CP023061\|CRISPRCasFinder,CRT	1118824-1118855	32	NC_026590	Mycobacterium phage Gaia, complete genome	21453-21484	8	0.75
CP023061_1	1.6\|1118518\|33\|CP023061\|PILER-CR	1118518-1118550	33	MK295204	Shigella phage vB_SdyM_006, complete genome	16121-16153	9	0.727
CP023061_1	1.6\|1118518\|33\|CP023061\|PILER-CR	1118518-1118550	33	MG696114	Proteus phage phiP4-3, complete genome	149804-149836	9	0.727
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	460266-460297	9	0.719
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	5394-5425	9	0.719
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	KC821606	Cellulophaga phage phi12:2, complete genome	1257-1288	9	0.719
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	KT070867	Bacillus phage PBC2, complete genome	154855-154886	9	0.719
CP023061_1	1.6\|1118518\|33\|CP023061\|PILER-CR	1118518-1118550	33	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	5394-5426	10	0.697
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1538980-1539011	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1187025-1187056	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1615960-1615991	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1459996-1460027	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1531874-1531905	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1459018-1459049	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1526371-1526402	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1526372-1526403	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1459988-1460019	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1459341-1459372	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1459978-1460009	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1539145-1539176	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1539126-1539157	10	0.688
CP023061_1	1.14\|1118214\|32\|CP023061\|CRISPRCasFinder,CRT	1118214-1118245	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1539107-1539138	10	0.688
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	KC821631	Cellulophaga phage phi48:1, complete genome	1257-1288	10	0.688
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	KC821628	Cellulophaga phage phi18:4, complete genome	1257-1288	10	0.688
CP023061_1	1.19\|1118519\|32\|CP023061\|CRISPRCasFinder,CRT	1118519-1118550	32	NC_021805	Cellulophaga phage phi12a:1, complete genome	1257-1288	10	0.688
CP023061_1	1.23\|1118763\|32\|CP023061\|CRISPRCasFinder,CRT	1118763-1118794	32	KU160664	Arthrobacter phage Salgado, complete genome	140-171	11	0.656
CP023061_1	1.23\|1118763\|32\|CP023061\|CRISPRCasFinder,CRT	1118763-1118794	32	MF140418	Arthrobacter phage LiSara, complete genome	140-171	11	0.656
CP023061_1	1.23\|1118763\|32\|CP023061\|CRISPRCasFinder,CRT	1118763-1118794	32	KU160654	Arthrobacter phage Laroye, complete genome	140-171	11	0.656

1. spacer 4.1|3216056|40|CP023061|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 3.1|2372248|38|CP023061|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

3. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

4. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

5. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

6. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

7. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

8. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

9. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

10. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

11. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

12. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

13. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

14. spacer 1.2|1118274|33|CP023061|PILER-CR matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.788

gaaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
gaaaagggccgcattagcggccc----ttttcggaga	Protospacer
***************..******    ** ***

15. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP038598 (Salmonella enterica subsp. enterica serovar Hadar strain 12-2388 plasmid p12-2388.3, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

16. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP033827 (Klebsiella sp. FDAARGOS_511 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

17. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP029125 (Enterobacter hormaechei strain AR432 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

18. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_AP019693 (Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013 plasmid pSL180013-1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

19. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP030192 (Salmonella enterica strain SA20104250 plasmid pSA20104250.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

20. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP039274 (Salmonella enterica subsp. enterica serovar Senftenberg str. CFSAN004025 plasmid pCFSAN004025.4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

21. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP016528 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

22. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP030227 (Salmonella enterica strain SA20041605 plasmid pSA20041605.2, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

23. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NC_013090 (Endophytic bacterium LOB-07 plasmid pLK39, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

24. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP030009 (Enterobacter hormaechei subsp. xiangfangensis strain Pb204 plasmid pPb204002, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

25. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP011606 (Citrobacter freundii strain CAV1321 plasmid pCAV1321-4310, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

26. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP044113 (Klebsiella michiganensis strain FDAARGOS_647 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

aaaagggccgcattgacggccctgtgttatcg----	CRISPR spacer
aaaagggccgcattagcggccc----ttttcggaga	Protospacer
**************..******    ** ***

27. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 7, identity: 0.781

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
tttgttcatactcatcaaaataatctataact	Protospacer
 ** **** ****************. * * *

28. spacer 1.1|1118213|33|CP023061|PILER-CR matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.758

aggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
aagaactggcgctgctggagaaaatccgcaaag	Protospacer
*.****************** *** **  . *

29. spacer 1.6|1118518|33|CP023061|PILER-CR matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 8, identity: 0.758

gatttttcagactcatcaaaataatcctttaat	CRISPR spacer
ctttgttcatactcatcaaaataatctataact	Protospacer
  ** **** ****************. * * *

30. spacer 1.11|1118823|33|CP023061|PILER-CR matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.758

gacacctctactgacgttcctgaacaagaagat	CRISPR spacer
gacacctccactggcgttcctgaacgtattcat	Protospacer
********.****.***********. .   **

31. spacer 1.11|1118823|33|CP023061|PILER-CR matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.758

gacacctctactgacgttcctgaacaagaagat	CRISPR spacer
gacacctccactggcgttcctgaacgtattcat	Protospacer
********.****.***********. .   **

32. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP012265 (Cronobacter condimenti 1330 strain LMG 26250 plasmid pCCO1, complete sequence) position: , mismatch: 8, identity: 0.75

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
agaactggcgctgctggagaaaatccgcaaag	Protospacer
.****************** *** **  . *

33. spacer 1.15|1118275|32|CP023061|CRISPRCasFinder,CRT matches to NC_019341 (Pseudomonas syringae plasmid pNCPPB880-40, complete sequence) position: , mismatch: 8, identity: 0.75

aaaagggccgcattgacggccctgtgttatcg	CRISPR spacer
aaaagggccgcattagcggcccttttaatttg	Protospacer
**************..******* *    *.*

34. spacer 1.17|1118397|32|CP023061|CRISPRCasFinder,CRT matches to AB452989 (Serratia phage KSP20 orf7 to orf11 genes for scaffolding protein, major capsid protein, terminase, head completion protein, hypothetical protein, complete and partial cds) position: , mismatch: 8, identity: 0.75

gggtggcggtggtgctgtaattcacaccggta	CRISPR spacer
ggcgcgtggtggtgctgttgttcacaccggcc	Protospacer
**   *.*********** .**********.

35. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 8, identity: 0.75

atttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
gtttttcataatcatcaaaataatc-----atgacca	Protospacer
.******* * **************     **

36. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 8, identity: 0.75

atttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
gtttttcataatcatcaaaataatc-----atgacca	Protospacer
.******* * **************     **

37. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

-----atttttcagactcatcaaaataatcctttaat	CRISPR spacer
cagtgatt-----aacccatctaaataatcctttaat	Protospacer
     ***     .**.**** ***************

38. spacer 1.22|1118702|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP010769 (Phaeobacter piscinae strain P13 plasmid pP13_b, complete sequence) position: , mismatch: 8, identity: 0.75

ccgtcaaacagtatcaccgcgttaacgcccgc	CRISPR spacer
cccacaaacagtagcatcgcgttaacgatcaa	Protospacer
**  ********* **.********** .*.

39. spacer 1.24|1118824|32|CP023061|CRISPRCasFinder,CRT matches to MK016501 (Mycobacterium phage Nebkiss, complete genome) position: , mismatch: 8, identity: 0.75

acacctctactgacgttcctgaacaagaagat	CRISPR spacer
acacctccactggcgttcctgaacgtattcat	Protospacer
*******.****.***********. .   **

40. spacer 1.24|1118824|32|CP023061|CRISPRCasFinder,CRT matches to NC_026590 (Mycobacterium phage Gaia, complete genome) position: , mismatch: 8, identity: 0.75

acacctctactgacgttcctgaacaagaagat	CRISPR spacer
acacctccactggcgttcctgaacgtattcat	Protospacer
*******.****.***********. .   **

41. spacer 1.6|1118518|33|CP023061|PILER-CR matches to MK295204 (Shigella phage vB_SdyM_006, complete genome) position: , mismatch: 9, identity: 0.727

gatttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
cgtttttcataatcatcaaaataatc-----atgacca	Protospacer
 .******* * **************     **

42. spacer 1.6|1118518|33|CP023061|PILER-CR matches to MG696114 (Proteus phage phiP4-3, complete genome) position: , mismatch: 9, identity: 0.727

gatttttcagactcatcaaaataatcctttaat-----	CRISPR spacer
cgtttttcataatcatcaaaataatc-----atgacca	Protospacer
 .******* * **************     **

43. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
ggccaaggcgctgctggaacagaacccggacc	Protospacer
**    ************.**.*******  .

44. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
ccctatcatattcatcaaaataatcctttgcg	Protospacer
 ..* *** *.******************.

45. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to KC821606 (Cellulophaga phage phi12:2, complete genome) position: , mismatch: 9, identity: 0.719

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
gttttttaaactcatcaaaataataacctacc	Protospacer
.*****.*.***************  ..** .

46. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to KT070867 (Bacillus phage PBC2, complete genome) position: , mismatch: 9, identity: 0.719

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
atttttcagacttatcaaaagaacagtcggaa	Protospacer
************.******* **.  *. .*

47. spacer 1.6|1118518|33|CP023061|PILER-CR matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 10, identity: 0.697

gatttttcagactcatcaaaataatcctttaat	CRISPR spacer
tccctatcatattcatcaaaataatcctttgcg	Protospacer
  ..* *** *.******************.

48. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

49. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
cctgctggcggtgctggagcagaaccccgcgg	Protospacer
   .****** **********.***** *..

50. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

51. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

52. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

53. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

54. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

55. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

56. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

57. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

58. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

59. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

60. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

61. spacer 1.14|1118214|32|CP023061|CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggaactggcgctgctggagcaaaacccggtat	CRISPR spacer
tcaactggcgctgctggaggacaacgagcggc	Protospacer
  ***************** * ***  *  ..

62. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to KC821631 (Cellulophaga phage phi48:1, complete genome) position: , mismatch: 10, identity: 0.688

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
gttttttaaactcatcaaaataataacccacc	Protospacer
.*****.*.***************  ...* .

63. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to KC821628 (Cellulophaga phage phi18:4, complete genome) position: , mismatch: 10, identity: 0.688

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
gttttttaaactcatcaaaataataacccacc	Protospacer
.*****.*.***************  ...* .

64. spacer 1.19|1118519|32|CP023061|CRISPRCasFinder,CRT matches to NC_021805 (Cellulophaga phage phi12a:1, complete genome) position: , mismatch: 10, identity: 0.688

atttttcagactcatcaaaataatcctttaat	CRISPR spacer
gttttttaaactcatcaaaataataacccacc	Protospacer
.*****.*.***************  ...* .

65. spacer 1.23|1118763|32|CP023061|CRISPRCasFinder,CRT matches to KU160664 (Arthrobacter phage Salgado, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

66. spacer 1.23|1118763|32|CP023061|CRISPRCasFinder,CRT matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

67. spacer 1.23|1118763|32|CP023061|CRISPRCasFinder,CRT matches to KU160654 (Arthrobacter phage Laroye, complete genome) position: , mismatch: 11, identity: 0.656

ccacacacgtcgagctggtgggggttaatgct	CRISPR spacer
aacggggcgtcgggctggtgggggtgaatgta	Protospacer
    . .*****.************ ****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

868339 : 880036

Stx2-converting_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV23475.1\|868339_868531_+	Mobile element protein	A0A2I6AZV9	Macacine_betaherpesvirus	2.2e-15	61.9
AXV23476.1\|868863_869049_-	Mobile element protein	A0A0P0ZBS5	Stx2-converting_phage	2.6e-21	72.4
AXV23477.1\|869112_870246_+	Mobile element protein	NA	NA	NA	NA
AXV23478.1\|870355_871924_-	Mobile element protein	A0A0P0ZEB3	Stx2-converting_phage	5.6e-141	59.9
AXV23479.1\|871954_872251_-	Mobile element protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-30	60.2
AXV23480.1\|872301_872736_-	Mobile element protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3
AXV23481.1\|872844_873276_+	Mobile element protein	A0A0P0ZBS5	Stx2-converting_phage	2.1e-77	99.3
AXV23482.1\|873338_873557_+	Mobile element protein	NA	NA	NA	NA
AXV23483.1\|873707_877043_-\|protease	Per-activated serine protease autotransporter enterotoxin EspC	Q9LA54	Enterobacteria_phage	2.1e-262	44.2
AXV23484.1\|878612_879689_-	Mobile element protein	NA	NA	NA	NA
AXV23485.1\|879907_880036_-	Mobile element protein	Q716C2	Shigella_phage	6.2e-06	88.0

DBSCAN-SWA_2

1161151 : 1168291

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV23766.1\|1161151_1161790_-	Ribulose-5-phosphate 4-epimerase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
AXV23767.1\|1161786_1163049_-	hypothetical protein	A0A077SLJ7	Escherichia_phage	1.3e-135	61.4
AXV23768.1\|1163045_1163954_-	D-beta-hydroxybutyrate dehydrogenase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
AXV23769.1\|1164149_1164917_+	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	3.3e-70	56.7
AXV23770.1\|1164967_1165624_-	Serine/threonine protein phosphatase 2	A0A077SLQ6	Escherichia_phage	1.5e-50	46.8
AXV23771.1\|1165729_1168291_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.7e-30	20.6

DBSCAN-SWA_3

1246103 : 1252460

Enterobacteria_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV23859.1\|1246103_1246781_-\|transposase	transposase	Q716C2	Shigella_phage	4.5e-79	60.5
AXV23860.1\|1246817_1246961_+	hypothetical protein	NA	NA	NA	NA
AXV23861.1\|1246969_1247281_-	Mobile element protein	Q716C1	Shigella_phage	2.4e-11	40.8
AXV23862.1\|1247337_1247637_-	NgrB	NA	NA	NA	NA
AXV23863.1\|1247802_1247958_-	Prophage regulatory protein alpA	A0A1V0E8E5	Vibrio_phage	1.7e-05	53.2
AXV23864.1\|1248155_1249025_+	hypothetical protein	NA	NA	NA	NA
AXV23865.1\|1249027_1249399_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	1.6e-65	99.2
AXV23866.1\|1249590_1251114_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AXV23867.1\|1251705_1252185_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.6e-73	97.8
AXV23868.1\|1252184_1252460_-	Mobile element protein	Q6H9S4	Enterobacteria_phage	5.0e-45	97.8

DBSCAN-SWA_4

1769239 : 1778681

Enterobacteria_phage(85.71%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV24348.1\|1769239_1770166_+	Osmoprotectant ABC transporter ATP-binding subunit YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8
AXV24349.1\|1770170_1770902_+	Osmoprotectant ABC transporter inner membrane protein YehW	NA	NA	NA	NA
AXV24350.1\|1770882_1770990_-	membrane protein	NA	NA	NA	NA
AXV24351.1\|1771049_1771781_-	HTH-type transcriptional regulator mlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
AXV24352.1\|1772002_1773688_+\|lysis	Autolysis histidine kinase LytS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
AXV24353.1\|1773684_1774404_+	Two-component response-regulatory protein YehT	NA	NA	NA	NA
AXV24354.1\|1774450_1774921_+	hypothetical protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
AXV24355.1\|1774961_1775423_-	putative lipoprotein yehR	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
AXV24356.1\|1775547_1777548_-	YehQ protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.3
AXV24357.1\|1777544_1778681_-	Mg-chelatase subunit ChlD	Q9EYF7	Enterobacteria_phage	4.6e-161	97.1

DBSCAN-SWA_5

1988526 : 1999997

Enterobacteria_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV24551.1\|1988526_1989309_+	Putative two-component system response regulator YedW	W8CYM9	Bacillus_phage	1.3e-32	35.6
AXV24552.1\|1989308_1990667_+	Putative two component system histidine kinase YedV	Q8QKV7	Ectocarpus_siliculosus_virus	2.3e-05	20.5
AXV24553.1\|1990764_1991616_-	Chaperone protein hchA	NA	NA	NA	NA
AXV24554.1\|1991895_1992399_+	Mobile element protein	U5P0U6	Shigella_phage	8.2e-94	98.8
AXV24555.1\|1992413_1992557_-	hypothetical protein	NA	NA	NA	NA
AXV24556.1\|1992904_1993723_-	Mobile element protein	A0A0P0I4A4	Acinetobacter_phage	1.2e-65	45.2
AXV24557.1\|1993862_1995014_+	Mobile element protein	W5R8L2	Staphylococcus_phage	9.8e-42	35.3
AXV24558.1\|1995335_1996010_-	Outer membrane porin protein NmpC precursor	Q1MVN1	Enterobacteria_phage	2.2e-49	44.8
AXV24559.1\|1996003_1996396_-	Outer membrane porin protein NmpC precursor	Q1MVN1	Enterobacteria_phage	6.5e-22	49.5
AXV24560.1\|1997023_1997326_+	hypothetical protein	NA	NA	NA	NA
AXV24561.1\|1997365_1998061_+	metal-dependent phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	3.6e-07	26.9
AXV24562.1\|1998127_1999546_+	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.4e-101	55.6
AXV24563.1\|1999526_1999997_+	Very-short-patch mismatch repair endonuclease	E5E3X5	Burkholderia_phage	1.5e-33	47.6

DBSCAN-SWA_6

2039754 : 2074903

Enterobacteria_phage(86.36%)

portal,plate,tail,terminase,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV24613.1\|2039754_2039895_-	hypothetical protein	A0A0A7NPZ4	Enterobacteria_phage	7.0e-19	100.0
AXV24614.1\|2040086_2040347_-	hypothetical protein	NA	NA	NA	NA
AXV24615.1\|2040389_2041499_-	hypothetical protein	A0A0A7NQ97	Enterobacteria_phage	4.1e-202	98.1
AXV24616.1\|2041656_2042841_+\|tail	Phage tail sheath protein	A0A0A7NV69	Enterobacteria_phage	3.8e-222	98.0
AXV24617.1\|2042840_2043353_+\|tail	Phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.7e-92	98.8
AXV24618.1\|2043407_2043578_+	Tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.6e-17	92.2
AXV24619.1\|2043549_2043762_+	Tail protein	A0A0A7NPZ0	Enterobacteria_phage	1.2e-27	95.7
AXV24620.1\|2043770_2043926_+	hypothetical protein	A0A0A7NQ96	Enterobacteria_phage	3.3e-22	98.0
AXV24621.1\|2043912_2046720_+	Phage protein	A0A0A7NRZ9	Enterobacteria_phage	0.0e+00	92.5
AXV24622.1\|2046732_2047221_+\|tail	Phage-related tail protein	A0A0A7NV65	Enterobacteria_phage	8.8e-85	99.4
AXV24623.1\|2047473_2047950_+	Serine acetyltransferase	NA	NA	NA	NA
AXV24624.1\|2047993_2048572_-\|tail	Phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	7.7e-96	89.0
AXV24625.1\|2048571_2050704_-\|tail	Phage tail fiber protein	U5N099	Enterobacteria_phage	8.0e-130	66.0
AXV24626.1\|2050706_2051237_-\|tail	Phage tail fiber protein	A0A0A7NPV1	Enterobacteria_phage	2.1e-92	98.8
AXV24627.1\|2051229_2052126_-\|plate	Baseplate assembly protein J	A0A0A7NPY5	Enterobacteria_phage	5.7e-154	97.3
AXV24628.1\|2052129_2052480_-\|plate	Phage baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	9.2e-60	100.0
AXV24629.1\|2052476_2053058_-\|plate	Baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	4.3e-102	97.9
AXV24630.1\|2053054_2053690_-\|tail	Phage tail completion protein	A0A0A7NV60	Enterobacteria_phage	7.6e-113	99.1
AXV24631.1\|2053682_2054150_-\|tail	Phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.1e-83	96.1
AXV24632.1\|2054173_2056054_-	Mobile element protein	H6WZJ9	Escherichia_phage	3.8e-301	81.0
AXV24633.1\|2056050_2056221_-	hypothetical protein	NA	NA	NA	NA
AXV24634.1\|2056192_2056600_-	hypothetical protein	A0A0A7NPY2	Enterobacteria_phage	1.2e-63	95.6
AXV24635.1\|2056596_2056989_-	Capsid scaffolding protein	A0A0A7NQ86	Enterobacteria_phage	6.4e-70	97.7
AXV24636.1\|2056985_2057309_-	Glucose/maltose/N-acetylglucosamine-specific phosphotransferase system, IIC components	A0A0A7NRY9	Enterobacteria_phage	2.0e-48	95.3
AXV24637.1\|2057311_2057512_-	Tail component protein	A0A0A7NV57	Enterobacteria_phage	3.0e-31	98.5
AXV24638.1\|2057511_2058006_-\|head	Phage head completion-stabilization protein	A0A0A7NPU2	Enterobacteria_phage	1.2e-89	99.4
AXV24639.1\|2058107_2058908_-\|terminase	Phage terminase, endonuclease subunit	A0A0A7NPX9	Enterobacteria_phage	6.6e-130	91.4
AXV24640.1\|2058953_2060006_-\|capsid	Phage major capsid protein	A0A0A7NQ82	Enterobacteria_phage	3.2e-188	94.3
AXV24641.1\|2060029_2060866_-\|capsid	Scf032 family phage capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	7.9e-150	99.6
AXV24642.1\|2061020_2062772_+\|terminase	Phage terminase, ATPase subunit	A0A0A7NV54	Enterobacteria_phage	0.0e+00	98.3
AXV24643.1\|2062771_2063818_+\|portal	Presumed portal vertex protein	A0A0A7NPT9	Enterobacteria_phage	2.2e-202	99.7
AXV24644.1\|2063832_2064357_-	hypothetical protein	NA	NA	NA	NA
AXV24645.1\|2064500_2064629_-	hypothetical protein	A0A0A7NPX6	Enterobacteria_phage	1.2e-09	81.0
AXV24646.1\|2064943_2065207_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.8e-31	72.4
AXV24647.1\|2065208_2065679_-	Phage EaA protein	Q8HAA7	Salmonella_phage	3.2e-15	40.0
AXV24648.1\|2065698_2066013_-	hypothetical protein	A0A0A7NPT5	Enterobacteria_phage	3.5e-18	51.9
AXV24649.1\|2066017_2066977_-	Putative stability/partitioning prophage protein	A0A0A7NPX4	Enterobacteria_phage	3.5e-178	98.7
AXV24650.1\|2067053_2069876_-	Phage replication protein	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	96.7
AXV24651.1\|2069882_2070248_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	2.1e-59	95.9
AXV24652.1\|2070264_2070393_-	hypothetical protein	NA	NA	NA	NA
AXV24653.1\|2070389_2070635_-	hypothetical protein	A0A0A7NV47	Enterobacteria_phage	3.4e-37	91.4
AXV24654.1\|2070631_2070835_-	hypothetical protein	A0A0A7NPS8	Enterobacteria_phage	2.3e-26	86.6
AXV24655.1\|2070921_2071035_-	hypothetical protein	A0A0A7NPW7	Enterobacteria_phage	1.2e-08	91.9
AXV24656.1\|2071031_2071274_-	hypothetical protein	A0A0A7NQ71	Enterobacteria_phage	4.4e-37	98.8
AXV24657.1\|2071285_2071564_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	3.6e-35	81.5
AXV24658.1\|2071574_2071925_-	hypothetical protein	A0A0A7NV42	Enterobacteria_phage	8.6e-50	81.9
AXV24659.1\|2071946_2072150_-	putative DNA-binding protein	P79674	Haemophilus_phage	3.1e-07	45.2
AXV24660.1\|2072592_2072853_+	XRE family transcriptional regulator	A4JWN8	Burkholderia_virus	6.1e-08	47.4
AXV24661.1\|2072868_2073519_+	putative membrane protein	NA	NA	NA	NA
AXV24662.1\|2073548_2073896_+	hypothetical protein	NA	NA	NA	NA
AXV24663.1\|2073901_2074903_+	Integrase	Q94N03	Haemophilus_virus	4.2e-105	58.5

DBSCAN-SWA_7

2112967 : 2204224

116

Enterobacteria_phage(46.38%)

portal,tail,terminase,protease,capsid,tRNA,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV24705.1\|2112967_2113939_-\|tRNA	tRNA (5-methoxyuridine) 34 synthase	NA	NA	NA	NA
AXV24706.1\|2113935_2114679_-\|tRNA	tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase	F5B419	Synechococcus_phage	4.6e-24	30.0
AXV24707.1\|2114719_2115115_-	inner membrane protein	NA	NA	NA	NA
AXV24708.1\|2115167_2115893_-	hypothetical protein	Q859D1	Escherichia_coli_phage	5.7e-72	99.2
AXV24709.1\|2115919_2117230_-	Integrase	Q8W658	Enterobacteria_phage	3.0e-244	95.4
AXV24710.1\|2117530_2117677_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.6e-21	93.8
AXV24711.1\|2117554_2117704_+	hypothetical protein	NA	NA	NA	NA
AXV24712.1\|2117680_2117824_-	hypothetical protein	Q6H9Z8	Enterobacteria_phage	2.6e-13	80.9
AXV24713.1\|2118007_2118766_-	Phage EaA protein	A0A1U9AJ59	Stx1_converting_phage	2.7e-109	82.0
AXV24714.1\|2118762_2119278_-	hypothetical protein	G9L6B3	Escherichia_phage	2.3e-99	97.7
AXV24715.1\|2119279_2119828_-	hypothetical protein	A0A1I9LJM5	Stx_converting_phage	1.4e-59	97.5
AXV24716.1\|2119824_2120064_-	hypothetical protein	S5MQM0	Escherichia_phage	9.1e-35	96.2
AXV24717.1\|2120056_2120260_-	hypothetical protein	K7PLX1	Enterobacteria_phage	1.0e-31	98.5
AXV24718.1\|2120256_2120598_-	Eae protein	K7PH61	Enterobacteria_phage	5.6e-62	97.3
AXV24719.1\|2120609_2121146_-	yfdR	A0A0P0ZCH9	Stx2-converting_phage	2.2e-100	99.4
AXV24720.1\|2121273_2122098_-	hypothetical protein	K7PJQ6	Enterobacteria_phage	1.1e-148	98.9
AXV24721.1\|2122163_2122526_-	hypothetical protein	Q8SBF8	Shigella_phage	7.5e-57	94.2
AXV24722.1\|2123228_2123876_-	regulatory protein	K7PKK1	Enterobacteria_phage	2.3e-117	99.5
AXV24723.1\|2124018_2124279_+	Phage DNA-binding protein	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
AXV24724.1\|2124271_2124829_+	hypothetical protein	Q8SBF4	Shigella_phage	5.3e-94	94.1
AXV24725.1\|2124825_2125971_+	putative antirepressor	A5LH69	Enterobacteria_phage	3.1e-173	83.5
AXV24726.1\|2125967_2126192_+	hypothetical protein	A5LH70	Enterobacteria_phage	2.4e-37	95.9
AXV24727.1\|2126194_2127007_+	Primosomal protein I	A5LH71	Enterobacteria_phage	2.3e-122	88.0
AXV24728.1\|2127009_2127498_+	hypothetical protein	A0A291AWV6	Escherichia_phage	1.5e-84	96.3
AXV24729.1\|2127370_2127505_+	hypothetical protein	NA	NA	NA	NA
AXV24730.1\|2127497_2128151_+	DNA adenine methylase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
AXV24731.1\|2128147_2128474_+\|protease	SOS-response repressor and protease LexA	A0A291AWY9	Escherichia_phage	2.7e-53	98.1
AXV24732.1\|2128662_2128866_+	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA	A0A291AX14	Escherichia_phage	1.8e-28	95.1
AXV24733.1\|2129028_2129844_+	Phage-related protein	U5P4K5	Shigella_phage	8.5e-149	99.3
AXV24734.1\|2129923_2130841_+	Putative cytoplasmic protein	A0A291AWV9	Escherichia_phage	1.2e-180	99.3
AXV24735.1\|2130858_2131215_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.3e-58	92.0
AXV24736.1\|2131194_2132409_-	hypothetical protein	NA	NA	NA	NA
AXV24737.1\|2132411_2133104_-	37 kDa nucleoid-associated protein	NA	NA	NA	NA
AXV24738.1\|2133607_2133757_+	hypothetical protein	NA	NA	NA	NA
AXV24739.1\|2133852_2134050_+	hypothetical protein	S5MQK8	Escherichia_phage	2.6e-27	96.9
AXV24740.1\|2134310_2134898_+	Putative transcriptional regulator	NA	NA	NA	NA
AXV24741.1\|2135664_2137626_+	Mobile element protein	A0A0P0ZBH7	Stx2-converting_phage	3.9e-240	64.2
AXV24742.1\|2137842_2137956_+	Phage protein	A0A2R2Z345	Escherichia_phage	1.7e-07	90.6
AXV24743.1\|2137981_2138251_+	hypothetical protein	A0A2R2Z348	Escherichia_phage	8.2e-08	74.2
AXV24744.1\|2138326_2138542_+	hypothetical protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
AXV24745.1\|2138546_2138891_+	hypothetical protein	A0A0P0ZD64	Stx2-converting_phage	7.2e-57	97.4
AXV24746.1\|2138941_2139475_+	Phage lysin, 1,4-beta-N-acetylmuramidase/lysozyme	Q6H9V6	Enterobacteria_phage	4.8e-100	95.5
AXV24747.1\|2139634_2139772_+	hypothetical protein	Q687G2	Enterobacteria_phage	1.3e-17	97.8
AXV24748.1\|2139773_2140241_+	Phage endopeptidase	Q9ZXB6	Enterobacteria_phage	3.4e-78	99.4
AXV24749.1\|2140382_2140505_+	hypothetical protein	NA	NA	NA	NA
AXV24750.1\|2140591_2140732_+	hypothetical protein	NA	NA	NA	NA
AXV24751.1\|2140982_2141063_-	hypothetical protein	NA	NA	NA	NA
AXV24752.1\|2141065_2141179_-	hypothetical protein	A0A0K2FJC5	Escherichia_phage	3.6e-10	83.8
AXV24753.1\|2141204_2141363_+	hypothetical protein	NA	NA	NA	NA
AXV24754.1\|2141576_2141993_+	Terminase small subunit	A0A0U2S671	Escherichia_phage	3.9e-41	93.6
AXV24755.1\|2142144_2143893_+\|terminase	Phage terminase, large subunit	A0A0K2FJ14	Enterobacteria_phage	4.8e-242	67.0
AXV24756.1\|2143876_2144083_+\|head,tail	Phage head-to-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AXV24757.1\|2144079_2145672_+\|portal	Phage portal protein	K7P6U7	Enterobacteria_phage	4.2e-184	60.5
AXV24758.1\|2145661_2147167_+\|capsid	Phage capsid and scaffold	A0A2I6TC87	Escherichia_phage	1.2e-100	54.0
AXV24759.1\|2147203_2147551_+	Head decoration protein	C6ZCY1	Enterobacteria_phage	4.4e-22	57.0
AXV24760.1\|2147608_2148637_+\|capsid	Phage major capsid protein	C6ZCY2	Enterobacteria_phage	1.1e-113	61.0
AXV24761.1\|2148689_2149058_+	Phage DNA-packaging protein	NA	NA	NA	NA
AXV24762.1\|2149050_2149404_+\|capsid	Phage capsid protein	A0A0K2FJB7	Enterobacteria_phage	1.9e-41	70.1
AXV24763.1\|2149419_2149998_+\|tail	Minor tail protein Z	A0A2R9YJK4	Escherichia_phage	4.9e-74	90.6
AXV24764.1\|2149994_2150390_+\|tail	Phage minor tail protein	A0A0K2FIF4	Enterobacteria_phage	2.2e-70	99.2
AXV24765.1\|2150397_2151138_+\|tail	Phage tail assembly protein	A0A0K2FJ05	Enterobacteria_phage	5.0e-132	99.2
AXV24766.1\|2151153_2151576_+\|tail	Phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	6.7e-73	100.0
AXV24767.1\|2151557_2151992_+\|tail	Phage minor tail protein	A0A0K2FJB3	Enterobacteria_phage	1.7e-63	98.3
AXV24768.1\|2151984_2154546_+\|tail	Phage tail length tape-measure protein 1	A0A0K2FI43	Enterobacteria_phage	0.0e+00	99.6
AXV24769.1\|2154542_2154872_+\|tail	Phage minor tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
AXV24770.1\|2154871_2155570_+\|tail	Phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	2.8e-132	98.7
AXV24771.1\|2155718_2156318_+\|tail	Phage tail assembly protein	C6ZCZ3	Enterobacteria_phage	3.8e-122	100.0
AXV24772.1\|2156314_2156887_+\|tail	Phage tail assembly protein I	A0A0K2FJB0	Escherichia_phage	6.7e-84	99.5
AXV24773.1\|2156947_2160427_+\|tail	Phage tail fiber protein	A0A291AWT4	Escherichia_phage	0.0e+00	90.0
AXV24774.1\|2160494_2161094_+	Attachment invasion locus protein precursor	Q9EV15	Enterobacteria_phage	1.0e-106	95.5
AXV24775.1\|2161742_2162540_-\|tail	Phage tail fiber protein	NA	NA	NA	NA
AXV24776.1\|2162515_2162650_+\|tail	Phage tail fiber protein	NA	NA	NA	NA
AXV24777.1\|2162610_2164416_+\|tail	Phage tail fiber protein	X2KTY7	Enterobacteria_phage	7.3e-84	59.1
AXV24778.1\|2164415_2165000_+\|tail	Phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	4.3e-102	94.3
AXV24779.1\|2164972_2165119_+	hypothetical protein	NA	NA	NA	NA
AXV24780.1\|2165115_2165364_-	DNA-damage-inducible protein I	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
AXV24781.1\|2165460_2165637_+	hypothetical protein	NA	NA	NA	NA
AXV24782.1\|2165718_2166285_-	Nicotinamidase/isochorismatase family protein	NA	NA	NA	NA
AXV24783.1\|2166645_2168367_+\|tRNA	Aspartyl-tRNA synthetase	NA	NA	NA	NA
AXV24784.1\|2168434_2168812_+	Dihydroneopterin triphosphate pyrophosphohydrolase type 2	NA	NA	NA	NA
AXV24785.1\|2168840_2169581_+	YebC	NA	NA	NA	NA
AXV24786.1\|2169615_2170137_+	Crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	2.0e-10	35.1
AXV24787.1\|2170138_2170741_-	hypothetical protein	NA	NA	NA	NA
AXV24788.1\|2171015_2171627_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
AXV24789.1\|2171635_2172646_+	Holliday junction DNA helicase RuvB	A0A127AWE7	Bacillus_phage	5.6e-09	25.5
AXV24790.1\|2172792_2173578_-	Zinc ABC transporter, inner membrane permease protein ZnuB	NA	NA	NA	NA
AXV24791.1\|2173574_2174330_-	Zinc ABC transporter, ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.3
AXV24792.1\|2174393_2175341_+	Zinc ABC transporter, periplasmic-binding protein ZnuA	NA	NA	NA	NA
AXV24793.1\|2175356_2176679_+	Cell wall endopeptidase, family M23/M37	A8ATH6	Listeria_phage	1.2e-14	40.9
AXV24794.1\|2176798_2177770_+	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA
AXV24795.1\|2177900_2179343_-	Pyruvate kinase	NA	NA	NA	NA
AXV24796.1\|2179470_2180340_-	Phosphogluconate repressor HexR, RpiR family	NA	NA	NA	NA
AXV24797.1\|2180362_2180512_+	hypothetical protein	NA	NA	NA	NA
AXV24798.1\|2180677_2182153_+	Glucose-6-phosphate 1-dehydrogenase	H6WFS4	Cyanophage	9.9e-79	37.3
AXV24799.1\|2182387_2184199_+	Phosphogluconate dehydratase	NA	NA	NA	NA
AXV24800.1\|2184235_2184877_+	4-hydroxy-2-oxoglutarate aldolase	NA	NA	NA	NA
AXV24801.1\|2184932_2186111_-	Phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA
AXV24802.1\|2186244_2186535_+	DNA damage-inducible protein	NA	NA	NA	NA
AXV24803.1\|2186589_2186958_+	putative membrane protein	NA	NA	NA	NA
AXV24804.1\|2187284_2187944_+	inner membrane protein YebE	NA	NA	NA	NA
AXV24805.1\|2188152_2190213_+	Protease II	NA	NA	NA	NA
AXV24806.1\|2190209_2190872_-	Exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	2.0e-07	41.6
AXV24807.1\|2190895_2191552_-	Putative amidohydrolase	NA	NA	NA	NA
AXV24808.1\|2191653_2191884_-	DNA polymerase III theta subunit	H9C187	Pectobacterium_phage	1.3e-14	61.8
AXV24809.1\|2192022_2192397_+	Copper resistance protein CopC	NA	NA	NA	NA
AXV24810.1\|2192400_2193273_+	Copper resistance protein D	NA	NA	NA	NA
AXV24811.1\|2193285_2193627_+	putative membrane protein YebY	NA	NA	NA	NA
AXV24812.1\|2194022_2194679_+	Ren protein	A0A222YWF0	Escherichia_phage	3.6e-57	50.7
AXV24813.1\|2194679_2194871_-	hypothetical protein	NA	NA	NA	NA
AXV24814.1\|2194975_2195212_-	hypothetical protein	NA	NA	NA	NA
AXV24815.1\|2195329_2196769_-	Ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA
AXV24816.1\|2196848_2199488_-	Paraquat-inducible protein B	NA	NA	NA	NA
AXV24817.1\|2199450_2200689_-	Paraquat-inducible protein A	NA	NA	NA	NA
AXV24818.1\|2200863_2201361_+	GAF domain-containing free methionine-(R)-sulfoxide reductase	NA	NA	NA	NA
AXV24819.1\|2201457_2202156_+	Osmotic activation protein ProQ	NA	NA	NA	NA
AXV24820.1\|2202181_2204224_+\|protease	Tail-specific protease precursor	A0A0R6PIZ1	Moraxella_phage	8.8e-86	33.5

DBSCAN-SWA_8

2449488 : 2538672

116

Escherichia_phage(37.65%)

portal,lysis,tail,integrase,terminase,protease,capsid,holin,head

attL 2465523:2465540|attR 2493757:2493774

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV25078.1\|2449488_2451243_+	Replicative helicase RepA	Q7M2A8	Enterobacteria_phage	3.2e-92	40.0
AXV25079.1\|2451531_2451810_+	hypothetical protein	NA	NA	NA	NA
AXV25080.1\|2451806_2452217_+	hypothetical protein	NA	NA	NA	NA
AXV25081.1\|2452229_2452502_+	PerC family transcriptional regulator	NA	NA	NA	NA
AXV25082.1\|2452440_2452608_+	hypothetical protein	NA	NA	NA	NA
AXV25083.1\|2452789_2453947_+\|capsid	Phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	1.3e-137	64.9
AXV25084.1\|2453986_2454559_+\|head,protease	Phage head maturation protease	A0A2H4JB68	uncultured_Caudovirales_phage	3.6e-61	63.0
AXV25085.1\|2454560_2455772_+\|portal	Phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.9e-189	79.5
AXV25086.1\|2455888_2456107_+\|head,tail	Phage head-tail adapter	A0A2H4JHK5	uncultured_Caudovirales_phage	4.9e-19	56.3
AXV25087.1\|2456103_2456400_+	hypothetical protein	A0A2H4JD08	uncultured_Caudovirales_phage	6.9e-32	64.3
AXV25088.1\|2456627_2456840_+	Phage endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	4.9e-24	72.5
AXV25089.1\|2456832_2457006_+	hypothetical protein	NA	NA	NA	NA
AXV25090.1\|2457128_2457485_+	hypothetical protein	A0A2H4JHS3	uncultured_Caudovirales_phage	9.4e-52	81.4
AXV25091.1\|2457651_2459130_+\|terminase	Phage terminase, large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	2.9e-248	82.9
AXV25092.1\|2459143_2459425_+	hypothetical protein	NA	NA	NA	NA
AXV25093.1\|2459642_2459825_+	hypothetical protein	NA	NA	NA	NA
AXV25094.1\|2459992_2460118_+	hypothetical protein	NA	NA	NA	NA
AXV25095.1\|2460123_2460288_-	Putative transport protein	NA	NA	NA	NA
AXV25096.1\|2460699_2461065_+	Spermidine export protein MdtJ	NA	NA	NA	NA
AXV25097.1\|2461051_2461381_+	Spermidine export protein MdtI	NA	NA	NA	NA
AXV25098.1\|2461419_2462241_-	hypothetical protein	NA	NA	NA	NA
AXV25099.1\|2462340_2462424_-	hypothetical protein	NA	NA	NA	NA
AXV25100.1\|2462516_2462852_-	Acid shock protein precursor	NA	NA	NA	NA
AXV25101.1\|2463248_2464502_-	major facilitator superfamily permease	NA	NA	NA	NA
AXV25102.1\|2464608_2465502_+	LysR family transcriptional regulator YnfL	NA	NA	NA	NA
2465523:2465540	attL	NA	NA	NA	NA
AXV25103.1\|2465636_2466857_+	MalT and manXYZ operon transcriptional repressor Mlc	NA	NA	NA	NA
AXV25104.1\|2466981_2467677_+	Dethiobiotin synthetase	NA	NA	NA	NA
AXV25105.1\|2467692_2468886_-	hypothetical protein	NA	NA	NA	NA
AXV25106.1\|2469080_2469695_-	Putative anaerobic dehydrogenase oxidoreductase component	A0A077SLS7	Escherichia_phage	8.7e-29	36.3
AXV25107.1\|2469737_2470592_-	Anaerobic dimethyl sulfoxide reductase chain C	NA	NA	NA	NA
AXV25108.1\|2470593_2471148_-	Anaerobic dimethyl sulfoxide reductase chain B	A0A077SL61	Escherichia_phage	1.4e-62	57.7
AXV25109.1\|2471185_2472349_-\|integrase	Phage integrase	A0A088CD23	Shigella_phage	3.8e-227	99.7
AXV25110.1\|2472610_2472862_-	putative bacteriophage protein	G9L6F5	Escherichia_phage	3.9e-36	91.6
AXV25111.1\|2472913_2473591_-	Phage exonuclease	B6DZ61	Enterobacteria_phage	3.0e-131	99.1
AXV25112.1\|2473587_2474373_-	Recombinational DNA repair protein RecT	A0A088CBI3	Shigella_phage	9.4e-145	97.3
AXV25113.1\|2474378_2474675_-	hypothetical protein	V5URU8	Shigella_phage	5.8e-47	93.9
AXV25114.1\|2474671_2476744_-	Exodeoxyribonuclease VIII	V5UQJ3	Shigella_phage	0.0e+00	87.2
AXV25115.1\|2476851_2477238_-	hypothetical protein	V5USC5	Shigella_phage	9.5e-50	78.9
AXV25116.1\|2477321_2477543_-	Kil protein	A0A0U2RTC4	Escherichia_phage	1.1e-34	94.4
AXV25117.1\|2477999_2478209_+	hypothetical protein	NA	NA	NA	NA
AXV25118.1\|2478177_2478537_-	hypothetical protein	A0A088CBI5	Shigella_phage	2.7e-38	73.5
AXV25119.1\|2478568_2478754_-	hypothetical protein	V5URU3	Shigella_phage	1.9e-16	97.8
AXV25120.1\|2478964_2479270_-	Phage antitermination protein N	C6ZCW1	Enterobacteria_phage	1.4e-35	83.5
AXV25121.1\|2479603_2479825_+	hypothetical protein	NA	NA	NA	NA
AXV25122.1\|2479978_2480653_-	helix-turn-helix family protein	A0A0N7C1P9	Escherichia_phage	6.2e-121	99.6
AXV25123.1\|2480796_2481021_+	Phage regulatory protein Cro	A0A0N7C1T6	Escherichia_phage	1.2e-36	100.0
AXV25124.1\|2481137_2481434_+	hypothetical protein	A0A088CBI6	Shigella_phage	1.2e-47	99.0
AXV25125.1\|2481448_2481667_+	hypothetical protein	A0A088CC17	Shigella_phage	1.1e-21	100.0
AXV25126.1\|2481768_2482770_+	Primosomal protein I	A0A088CD36	Shigella_phage	6.5e-183	96.4
AXV25127.1\|2482776_2483517_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	2.3e-121	87.4
AXV25128.1\|2483542_2484313_+	hypothetical protein	A0A088CE47	Shigella_phage	8.1e-109	82.4
AXV25129.1\|2484499_2484724_+	LygF	A0A0U2QQN3	Escherichia_phage	2.5e-18	60.8
AXV25130.1\|2484780_2485365_+	hypothetical protein	A0A0P0ZD75	Stx2-converting_phage	5.5e-33	83.5
AXV25131.1\|2485435_2485585_+	hypothetical protein	NA	NA	NA	NA
AXV25132.1\|2485773_2485986_+	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	8.4e-16	62.9
AXV25133.1\|2486195_2486375_+	Phage protein	NA	NA	NA	NA
AXV25134.1\|2486393_2486879_+	hypothetical protein	NA	NA	NA	NA
AXV25135.1\|2486929_2487247_-	transcriptional regulator	NA	NA	NA	NA
AXV25136.1\|2487355_2487610_-	hypothetical protein	NA	NA	NA	NA
AXV25137.1\|2487641_2487797_+	hypothetical protein	NA	NA	NA	NA
AXV25138.1\|2487952_2488618_+	Phage antirepressor protein	A0A088CD42	Shigella_phage	1.9e-90	79.2
AXV25139.1\|2488672_2489083_+	Phage NinB DNA recombination	A0A088CBP6	Shigella_phage	3.9e-70	98.5
AXV25140.1\|2489536_2490220_+	Phage antirepressor protein	Q8HA19	Enterobacteria_phage	2.3e-107	85.7
AXV25141.1\|2490294_2491017_+	Phage DNA binding protein Roi	A0A0N7KZI6	Stx2-converting_phage	1.7e-124	97.5
AXV25142.1\|2491016_2491307_+	Phage protein	A0A088CE53	Shigella_phage	9.3e-50	96.9
AXV25143.1\|2491303_2491666_+	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA	A0A088CBJ1	Shigella_phage	9.2e-63	98.3
AXV25144.1\|2491665_2491860_+	protein ninH	A0A088CC23	Shigella_phage	1.4e-30	100.0
AXV25145.1\|2491905_2492022_-	hypothetical protein	NA	NA	NA	NA
AXV25146.1\|2492095_2492287_+	antitermination protein Q	Q777W5	Enterobacteria_phage	1.0e-28	98.4
AXV25147.1\|2493052_2494963_+	Phage protein	A0A0N7CGH9	Escherichia_phage	4.9e-280	74.8
2493757:2493774	attR	NA	NA	NA	NA
AXV25148.1\|2495102_2495285_+	Phage protein	S5MBZ5	Escherichia_phage	1.6e-23	91.7
AXV25149.1\|2495310_2495556_+	Phage protein	S5MW40	Escherichia_phage	9.1e-14	86.4
AXV25150.1\|2495632_2495848_+\|holin,lysis	Phage holin lysis protein S	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
AXV25151.1\|2495852_2496386_+	Phage lysin, 1,4-beta-N-acetylmuramidase	A0A088CC28	Shigella_phage	5.6e-93	91.5
AXV25152.1\|2496606_2496720_+	hypothetical protein	A0A2L1IV24	Escherichia_phage	6.6e-12	100.0
AXV25153.1\|2496721_2497180_+	Phage outer membrane lytic protein Rz	A0A2L1IV55	Escherichia_phage	6.4e-77	99.3
AXV25154.1\|2497260_2497416_-	hypothetical protein	A0A2L1IV13	Escherichia_phage	2.1e-24	98.0
AXV25155.1\|2497683_2497803_+	hypothetical protein	A0A2L1IV25	Escherichia_phage	3.0e-15	94.9
AXV25156.1\|2498444_2499260_+	DNA packaging	A0A2L1IV66	Escherichia_phage	6.6e-125	99.6
AXV25157.1\|2499285_2500947_+	Phage protein	A0A088CBQ3	Shigella_phage	0.0e+00	100.0
AXV25158.1\|2500946_2503091_+	Phage protein	A0A088CE71	Shigella_phage	0.0e+00	100.0
AXV25159.1\|2503248_2504256_+	hypothetical protein	A0A2L1IV47	Escherichia_phage	1.3e-167	92.8
AXV25160.1\|2504278_2505493_+	phage protein	A0A088CC32	Shigella_phage	4.7e-228	97.0
AXV25161.1\|2505547_2505937_+	hypothetical protein	V5UT93	Shigella_phage	1.9e-61	97.7
AXV25162.1\|2505987_2506449_+	hypothetical protein	A0A2L1IV43	Escherichia_phage	1.1e-68	96.7
AXV25163.1\|2506432_2506996_+	Phage protein	A0A2L1IV64	Escherichia_phage	8.3e-103	99.5
AXV25164.1\|2506995_2507646_+	hypothetical protein	A0A0P0ZG46	Escherichia_phage	1.2e-118	98.6
AXV25165.1\|2507642_2509658_+\|tail	Phage tail fiber protein	V5USF3	Shigella_phage	1.3e-78	63.8
AXV25166.1\|2510574_2510703_-	hypothetical protein	NA	NA	NA	NA
AXV25167.1\|2510866_2512492_+	hypothetical protein	A0A1I9LJT3	Stx_converting_phage	0.0e+00	97.0
AXV25168.1\|2512488_2513763_+\|tail	Phage tail fiber protein	A0A0N7C124	Escherichia_phage	5.3e-206	92.2
AXV25169.1\|2513777_2514056_+	putative outer membrane protein	A0A2L1IV69	Escherichia_phage	9.9e-49	98.9
AXV25170.1\|2514061_2514679_+	hypothetical protein	A0A2L1IV83	Escherichia_phage	5.7e-121	99.5
AXV25171.1\|2514805_2515543_+	Outer membrane protein Lom	A0A2L1IV31	Escherichia_phage	1.2e-136	100.0
AXV25172.1\|2515775_2515916_+	hypothetical protein	A0A2R2X2B4	Escherichia_phage	3.1e-19	100.0
AXV25173.1\|2515996_2516374_+	hypothetical protein	A0A088CC37	Shigella_phage	1.9e-66	99.2
AXV25174.1\|2516465_2517122_+	hypothetical protein	A0A0H4IPM7	Shigella_phage	9.7e-103	99.1
AXV25175.1\|2517124_2517571_+	hypothetical protein	V5UT82	Shigella_phage	9.9e-75	97.3
AXV25176.1\|2517580_2517832_+	Phage protein	A0A2R2Z351	Escherichia_phage	7.9e-13	100.0
AXV25177.1\|2517842_2519108_+	hypothetical protein	A0A2L1IV65	Escherichia_phage	8.2e-191	94.5
AXV25178.1\|2519176_2527531_+	Phage protein	Q08J70	Stx2-converting_phage	0.0e+00	95.6
AXV25179.1\|2527654_2527846_+	hypothetical protein	A0A088CD78	Shigella_phage	8.0e-26	95.2
AXV25180.1\|2527932_2528661_-	Phage EaA protein	A0A088CE95	Shigella_phage	6.1e-82	55.1
AXV25181.1\|2528657_2529173_-	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	1.2e-100	99.4
AXV25182.1\|2529174_2529660_-	hypothetical protein	A5VWB3	Enterobacteria_phage	1.1e-42	86.1
AXV25183.1\|2529656_2530343_-	hypothetical protein	A5VWB1	Enterobacteria_phage	1.8e-38	68.2
AXV25184.1\|2530329_2530596_-	hypothetical protein	A0A088CQ13	Enterobacteria_phage	1.4e-31	84.1
AXV25185.1\|2530597_2530915_-	hypothetical protein	A0A1I9LJV1	Stx_converting_phage	2.2e-44	96.7
AXV25186.1\|2530911_2531133_-	conjugal transfer protein TraR	A0A0N7C094	Escherichia_phage	1.3e-35	100.0
AXV25187.1\|2531031_2531154_+	hypothetical protein	NA	NA	NA	NA
AXV25188.1\|2531180_2531564_-	Phage antirepressor protein	A0A088CBR4	Shigella_phage	1.8e-45	77.3
AXV25189.1\|2532067_2532697_-	Phage antirepressor protein	A0A0P0ZCA2	Stx2-converting_phage	4.5e-97	86.6
AXV25190.1\|2532946_2533231_-	Phage antirepressor protein	G9L6G2	Escherichia_phage	4.0e-45	85.1
AXV25191.1\|2533637_2533751_-	Anaerobic dimethyl sulfoxide reductase chain B	A0A077SL61	Escherichia_phage	2.1e-05	72.0
AXV25192.1\|2533761_2536158_-	Anaerobic selenate reductase, molybdenum cofactor-containing periplasmic protein YnfE	A0A077SK27	Escherichia_phage	2.8e-208	48.6
AXV25193.1\|2536245_2538672_-	Anaerobic dimethyl sulfoxide reductase chain A	A0A077SK27	Escherichia_phage	2.3e-213	49.1

DBSCAN-SWA_9

2826547 : 2888016

Enterobacteria_phage(37.74%)

portal,tail,terminase,protease,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV25470.1\|2826547_2827597_-\|protease	putative protease sohB	A0A2H4UUF9	Bodo_saltans_virus	1.3e-21	31.5
AXV25471.1\|2827816_2828575_+	YciK-like oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	8.8e-07	23.4
AXV25472.1\|2828571_2829162_+	Cob(I)alamin adenosyltransferase	NA	NA	NA	NA
AXV25473.1\|2829201_2830074_-	Ribosomal large subunit pseudouridine synthase B	NA	NA	NA	NA
AXV25474.1\|2830174_2830831_-	putative YciO protein, TsaC/YrdC-like protein	NA	NA	NA	NA
AXV25475.1\|2830791_2831673_-	putative metal-dependent phosphoesterase	NA	NA	NA	NA
AXV25476.1\|2831946_2833509_+	Anthranilate synthase, aminase component	NA	NA	NA	NA
AXV25477.1\|2833508_2835104_+	Anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-52	38.5
AXV25478.1\|2835107_2836466_+	Indole-3-glycerol phosphate synthase / Phosphoribosylanthranilate isomerase	A0A0P0IR83	Acinetobacter_phage	8.6e-37	40.7
AXV25479.1\|2836477_2837671_+	Tryptophan synthase beta chain	NA	NA	NA	NA
AXV25480.1\|2837670_2838477_+	Tryptophan synthase alpha chain	NA	NA	NA	NA
AXV25481.1\|2838857_2839037_+	Conidiation-specific protein 10	NA	NA	NA	NA
AXV25482.1\|2839101_2839623_+	Protein yciF	NA	NA	NA	NA
AXV25483.1\|2839668_2840175_+	Protein YciE	NA	NA	NA	NA
AXV25484.1\|2840663_2840834_-\|tail	Phage tail fiber assembly protein	A0A0U2RK60	Escherichia_phage	9.4e-10	62.5
AXV25485.1\|2840948_2841218_-\|tail	Phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.7e-19	77.8
AXV25486.1\|2841286_2841943_+	hypothetical protein	NA	NA	NA	NA
AXV25487.1\|2841997_2842582_-\|tail	Phage tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.7e-103	95.4
AXV25488.1\|2842581_2844387_-\|tail	Phage tail fiber protein	X2KTY7	Enterobacteria_phage	3.6e-83	59.1
AXV25489.1\|2844347_2844482_-\|tail	Phage tail fiber protein	NA	NA	NA	NA
AXV25490.1\|2844517_2844919_+\|tail	Phage tail fiber protein	NA	NA	NA	NA
AXV25491.1\|2845567_2846167_-	Attachment invasion locus protein precursor	Q9EV15	Enterobacteria_phage	9.1e-108	97.0
AXV25492.1\|2846234_2849714_-\|tail	Phage tail fiber protein	A5LH43	Enterobacteria_phage	0.0e+00	89.6
AXV25493.1\|2849780_2849906_-	hypothetical protein	NA	NA	NA	NA
AXV25494.1\|2849959_2850091_+	hypothetical protein	NA	NA	NA	NA
AXV25495.1\|2850192_2850735_-\|tail	Phage tail assembly protein I	A0A291AWV5	Escherichia_phage	3.7e-76	83.5
AXV25496.1\|2850731_2851331_-\|tail	Phage tail assembly protein	K7PLW1	Enterobacteria_phage	5.3e-116	93.9
AXV25497.1\|2851479_2852178_-\|tail	Phage minor tail protein	A0A0K2FJ01	Enterobacteria_phage	3.4e-130	97.4
AXV25498.1\|2852177_2852507_-\|tail	Phage minor tail protein	A0A2R9YJM0	Escherichia_phage	2.3e-52	91.7
AXV25499.1\|2852503_2855077_-\|tail	Phage tail length tape-measure protein 1	A0A2R9YJM8	Escherichia_phage	0.0e+00	83.9
AXV25500.1\|2855057_2855447_-\|tail	Phage minor tail protein	S5MDP5	Escherichia_phage	1.1e-37	81.7
AXV25501.1\|2855497_2855929_-\|tail	Phage minor tail protein	A0A0K2FIQ8	Enterobacteria_phage	6.2e-42	68.8
AXV25502.1\|2855942_2856695_-\|tail	Phage minor tail protein	Q687F6	Enterobacteria_phage	6.7e-132	97.6
AXV25503.1\|2856702_2857098_-\|tail	Phage minor tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
AXV25504.1\|2857094_2857670_-\|tail	Minor tail protein Z	A0A2R9YJK4	Escherichia_phage	9.2e-49	57.3
AXV25505.1\|2857684_2858038_-\|capsid	Phage capsid and scaffold	A0A0K2FJB7	Enterobacteria_phage	3.0e-42	70.1
AXV25506.1\|2858030_2858399_-	Phage DNA-packaging protein	NA	NA	NA	NA
AXV25507.1\|2858450_2859479_-\|capsid	Phage major capsid protein	C6ZCY2	Enterobacteria_phage	2.8e-112	60.4
AXV25508.1\|2859536_2859884_-	Head decoration protein	A0A2R9YJN3	Escherichia_phage	8.9e-23	58.1
AXV25509.1\|2859920_2861426_-\|capsid	Phage capsid and scaffold	A0A2I6TC87	Escherichia_phage	3.0e-99	52.8
AXV25510.1\|2861415_2863008_-\|portal	Phage portal protein	K7P6U7	Enterobacteria_phage	3.8e-185	61.1
AXV25511.1\|2863004_2863211_-\|head,tail	Phage head-to-tail joining protein	K7PM10	Enterobacteria_phage	7.9e-11	56.9
AXV25512.1\|2863194_2864943_-\|terminase	Phage terminase, large subunit	A0A0K2FJ14	Enterobacteria_phage	2.3e-244	67.9
AXV25513.1\|2865094_2865511_-	Terminase small subunit	A0A0U2S671	Escherichia_phage	3.9e-41	93.6
AXV25514.1\|2865724_2865997_-	hypothetical protein	NA	NA	NA	NA
AXV25515.1\|2866043_2866328_-	hypothetical protein	NA	NA	NA	NA
AXV25516.1\|2866583_2866808_-	hypothetical protein	NA	NA	NA	NA
AXV25517.1\|2866901_2867189_-	hypothetical protein	A0A1P8DTP0	Salmonella_phage	4.0e-29	58.9
AXV25518.1\|2867267_2867411_-	Phage protein	K7PKL2	Enterobacteria_phage	2.4e-19	97.9
AXV25519.1\|2867407_2867920_-	Phage outer membrane lytic protein Rz	Q9AZ06	Salmonella_phage	5.8e-63	81.5
AXV25520.1\|2867876_2867978_-	hypothetical protein	NA	NA	NA	NA
AXV25521.1\|2867974_2868091_-	hypothetical protein	NA	NA	NA	NA
AXV25522.1\|2868093_2868225_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	7.5e-07	74.4
AXV25523.1\|2868227_2868440_-	hypothetical protein	A0A0M4S639	Salmonella_phage	2.7e-06	60.5
AXV25524.1\|2868517_2869051_-	Phage lysin, 1,4-beta-N-acetylmuramidase	Q6H9V6	Enterobacteria_phage	8.7e-102	97.2
AXV25525.1\|2869093_2869900_-	hypothetical protein	Q08JA0	Stx2-converting_phage	3.3e-145	94.8
AXV25526.1\|2869904_2870120_-	hypothetical protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
AXV25527.1\|2870270_2872124_-	Mobile element protein	Q08JA2	Stx2-converting_phage	0.0e+00	90.5
AXV25528.1\|2872109_2872259_+	hypothetical protein	NA	NA	NA	NA
AXV25529.1\|2872534_2872720_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	6.4e-20	73.7
AXV25530.1\|2873000_2873132_-	hypothetical protein	H6WZJ7	Escherichia_phage	1.1e-05	96.4
AXV25531.1\|2873167_2873446_-	hypothetical protein	NA	NA	NA	NA
AXV25532.1\|2873930_2874980_-	DNA methyl transferase, phage-associated	A0A0N7KZF8	Stx2-converting_phage	8.8e-199	95.7
AXV25533.1\|2875130_2875328_-	Phage protein	Q9MC00	Enterobacteria_phage	1.4e-28	96.9
AXV25534.1\|2875554_2876376_-	Phage antitermination protein Q	K7P7B9	Enterobacteria_phage	8.5e-80	60.1
AXV25535.1\|2876372_2876747_-	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA	V5URS4	Shigella_phage	5.8e-36	63.6
AXV25536.1\|2876759_2877806_-	Phage antitermination protein Q	U5P0K4	Shigella_phage	5.9e-110	55.0
AXV25537.1\|2878026_2878206_+	Mobile element protein	NA	NA	NA	NA
AXV25538.1\|2878247_2878403_-	Hok/Gef family protein	A0A0U2QV81	Escherichia_phage	1.9e-17	94.1
AXV25539.1\|2878640_2879207_-	Diacylglucosamine hydrolase like protein	NA	NA	NA	NA
AXV25540.1\|2879480_2879906_-	LygF	A0A0U2QQN3	Escherichia_phage	1.3e-63	94.0
AXV25541.1\|2879939_2880833_-	Primosomal protein I	U5P0A0	Shigella_phage	8.1e-60	50.2
AXV25542.1\|2880930_2881329_-	hypothetical protein	NA	NA	NA	NA
AXV25543.1\|2881352_2881607_-	Regulatory protein Cro	A0A2I6PIE5	Escherichia_phage	2.8e-18	60.3
AXV25544.1\|2881686_2882106_+	putative regulator	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
AXV25545.1\|2882321_2882555_+	Mobile element protein	M4QQ57	Salicola_phage	9.2e-08	55.3
AXV25546.1\|2882566_2882905_+	hypothetical protein	A0A2R2Z306	Escherichia_phage	2.5e-06	51.0
AXV25547.1\|2882893_2883028_-	hypothetical protein	NA	NA	NA	NA
AXV25548.1\|2883455_2883626_-	hypothetical protein	NA	NA	NA	NA
AXV25549.1\|2883654_2883843_+	Division inhibition protein dicB	NA	NA	NA	NA
AXV25550.1\|2883839_2884031_+	hypothetical protein	NA	NA	NA	NA
AXV25551.1\|2884123_2886595_+	Exodeoxyribonuclease	K7PLW7	Enterobacteria_phage	1.8e-56	59.2
AXV25552.1\|2886659_2886908_+	excisionase	NA	NA	NA	NA
AXV25553.1\|2886885_2888016_+	Mobile element protein	O21940	Phage_21	4.4e-103	51.4

DBSCAN-SWA_10

3134332 : 3137642

Stx2-converting_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV25832.1\|3134332_3135001_+	Mobile element protein	A0A2L1IVA1	Escherichia_phage	1.1e-112	97.1
AXV25833.1\|3135075_3135225_+	Mobile element protein	A0A2L1IVB6	Escherichia_phage	1.2e-13	100.0
AXV25834.1\|3135214_3135358_-	Mobile element protein	A0A0P0ZBS5	Stx2-converting_phage	9.9e-13	63.6
AXV25835.1\|3135345_3136830_-	Mobile element protein	A0A0P0ZEB3	Stx2-converting_phage	9.1e-141	59.9
AXV25836.1\|3136860_3137157_-	Mobile element protein	A0A0P0ZBY2	Stx2-converting_phage	2.2e-30	60.2
AXV25837.1\|3137207_3137642_-	Mobile element protein	Q6H9S5	Enterobacteria_phage	1.5e-19	60.3

DBSCAN-SWA_11

3172437 : 3179701

Stx2-converting_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV25888.1\|3172437_3174447_+	ferrienterochelin/colicins receptor	A0A0P0I887	Acinetobacter_phage	2.5e-08	31.5
AXV25889.1\|3174707_3174905_+	hypothetical protein	NA	NA	NA	NA
AXV25890.1\|3175142_3175547_+	Mobile element protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
AXV25891.1\|3175543_3175891_+	Mobile element protein	A0A0P0ZDM8	Stx2-converting_phage	7.5e-62	99.1
AXV25892.1\|3175939_3176134_+	hypothetical protein	A0A0P0ZEB3	Stx2-converting_phage	2.9e-07	96.8
AXV25893.1\|3176135_3177068_+	Mobile element protein	A0A0P0ZEB3	Stx2-converting_phage	2.4e-179	99.0
AXV25894.1\|3177134_3177323_+	hypothetical protein	NA	NA	NA	NA
AXV25895.1\|3177340_3179701_-	putative helicase	Q84473	Paramecium_bursaria_Chlorella_virus	1.5e-33	32.0

DBSCAN-SWA_12

3247058 : 3293032

Escherichia_phage(63.46%)

portal,tail,terminase,protease,holin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV25960.1\|3247058_3247646_-\|protease	Hydrogenase maturation protease	NA	NA	NA	NA
AXV25961.1\|3247642_3248350_-	Ni,Fe-hydrogenase I cytochrome b subunit	NA	NA	NA	NA
AXV25962.1\|3248368_3250162_-	Uptake hydrogenase large subunit	NA	NA	NA	NA
AXV25963.1\|3250158_3251277_-	Uptake hydrogenase small subunit precursor	NA	NA	NA	NA
AXV25964.1\|3252528_3254442_-\|tail	Phage tail fiber protein	S5MDN9	Escherichia_phage	6.8e-173	97.6
AXV25965.1\|3254592_3255216_-	Attachment invasion locus protein precursor	A0A1U8QHD6	Enterobacteria_phage	1.8e-66	59.9
AXV25966.1\|3255232_3258979_-\|tail	Phage tail fiber protein	S5MW25	Escherichia_phage	0.0e+00	81.0
AXV25967.1\|3259016_3259172_+	hypothetical protein	NA	NA	NA	NA
AXV25968.1\|3259225_3259744_-\|tail	Phage tail assembly protein I	Q9EYE5	Enterobacteria_phage	1.7e-78	89.5
AXV25969.1\|3259803_3260547_-\|tail	Phage tail assembly protein	S5MQI8	Escherichia_phage	4.3e-147	96.8
AXV25970.1\|3260557_3261256_-\|tail	Phage minor tail protein	S5M7Q4	Escherichia_phage	6.8e-131	97.4
AXV25971.1\|3261255_3261585_-\|tail	Phage minor tail protein	S5MW28	Escherichia_phage	1.2e-58	99.1
AXV25972.1\|3261581_3264230_-\|tail	Phage tail length tape-measure protein 1	Q687F3	Enterobacteria_phage	0.0e+00	92.9
AXV25973.1\|3264273_3264558_-\|tail	Phage minor tail protein	S5MDP5	Escherichia_phage	3.5e-49	98.9
AXV25974.1\|3264608_3265031_-\|tail	Phage minor tail protein	S5MQJ3	Escherichia_phage	5.1e-73	100.0
AXV25975.1\|3265046_3265406_-\|tail	Phage tail assembly	S5M7Q5	Escherichia_phage	1.0e-53	96.6
AXV25976.1\|3265402_3265648_-\|tail	Phage tail assembly	S5M7Q5	Escherichia_phage	8.7e-41	100.0
AXV25977.1\|3265644_3265794_-\|tail	Phage tail assembly	S5M7Q5	Escherichia_phage	1.6e-21	97.9
AXV25978.1\|3265801_3266200_-\|tail	Phage minor tail protein	S5MW30	Escherichia_phage	2.7e-71	100.0
AXV25979.1\|3266209_3266836_-\|tail	Minor tail protein Z	S5MBY4	Escherichia_phage	7.8e-102	100.0
AXV25980.1\|3266838_3267066_-	hypothetical protein	Q8VNN4	Enterobacteria_phage	1.1e-34	98.7
AXV25981.1\|3267112_3267484_-	hypothetical protein	S5MQJ5	Escherichia_phage	3.3e-47	97.2
AXV25982.1\|3267476_3267656_-\|protease	Prophage Clp protease-like protein	NA	NA	NA	NA
AXV25983.1\|3267630_3269481_-\|protease	Prophage Clp protease-like protein	S5M7Q8	Escherichia_phage	0.0e+00	99.7
AXV25984.1\|3269494_3270997_-\|portal	Phage portal protein	Q9EYD2	Enterobacteria_phage	4.8e-291	100.0
AXV25985.1\|3270996_3271209_-	hypothetical protein	S5MBY8	Escherichia_phage	3.0e-29	98.6
AXV25986.1\|3271205_3273329_-\|terminase	Phage terminase, large subunit	S5MDQ1	Escherichia_phage	0.0e+00	99.9
AXV25987.1\|3273325_3273802_-	hypothetical protein	Q9EYD0	Enterobacteria_phage	1.3e-80	96.8
AXV25988.1\|3274259_3274484_-	hypothetical protein	NA	NA	NA	NA
AXV25989.1\|3274507_3274975_-	Phage outer membrane lytic protein Rz	Q7AYI6	Enterobacteria_phage	3.3e-65	85.8
AXV25990.1\|3274971_3275505_-	Phage lysin, 1,4-beta-N-acetylmuramidase	S5MQK2	Escherichia_phage	1.1e-99	96.6
AXV25991.1\|3275541_3276099_-	Mobile element protein	Q08JA0	Stx2-converting_phage	3.1e-49	82.6
AXV25992.1\|3276102_3276318_-\|holin	Phage holin protein	G9L6J5	Escherichia_phage	9.0e-34	100.0
AXV25993.1\|3276395_3276641_-	Phage protein	A0A088CE63	Shigella_phage	2.5e-19	93.8
AXV25994.1\|3276681_3276861_-	Phage protein	A0A2R2Z345	Escherichia_phage	2.2e-25	100.0
AXV25995.1\|3276996_3278943_-	Mobile element protein	S5MDQ7	Escherichia_phage	0.0e+00	98.8
AXV25996.1\|3279075_3279162_-	hypothetical protein	NA	NA	NA	NA
AXV25997.1\|3279448_3279718_-	Shiga-like toxin II subunit B precursor	Q6DWN4	Enterobacteria_phage	1.2e-43	100.0
AXV25998.1\|3279729_3280689_-	Shiga-like toxin II subunit A precursor	A0A0P0ZDQ7	Stx2-converting_phage	3.6e-175	99.7
AXV25999.1\|3281071_3282130_-	phage-associated DNA methyl transferase	A0A0N7KZF8	Stx2-converting_phage	4.3e-193	92.6
AXV26000.1\|3282280_3282478_-	Phage protein	S5MQK8	Escherichia_phage	6.1e-29	100.0
AXV26001.1\|3282694_3283255_-	Phage antitermination protein Q	A0A0U2S606	Escherichia_phage	5.6e-67	69.1
AXV26002.1\|3283263_3283623_-	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA	V5URS4	Shigella_phage	8.0e-35	60.9
AXV26003.1\|3283635_3284685_-	Phage antitermination protein Q	U5P0K4	Shigella_phage	1.5e-110	54.6
AXV26004.1\|3284686_3285049_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.4e-10	50.8
AXV26005.1\|3285125_3285281_-	protein hokC	A0A1I9LJU7	Stx_converting_phage	3.8e-10	70.6
AXV26006.1\|3285491_3285575_-	hypothetical protein	NA	NA	NA	NA
AXV26007.1\|3285571_3286087_-	putative bacteriophage protein	A0A076GCN9	Escherichia_phage	1.2e-36	77.6
AXV26008.1\|3286083_3286260_-	hypothetical protein	A0A2R2X2A8	Escherichia_phage	1.1e-26	93.1
AXV26009.1\|3286252_3286369_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	3.3e-14	94.7
AXV26010.1\|3286527_3286884_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	5.7e-57	96.6
AXV26011.1\|3286861_3287188_-	Phage protein	Q8VNQ2	Enterobacteria_phage	2.0e-24	88.5
AXV26012.1\|3287188_3287500_-	Phage protein	A0A222YY67	Escherichia_phage	1.1e-48	83.5
AXV26013.1\|3287486_3287786_-	hypothetical protein	A0A0U2SAZ1	Escherichia_phage	1.2e-47	93.8
AXV26014.1\|3287788_3287962_-	hypothetical protein	A0A222YXX1	Escherichia_phage	2.6e-15	70.9
AXV26015.1\|3288102_3288819_-	hypothetical protein	A0A0U2SAW4	Escherichia_phage	5.7e-72	62.0
AXV26016.1\|3288852_3289314_-	putative phage replication protein	A0A0U2JGJ0	Escherichia_phage	4.0e-79	90.2
AXV26017.1\|3289306_3290338_-	Primosomal protein I	A0A0U2RT81	Escherichia_phage	8.1e-88	70.4
AXV26018.1\|3290406_3290805_-	Phage protein	NA	NA	NA	NA
AXV26019.1\|3290815_3291091_-	hypothetical protein	A0A0U2S629	Escherichia_phage	2.4e-15	51.2
AXV26020.1\|3291555_3291699_+\|tRNA	Cys-tRNA(Pro) deacylase YbaK	NA	NA	NA	NA
AXV26021.1\|3291716_3291908_+	hypothetical protein	NA	NA	NA	NA
AXV26022.1\|3292466_3292619_+	Mobile element protein	M4QQ57	Salicola_phage	6.6e-07	53.2
AXV26023.1\|3292630_3293032_+	hypothetical protein	I6PDF6	Cronobacter_phage	2.2e-09	84.2

DBSCAN-SWA_13

3311543 : 3410270

107

Shigella_phage(47.62%)

plate,tail,terminase,protease,capsid,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV26048.1\|3311543_3313304_+\|protease	ATP-dependent protease La Type II	NA	NA	NA	NA
AXV26049.1\|3313372_3313891_+	3-hydroxyacyl-[acyl-carrier-protein] dehydratase	NA	NA	NA	NA
AXV26050.1\|3313960_3314128_-	hypothetical protein	NA	NA	NA	NA
AXV26051.1\|3314383_3314947_-	Paraquat-inducible protein B	NA	NA	NA	NA
AXV26052.1\|3314943_3316584_-	Paraquat-inducible protein B	NA	NA	NA	NA
AXV26053.1\|3316588_3317842_-	Paraquat-inducible protein A	NA	NA	NA	NA
AXV26054.1\|3317971_3319879_-	ABC transporter ATPase component	A0A2K9L3Z8	Tupanvirus	1.4e-53	29.7
AXV26055.1\|3319889_3321998_-	23S rRNA (guanine-N-2-)-methyltransferase rlmL	NA	NA	NA	NA
AXV26056.1\|3322241_3323351_+	Flavodoxin reductase family 1	NA	NA	NA	NA
AXV26057.1\|3323347_3323890_-	hypothetical protein	NA	NA	NA	NA
AXV26058.1\|3324063_3325074_-	Dihydroorotate dehydrogenase	NA	NA	NA	NA
AXV26059.1\|3325184_3325874_-	putative fimbrial chaperone ycbF precursor	NA	NA	NA	NA
AXV26060.1\|3325887_3326400_-	type 1 fimbrae adaptor subunit FimF	NA	NA	NA	NA
AXV26061.1\|3326410_3326863_-	type 1 fimbrae adaptor subunit FimF	NA	NA	NA	NA
AXV26062.1\|3326964_3328035_-	Fimbriae-like adhesin SfmH	NA	NA	NA	NA
AXV26063.1\|3328025_3329918_-	type 1 fimbriae anchoring protein FimD	NA	NA	NA	NA
AXV26064.1\|3330326_3330857_-\|tRNA	Cys-tRNA(Pro) deacylase YbaK	A0A2D1GNR8	Pseudomonas_phage	1.1e-35	61.7
AXV26065.1\|3331296_3333387_+\|transposase	Phage transposase	A0A2D1GNK9	Pseudomonas_phage	3.0e-166	47.4
AXV26066.1\|3333458_3334391_+	Putative DNA transposition protein	A0A0C4UQR3	Shigella_phage	4.8e-71	49.0
AXV26067.1\|3334393_3334615_+	hypothetical protein	NA	NA	NA	NA
AXV26068.1\|3334627_3334882_+	hypothetical protein	NA	NA	NA	NA
AXV26069.1\|3334883_3335165_+	hypothetical protein	I6WB15	Burkholderia_virus	2.8e-11	47.4
AXV26070.1\|3335296_3335464_+	hypothetical protein	NA	NA	NA	NA
AXV26071.1\|3335438_3335732_+	hypothetical protein	NA	NA	NA	NA
AXV26072.1\|3335743_3336274_+	putative host-nuclease inhibitor protein	C9DGL8	Escherichia_phage	4.2e-48	56.6
AXV26073.1\|3337450_3337966_+	hypothetical protein	C9DGM0	Escherichia_phage	1.3e-46	54.2
AXV26074.1\|3337969_3338521_+	hypothetical protein	NA	NA	NA	NA
AXV26075.1\|3338517_3338703_+	hypothetical protein	NA	NA	NA	NA
AXV26076.1\|3338699_3339074_+	hypothetical protein	NA	NA	NA	NA
AXV26077.1\|3339066_3339264_+	hypothetical protein	A0A291AXE7	Shigella_phage	5.6e-06	36.2
AXV26078.1\|3339253_3339550_+	hypothetical protein	NA	NA	NA	NA
AXV26079.1\|3339546_3340056_+	hypothetical protein	A0A0C4UQU3	Shigella_phage	2.8e-25	46.8
AXV26080.1\|3340126_3340549_+	putative transcription regulator	NA	NA	NA	NA
AXV26081.1\|3340620_3341121_+	putative lysozyme	A0A2H4J3P8	uncultured_Caudovirales_phage	6.6e-27	42.0
AXV26082.1\|3341155_3341584_+	hypothetical protein	NA	NA	NA	NA
AXV26083.1\|3341558_3341786_+	hypothetical protein	NA	NA	NA	NA
AXV26084.1\|3341796_3342024_+	TraR family C4-type zinc finger protein	NA	NA	NA	NA
AXV26085.1\|3342004_3342316_+	hypothetical protein	NA	NA	NA	NA
AXV26086.1\|3342308_3342599_+	hypothetical protein	A0A0C4UR00	Shigella_phage	2.1e-25	63.2
AXV26087.1\|3342601_3343183_+	hypothetical protein	A0A0C4UQU5	Shigella_phage	3.2e-49	57.0
AXV26088.1\|3343193_3343442_+	hypothetical protein	NA	NA	NA	NA
AXV26089.1\|3343441_3345106_+\|terminase	Phage terminase, large subunit	A0A0C4UR29	Shigella_phage	2.4e-230	73.2
AXV26090.1\|3345105_3346695_+	Mu-like prophage FluMu protein	A0A0C4UQR8	Shigella_phage	8.5e-169	58.1
AXV26091.1\|3346678_3348010_+	Mu-like phage virion morphogenesis protein	A0A0C4UQY9	Shigella_phage	6.4e-154	58.5
AXV26092.1\|3348131_3348605_+	Putative virion morphogenesis protein	A0A0C4UR01	Shigella_phage	1.7e-37	53.9
AXV26093.1\|3348782_3349907_+	Mu-like prophage FluMu I protein	A0A0C4UQU6	Shigella_phage	5.0e-75	46.5
AXV26094.1\|3349906_3350854_+\|capsid	Phage major capsid protein	A0A0C4UQR9	Shigella_phage	2.7e-122	66.9
AXV26095.1\|3350897_3351257_+	hypothetical protein	NA	NA	NA	NA
AXV26096.1\|3351253_3351673_+	Mu-like prophage protein GP36	A0A0C4UR02	Shigella_phage	6.1e-34	54.3
AXV26097.1\|3351669_3352233_+	Mu-like prophage FluMu protein gp37	A0A0C4UQU7	Shigella_phage	4.8e-42	47.1
AXV26098.1\|3352236_3352515_+	Mu-like prophage FluMu protein GP38	NA	NA	NA	NA
AXV26099.1\|3352514_3354017_+\|tail	Bacteriophage tail sheath protein	A0A0C4UQS0	Shigella_phage	2.7e-132	51.1
AXV26100.1\|3354025_3354391_+\|tail	Phage tail tube protein	NA	NA	NA	NA
AXV26101.1\|3354405_3354882_+	Mu-like prophage FluMu protein gp41	A0A0C4UR03	Shigella_phage	1.0e-21	50.8
AXV26102.1\|3355008_3357084_+	Mu-like prophage FluMu protein gp42	A0A0C4UQU8	Shigella_phage	3.7e-71	37.7
AXV26103.1\|3357070_3358420_+\|tail	Phage tail/DNA circulation protein	C9DGQ2	Escherichia_phage	5.9e-54	33.1
AXV26104.1\|3358403_3359528_+\|tail	Prophage tail protein	C9DGQ3	Escherichia_phage	1.7e-94	47.7
AXV26105.1\|3359520_3360132_+\|plate	Prophage baseplate assembly protein V	A0A0C4UQZ3	Shigella_phage	2.5e-52	51.3
AXV26106.1\|3360124_3360562_+	Bacteriophage protein GP46	A0A0C4UR04	Shigella_phage	7.7e-40	56.9
AXV26107.1\|3360561_3361644_+	Phage FluMu protein gp47	A0A0C4UQU9	Shigella_phage	8.2e-99	53.2
AXV26108.1\|3361634_3362195_+\|tail	Prophage tail protein	C9DGQ7	Escherichia_phage	3.9e-44	49.1
AXV26109.1\|3362194_3363076_+\|tail	Prophage tail fiber protein	C9DGQ8	Escherichia_phage	3.6e-28	39.5
AXV26110.1\|3363107_3363629_-\|tail	Putative tail fiber assembly protein p37	A0A0U2QV64	Escherichia_phage	8.6e-46	49.1
AXV26111.1\|3363680_3364025_-\|tail	phage tail fiber protein	NA	NA	NA	NA
AXV26112.1\|3364119_3364692_+	Phage DNA invertase	A0A0F7LA37	Escherichia_phage	1.3e-74	76.9
AXV26113.1\|3364777_3366832_+	Mobile element protein	S5MDQ7	Escherichia_phage	1.3e-233	64.9
AXV26114.1\|3366973_3367159_+	hypothetical protein	A0A125RPW8	Escherichia_phage	1.0e-09	55.2
AXV26115.1\|3367194_3367449_+	hypothetical protein	NA	NA	NA	NA
AXV26116.1\|3367524_3367725_+	hypothetical protein	NA	NA	NA	NA
AXV26117.1\|3367687_3367894_-	hypothetical protein	NA	NA	NA	NA
AXV26118.1\|3368454_3369192_+	Protein Mom	A0A0C4UQZ7	Shigella_phage	3.7e-103	79.0
AXV26119.1\|3369298_3369829_-	type 1 fimbriae anchoring protein FimD	NA	NA	NA	NA
AXV26120.1\|3369898_3370573_-	chaperone FimC	NA	NA	NA	NA
AXV26121.1\|3370682_3371225_-	type 1 fimbriae major subunit FimA	NA	NA	NA	NA
AXV26122.1\|3371580_3372156_+	FMN reductase	NA	NA	NA	NA
AXV26123.1\|3372148_3373108_+	Alkanesulfonates-binding protein	NA	NA	NA	NA
AXV26124.1\|3373104_3374250_+	Alkanesulfonate monooxygenase	NA	NA	NA	NA
AXV26125.1\|3374260_3375052_+	Alkanesulfonates transport system permease protein	NA	NA	NA	NA
AXV26126.1\|3375048_3375816_+	Alkanesulfonates ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-29	37.6
AXV26127.1\|3376022_3378635_-	Membrane alanine aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	4.1e-19	22.6
AXV26128.1\|3378670_3378793_-	hypothetical protein	NA	NA	NA	NA
AXV26129.1\|3378900_3380103_+	Nicotinate phosphoribosyltransferase	NA	NA	NA	NA
AXV26130.1\|3380271_3381672_+\|tRNA	Asparaginyl-tRNA synthetase	A0A2K9V902	Bandra_megavirus	5.3e-82	36.1
AXV26131.1\|3381794_3381941_-	hypothetical protein	NA	NA	NA	NA
AXV26132.1\|3382273_3383362_+	Outer membrane protein F precursor	Q1MVN1	Enterobacteria_phage	1.8e-98	54.3
AXV26133.1\|3383377_3383548_-	hypothetical protein	NA	NA	NA	NA
AXV26134.1\|3383546_3384737_+	Aspartate aminotransferase	NA	NA	NA	NA
AXV26135.1\|3385015_3385996_+	Mobile element protein	NA	NA	NA	NA
AXV26136.1\|3386237_3386885_-	putative metal-binding enzyme YcbL-like protein	NA	NA	NA	NA
AXV26137.1\|3386911_3387460_-	exported protein	A0A0K1LKR7	Rhodobacter_phage	7.0e-06	33.7
AXV26138.1\|3387640_3389476_-	L,D-transpeptidase YcbB	NA	NA	NA	NA
AXV26139.1\|3389748_3394209_-	Chromosome partition protein MukB	NA	NA	NA	NA
AXV26140.1\|3394208_3394913_-	Chromosome partition protein MukE	NA	NA	NA	NA
AXV26141.1\|3394893_3396216_-	Chromosome partition protein MukF	NA	NA	NA	NA
AXV26142.1\|3396212_3396998_-	S-adenosylmethionine-dependent methyltransferase	NA	NA	NA	NA
AXV26143.1\|3397133_3397913_+	Membrane protein	NA	NA	NA	NA
AXV26144.1\|3397889_3398783_-	hypothetical protein	NA	NA	NA	NA
AXV26145.1\|3398936_3399683_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
AXV26146.1\|3399679_3399862_-	KDO2-Lipid A biosynthesis-related protein YcaR	NA	NA	NA	NA
AXV26147.1\|3399913_3401146_-	Putative cytoplasmic protein	NA	NA	NA	NA
AXV26148.1\|3401182_3402169_-	Tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
AXV26149.1\|3402165_3403914_-	Lipid A export ATP-binding/permease protein MsbA	W8CYL7	Bacillus_phage	2.5e-57	29.8
AXV26150.1\|3403950_3406215_-	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA
AXV26151.1\|3406421_3406706_-	Integration host factor beta subunit	A7KV42	Bacillus_phage	3.2e-10	40.2
AXV26152.1\|3406865_3408539_-	SSU ribosomal protein S1p	NA	NA	NA	NA
AXV26153.1\|3408649_3409333_-	Cytidylate kinase	NA	NA	NA	NA
AXV26154.1\|3409505_3410270_-\|protease	Putative metalloprotease yggG	NA	NA	NA	NA

DBSCAN-SWA_14

4659686 : 4670965

Enterobacteria_phage(44.44%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV27357.1\|4659686_4663544_+\|protease	Immunoglobulin A1 protease / autotransporter domain-containing T5aSS type secretion protein	Q9LA58	Enterobacterial_phage	2.4e-225	38.3
AXV27358.1\|4663590_4664172_+	hypothetical protein	NA	NA	NA	NA
AXV27359.1\|4664574_4664982_-	Mobile element protein	A0A0P0ZBS5	Stx2-converting_phage	2.7e-63	99.1
AXV27360.1\|4665050_4665554_+	Mobile element protein	NA	NA	NA	NA
AXV27361.1\|4665640_4666555_+	Mobile element protein	A0A0P0ZEB3	Stx2-converting_phage	3.1e-115	65.5
AXV27362.1\|4666845_4667208_+	Mobile element protein	Q6H9S5	Enterobacteria_phage	1.6e-35	98.7
AXV27363.1\|4667258_4667456_+	Mobile element protein	A0A0P0ZDM8	Stx2-converting_phage	1.3e-15	64.3
AXV27364.1\|4667532_4667808_+	Mobile element protein	Q6H9S4	Enterobacteria_phage	5.0e-45	97.8
AXV27365.1\|4667807_4668287_+	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.6e-73	97.8
AXV27366.1\|4668878_4670402_+	Retron-type RNA-directed DNA polymerase	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AXV27367.1\|4670593_4670965_+	Mobile element protein	Q6H9S3	Enterobacteria_phage	1.6e-65	99.2

DBSCAN-SWA_15

4682011 : 4699353

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXV27377.1\|4682011_4682197_-	Mobile element protein	A0A0P0ZEB3	Stx2-converting_phage	8.9e-22	74.1
AXV27378.1\|4682260_4683394_+	Mobile element protein	NA	NA	NA	NA
AXV27379.1\|4683442_4683814_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	1.6e-65	99.2
AXV27380.1\|4684005_4685529_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AXV27381.1\|4686120_4686600_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.6e-73	97.8
AXV27382.1\|4686599_4686875_-	Mobile element protein	Q6H9S4	Enterobacteria_phage	5.0e-45	97.8
AXV27383.1\|4687154_4687439_-	hypothetical protein	NA	NA	NA	NA
AXV27384.1\|4687503_4688628_-	Mobile element protein	A0A2L1IVA1	Escherichia_phage	3.3e-199	99.7
AXV27385.1\|4688694_4688829_-	hypothetical protein	NA	NA	NA	NA
AXV27386.1\|4688926_4689358_+	Mobile element protein	A0A0P0ZBS5	Stx2-converting_phage	5.4e-78	100.0
AXV27387.1\|4689420_4689639_+	Mobile element protein	NA	NA	NA	NA
AXV27388.1\|4689789_4693125_-\|protease	Per-activated serine protease autotransporter enterotoxin EspC	Q9LA54	Enterobacteria_phage	2.1e-262	44.2
AXV27389.1\|4694072_4694459_-	Mobile element protein	Q6H9S6	Enterobacteria_phage	6.1e-65	95.3
AXV27390.1\|4694635_4696159_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	6.2e-44	31.8
AXV27391.1\|4696750_4697230_-	Mobile element protein	Q6H9S3	Enterobacteria_phage	7.6e-73	97.8
AXV27392.1\|4697229_4697505_-	Mobile element protein	Q6H9S4	Enterobacteria_phage	5.0e-45	97.8
AXV27393.1\|4698079_4698553_+	Antirestriction protein klcA	A9J566	Pseudomonas_phage	1.1e-12	30.3
AXV27394.1\|4698568_4699045_+	DNA repair protein RadC	NA	NA	NA	NA
AXV27395.1\|4699131_4699353_+	putative protein YkfH	A0A142F0X9	Klebsiella_phage	5.5e-10	44.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP023062

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP023061

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection