CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
CP032172	Klebsiella pneumoniae strain AR_0076 plasmid unnamed5, complete sequence	0 crisprs	NA	0
CP032169	Klebsiella pneumoniae strain AR_0076 plasmid unnamed2, complete sequence	0 crisprs	RT	3
CP032168	Klebsiella pneumoniae strain AR_0076 plasmid unnamed1, complete sequence	0 crisprs	DEDDh	2
CP032167	Klebsiella pneumoniae strain AR_0076 chromosome, complete genome	0 crisprs	csa3,cas3,DEDDh,DinG,WYL	6
CP032170	Klebsiella pneumoniae strain AR_0076 plasmid unnamed3, complete sequence	0 crisprs	NA	0
CP032171	Klebsiella pneumoniae strain AR_0076 plasmid unnamed4, complete sequence	0 crisprs	NA	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

837 : 47243

Macacine_betaherpesvirus(23.81%)

integrase,transposase

attL 9262:9276|attR 29774:29788

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16359.1\|837_1842_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AXZ16360.1\|2170_2875_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXZ16361.1\|4343_5048_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXZ16362.1\|5237_5654_-	PIN domain-containing protein	NA	NA	NA	NA
AXZ16363.1\|5650_5881_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
AXZ16529.1\|6201_6429_-	hypothetical protein	NA	NA	NA	NA
AXZ16364.1\|6480_6699_+	plasmid maintenance protein CcdA	NA	NA	NA	NA
AXZ16365.1\|6700_7006_+	plasmid maintenance protein CcdB	NA	NA	NA	NA
AXZ16366.1\|7063_7375_+	hypothetical protein	NA	NA	NA	NA
AXZ16367.1\|7424_7760_+	hypothetical protein	NA	NA	NA	NA
AXZ16368.1\|7793_8810_+	hypothetical protein	NA	NA	NA	NA
AXZ16369.1\|9007_9787_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
9262:9276	attL	NA	NA	NA	NA
AXZ16370.1\|9844_10102_-	hypothetical protein	NA	NA	NA	NA
AXZ16371.1\|10875_11799_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.0e-166	93.2
AXZ16372.1\|12283_13264_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.2e-184	98.5
AXZ16530.1\|13302_13389_-	ABC transporter	NA	NA	NA	NA
AXZ16373.1\|13876_14617_+\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	5.4e-25	58.6
AXZ16374.1\|15314_16325_-	replication initiation protein	J9Q7H0	Salmonella_phage	3.0e-87	54.3
AXZ16375.1\|17075_18242_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	3.0e-224	97.7
AXZ16376.1\|18241_19213_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	9.2e-150	86.3
AXZ16377.1\|20212_20470_-	hypothetical protein	NA	NA	NA	NA
AXZ16378.1\|20495_20801_-	hypothetical protein	NA	NA	NA	NA
AXZ16379.1\|20854_21106_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
AXZ16380.1\|21184_22456_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	8.6e-156	64.0
AXZ16381.1\|22455_22881_-	peptidase	A0A1W6JNS2	Morganella_phage	2.9e-31	50.4
AXZ16382.1\|23035_23287_+	hypothetical protein	NA	NA	NA	NA
AXZ16383.1\|23286_24771_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
AXZ16384.1\|25019_25991_+	StbA family protein	A0A222YXF2	Escherichia_phage	1.4e-73	46.8
AXZ16385.1\|25993_26665_+	Mediator of plasmid stability	NA	NA	NA	NA
AXZ16386.1\|26725_26956_+	hypothetical protein	NA	NA	NA	NA
AXZ16387.1\|27392_28094_+	DNA methylase	A0A2I7RE86	Vibrio_phage	7.1e-27	36.7
AXZ16388.1\|28093_28315_+	hypothetical protein	NA	NA	NA	NA
AXZ16389.1\|28324_28744_+	DUF1380 domain-containing protein	NA	NA	NA	NA
AXZ16390.1\|28797_29565_+	hypothetical protein	NA	NA	NA	NA
AXZ16391.1\|30245_30674_+	antirestriction protein	NA	NA	NA	NA
29774:29788	attR	NA	NA	NA	NA
AXZ16392.1\|30716_31223_+	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	4.1e-08	31.4
AXZ16393.1\|31265_31457_+	hypothetical protein	NA	NA	NA	NA
AXZ16394.1\|31638_31899_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	6.3e-13	50.0
AXZ16395.1\|31933_32254_+	hypothetical protein	NA	NA	NA	NA
AXZ16396.1\|32825_32915_+	single-stranded DNA-binding protein	NA	NA	NA	NA
AXZ16397.1\|32933_33161_+	hypothetical protein	NA	NA	NA	NA
AXZ16398.1\|33252_33483_+	hypothetical protein	NA	NA	NA	NA
AXZ16399.1\|33534_34890_+	DUF3560 domain-containing protein	NA	NA	NA	NA
AXZ16400.1\|34937_35501_+	SAM-dependent methyltransferase	M4M9L8	Vibrio_phage	1.7e-18	42.0
AXZ16401.1\|35395_35716_-	hypothetical protein	NA	NA	NA	NA
AXZ16402.1\|36330_36873_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.0e-49	75.8
AXZ16403.1\|36921_37170_+	DUF905 domain-containing protein	NA	NA	NA	NA
AXZ16404.1\|37239_39297_+	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	2.6e-21	25.4
AXZ16405.1\|39341_39773_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
AXZ16406.1\|39769_40498_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
AXZ16407.1\|40494_40821_+	theronine dehydrogenase	NA	NA	NA	NA
AXZ16408.1\|40876_41251_+	hypothetical protein	NA	NA	NA	NA
AXZ16409.1\|41451_42826_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.4e-79	74.1
AXZ16410.1\|42996_44037_+	ATP-binding protein	M4QMW8	Micromonas_pusilla_virus	9.5e-20	35.2
AXZ16411.1\|44185_45847_+	peptidase S8	NA	NA	NA	NA
AXZ16412.1\|45902_47243_+\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

66147 : 108749

Escherichia_phage(35.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16436.1\|66147_69135_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.4e-296	53.7
AXZ16437.1\|69171_69876_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AXZ16438.1\|69990_70197_+	hypothetical protein	NA	NA	NA	NA
AXZ16439.1\|70578_72012_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
AXZ16440.1\|72045_73212_-	restriction endonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
AXZ16441.1\|73270_73975_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXZ16442.1\|74185_75181_+	nucleotidyltransferase	NA	NA	NA	NA
AXZ16443.1\|75184_76117_+	hypothetical protein	NA	NA	NA	NA
AXZ16444.1\|76230_77351_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.8
AXZ16445.1\|77448_78153_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AXZ16446.1\|79707_80973_-	glycoside hydrolase family 27 protein	NA	NA	NA	NA
AXZ16447.1\|81033_82467_-	melibiose:sodium transporter MelB	NA	NA	NA	NA
AXZ16448.1\|82805_83510_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AXZ16449.1\|83589_84201_+	DUF2913 family protein	NA	NA	NA	NA
AXZ16450.1\|84385_85342_-	hypothetical protein	NA	NA	NA	NA
AXZ16451.1\|85722_86427_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXZ16452.1\|86779_87349_+	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
AXZ16453.1\|88105_89575_+	HNH endonuclease	G0X580	Salmonella_phage	5.5e-21	51.3
AXZ16454.1\|90094_90832_-	hypothetical protein	NA	NA	NA	NA
AXZ16455.1\|90969_91656_-	NYN domain-containing protein	NA	NA	NA	NA
AXZ16456.1\|92148_92364_-	hypothetical protein	NA	NA	NA	NA
AXZ16457.1\|92526_93231_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
AXZ16458.1\|93176_93437_-	hypothetical protein	NA	NA	NA	NA
AXZ16459.1\|93982_94369_+	hypothetical protein	NA	NA	NA	NA
AXZ16460.1\|94377_94569_+	plasmid stabilization protein	NA	NA	NA	NA
AXZ16461.1\|95580_96363_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	1.7e-133	95.9
AXZ16462.1\|96336_99324_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.4e-296	53.7
AXZ16463.1\|99491_100133_+	resolvase	NA	NA	NA	NA
AXZ16464.1\|100562_101894_+	voltage-gated chloride channel protein	A0A1X9I5Z9	Streptococcus_phage	1.8e-42	36.3
AXZ16465.1\|101893_102241_+	hypothetical protein	NA	NA	NA	NA
AXZ16466.1\|102506_102701_+	hypothetical protein	NA	NA	NA	NA
AXZ16467.1\|103300_103489_-	hypothetical protein	NA	NA	NA	NA
AXZ16468.1\|104145_104574_-	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA
AXZ16469.1\|104767_105763_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	7.0e-20	28.3
AXZ16470.1\|106607_107759_-	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	9.5e-21	27.9
AXZ16471.1\|107783_108749_-\|protease	Zn-dependent protease	NA	NA	NA	NA

DBSCAN-SWA_3

129022 : 137692

Stx2-converting_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16488.1\|129022_129946_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	7.8e-167	92.8
AXZ16534.1\|130608_131517_+	HNH endonuclease	NA	NA	NA	NA
AXZ16489.1\|131806_133345_-\|transposase	IS66-like element ISKpn24 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.1e-281	94.7
AXZ16490.1\|133393_133741_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
AXZ16491.1\|133737_134142_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8
AXZ16492.1\|134367_134718_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.2e-19	53.3
AXZ16493.1\|134861_135293_-	silver-binding protein SilE	NA	NA	NA	NA
AXZ16494.1\|135543_137019_-	Cu(+)/Ag(+) sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	30.1
AXZ16495.1\|137011_137692_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.1e-31	35.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032168

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

83935 : 101590

Escherichia_phage(50.0%)

integrase,transposase

attL 89619:89678|attR 101715:101837

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16259.1\|83935_84940_-\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AXZ16260.1\|85018_85453_-	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AXZ16261.1\|85524_85875_+	mercuric ion transporter MerT	NA	NA	NA	NA
AXZ16262.1\|85888_86164_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
AXZ16352.1\|86199_86622_+	mercury transport protein MerC	NA	NA	NA	NA
AXZ16263.1\|86673_88368_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
AXZ16264.1\|88385_88748_+	transcriptional regulator	NA	NA	NA	NA
AXZ16265.1\|88744_88981_+	mercury resistance protein	NA	NA	NA	NA
AXZ16266.1\|88977_89685_+	EAL domain-containing protein	NA	NA	NA	NA
89619:89678	attL	NA	NA	NA	NA
AXZ16267.1\|89723_91028_+\|integrase	integrase	NA	NA	NA	NA
AXZ16268.1\|91074_91779_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.0e-139	99.6
AXZ16269.1\|91724_91982_-	hypothetical protein	NA	NA	NA	NA
AXZ16270.1\|91920_92934_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
AXZ16271.1\|93100_93901_+	subclass B1 metallo-beta-lactamase VIM-1	NA	NA	NA	NA
AXZ16272.1\|93994_94453_+	aminoglycoside N-acetyltransferase AAC(6')-Il	NA	NA	NA	NA
AXZ16273.1\|94595_95069_+	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
AXZ16274.1\|95161_95953_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
AXZ16275.1\|96782_97487_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AXZ16276.1\|97608_98514_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
AXZ16277.1\|98510_99749_+	MFS transporter	NA	NA	NA	NA
AXZ16278.1\|99748_100333_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
AXZ16279.1\|100278_100635_+	hypothetical protein	NA	NA	NA	NA
AXZ16280.1\|100825_101590_-\|transposase	IS6 family transposase IS6100	A0A077SL39	Escherichia_phage	4.3e-86	65.7
101715:101837	attR	NA	NA	NA	NA

DBSCAN-SWA_2

105852 : 124846

Salmonella_phage(33.33%)

integrase,transposase

attL 122578:122593|attR 127488:127503

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16288.1\|105852_107394_-\|transposase	IS91 family transposase	NA	NA	NA	NA
AXZ16289.1\|107798_108638_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
AXZ16290.1\|108631_108979_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
AXZ16291.1\|109142_109934_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
AXZ16292.1\|109939_110230_-	DUF1010 domain-containing protein	NA	NA	NA	NA
AXZ16293.1\|110341_110839_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
AXZ16294.1\|110983_111997_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
AXZ16295.1\|111941_112265_+\|transposase	transposase	NA	NA	NA	NA
AXZ16296.1\|112302_112860_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
AXZ16297.1\|112862_115835_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
AXZ16298.1\|115913_116918_+\|transposase	IS110 family transposase IS4321	NA	NA	NA	NA
AXZ16299.1\|117533_117935_+	hypothetical protein	NA	NA	NA	NA
AXZ16300.1\|118048_118774_+	hypothetical protein	NA	NA	NA	NA
AXZ16301.1\|118748_118952_-	hypothetical protein	NA	NA	NA	NA
122578:122593	attL	NA	NA	NA	NA
AXZ16302.1\|122677_122998_+	hypothetical protein	NA	NA	NA	NA
AXZ16303.1\|123016_123304_+	hypothetical protein	NA	NA	NA	NA
AXZ16304.1\|123296_123833_+	hypothetical protein	NA	NA	NA	NA
AXZ16305.1\|123835_124846_+\|integrase	integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
127488:127503	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. CP032167

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

808950 : 895327

100

Enterobacteria_phage(20.0%)

tail,head,terminase,transposase,capsid,portal,tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ12021.1\|808950_810036_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
AXZ12022.1\|810093_810783_-	uracil-DNA glycosylase	A0A077BCN4	Equid_alphaherpesvirus	1.3e-57	53.0
AXZ12023.1\|811095_811479_+	autonomous glycyl radical cofactor GrcA	A0A193GZ98	Escherichia_phage	4.0e-32	79.3
AXZ12024.1\|811524_812856_-	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	6.2e-48	31.9
AXZ12025.1\|812987_813725_+\|tRNA	tRNA (adenosine(37)-N6)-methyltransferase TrmM	NA	NA	NA	NA
AXZ12026.1\|813709_815329_-	L-aspartate oxidase	NA	NA	NA	NA
AXZ12027.1\|815749_816325_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
AXZ12028.1\|816357_817008_+	anti-sigma-E factor RseA	NA	NA	NA	NA
AXZ12029.1\|817007_817964_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
AXZ12030.1\|817960_818440_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
AXZ12031.1\|818625_820425_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	5.5e-23	25.4
AXZ12032.1\|820440_821415_+	signal peptidase I	NA	NA	NA	NA
AXZ12033.1\|821664_822345_+	ribonuclease 3	A0A0P0YM82	Yellowstone_lake_phycodnavirus	1.6e-20	29.7
AXZ12034.1\|822341_823247_+	GTPase Era	NA	NA	NA	NA
AXZ12035.1\|823258_823996_+	DNA repair protein RecO	NA	NA	NA	NA
AXZ12036.1\|824007_824739_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
AXZ12037.1\|824738_825119_+	holo-ACP synthase	NA	NA	NA	NA
AXZ12038.1\|825131_825392_-	ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.7e-18	54.7
AXZ15959.1\|825606_827010_+	recombinase	NA	NA	NA	NA
AXZ12039.1\|827367_827580_-	hypothetical protein	NA	NA	NA	NA
AXZ12040.1\|827576_827909_-	hypothetical protein	H6WRY2	Salmonella_phage	9.4e-14	52.9
AXZ12041.1\|827932_828208_-	hypothetical protein	Q333I1	Escherichia_virus	2.0e-09	48.7
AXZ15960.1\|828200_828500_-	hypothetical protein	E5AGF1	Erwinia_phage	1.4e-29	67.0
AXZ12042.1\|828728_829652_-\|transposase	IS5 family transposase	NA	NA	NA	NA
AXZ12043.1\|829676_829898_+	hypothetical protein	NA	NA	NA	NA
AXZ12044.1\|830182_830425_-	hypothetical protein	NA	NA	NA	NA
AXZ12045.1\|830417_830819_-	hypothetical protein	NA	NA	NA	NA
AXZ12046.1\|830821_831580_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	6.0e-40	37.2
AXZ15961.1\|831591_832122_-	hypothetical protein	A0A1B5FPB4	Escherichia_phage	3.8e-41	57.4
AXZ12047.1\|832184_832409_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	4.0e-16	57.7
AXZ12048.1\|832405_832750_-	hypothetical protein	NA	NA	NA	NA
AXZ12049.1\|832746_832944_-	hypothetical protein	NA	NA	NA	NA
AXZ12050.1\|832927_833155_-	hypothetical protein	NA	NA	NA	NA
AXZ12051.1\|833258_833462_-	hypothetical protein	NA	NA	NA	NA
AXZ12052.1\|834024_834756_-	phage repressor protein C	A0A2H4FNG6	Salmonella_phage	4.9e-79	59.1
AXZ15962.1\|834890_835109_+	hypothetical protein	NA	NA	NA	NA
AXZ12053.1\|835089_835281_+	DUF4222 domain-containing protein	NA	NA	NA	NA
AXZ12054.1\|835277_836153_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	4.5e-63	60.2
AXZ12055.1\|836149_837031_+	hypothetical protein	K7PLU3	Enterobacteria_phage	1.5e-61	46.1
AXZ12056.1\|837027_838401_+	replicative DNA helicase	Q8W640	Enterobacteria_phage	5.3e-135	55.2
AXZ12057.1\|838400_838805_+	antitermination protein	S5M7R9	Escherichia_phage	1.8e-27	47.2
AXZ12058.1\|839175_839574_+	hypothetical protein	NA	NA	NA	NA
AXZ12059.1\|839557_839863_+	hypothetical protein	NA	NA	NA	NA
AXZ12060.1\|839859_840333_+	lysozyme	H9C148	Vibrio_phage	4.0e-26	39.7
AXZ12061.1\|840332_840587_+	hypothetical protein	S4TWQ5	Salmonella_phage	3.4e-11	53.7
AXZ15963.1\|840598_840877_+	hypothetical protein	G8C7W1	Escherichia_phage	1.8e-05	42.9
AXZ12062.1\|841179_841452_+	hypothetical protein	G8C7W3	Escherichia_phage	2.0e-17	52.7
AXZ12063.1\|841578_841773_+	hypothetical protein	NA	NA	NA	NA
AXZ12064.1\|841952_842312_+	hypothetical protein	NA	NA	NA	NA
AXZ12065.1\|842313_842652_+	HNH endonuclease	F1C587	Cronobacter_phage	2.2e-42	71.3
AXZ12066.1\|842824_843292_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	6.5e-45	59.7
AXZ12067.1\|843245_844991_+\|terminase	phage terminase small subunit P27 family	M4QNU0	Tetraselmis_viridis_virus	3.9e-135	43.6
AXZ12068.1\|844990_846295_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	4.5e-192	75.1
AXZ12069.1\|846306_847155_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	6.4e-107	70.9
AXZ12070.1\|847164_848382_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	9.3e-184	81.7
AXZ12071.1\|848520_848724_-	hypothetical protein	NA	NA	NA	NA
AXZ12072.1\|848722_849052_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	1.4e-22	51.0
AXZ12073.1\|849053_849443_+\|head,tail	head-tail adaptor protein	M1FJ87	Enterobacteria_phage	6.7e-35	59.7
AXZ12074.1\|849435_849942_+	hypothetical protein	Q8HAC8	Salmonella_phage	1.5e-71	78.9
AXZ12075.1\|849938_850499_+	hypothetical protein	A0A192Y5U4	Salmonella_phage	3.7e-63	62.4
AXZ12076.1\|850502_850691_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	5.5e-11	71.1
AXZ12077.1\|850690_852187_+\|tail	phage tail protein	A0A192Y7L1	Salmonella_phage	1.0e-187	67.2
AXZ12078.1\|852186_852543_+\|tail	phage tail protein	U5P076	Shigella_phage	2.5e-52	84.7
AXZ12079.1\|852539_852863_+\|tail	phage tail assembly protein	U5P0R5	Shigella_phage	6.6e-28	63.2
AXZ12080.1\|852947_854786_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	5.5e-188	58.3
AXZ15964.1\|855106_855295_+	hypothetical protein	NA	NA	NA	NA
AXZ12081.1\|855350_856679_+	DNA circularization protein	S5FUX4	Shigella_phage	7.6e-131	54.5
AXZ12082.1\|856675_857749_+\|plate	baseplate protein	M1FN92	Enterobacteria_phage	5.8e-137	67.1
AXZ12083.1\|857748_858306_+\|plate	baseplate assembly protein	Q8W617	Enterobacteria_phage	6.6e-60	65.9
AXZ12084.1\|858302_858716_+	hypothetical protein	A0A192Y6D0	Salmonella_phage	6.6e-41	59.1
AXZ12085.1\|858708_859776_+\|plate	phage baseplate protein	M1FQW3	Enterobacteria_phage	7.3e-124	61.1
AXZ12086.1\|859766_860348_+	hypothetical protein	O22003	Shigella_phage	1.6e-69	64.9
AXZ12087.1\|860350_861229_+	hypothetical protein	U5P0I1	Shigella_phage	1.8e-19	63.0
AXZ12088.1\|861230_861635_+\|tail	tail fiber assembly protein	U5P083	Shigella_phage	4.2e-32	55.2
AXZ12089.1\|863304_864306_-	glycosyltransferase	U5P087	Shigella_phage	4.7e-48	40.6
AXZ12090.1\|864302_864683_-	GtrA family protein	NA	NA	NA	NA
AXZ12091.1\|865159_865492_-	hypothetical protein	NA	NA	NA	NA
AXZ12092.1\|865739_866588_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
AXZ12093.1\|866801_867437_+	acid phosphatase AphA	NA	NA	NA	NA
AXZ12094.1\|867466_868009_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	2.6e-05	33.8
AXZ12095.1\|868005_869622_-	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
AXZ12096.1\|869797_873685_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	5.0e-130	58.9
AXZ12097.1\|874274_875696_+	sensor histidine kinase	W8CYF6	Bacillus_phage	1.1e-13	25.8
AXZ12098.1\|875704_876412_+	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA
AXZ12099.1\|876398_877736_+	two-component system response regulator GlrR	W8CYM9	Bacillus_phage	1.0e-10	35.0
AXZ12100.1\|877801_878140_+	nitrogen regulatory protein P-II	NA	NA	NA	NA
AXZ12101.1\|878214_879405_-	NO-inducible flavohemoprotein	NA	NA	NA	NA
AXZ12102.1\|879445_879712_+	hypothetical protein	NA	NA	NA	NA
AXZ12103.1\|879730_880984_+	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	1.9e-99	53.1
AXZ15965.1\|881039_881462_-	DoxX family protein	NA	NA	NA	NA
AXZ12104.1\|881535_882732_-	ROK family transcriptional regulator	NA	NA	NA	NA
AXZ12105.1\|886189_887626_+	MFS transporter	NA	NA	NA	NA
AXZ12106.1\|887625_888459_+	aldose 1-epimerase	NA	NA	NA	NA
AXZ12107.1\|888541_889678_+	3-phenylpropionate MFS transporter	NA	NA	NA	NA
AXZ12108.1\|889674_890952_-	stationary phase inducible protein CsiE	NA	NA	NA	NA
AXZ12109.1\|891076_891715_+	DUF1007 family protein	NA	NA	NA	NA
AXZ12110.1\|891705_892686_+	nickel transporter	NA	NA	NA	NA
AXZ12111.1\|892785_893622_+	hypothetical protein	NA	NA	NA	NA
AXZ12112.1\|893668_894472_-	inositol-1-monophosphatase	NA	NA	NA	NA
AXZ12113.1\|894592_895327_+\|tRNA	tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ	NA	NA	NA	NA

DBSCAN-SWA_2

1284773 : 1291678

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ15981.1\|1284773_1285637_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
AXZ12442.1\|1285647_1286421_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
AXZ15982.1\|1286661_1287555_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
AXZ12443.1\|1287800_1289162_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
AXZ12444.1\|1289480_1290203_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
AXZ12445.1\|1290199_1291678_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

1485401 : 1534335

Escherichia_phage(18.0%)

tRNA,terminase,lysis,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ12614.1\|1485401_1487135_-\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	2.3e-87	33.8
AXZ12615.1\|1487370_1487940_+	VOC family protein	NA	NA	NA	NA
AXZ12616.1\|1488016_1488760_+	copper homeostasis protein CutC	NA	NA	NA	NA
AXZ12617.1\|1488841_1489846_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
AXZ12618.1\|1489842_1490586_-	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	4.1e-25	30.0
AXZ12619.1\|1490625_1491021_-	hypothetical protein	NA	NA	NA	NA
AXZ12620.1\|1491073_1491853_-	hypothetical protein	Q859D1	Escherichia_coli_phage	1.1e-60	82.7
AXZ12621.1\|1491849_1493109_-	DUF3596 domain-containing protein	A0A286S1S8	Klebsiella_phage	1.2e-223	90.4
AXZ12622.1\|1493156_1493399_-	excisionase	A0A286S2A4	Klebsiella_phage	2.0e-29	81.3
AXZ12623.1\|1493402_1493621_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	8.6e-08	51.9
AXZ12624.1\|1493617_1494103_-	hypothetical protein	A0A076G835	Escherichia_phage	2.1e-30	61.9
AXZ12625.1\|1494099_1494324_-	hypothetical protein	G8C7U9	Escherichia_phage	7.0e-21	73.2
AXZ12626.1\|1494320_1494542_-	hypothetical protein	NA	NA	NA	NA
AXZ12627.1\|1494538_1495309_-	dcm methylase	D5LH17	Escherichia_phage	1.9e-65	51.0
AXZ12628.1\|1495305_1495824_-	HNH endonuclease	A5H1J6	Xanthomonas_virus	1.7e-33	47.6
AXZ12629.1\|1495956_1496385_-	regulator	M9NYX4	Enterobacteria_phage	3.4e-64	81.0
AXZ12630.1\|1496381_1497062_-	exonuclease	A0A0M3ULE0	Salmonella_phage	7.9e-124	92.9
AXZ12631.1\|1497058_1497904_-	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	2.6e-68	58.8
AXZ12632.1\|1497919_1498204_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	4.7e-30	63.8
AXZ12633.1\|1498292_1498487_-	hypothetical protein	NA	NA	NA	NA
AXZ15995.1\|1498722_1498998_-	hypothetical protein	A0A2D1GLY1	Escherichia_phage	2.1e-27	65.9
AXZ12634.1\|1499847_1500252_-	hypothetical protein	NA	NA	NA	NA
AXZ12635.1\|1500435_1501146_-	helix-turn-helix domain-containing protein	K7P7K3	Enterobacteria_phage	1.1e-91	71.0
AXZ12636.1\|1501250_1501442_+	hypothetical protein	A0A2R2Z333	Escherichia_phage	1.4e-09	57.1
AXZ12637.1\|1501522_1501744_+	transcriptional regulator	NA	NA	NA	NA
AXZ12638.1\|1501872_1502220_+	HNH endonuclease	A0A1C9LVX4	Vibrio_phage	1.3e-10	36.2
AXZ12639.1\|1502216_1502942_+	helix-turn-helix domain-containing protein	A0A077KB11	Edwardsiella_phage	2.7e-37	72.6
AXZ12640.1\|1502938_1503715_+	replication protein	A0A193GYX1	Enterobacter_phage	8.8e-95	65.0
AXZ12641.1\|1503714_1504017_+	MarR family transcriptional regulator	NA	NA	NA	NA
AXZ15996.1\|1504019_1504463_+	hypothetical protein	E7C9P6	Salmonella_phage	2.3e-23	52.4
AXZ12642.1\|1504459_1504885_+	hypothetical protein	NA	NA	NA	NA
AXZ12643.1\|1504881_1505457_+	ead/Ea22-like family protein	K7PJQ4	Enterobacteria_phage	5.0e-55	64.4
AXZ12644.1\|1505457_1505796_+	hypothetical protein	NA	NA	NA	NA
AXZ15997.1\|1506500_1506797_+	hypothetical protein	A5LH60	Enterobacteria_phage	2.5e-05	39.2
AXZ12645.1\|1506796_1507657_+	hypothetical protein	NA	NA	NA	NA
AXZ12646.1\|1508049_1508517_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	4.9e-32	45.8
AXZ12647.1\|1508497_1508668_+	NinE family protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
AXZ12648.1\|1508660_1509242_+	recombination protein NinG	E7C9S3	Salmonella_phage	5.5e-41	46.3
AXZ12649.1\|1509238_1509469_+	hypothetical protein	NA	NA	NA	NA
AXZ12650.1\|1509465_1509606_+	YlcG family protein	NA	NA	NA	NA
AXZ12651.1\|1509602_1510412_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.3e-117	75.1
AXZ12652.1\|1510917_1511166_+\|lysis	lysis protein	NA	NA	NA	NA
AXZ12653.1\|1511168_1511699_+	lysozyme	G9L6J6	Escherichia_phage	4.2e-80	79.7
AXZ12654.1\|1511695_1512085_+	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	3.1e-24	50.0
AXZ12655.1\|1512364_1512961_+	hypothetical protein	NA	NA	NA	NA
AXZ12656.1\|1513289_1513925_+	hypothetical protein	I6S676	Salmonella_phage	2.3e-101	81.1
AXZ12657.1\|1513956_1514442_+	hypothetical protein	H9C190	Pectobacterium_phage	2.2e-67	80.1
AXZ12658.1\|1514443_1516120_+\|terminase	terminase	H9C191	Pectobacterium_phage	2.3e-249	74.4
AXZ12659.1\|1516120_1517641_+	hypothetical protein	A0A2R3UAL5	Myoviridae_environmental_samples	4.0e-107	45.4
AXZ12660.1\|1517693_1518392_+\|head	phage head morphogenesis protein	H9C0V1	Aeromonas_phage	4.8e-60	50.9
AXZ12661.1\|1518395_1519565_+	DNA primase	A0A219YCD3	Aeromonas_phage	4.5e-58	37.5
AXZ12662.1\|1519566_1520049_+	hypothetical protein	A0A219YBF2	Aeromonas_phage	2.7e-33	51.6
AXZ12663.1\|1520048_1521086_+	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	1.9e-84	50.0
AXZ12664.1\|1521087_1521414_+	hypothetical protein	H9C0V9	Aeromonas_phage	8.1e-10	42.5
AXZ12665.1\|1521413_1521857_+	DUF4054 domain-containing protein	A0A1X9SF97	Acinetobacter_phage	4.3e-14	40.5
AXZ12666.1\|1521859_1522423_+	hypothetical protein	H9C0W2	Aeromonas_phage	3.7e-18	32.9
AXZ15998.1\|1522419_1522788_+	hypothetical protein	Q6UJ26	Burkholderia_virus	2.1e-06	29.8
AXZ12667.1\|1522769_1523321_+	hypothetical protein	NA	NA	NA	NA
AXZ12668.1\|1523324_1524806_+	hypothetical protein	Q2NPD0	Xanthomonas_phage	4.6e-60	34.8
AXZ12669.1\|1524805_1525249_+	hypothetical protein	NA	NA	NA	NA
AXZ12670.1\|1525428_1525959_+	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	1.2e-87	93.7
AXZ12671.1\|1526020_1526497_+	hypothetical protein	A0A077KC08	Edwardsiella_phage	4.7e-06	28.5
AXZ12672.1\|1526701_1528627_+	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	7.6e-39	53.8
AXZ12673.1\|1528630_1529473_+	hypothetical protein	A0A077KGW3	Edwardsiella_phage	1.0e-27	32.1
AXZ12674.1\|1529474_1529780_+	hypothetical protein	A0A077K9U4	Edwardsiella_phage	6.2e-20	46.5
AXZ12675.1\|1529776_1530631_+	hypothetical protein	A0A077KC17	Edwardsiella_phage	2.4e-29	29.8
AXZ12676.1\|1530632_1531220_+	hypothetical protein	A1Z003	Burkholderia_virus	9.8e-06	23.2
AXZ12677.1\|1531286_1531736_-	hypothetical protein	NA	NA	NA	NA
AXZ12678.1\|1531902_1532253_+	hypothetical protein	NA	NA	NA	NA
AXZ12679.1\|1532738_1533095_+	hypothetical protein	NA	NA	NA	NA
AXZ12680.1\|1533102_1534335_+	hypothetical protein	A0A077KGW9	Edwardsiella_phage	3.0e-105	50.7

DBSCAN-SWA_4

2303120 : 2314007

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ13401.1\|2303120_2306228_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
AXZ13402.1\|2306282_2307548_+	MFS transporter	NA	NA	NA	NA
AXZ13403.1\|2307578_2308667_-	chromosome segregation protein SMC	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
AXZ13404.1\|2308753_2309014_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
AXZ13405.1\|2309311_2310172_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
AXZ13406.1\|2310192_2310954_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
AXZ13407.1\|2311214_2312117_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
AXZ13408.1\|2312128_2313394_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	2.5e-232	99.0
AXZ13409.1\|2313386_2314007_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_5

2495880 : 2590734

Salmonella_phage(18.0%)

terminase,transposase,plate,holin,integrase,protease

attL 2509872:2509890|attR 2599174:2599192

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ13574.1\|2495880_2496804_+\|transposase	IS5 family transposase	NA	NA	NA	NA
AXZ16042.1\|2496977_2497253_-	hypothetical protein	NA	NA	NA	NA
AXZ13575.1\|2497923_2498847_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.4e-176	99.3
AXZ13576.1\|2499656_2502176_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	1.4e-19	32.6
AXZ13577.1\|2502168_2504823_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	3.8e-97	33.7
AXZ13578.1\|2505087_2505579_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
AXZ13579.1\|2505583_2507290_-	OmpA family protein	NA	NA	NA	NA
AXZ13580.1\|2507286_2507976_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
AXZ16043.1\|2507972_2509313_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
AXZ13581.1\|2509325_2510870_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
2509872:2509890	attL	NA	NA	NA	NA
AXZ13582.1\|2510912_2511404_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
AXZ13583.1\|2512044_2512611_+\|protease	protease	NA	NA	NA	NA
AXZ13584.1\|2512809_2514342_-	phosphohydrolase	A0A1B1ISR1	uncultured_Mediterranean_phage	5.2e-22	30.0
AXZ13585.1\|2514558_2515320_-	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	4.1e-20	32.1
AXZ13586.1\|2515428_2516343_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXZ13587.1\|2516643_2516832_+	cold-shock protein	NA	NA	NA	NA
AXZ13588.1\|2516902_2517211_-	anti-sigma regulatory factor	NA	NA	NA	NA
AXZ13589.1\|2517378_2518248_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.4e-50	42.1
AXZ13590.1\|2518326_2519529_-	MFS transporter	NA	NA	NA	NA
AXZ13591.1\|2519601_2520738_-	alpha/beta hydrolase	NA	NA	NA	NA
AXZ13592.1\|2520910_2521795_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXZ13593.1\|2521919_2522753_-	hypothetical protein	NA	NA	NA	NA
AXZ13594.1\|2522983_2523370_+	VOC family protein	NA	NA	NA	NA
AXZ13595.1\|2523537_2525154_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
AXZ13596.1\|2525339_2526047_+	murein tripeptide amidase MpaA	NA	NA	NA	NA
AXZ13597.1\|2526043_2527009_-	L-Ala-D/L-Glu epimerase	NA	NA	NA	NA
AXZ13598.1\|2527111_2527618_+	thiol peroxidase	NA	NA	NA	NA
AXZ16044.1\|2527688_2528711_-	AbrB family transcriptional regulator	NA	NA	NA	NA
AXZ13599.1\|2528842_2530384_-	transcriptional regulator TyrR	NA	NA	NA	NA
AXZ13600.1\|2530556_2531870_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AXZ13601.1\|2531983_2532883_+	LysR family transcriptional regulator	NA	NA	NA	NA
AXZ13602.1\|2532972_2534034_-	TIGR01620 family protein	NA	NA	NA	NA
AXZ13603.1\|2534030_2535428_-	YcjX family protein	NA	NA	NA	NA
AXZ13604.1\|2535530_2535749_-	phage shock protein PspD	NA	NA	NA	NA
AXZ13605.1\|2535777_2536137_-	envelope stress response membrane protein PspC	NA	NA	NA	NA
AXZ13606.1\|2536136_2536361_-	envelope stress response membrane protein PspB	NA	NA	NA	NA
AXZ13607.1\|2536419_2537085_-	phage shock protein PspA	NA	NA	NA	NA
AXZ16045.1\|2537252_2538227_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA
AXZ13608.1\|2538217_2539609_-	MFS transporter	NA	NA	NA	NA
AXZ13609.1\|2539634_2540804_-	amidohydrolase	NA	NA	NA	NA
AXZ13610.1\|2540975_2543285_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
AXZ13611.1\|2543263_2544094_-	XRE family transcriptional regulator	NA	NA	NA	NA
AXZ13612.1\|2544204_2545110_+	NAD-dependent dehydratase	NA	NA	NA	NA
AXZ13613.1\|2545443_2547087_+	peptide ABC transporter substrate-binding protein SapA	NA	NA	NA	NA
AXZ13614.1\|2547083_2548049_+	peptide ABC transporter permease SapB	NA	NA	NA	NA
AXZ13615.1\|2548253_2548922_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	5.8e-79	59.5
AXZ13616.1\|2548933_2549866_-	DUF2971 domain-containing protein	NA	NA	NA	NA
AXZ13617.1\|2549908_2551174_-	DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.8e-209	82.9
AXZ13618.1\|2551175_2551595_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	58.3
AXZ13619.1\|2552143_2552566_-	hypothetical protein	K7P834	Enterobacteria_phage	2.8e-26	45.3
AXZ13620.1\|2556379_2556775_-	protein singed	A0A0S2SYB7	Pseudomonas_phage	3.3e-13	43.3
AXZ13621.1\|2557096_2558050_-	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
AXZ13622.1\|2558060_2558840_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.6e-67	64.5
AXZ13623.1\|2558924_2560037_-	hypothetical protein	I6PD76	Cronobacter_phage	5.6e-111	55.5
AXZ13624.1\|2560020_2561421_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	6.4e-128	53.7
AXZ13625.1\|2561420_2562728_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	8.8e-148	58.4
AXZ13626.1\|2562705_2563710_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.3e-37	45.0
AXZ13627.1\|2564258_2564444_-	hypothetical protein	NA	NA	NA	NA
AXZ13628.1\|2564572_2564818_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
AXZ13629.1\|2565631_2565826_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.4e-25	89.1
AXZ13630.1\|2565776_2566052_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
AXZ13631.1\|2566048_2566393_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
AXZ13632.1\|2566389_2566929_-	hypothetical protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
AXZ13633.1\|2566925_2567237_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	3.8e-49	100.0
AXZ13634.1\|2567837_2568284_+	hypothetical protein	NA	NA	NA	NA
AXZ13635.1\|2568600_2569383_-	antitermination protein	F1C595	Cronobacter_phage	2.9e-114	79.1
AXZ13636.1\|2569379_2569748_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	2.9e-40	62.9
AXZ13637.1\|2569744_2570041_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.2e-36	72.9
AXZ13638.1\|2570043_2570250_-	hypothetical protein	H6WRY8	Salmonella_phage	1.1e-23	72.7
AXZ13639.1\|2570249_2570846_-	hypothetical protein	K7PKS6	Enterobacteria_phage	4.1e-92	81.1
AXZ13640.1\|2570880_2571129_-	hypothetical protein	K7PHG9	Enterobacteria_phage	1.5e-27	66.7
AXZ16046.1\|2571233_2571467_-	DNA damage-inducible protein I	K7PM44	Enterobacteria_phage	2.9e-25	68.8
AXZ13641.1\|2572329_2572719_+	hypothetical protein	NA	NA	NA	NA
AXZ13642.1\|2573323_2573860_-	hypothetical protein	NA	NA	NA	NA
AXZ13643.1\|2574173_2574437_-	hypothetical protein	S5MQM0	Escherichia_phage	2.2e-29	82.3
AXZ13644.1\|2574429_2574633_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	1.3e-29	89.6
AXZ13645.1\|2574629_2575415_-	hypothetical protein	C7BGF1	Burkholderia_phage	2.5e-65	53.3
AXZ13646.1\|2575407_2575743_-	DUF977 family protein	H6WRX9	Salmonella_phage	9.9e-11	43.0
AXZ13647.1\|2575750_2576500_-	DNA replication protein DnaC	H6WRX8	Salmonella_phage	1.3e-119	83.1
AXZ13648.1\|2576502_2577423_-	DNA-binding protein	V5URT9	Shigella_phage	4.5e-90	53.9
AXZ13649.1\|2577712_2578249_-	hypothetical protein	K7PJT7	Enterobacteria_phage	2.1e-63	70.4
AXZ13650.1\|2578251_2578485_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
AXZ13651.1\|2578589_2578985_+	XRE family transcriptional regulator	K7PM35	Enterobacteria_phage	2.0e-47	73.3
AXZ13652.1\|2579545_2579749_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	2.0e-19	74.6
AXZ13653.1\|2580032_2580341_+	hypothetical protein	G8C7T6	Escherichia_phage	1.7e-25	62.2
AXZ13654.1\|2580432_2580531_+	hypothetical protein	NA	NA	NA	NA
AXZ13655.1\|2580637_2580829_+	DUF1482 family protein	NA	NA	NA	NA
AXZ13656.1\|2580837_2580993_+	hypothetical protein	K7PGY4	Enterobacteria_phage	1.5e-14	71.2
AXZ13657.1\|2581130_2584082_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	2.4e-278	54.0
AXZ13658.1\|2584094_2585204_+	enterohemolysin	H6WRX0	Salmonella_phage	9.4e-183	85.9
AXZ16047.1\|2585247_2585904_+	hypothetical protein	M1F3E2	Salmonella_phage	7.7e-68	62.7
AXZ13659.1\|2585900_2586209_+	hypothetical protein	I6PD68	Cronobacter_phage	7.1e-24	55.9
AXZ16048.1\|2586216_2586456_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	8.0e-23	70.1
AXZ13660.1\|2586465_2586780_+	hypothetical protein	NA	NA	NA	NA
AXZ13661.1\|2586676_2587864_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	4.2e-120	52.2
AXZ13662.1\|2588040_2588931_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
AXZ13663.1\|2588930_2589923_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
AXZ13664.1\|2589924_2590734_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9
2599174:2599192	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2977773 : 2987247

Bacillus_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ14024.1\|2977773_2979495_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	6.9e-15	22.8
AXZ16065.1\|2979539_2980241_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
AXZ14025.1\|2980594_2980813_+	translation initiation factor IF-1	NA	NA	NA	NA
AXZ14026.1\|2980943_2983223_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
AXZ14027.1\|2983253_2983571_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
AXZ14028.1\|2983896_2984118_+	cold shock domain protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
AXZ14029.1\|2984051_2984255_-	hypothetical protein	NA	NA	NA	NA
AXZ14030.1\|2984194_2986135_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
AXZ14031.1\|2986131_2987247_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. CP032171

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 23448

Escherichia_phage(46.15%)

transposase,integrase

attL 970:985|attR 12755:12770

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AXZ16617.1\|877_1822_+	hypothetical protein	NA	NA	NA	NA
970:985	attL	NA	NA	NA	NA
AXZ16638.1\|1900_2251_+	hypothetical protein	NA	NA	NA	NA
AXZ16618.1\|2308_2830_+	hypothetical protein	NA	NA	NA	NA
AXZ16619.1\|2875_3079_+	hypothetical protein	NA	NA	NA	NA
AXZ16620.1\|3108_4113_+	hypothetical protein	NA	NA	NA	NA
AXZ16621.1\|4310_5090_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.4e-52	92.0
AXZ16622.1\|5147_5405_-	hypothetical protein	NA	NA	NA	NA
AXZ16623.1\|6182_7049_+	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
AXZ16624.1\|8087_9293_+	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
AXZ16625.1\|9289_10267_+	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	1.4e-86	53.5
AXZ16626.1\|11282_12038_-	hypothetical protein	U5N3V8	Enterobacteria_phage	3.8e-34	34.3
AXZ16627.1\|12034_13534_-\|transposase	IS21 family transposase	NA	NA	NA	NA
12755:12770	attR	NA	NA	NA	NA
AXZ16628.1\|13622_14384_-	hypothetical protein	A0A2K9L727	Tupanvirus	2.0e-06	24.1
AXZ16629.1\|14494_15418_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXZ16630.1\|15513_16437_+\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXZ16631.1\|16492_17827_+	amino acid permease	NA	NA	NA	NA
AXZ16632.1\|17871_19143_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
AXZ16633.1\|19380_21009_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.7e-127	45.1
AXZ16634.1\|21152_22076_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.2e-177	99.7
AXZ16635.1\|22162_22591_+	hypothetical protein	A0A286S298	Klebsiella_phage	2.5e-67	77.5
AXZ16636.1\|22577_23060_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	2.9e-56	68.4
AXZ16637.1\|23067_23448_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.2e-36	54.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032169

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032168

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. CP032167

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. CP032171

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection