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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032207 Klebsiella pneumoniae strain AR_0109 chromosome, complete genome 0 crisprs DEDDh,csa3,cas3,WYL,DinG,RT 0 0 8 0
CP032208 Klebsiella pneumoniae strain AR_0109 plasmid unnamed2, complete sequence 0 crisprs RT,DinG 0 0 2 0
CP032209 Klebsiella pneumoniae strain AR_0109 plasmid unnamed3, complete sequence 0 crisprs RT,csa3,cas3 0 0 1 0
CP032210 Klebsiella pneumoniae strain AR_0109 plasmid unnamed4, complete sequence 0 crisprs NA 0 0 0 0
CP032206 Klebsiella pneumoniae strain AR_0109 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0
CP032212 Klebsiella pneumoniae strain AR_0109 plasmid unnamed6, complete sequence 0 crisprs RT 0 0 3 0
CP032211 Klebsiella pneumoniae strain AR_0109 plasmid unnamed5, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. CP032207
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1421356 : 1490734 75 uncultured_Caudovirales_phage(61.11%) terminase,protease,tRNA,integrase,portal,head,capsid,tail attL 1457115:1457132|attR 1473110:1473127
DBSCAN-SWA_2 3034744 : 3046398 13 Enterobacteria_phage(70.0%) NA NA
DBSCAN-SWA_3 3697190 : 3734526 47 Salmonella_phage(84.62%) integrase,portal,head,capsid,plate,tail,lysis attL 3697098:3697116|attR 3734598:3734616
DBSCAN-SWA_4 3768942 : 3778406 9 Dickeya_phage(16.67%) protease,tRNA NA
DBSCAN-SWA_5 4145606 : 4186481 46 Enterobacteria_phage(21.05%) transposase,integrase,protease attL 4172878:4172937|attR 4178789:4179446
DBSCAN-SWA_6 4219414 : 4257879 56 uncultured_Caudovirales_phage(34.04%) terminase,head,tail,lysis NA
DBSCAN-SWA_7 4262555 : 4300265 56 uncultured_Caudovirales_phage(34.04%) terminase,head,tail,lysis NA
DBSCAN-SWA_8 4528460 : 4539347 9 Escherichia_phage(87.5%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP032208
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13350 : 119999 101 Stx2-converting_phage(22.22%) transposase NA
DBSCAN-SWA_2 201058 : 276874 83 Escherichia_phage(21.21%) tail,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP032212
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 62122 60 Escherichia_phage(33.33%) transposase,integrase attL 2124:2141|attR 9308:9325
DBSCAN-SWA_2 66046 : 66751 1 Escherichia_phage(100.0%) transposase NA
DBSCAN-SWA_3 70469 : 79562 12 Escherichia_phage(60.0%) transposase,integrase attL 73523:73582|attR 78806:79625
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. CP032209
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 68100 : 133072 58 uncultured_Caudovirales_phage(26.32%) protease,integrase,transposase attL 59843:59857|attR 79870:79884
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage