Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
AP018532 Oscillibacter sp. PEA192 DNA, complete genome 1 crisprs NA 0 6 0 0

Results visualization

1. AP018532
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
AP018532_1 1726651-1727418 Orphan NA:I-C
11 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
AP018532_1 1.3|1726818|33|AP018532|CRISPRCasFinder,CRT 1726818-1726850 33 NZ_CP033583 Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence 87186-87218 7 0.788
AP018532_1 1.4|1726884|33|AP018532|CRISPRCasFinder,CRT 1726884-1726916 33 NZ_CP033583 Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence 87186-87218 7 0.788
AP018532_1 1.2|1726751|34|AP018532|CRISPRCasFinder,CRT 1726751-1726784 34 NZ_LR134465 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence 21442-21475 9 0.735
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP026305 Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence 41546-41579 9 0.735
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP026305 Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence 49420-49453 9 0.735
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP029339 Streptomyces sp. SM17 plasmid pSM17A, complete sequence 122663-122696 9 0.735
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NC_010311 Streptomyces sp. HK1 plasmid pSHK1, complete sequence 47240-47273 9 0.735
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP026489 Streptomyces sp. 604F plasmid unnamed, complete sequence 67963-67996 9 0.735
AP018532_1 1.7|1727084|34|AP018532|CRISPRCasFinder,CRT 1727084-1727117 34 MH572442 Microviridae sp. isolate SD_MC_66, complete genome 2708-2741 10 0.706
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 NZ_KP763470 Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence 42905-42938 10 0.706
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP036260 Sporomusa termitida strain DSM 4440 plasmid pSPTER, complete sequence 72578-72611 10 0.706
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NC_009427 Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence 44392-44425 10 0.706
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NC_010333 Caulobacter sp. K31 plasmid pCAUL02, complete sequence 157379-157412 10 0.706
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972693 Salmonella phage SI23, complete genome 21396-21429 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972694 Salmonella phage SE22, complete genome 468-501 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972692 Salmonella phage SE21, complete genome 41620-41653 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 AP000400 Enterobacteria phage VT1-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7 53785-53818 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 NZ_CP019281 Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence 23987-24020 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK770415 Salmonella phage SF11, complete genome 200-233 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK770414 Salmonella phage SE16, complete genome 4096-4129 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 NC_011356 Enterobacteria phage YYZ-2008, complete prophage genome 2370-2403 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972686 Salmonella phage SF3, complete genome 23550-23583 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972685 Salmonella phage SE10, complete genome 24784-24817 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 FJ184280 Enterobacteria phage YYZ-2008, complete genome 2370-2403 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MK972687 Salmonella phage SE1 (in:P22virus), complete genome 15058-15091 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 MF807953 Escherichia phage Ayreon, complete genome 29421-29454 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 NC_009514 Phage cdtI DNA, complete genome 31016-31049 11 0.676
AP018532_1 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT 1727151-1727184 34 LR595862 Escherichia virus Lambda_2H10 genome assembly, chromosome: 1 29680-29713 11 0.676
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 240607-240640 11 0.676
AP018532_1 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT 1727285-1727318 34 NZ_CP043620 Rhodobacteraceae bacterium SH-1 plasmid p2, complete sequence 52685-52718 11 0.676

1. spacer 1.3|1726818|33|AP018532|CRISPRCasFinder,CRT matches to NZ_CP033583 (Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence) position: , mismatch: 7, identity: 0.788

aaagcggacggccacaccgtccacgactttgac	CRISPR spacer
gcagcggacggccacaccctccaccaccccgac	Protospacer
. **************** ***** **...***

2. spacer 1.4|1726884|33|AP018532|CRISPRCasFinder,CRT matches to NZ_CP033583 (Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence) position: , mismatch: 7, identity: 0.788

aaagcggacggccacaccgtccacgactttgac	CRISPR spacer
gcagcggacggccacaccctccaccaccccgac	Protospacer
. **************** ***** **...***

3. spacer 1.2|1726751|34|AP018532|CRISPRCasFinder,CRT matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.735

tcctcccacagcaccgccgtcccctccagcatgt	CRISPR spacer
gcgccgatcagcaccgccgtcccggccagcatgg	Protospacer
 * .*   ***************  ******** 

4. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP026305 (Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
tccgcggcggcgtcaacgacggcctgctcaccgc	Protospacer
*.*.************.*.*********  .* .

5. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP026305 (Streptomyces lunaelactis strain MM109 plasmid pSLUN1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
tccgcggcggcgtcaacgacggcctgctcgccgg	Protospacer
*.*.************.*.*********  .*  

6. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP029339 (Streptomyces sp. SM17 plasmid pSM17A, complete sequence) position: , mismatch: 9, identity: 0.735

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
tcggcctcggcctccatggcggcctgctgctcgc	Protospacer
*. .*  **** ** ***************** .

7. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 9, identity: 0.735

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
tcggcctcggcctccatggcggcctgctgctcgg	Protospacer
*. .*  **** ** *****************  

8. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP026489 (Streptomyces sp. 604F plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
tcggcctcggcctccatggcggcctgctgctcgg	Protospacer
*. .*  **** ** *****************  

9. spacer 1.7|1727084|34|AP018532|CRISPRCasFinder,CRT matches to MH572442 (Microviridae sp. isolate SD_MC_66, complete genome) position: , mismatch: 10, identity: 0.706

agctccgtctccagacggtgcaccagagcggaga	CRISPR spacer
tgtaccgtctccagacggtacaccacagttgccc	Protospacer
 *. ***************.***** **. *   

10. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to NZ_KP763470 (Salmonella enterica subsp. enterica serovar Typhimurium strain L946 plasmid pSTM_Phi, complete sequence) position: , mismatch: 10, identity: 0.706

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgtgtga	Protospacer
. ************ ** ******** .... **

11. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP036260 (Sporomusa termitida strain DSM 4440 plasmid pSPTER, complete sequence) position: , mismatch: 10, identity: 0.706

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
ttcacggcttcgtcaatggcggcctggcagatgc	Protospacer
********  **************** ..  . .

12. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NC_009427 (Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence) position: , mismatch: 10, identity: 0.706

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
gtcacggcggcgacaatcgcggcctcgtcgtaac	Protospacer
 *********** **** *******  *  *  .

13. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NC_010333 (Caulobacter sp. K31 plasmid pCAUL02, complete sequence) position: , mismatch: 10, identity: 0.706

ttcacggcggcgtcaatggcggcctgctgctctt-----	CRISPR spacer
ctgtcggcgccgtcaatggcggcct-----tctcgaaaa	Protospacer
.*  ***** ***************     ***.     

14. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

15. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

16. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

17. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to AP000400 (Enterobacteria phage VT1-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

18. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP019281 (Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

19. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

20. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

21. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to NC_011356 (Enterobacteria phage YYZ-2008, complete prophage genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

22. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

23. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

24. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to FJ184280 (Enterobacteria phage YYZ-2008, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

25. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

26. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to MF807953 (Escherichia phage Ayreon, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

27. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to NC_009514 (Phage cdtI DNA, complete genome) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

28. spacer 1.8|1727151|34|AP018532|CRISPRCasFinder,CRT matches to LR595862 (Escherichia virus Lambda_2H10 genome assembly, chromosome: 1) position: , mismatch: 11, identity: 0.676

cccggcggctccggaaggggcatccaccacaaga	CRISPR spacer
tgcggcggctccggtagcggcatccagtgggtta	Protospacer
. ************ ** ******** .. .  *

29. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 11, identity: 0.676

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
cctccggcggcgtcattggcagcctgcttagcac	Protospacer
... *********** ****.*******   * .

30. spacer 1.10|1727285|34|AP018532|CRISPRCasFinder,CRT matches to NZ_CP043620 (Rhodobacteraceae bacterium SH-1 plasmid p2, complete sequence) position: , mismatch: 11, identity: 0.676

ttcacggcggcgtcaatggcggcctgctgctctt	CRISPR spacer
ctgacggcgccgtcattggcggcctgcattagcc	Protospacer
.* ****** ***** ***********  .  ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage