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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP024909 Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUEC_L, complete sequence 1 crisprs DEDDh 0 1 1 0
CP024908 Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L chromosome, complete genome 1 crisprs DinG,DEDDh,cas3,csa3,WYL 0 0 10 0
CP024910 Enterobacter hormaechei subsp. xiangfangensis strain OSUKPC4_L plasmid pOSUKPC4, complete sequence 0 crisprs csa3 0 0 3 0

Results visualization

1. CP024909
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024909_1 40146-40235 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP024909_1 1.1|40170|42|CP024909|CRISPRCasFinder 40170-40211 42 NZ_CP030078 Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence 40190-40231 0 1.0
CP024909_1 1.1|40170|42|CP024909|CRISPRCasFinder 40170-40211 42 NZ_CP029247 Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence 40170-40211 0 1.0
CP024909_1 1.1|40170|42|CP024909|CRISPRCasFinder 40170-40211 42 NZ_KX015668 Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence 69193-69234 0 1.0

1. spacer 1.1|40170|42|CP024909|CRISPRCasFinder matches to NZ_CP030078 (Enterobacter hormaechei strain 20710 plasmid p4-20710, complete sequence) position: , mismatch: 0, identity: 1.0

gactctgcttttgtataagcctgtccagctggggtatagctc	CRISPR spacer
gactctgcttttgtataagcctgtccagctggggtatagctc	Protospacer
******************************************

2. spacer 1.1|40170|42|CP024909|CRISPRCasFinder matches to NZ_CP029247 (Enterobacter hormaechei subsp. xiangfangensis strain OSUVMCKPC4-2 plasmid pOSUEC_F, complete sequence) position: , mismatch: 0, identity: 1.0

gactctgcttttgtataagcctgtccagctggggtatagctc	CRISPR spacer
gactctgcttttgtataagcctgtccagctggggtatagctc	Protospacer
******************************************

3. spacer 1.1|40170|42|CP024909|CRISPRCasFinder matches to NZ_KX015668 (Enterobacter cloacae strain CY01 plasmid pCY-CTX, complete sequence) position: , mismatch: 0, identity: 1.0

gactctgcttttgtataagcctgtccagctggggtatagctc	CRISPR spacer
gactctgcttttgtataagcctgtccagctggggtatagctc	Protospacer
******************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 107660 127 Salmonella_phage(94.74%) integrase,protease,tail,capsid,terminase attL 1058:1080|attR 108283:108305
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP024908
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP024908_1 3385030-3385144 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 599299 : 672617 94 Salmonella_phage(49.41%) tRNA,portal,tail,plate,capsid,transposase,terminase,head,lysis,integrase attL 588582:588612|attR 678309:678339
DBSCAN-SWA_2 1029817 : 1130012 114 Escherichia_phage(20.59%) tRNA,portal,holin,tail,plate,capsid,terminase,head,protease,integrase attL 1097600:1097615|attR 1126332:1126347
DBSCAN-SWA_3 1614165 : 1623015 7 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_4 1724037 : 1744155 25 Pectobacterium_phage(33.33%) holin,integrase attL 1718427:1718442|attR 1753296:1753311
DBSCAN-SWA_5 1791630 : 1842642 64 Enterobacteria_phage(22.92%) tRNA,portal,holin,tail,capsid,terminase,head,protease,integrase attL 1789052:1789071|attR 1827485:1827504
DBSCAN-SWA_6 2058506 : 2113477 63 Escherichia_phage(23.08%) portal,holin,tail,plate,capsid,transposase,terminase,head,protease,integrase attL 2057208:2057222|attR 2100798:2100812
DBSCAN-SWA_7 2489790 : 2496798 8 Escherichia_phage(100.0%) integrase NA
DBSCAN-SWA_8 2673409 : 2714825 51 Escherichia_phage(29.73%) transposase,tail,tRNA,integrase attL 2675300:2675319|attR 2710064:2710083
DBSCAN-SWA_9 2771064 : 2830393 79 Enterobacterial_phage(32.69%) tRNA,portal,holin,tail,capsid,terminase,head,protease NA
DBSCAN-SWA_10 3449922 : 3499784 72 Salmonella_phage(25.4%) holin,tail,terminase,lysis,integrase attL 3449576:3449627|attR 3499793:3499844
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. CP024910
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 60352 : 104033 49 Acinetobacter_phage(16.67%) transposase,integrase attL 89633:89646|attR 107272:107285
DBSCAN-SWA_2 108949 : 146657 36 Escherichia_phage(37.5%) transposase NA
DBSCAN-SWA_3 191994 : 286074 94 uncultured_Caudovirales_phage(32.0%) transposase,protease,integrase attL 210879:210893|attR 226003:226017
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage