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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP028380 Escherichia coli O145 str. RM9872 plasmid pRM9872-1, complete sequence 0 crisprs NA 0 0 1 0
CP028379 Escherichia coli O145 str. RM9872 chromosome, complete genome 5 crisprs DinG,cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,PD-DExK 0 6 17 0

Results visualization

1. CP028380
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7322 : 81008 67 Stx2-converting_phage(46.15%) integrase,protease,transposase attL 41508:41522|attR 86631:86645

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP028379
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028379_1 2922305-2922436 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028379_2 3003637-3003762 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028379_4 3427904-3428057 Unclear I-E
2 spacers
cas2,cas1,cas6e,cas5,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028379_5 3452156-3452428 Unclear I-E
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP028379_6 5194679-5194828 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP024469 Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence 158925-158955 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026787 Shigella dysenteriae strain NCTC 9718 plasmid unnamed 74518-74548 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NC_007607 Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence 94031-94061 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NC_022899 Shigella dysenteriae 1617 plasmid pSLG231, complete sequence 91344-91374 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP017721 Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence 167541-167571 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026779 Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence 179378-179408 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 CP027674 Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence 102932-102962 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_MF156695 Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence 72327-72357 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026783 Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence 35573-35603 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026775 Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence 132210-132240 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026781 Shigella dysenteriae strain 53-3937 plasmid unnamed 50371-50401 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026879 Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence 63271-63301 3 0.903
CP028379_5 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT 3452186-3452216 31 NZ_CP026785 Shigella dysenteriae strain 80-547 plasmid unnamed 47954-47984 3 0.903
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194003-194046 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194096-194139 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194282-194325 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229083-229126 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229184-229227 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229285-229328 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204497-204540 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204590-204633 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204776-204819 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239577-239620 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239678-239721 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239779-239822 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195331-195374 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195424-195467 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195610-195653 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230489-230532 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230590-230633 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230691-230734 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176286-176329 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176379-176422 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176565-176608 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211459-211502 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211560-211603 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211661-211704 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14201-14244 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 51839-51882 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386513-386556 7 0.841
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 6864-6907 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 194189-194232 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229386-229429 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 204683-204726 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239880-239923 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 195517-195560 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230792-230835 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 176472-176515 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211762-211805 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7447-7490 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84271-84314 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 11516-11559 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 27999-28042 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 63894-63937 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MF374379 Escherichia phage DN1, complete genome 31163-31206 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 110186-110229 8 0.818
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MT230112 Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence 99-142 8 0.818
CP028379_5 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT 3452308-3452337 30 LC528882 Burkholderia phage FLC5 DNA, complete genome 8002-8031 8 0.733
CP028379_5 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT 3452308-3452337 30 HM461982 Burkholderia phage KS14, complete genome 5145-5174 8 0.733
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12164-12207 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 17899-17942 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211730-211773 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 211930-211973 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222224-222267 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 222424-222467 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213058-213101 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 213258-213301 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194013-194056 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 194213-194256 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 82847-82890 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 102549-102592 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 40381-40424 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 313597-313640 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MG065691 UNVERIFIED: Campylobacter phage A11a, complete genome 33059-33102 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27282-27325 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27381-27424 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MG065686 UNVERIFIED: Campylobacter phage A18a, complete genome 141021-141064 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 19394-19437 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NC_049343 Escherichia phage 500465-2, complete genome 31797-31840 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56036-56079 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053721 Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence 198909-198952 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 40305-40348 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP044299 Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence 91418-91461 9 0.795
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 103-146 9 0.795
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NZ_CP036488 Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence 265470-265500 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NC_017060 Rahnella aquatilis HX2 plasmid PRA1, complete sequence 337888-337918 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NC_015062 Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence 340710-340740 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NZ_CP034838 Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence 327465-327495 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NZ_CP034839 Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence 327465-327495 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NZ_CP034837 Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence 293141-293171 9 0.71
CP028379_5 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT 3452247-3452277 31 NZ_CP032297 Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence 301810-301840 9 0.71
CP028379_5 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT 3452308-3452337 30 NC_014390 Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence 116507-116536 9 0.7
CP028379_5 5.7|3452308|32|CP028379|PILER-CR 3452308-3452339 32 LC528882 Burkholderia phage FLC5 DNA, complete genome 8001-8032 9 0.719
CP028379_5 5.7|3452308|32|CP028379|PILER-CR 3452308-3452339 32 HM461982 Burkholderia phage KS14, complete genome 5144-5175 9 0.719
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4170-4213 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4169-4212 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4169-4212 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4169-4212 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14110-14153 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 27032-27075 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 397088-397131 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 404133-404176 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31304-31347 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27480-27523 10 0.773
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 115810-115853 10 0.773
CP028379_2 2.1|3003672|56|CP028379|CRISPRCasFinder 3003672-3003727 56 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12112-12167 13 0.768
CP028379_1 1.1|2922349|44|CP028379|CRISPRCasFinder 2922349-2922392 44 NZ_CP019906 Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence 17871-17914 14 0.682
CP028379_2 2.1|3003672|56|CP028379|CRISPRCasFinder 3003672-3003727 56 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87116-87171 17 0.696

1. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP024469 (Shigella dysenteriae strain BU53M1 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

2. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026787 (Shigella dysenteriae strain NCTC 9718 plasmid unnamed) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

3. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NC_007607 (Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

4. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NC_022899 (Shigella dysenteriae 1617 plasmid pSLG231, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

5. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP017721 (Salmonella enterica subsp. enterica serovar Minnesota strain CFSAN017963 plasmid pCFSAN017963_01, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaaggggtcctcttttgtgc	Protospacer
************** *** **********.*

6. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026779 (Shigella dysenteriae strain 69-3818 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

7. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to CP027674 (Escherichia coli strain 2014C-3003 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaacgggtcctcttttgtgc	Protospacer
**************.*** **********.*

8. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_MF156695 (Klebsiella pneumoniae strain 1642 plasmid p1642-1, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gagccctgccagaacgggtcctcttttgtgc	Protospacer
**************.*** **********.*

9. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026783 (Shigella dysenteriae strain 08-3380 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

10. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026775 (Shigella dysenteriae strain ATCC 13313 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

11. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026781 (Shigella dysenteriae strain 53-3937 plasmid unnamed) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

12. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026879 (Shigella dysenteriae strain 07-3308 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

13. spacer 5.1|3452186|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP026785 (Shigella dysenteriae strain 80-547 plasmid unnamed) position: , mismatch: 3, identity: 0.903 

gagccctgccagaatggggcctcttttgtac	CRISPR spacer
gaaccctgccagaacggggcctcttttgttc	Protospacer
**.***********.************** *

14. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

15. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

16. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

17. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

18. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

19. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

20. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

21. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

22. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

23. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

24. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

25. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

26. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

27. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

28. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

29. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

30. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

31. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

32. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
* .  .**********.**************************

33. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaa	Protospacer
. * . **********.**************************

34. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgag	Protospacer
. * . **********.**************************

35. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

36. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgga	Protospacer
. **. **********.*************************.

37. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. **. **********.*************************.

38. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacatt	Protospacer
 *.** **********.************************. .

39. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
  * ************.****.*******************.*

40. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.841 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacgcc	Protospacer
. *..***********.****.******************** *

41. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
*.    **********.************************.*

42. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

43. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

44. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

45. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

46. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

47. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

48. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgag	Protospacer
. * . **********.*****.********************

49. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacgga	Protospacer
. **. **********.****.********************.

50. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
. *.. **********.*************************..

51. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggt	Protospacer
. *.. **********.*************************..

52. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaac	Protospacer
  .   **********.************************.**

53. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgca	Protospacer
..*...**********.*************************

54. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 *.   **********.************************.*

55. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
* .  .**********.************************.*

56. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 *.   **********.************************.*

57. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 8, identity: 0.818 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
*.  * **********.****.*******************.*

58. spacer 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT matches to LC528882 (Burkholderia phage FLC5 DNA, complete genome) position: , mismatch: 8, identity: 0.733 

atgattgtcgattttttccgacaggatttt	CRISPR spacer
gctcgtgtcgatattttccgacaggctttc	Protospacer
..   ******* ************ ***.

59. spacer 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT matches to HM461982 (Burkholderia phage KS14, complete genome) position: , mismatch: 8, identity: 0.733 

atgattgtcgattttttccgacaggatttt	CRISPR spacer
gctcgtgtcgatcttttccgacaggctttc	Protospacer
..   *******.************ ***.

60. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gccgaacgccggatgcggcgtggacgccttatccggcctacata	Protospacer
 ***...*********.*****.******************.

61. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccggg--tgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
--cggacttgccggatgcggcgtaaacgccttatccggccacgaac	Protospacer
  ***.  **********.****.****************   .**

62. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

63. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

64. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

65. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

66. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

67. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

68. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

69. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgta	Protospacer
  .  .**********.*************************

70. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
 . ...**********.************************.*

71. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
  . ..**********.************************.*

72. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gctttttgccggatgcggcgtaaacgccttatccggcctacggt	Protospacer
 *.   **********.****.********************..

73. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
 * ...**********.****.*******************.*

74. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
 *    **********.************ ************..

75. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. *.. .*********.*************************.

76. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacggg	Protospacer
. *.. .*********.*************************.

77. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggt	Protospacer
 *    **********.************ ************..

78. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacgga	Protospacer
* .  .**********.*.***********************.

79. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtg	Protospacer
  .*  **********.******************.******

80. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
. * . **********.****.*******************.*

81. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
* .  .**********.*****************.******.*

82. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaa	Protospacer
* .  .**********.****.*******************.*

83. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaa	Protospacer
* .  .**********.*****************.******.*

84. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 9, identity: 0.795 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacgatcgccggatgcggcgtgaacgccttatccgtcctacggt	Protospacer
. **. .*********.****************** ******..

85. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

86. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

87. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

88. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

89. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

90. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

91. spacer 5.2|3452247|31|CP028379|CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.71 

atttactgattgtaccaggtaggaaaagatc	CRISPR spacer
gtttactgattgtatcagataggatttattt	Protospacer
.*************.***.*****   . *.

92. spacer 5.3|3452308|30|CP028379|CRISPRCasFinder,CRT matches to NC_014390 (Butyrivibrio proteoclasticus B316 plasmid pCY186, complete sequence) position: , mismatch: 9, identity: 0.7 

atgattgtcgattttttccgacaggatttt	CRISPR spacer
atgattgtcgactttttccgattacctcgc	Protospacer
***********.*********. .  *. .

93. spacer 5.7|3452308|32|CP028379|PILER-CR matches to LC528882 (Burkholderia phage FLC5 DNA, complete genome) position: , mismatch: 9, identity: 0.719 

catgattgtcgattttttccgacaggattttg	CRISPR spacer
tgctcgtgtcgatattttccgacaggctttcg	Protospacer
...   ******* ************ ***.*

94. spacer 5.7|3452308|32|CP028379|PILER-CR matches to HM461982 (Burkholderia phage KS14, complete genome) position: , mismatch: 9, identity: 0.719 

catgattgtcgattttttccgacaggattttg	CRISPR spacer
tgctcgtgtcgatcttttccgacaggctttcg	Protospacer
...   *******.************ ***.*

95. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

96. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

97. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

98. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

99. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
 ..*. **********.****.*******************. .

100. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cgttcataccggatgcggcgtgaacgccttatccggcctacaaa	Protospacer
. .  .*.********.************************.*

101. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctacatg	Protospacer
. *.. **********.****.*******************.

102. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacagg	Protospacer
*..   **********.****.*******************..

103. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatt	Protospacer
  *...**********.****.*******************. .

104. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaaccgccagatgcggcgtgaacgccttatccggcctacaaa	Protospacer
. *.. .***.*****.************************.*

105. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.773 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
cacaactgccggatgcggcgtgaacgccttatccgtcctaccgt	Protospacer
. *.. **********.****************** ***** ..

106. spacer 2.1|3003672|56|CP028379|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.768 

agttctaaccctgcgtaggcctgataagacgcgccagcgtcgcatcaggcaacggc	CRISPR spacer
catacgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccgaa	Protospacer
 .* * ..*  . ************************************** **.

107. spacer 1.1|2922349|44|CP028379|CRISPRCasFinder matches to NZ_CP019906 (Escherichia coli strain MDR_56 plasmid unnamed5, complete sequence) position: , mismatch: 14, identity: 0.682 

tccgggtgccggatgcagcgtgaacgccttatccggcctacgac	CRISPR spacer
catcatggccggatgcggcgttaacgccttatccggccacttag	Protospacer
. . .  *********.**** ****************  . *

108. spacer 2.1|3003672|56|CP028379|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 17, identity: 0.696 

--------agttctaaccctgcgtaggcctgataagacgcgccagcgtcgcatcaggcaa	CRISPR spacer
aagcgattgatttt--------gtaggcctgataagacgcggcagcgtcgcatcaggcat	Protospacer
        ..**.*        ******************* *****************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 558021 : 623730 66 Enterobacteria_phage(55.88%) transposase,tail,lysis,portal,terminase,integrase,head,capsid,tRNA,protease attL 592500:592546|attR 624153:624199
DBSCAN-SWA_2 836521 : 867463 43 Enterobacteria_phage(50.0%) transposase,tail,holin,lysis,portal,terminase,integrase,head,capsid attL 829861:829920|attR 838684:839374
DBSCAN-SWA_3 1087640 : 1149090 75 Enterobacteria_phage(42.22%) transposase,tail,holin,lysis,portal,integrase,terminase,head,capsid,protease attL 1102736:1102795|attR 1151320:1151384
DBSCAN-SWA_4 1390142 : 1461926 85 Stx2-converting_phage(32.0%) transposase,tail,holin,lysis,terminase,integrase,head,capsid,tRNA attL 1393300:1393315|attR 1467727:1467742
DBSCAN-SWA_5 1574875 : 1634508 61 Stx2-converting_phage(33.33%) transposase,tail,terminase,integrase,head,capsid,protease attL 1574712:1574739|attR 1618665:1618692
DBSCAN-SWA_6 1718114 : 1783423 83 Escherichia_phage(46.48%) transposase,tail,holin,lysis,portal,integrase,terminase,head,capsid,tRNA attL 1717748:1717763|attR 1737957:1737972
DBSCAN-SWA_7 1914892 : 2031305 125 Escherichia_phage(35.94%) transposase,tail,holin,lysis,portal,terminase,head,capsid,protease NA
DBSCAN-SWA_8 2164860 : 2212599 60 Enterobacteria_phage(76.6%) tail,holin,portal,plate,integrase,terminase,capsid,tRNA attL 2167263:2167287|attR 2205241:2205265
DBSCAN-SWA_9 2322543 : 2418234 104 Escherichia_phage(36.07%) tail,holin,lysis,portal,terminase,tRNA,protease NA
DBSCAN-SWA_10 2489989 : 2587182 110 Enterobacteria_phage(32.2%) transposase,tail,holin,portal,plate,integrase,terminase,head,capsid attL 2550964:2551023|attR 2585927:2587236
DBSCAN-SWA_11 2739933 : 2827632 85 Enterobacteria_phage(40.0%) transposase,tail,holin,lysis,terminase,head,capsid,tRNA NA
DBSCAN-SWA_12 3313002 : 3323918 10 Stx2-converting_phage(50.0%) tail NA
DBSCAN-SWA_13 3618473 : 3629062 13 Enterobacteria_phage(88.89%) NA NA
DBSCAN-SWA_14 4411232 : 4421623 11 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_15 4691683 : 4757989 77 Escherichia_phage(33.33%) tail,holin,lysis,portal,plate,integrase,terminase,head,capsid,tRNA attL 4724682:4724728|attR 4758100:4758146
DBSCAN-SWA_16 5009090 : 5069896 55 Enterobacteria_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_17 5321238 : 5353685 31 Enterobacteria_phage(71.43%) transposase,tail,portal,terminase,integrase attL 5320440:5320454|attR 5333370:5333384

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage