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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032393 Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 chromosome, complete genome 0 crisprs cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG 0 0 11 0
CP032394 Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence 0 crisprs NA 0 0 0 0
CP032395 Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_1, complete sequence 0 crisprs DEDDh 0 0 1 0

Results visualization

1. CP032393
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1752148 : 1817921 64 Salmonella_phage(87.8%) tail,integrase,transposase,tRNA,plate,lysis,portal,head,capsid attL 1755185:1755200|attR 1768452:1768467
DBSCAN-SWA_2 2081048 : 2087087 6 Salmonella_virus(50.0%) NA NA
DBSCAN-SWA_3 2323305 : 2332476 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_4 2399672 : 2408839 9 Enterobacteria_phage(42.86%) NA NA
DBSCAN-SWA_5 2523106 : 2569316 63 Salmonella_phage(84.62%) tail,holin,integrase,transposase,terminase,plate,head,capsid attL 2521078:2521092|attR 2541397:2541411
DBSCAN-SWA_6 3262460 : 3360994 108 Enterobacteria_phage(24.0%) tail,holin,integrase,terminase,protease,tRNA,portal,lysis attL 3292243:3292258|attR 3360995:3361159
DBSCAN-SWA_7 3463092 : 3472800 12 Burkholderia_phage(28.57%) NA NA
DBSCAN-SWA_8 3557719 : 3601681 45 Escherichia_phage(33.33%) tail,protease NA
DBSCAN-SWA_9 3608623 : 3634257 32 Salmonella_phage(72.41%) holin,terminase NA
DBSCAN-SWA_10 3705223 : 3712536 7 Ralstonia_phage(16.67%) integrase,protease attL 3700279:3700293|attR 3711272:3711286
DBSCAN-SWA_11 4050009 : 4095646 68 Salmonella_phage(71.64%) tail,holin,integrase,coat,terminase,protease,portal,lysis attL 4049676:4049716|attR 4095664:4095704
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP032395
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 13898 : 115609 112 Escherichia_phage(21.74%) head,integrase,transposase,tail attL 59685:59698|attR 113324:114144
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage