CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP032400	Streptococcus iniae strain YM011 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,cas9,cas1,cas2,csn2,csm6	0	8	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP032400_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032400_1

232119-232260

Orphan

Consensus_repeat	Method
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of CP032400_1

>merge|CP032400|1|232119-232260|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAAACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTGGGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

>CP032400|1|1|232119-232260|CRISPRCasFinder
GGCAAAGTTAACTCTTATTGTTTTAGCAATAAAACTATAAGAA	ACCTTTATTCTTAGGCGCGTTTACAGTTTTAAGCTCGCCCTTAAAAATGCCCACTG
GGCAAAGTTAACTCTTATTGTTTTAGCTATAAAACTATAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
CP032400.1\|AYB02972.1\|239980_243217_-\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
CP032400.1\|AYB02957.1\|221635_222946_-\|DUF2142-domain-containing-protein	unknown	unknown	gnl\|CDD\|370749
CP032400.1\|AYB02971.1\|236336_239984_-\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
CP032400.1\|AYB02969.1\|235381_235759_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|376605
CP032400.1\|AYB02968.1\|233441_235253_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
CP032400.1\|AYB02965.1\|230661_231516_-\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
CP032400.1\|AYB02966.1\|231609_231948_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
CP032400.1\|AYB02958.1\|222981_223962_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
CP032400.1\|AYB02960.1\|225207_226473_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
CP032400.1\|AYB02963.1\|228467_229400_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
CP032400.1\|AYB02962.1\|227658_228465_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
CP032400.1\|AYB02976.1\|246087_246468_-\|OsmC-family-peroxiredoxin	unknown	unknown	gnl\|CDD\|376823
CP032400.1\|AYB02973.1\|243380_244304_+\|neutral-zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|282131
CP032400.1\|AYB02974.1\|244334_245006_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
CP032400.1\|AYB02961.1\|226492_227659_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
CP032400.1\|AYB02975.1\|245014_246085_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
CP032400.1\|AYB02970.1\|236026_236233_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
CP032400.1\|AYB02959.1\|223954_225181_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340831
CP032400.1\|AYB02967.1\|232323_233433_-\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
CP032400.1\|AYB02964.1\|229389_230544_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340858

Protein	Function_ID	Function_description	E-value
CP032400.1\|AYB02972.1\|239980_243217_-\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
CP032400.1\|AYB02957.1\|221635_222946_-\|DUF2142-domain-containing-protein	gnl\|CDD\|370749	pfam09913, DUF2142, Predicted membrane protein (DUF2142). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.00632e-42
CP032400.1\|AYB02971.1\|236336_239984_-\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
CP032400.1\|AYB02969.1\|235381_235759_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	1.06476e-42
CP032400.1\|AYB02968.1\|233441_235253_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
CP032400.1\|AYB02965.1\|230661_231516_-\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.41324e-132
CP032400.1\|AYB02966.1\|231609_231948_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	2.41323e-41
CP032400.1\|AYB02958.1\|222981_223962_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.20376e-17
CP032400.1\|AYB02960.1\|225207_226473_-\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	2.18249e-07
CP032400.1\|AYB02963.1\|228467_229400_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.81505e-85
CP032400.1\|AYB02962.1\|227658_228465_-\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.62687e-49
CP032400.1\|AYB02976.1\|246087_246468_-\|OsmC-family-peroxiredoxin	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	0.000232849
CP032400.1\|AYB02973.1\|243380_244304_+\|neutral-zinc-metallopeptidase	gnl\|CDD\|282131	pfam04228, Zn_peptidase, Putative neutral zinc metallopeptidase. Members of this family have a predicted zinc binding motif characteristic of neutral zinc metallopeptidases (Prosite:PDOC00129).	4.49769e-145
CP032400.1\|AYB02974.1\|244334_245006_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.96473e-94
CP032400.1\|AYB02961.1\|226492_227659_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.06265e-114
CP032400.1\|AYB02975.1\|245014_246085_-\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	8.71601e-09
CP032400.1\|AYB02970.1\|236026_236233_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.51434e-12
CP032400.1\|AYB02959.1\|223954_225181_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	7.57125e-10
CP032400.1\|AYB02967.1\|232323_233433_-\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
CP032400.1\|AYB02964.1\|229389_230544_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340858	cd04955, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea.	0

>CP032400.1|AYB02966.1|231609_231948_-|metal-sulfur-cluster-assembly-factor
MTEQKKYSDQEVSKIKDRILEALEMVIDPELGIDIVNLGLIYEIRFEATGHTEIDMTLTTMGCPLADLLTDQIYDVLKEIPEVTSSEVKLVWYPAWTVEKMSRYARIALGIR
>CP032400.1|AYB02965.1|230661_231516_-|dTDP-4-dehydrorhamnose-reductase
MILITGSNGQLGTELRYLLDERNEDYVAVDVAEMDITNSEKVDDVFAQVKPTLVYHCAAYTAVDAAEDEGKALNQAINVDGTENIAKACQKHQATLVYISTDYVFDGKKPLGQEWLETDIPNPQTEYGRTKRLGEEAVEKYTDKFYIIRTAWVFGNYGKNFVFTMQNLAKSHDILTVVNDQHGRPTWTRTLAEFMCHLAENKKEFGYYHLSNDAKEDTTWYDFAKEILKDTTVDVKPVDSSAFAAKAKRPLNSTMNLDKAKATGFVIPTWQDALGEFYKQEVKK
>CP032400.1|AYB02964.1|229389_230544_-|glycosyltransferase-family-1-protein
MRDVFIIGSRGLPAQYGGFETFVEELINHQVSHDITYHVACLSDEKGKKDSNYKGARCFYIAPPKLGPARVIAYDMLAIKKALTYIVQHDIKNPIFYILGNTIGAFMSPFVKAIKKRNGLFFINPDGLEWKRSKWSKPVQTYLKFSEKKMCQLADLVISDNIGIEAYLNQNYKSAKTTFIAYGTETGKSQLAFEDESVRNYFYQNKLSEKDYYLVLGRFVPENNYETIIREFMLSKTSRDLVIITNHQGNPYFEKLRTITLCDKDPRIKFVGTVYDKELLIYIRENAFAYIHGHEVGGTNPGLLEALAHTNLNLVFGVDFNKSVAQTAALYWTKTANDLAQLIESVDQRSHYEDLGKEAKRIIEEEYTWKKIVGEYEALFLNEN
>CP032400.1|AYB02963.1|228467_229400_-|glycosyltransferase-family-2-protein
MKINILMSTYNGEKFLAQQIESIQKQTVKDWNLLIRDDGSTDRTPQIIQEFAKTDSRIRFINPNNRQNFGVVKNFHTLVKFEEADFYFFSDQDDVWLEDKLALTLAESDRYELKKPLLIYTDLKIVNQKLEVTNDSMIKTQSHHANTSLVEELTENTVTGGTMMINHALAKEWTVTENLLMHDWYLALLASGLGNLVYLDHPTELYRQHDSNVLGARTWSKRMKNWIRPHKLIDKYWWLITSSQKQAKLLLDHDLSTKDYDMVQDYVTLLDKNLKQRIITLKKYGFKKNRAFHTLVFSSLIITKFGYRRQ
>CP032400.1|AYB02962.1|227658_228465_-|ABC-transporter-permease
MNFLTVKNRILLREMVRTDFKLRYQGSFIGHLWSILKPMLLFTIMYLVFVRFLKFDDGTPHYAVSLLLGMVTWNFFTEATNMGMLSIVSRGDLLRKINFPKEIIVISSVVGASINYFINIIVVFAFALINGVKPSFGILILLPLFIELFLFAAGVAFILATLFVKYRDMGPIWEVMLQAGMYSTPIIYSITYIIQRGHLSIAKVMMMNPLAQIIQELRHFIVYSGATINWDIFDNKLFTLIPIIISVGSFIVGYTVFKRNAKKFAEIL
>CP032400.1|AYB02961.1|226492_227659_-|ABC-transporter-ATP-binding-protein
MSEKKVVLSVDSVSKSFKLPTEASHSLRTSLVNYFKGIKGYTEQHVLDNVSFEVEEGDFFGIVGRNGSGKSTLLKIISKIYDPEKGKVTVDGKLVPFIELGVGFNPELTGRENVYMNGALLGFSREEVEAMYNDIVAFAELHEFMDQKLKNYSSGMQVRLAFSIAIKAKGDILILDEVLAVGDEAFQRKCFDYFAQLKRDNKTVILVTHSMEQVQRFCNKAMLIDKGHQVEAGTPLEISQIYKQLNGLDVAKESNKKTENNGISLSSQFFNRDNKTLDFNFEVHFEDIIEDPVLTFTIHKDTGELLYRWVSDEEIDGQLEVSNAKISIDFAIQNIYPNGKFTTEFGVKSRDRSKEYAMFSGICDFELINRGKSGNNIYWKPETKVNLH
>CP032400.1|AYB02960.1|225207_226473_-|glycosyltransferase
MYKGKRFLLTHIWLRGFSGAEINILELATYLKKEGAKVEVFTFLASSPMIEEFQKRDISVIDDINYPFDINCYDVIFSAQNIIPSAIVNALGKKQEKCPKFIFIHMAALKEHVLEQPYIYGLEEKLSSATLAISEEIVQKNLKRFFKGIPNLQYYPNPVPEEYALQVHEQKTAPESILVISNHPPKEVMGIKTLLNAKGIKVDFFGVWSDHYQLVSPDLIAGYDCVIGIGKNVQYCLAMGKPIYVYDHFKGPGYLTAENIEQAAFNNFSGRGFEKCRKTSQEIVSDLLAGYQSAQSFQKKHIEEYRNRYTISNNMSRIFSSLESSDHPIDLLEKQDIEYINAINLLIQSKIVGLENDVANLWEGIHRLESIEKQMKSEREDLLQQLEAKNQELASINASRMFKFCQVLWKVKAFIFPNKTH
>CP032400.1|AYB02959.1|223954_225181_-|glycosyltransferase-family-1-protein
MITKIIRSYKDEGGRATLRKIRHRLQGGSHQQEAGKIDLNRIPIMPQLEDIAKADYINNPYQKPSKISKEKLNIAWVSPPVGKGGGGHTTISRFVKYLQSKGHHITFYIYHNNTIDQSPKEAQEIFSKAYGIDVKVDRLEEFKNQDLVFATSWETAYAVFNLQGENLHKFYFVQDFEPIFYGVGSRYKLAEATYKFGFYGVTAGKWLTHKLKDYQMDADFFDFGADTDIYKPKQVLKKKKKIAFYARAHTERRGFELGVMALKIFKDKHPEYDIEFFGQDMSNYDIPFDFIDRGILNKEELADIYHESVACLVLSLTNVSLLPLELLVAGCIPVMNSGDNNTMVLGDNDDIAYAEAYPVALAEELCKAVERANIDDYANEISQKYDTISWEASYQKVEEIIRREVIND
>CP032400.1|AYB02958.1|222981_223962_-|glycosyltransferase-family-2-protein
MTDKLKATVFIPVYNGENDHLEETLTALYAQKTDFLWDLIITNSESKDNSVAIIEKFAEKYGNLKLIQLKKSDYSHGATRQMAAQESSAEYMVYLSQDAVPANDNWLSEMVKPFEFNDKIVAVLGKQKPRLSCFPAMKYDINAVFNEQGVADALTIWTRDDENLKGKYTKESFYSDVCSAAPRDFLVNQIGYRHVAYSEDYEYGKDILDAGFMKAYNSQAVVEHSNDILLSEYKSRIFDETYNVRLNSGVTTKISMVTVLRQAAKASVKDAMNIISDKDYSWKRKLYWLAINPLFHLEKWRGMRLANQVDLTSEQSKYSLEKRKEI
>CP032400.1|AYB02957.1|221635_222946_-|DUF2142-domain-containing-protein
MKVEKMYLLLASLLISLSILIMPVTQVPDERVHAHFAWDIVYQEKPQKHTWLQGTGIENKQPADKAINFKGYQKFFTQKIDFSKEKTRLKFSIVNIRHIPQLIGMVIGKMIYPSAGVIITAGRITNAFIYILAIYYLIKYIKVGKYTLMFISLLPMMIHQAGSLSYDVLNFVAIASFFVCYINLMIDKKVTWKKLFGYLLLIILLYAVKPNNLLLFPLIGFINFRFEGPYINKLNPILEFWQRNRLKIVVLLTLLCLIVLTFVLSKRTSVLHFIHMIFNTLFVNNLNPDLNNVLTTGVFGFFGMLVIQMPAWVIWLNIFVLTIVFLQEAQSHLNDVTTKEVGISSFIMVLLQVVVIIITMYFAWTPKMLGENANISVGAQGRYFTPFLLYLFPLFMSLKNYFNFYLNKKLFVPLVLGTIVFNYVIYNILIMLYYWV
>CP032400.1|AYB02967.1|232323_233433_-|RNA-polymerase-sigma-factor-RpoD
MAKENEITTFNVQVADFIRNHKKEGSAVDDEITEKLVIPFVLDADQIDDLLERLTDGGISITDKEGNPSAKYIVEEPKPEELTDEQLIGSNSAKVNDPVRMYLKEIGVVPLLSSDEEKELAVAVAEGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKQLRDFIED
>CP032400.1|AYB02968.1|233441_235253_-|DNA-primase
MGLLWGGDDLAIDKEMISQIKNSVNIVDLIGEVVGLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVAEKSGIAIDLAPQRQYENPRASAHQELIRIHEDAQKFYHAVLMTTTQGQLAREYLYQRGLDDSLIDHFRIGLAPDESDYLYQTLSKKYSEESLLTSGLFNLSERNNLVYDAFRQRIMFPLTNERGDTIAFSGRIWTENDTEQKLAKYKNSRATVLFNKSYEFYHLDKAKPIITKKHEVYLMEGFMDVIAAYRAGAENAIASMGTALTPEHVKHLKKLTKKVILTYDGDNAGQNAIAKSLDLLTDLQVEIVRIPNQMDPDEFIQQNSAEALSDLLSHSRISSTEFLIEYLKPGNMDNLQSQIAYVEKIAKIIAASPSITAQNSYINRVADLLPDFDYLQVEQTVNSYRIQDRQNRQGQIPQVQTALVGLPVNKSVTALIKAENHLLHRLIHHDYLLNEFRNKEDFYFDTQELQSLYNLLKESGEISPYDLSQMNPQVSQAYYRVLEENLPDEVADSEINDILVKRNRLISERDILKQGKQVRESSNKGDHQLALEVLENLIAQKRNME
>CP032400.1|AYB02969.1|235381_235759_+|large-conductance-mechanosensitive-channel-protein-MscL
MIKELKEFLFKGNVLDLAVAVVIGAAFKTIIDSLVADVITPLIGLLFGAPDFSSIKLFNAILIGNFINAVVNFLIVGTVLFFVVKAANKAMSFNKKEEIEEEVIAGPTQEELLVQIRDLLAKKEA
>CP032400.1|AYB02970.1|236026_236233_-|30S-ribosomal-protein-S21
MLHYLEEVKSMSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSEAARKRKKF
>CP032400.1|AYB02971.1|236336_239984_-|helicase-exonuclease-AddAB-subunit-AddA
MNFEPFLDAKAIIALQEAEMASDKVQKRTAEQIEAIYSHGQNILVSASAGSGKTFVMVERIIDKIMRGVAIDRMFISTFTVKAATELKERLEKKLIEAIKSQHNPDVKHYLSEQLHHLDQADIGTMDAFTQKLVSQYGYSLGISPKYRIMQEKSEQDILKTEVFDKLFESYMQKHQGIFIALVQNFSGKAKTANSFKQLVYQIHQFCQSTDNPKKWLAQNFLKGVHHYQGFADYPKEELELFLECMQKTAAALQDITDLEDYKQVTAKGSETKAYQKHKQMIASLYEFSTHFETMYGFAKISQLAQDLTALLPSGQSVTVAGQKYPVFKDLQNHLEGLRHLDIIFQYQGESLPLLELLQAFIADFSEAYLQAKMAENAFEFSDIAHFAISILEGNEAVRLAYQEHYHEVMVDEYQDNNHMQERLLELLSTGQNRFMVGDIKQSIYRFRQADPQIFNAKFKDYQENPQHGQLIILKENFRSQSEVLDVTNAIFTHLMDEAVGDILYDGNHQLLAGSDRQKEEHPENKCQFLIYNTDLADDSDESTTLEESESDGISPWQVKLLVKEIIKLHTEEGVPFSDITLLVSSRTRNDTIFQAFNHYGIPLVADGGQTNYLKSVEVMLMLDTLRTINNPLNDYALVALMRSLMFGFDEDQLARIALQGSNSGKIDSFYEKLCNCLKGEGEHPELISSDFKMELEQFHNTLDSWRHFAKSHSLYDLIWKIFNDRFYYDLVATSPKAEQAQANLYALALRSSQFEKTGFKGLSRFIRMIDKILETQNDLVDVEIDQPKNAVNLMTIHKSKGLEFKYVFILNCDKRFSMTDLHSPLILDREMGIGIKYIADVKEQVEAQHLNSLKVSLETLPYQLNKNRLKRATLSEQMRLLYVAMTRAKKKLYLIGKGSQQKAQDAFSGQRTGNHLSQELRESLTTFQDWILAISENFKEDLHFDLVYVSDKDLTANQIGRLSKESFLNQKDNQKDNRQTLEIARAIDMLDKVSELNQLYDAAIHLPTVRTPSQLKKYYEPLMDNDGVDVIDKQTYSQKTYKLPNFSKSKVVESSQIGSALHELMQRITVSDKVSMREIKDALALVSADDSVKEKIDLKKILAFFQETDLGQKIQAKRAFLHREAPFAMLKKDPKSQEKFVVRGIIDGYLLFDDRIVLFDYKTDRYSTSLDMVNRYSMQMELYAQALKQAYRINKIEKYLVLMGGQTIEVVAVD
>CP032400.1|AYB02972.1|239980_243217_-|ATP-dependent-nuclease-subunit-B
MRLLYTDISQSLTEILVNQAASFAKSGYRVFYIAPNSLSFEKERAVLEHLEEEASFAITVTRFTQMARYFTINSKRSGKTLTDNALTMFFYRALLLIAPKDLSIYGPLKRDLTFIKQLVDLYKELKTSNISILDLHLDNEERKNDLIAIFAMVSDLIRQDQFEDQTPLAYFAQAICSRELEKELSKTVVVIDGFTRFTAEEDYLVSLLNDKCHQVVIGTYISQKAFQKSFVKGNVYQASIEFMGQLSKDYHCKAEFMSSSMVYPETFSKLSRLFEAKNDFSELDIVLEEDDKSAIAIWQNPNQKEEIEHVAKAIRQKLYEGYRYKDILVLLGDVEAYQLQIGPIFDKYDIPYYFGKSESMSHHPLVHFMESLERSKRYNWRREDIINLLKSGLFGHFENTSIDQFEYYLDYADINGFTKFSRPFSINPKGKQDLPIFHLESLNHLRKQLFDPLATLFKSQQQLGKSLMKKLVFFFETIDLTGNFQQLSEEESENDREKNDEVWKVFISILEEFQLIFAEEKLSLDDALSLLKVAMQAAEYRAVPATLDVVTVTSYDLVQAHSNAFVYALGLTQTHFPKHSKNSSLISDDERLMTNDRQDQFHRLEIASYENGKKNHYTALSLFNAATKELVLSQPSLINEMSDHSSPYLLDLIHFGVPLIEKGKNQFSNRETDIGHYKSLLSQLIDINRQALDQEFSPEDNNFWTVMLRYLKKRLKENKISFQEQKNHLQTKKLAPEVLARRFPEDKPLSLSSSALSVFYNNQYKYYLQYVLGLEEKGSIHPDARQHGTYLHKVFEVIMSDHSAASFDAKVQKAIEEVNQETSFKTFYQQDAQGEFSLRQLEAIVKSTARILDLSQSIKVLKQEDHFKIALGKELLINGTIDRIDQLPDASVGIVDYKSSAQAFEIDQFYNGLSPQLVTYLTALKDNNPDGKLFGAMYLHMQDPKFDLKKYKQLDEKVLTDFYSEMTYKGIFLETEKEYLSNGLYKTSKNLYSEQEIDLLIQFNKHLYYKALEQIKSGHFLINPYSKDGRSVQGDQLKAITGFESDLDLGQARLLVKGSSNEKRQEFLSLMEKEVRSK
>CP032400.1|AYB02973.1|243380_244304_+|neutral-zinc-metallopeptidase
MKTDDLRESQNVEDRRGQASSSYNGSSGSSGGGMLLQLLFSRGGWKTKLIIVIIMLVMGGGGLSGVLTGEQSSPSNNSYQSTKINRTKGDKASQEQVTFVSKVFASTEDYWTKTFQEQGLTYKKPTLVLYTGTTQTACGQGQAAAGPFYCSADKKVYLDISFYDELTHKYGASGDFAMAYVIAHEVGHHIQNEIGTMSKYAQARQGKSQTQANQLNVQLELQADYYAGAWAKYVQGQNLLEKGDIDEAMTAAHAVGDDKLQKEAYGRVVPDSFTHGSSEQRQRWFNKGFEYGDFDHGNTFSIPYSDL
>CP032400.1|AYB02974.1|244334_245006_-|ABC-transporter-ATP-binding-protein
MERILQFIGVSKTFQDGNQKIQALKATDFTIEAGQFVAVIGPSGSGKSTFLTLAGGLQTPTKGQIIINGSDYTQLPEKERAKRRFEDIGFILQTSNLIPFLTAEQQLELVDRLSQKRNHDQKQTLFKELEISHLAKKFPKDISGGERQRLAIARALYNNPALILADEPTASLDTKRAHEVVSLLLKECREKNKAIIMVTHDQRMIEECDYVYYMEDGVLRKHH
>CP032400.1|AYB02975.1|245014_246085_-|ABC-transporter-permease
MFLALNEMKEAKLKYSLITGLLLLIAYLMFFLSGLANGLVQENKSAIDYWKADLVFLAKDANATLNLSQIPKDKKKQIDAAKITSLQQFNTVAWTKVKPNEEDKQKVSLFGIEANSFLLPPLLKGRTLKGQNEALIDKSLADKSGFELGDHIQFLNQDKTVKIVGITNKATFNVSPVIYMSQETFKPFMRPSKTGDMLVNAFIVQGKVDNYPKSDFQKLSLESFITKLPGYNAQVLTFAFMIGFLILISAIIISIFMYVLTIQKAPIFGIMKAQGISNKVIANALLTQTFLLSIIGSSAGWLLTGLTALLLPKAVPFQGNLGLDSLIFTSLILCALLGTLFSVLATVRIDPLKAIG
>CP032400.1|AYB02976.1|246087_246468_-|OsmC-family-peroxiredoxin
MYHHHIYGDRLFHTRSNGYGTSVELFGSTENGETPMSLMNIALASCVTMCVQSFWKHTFGDNQARIETSIDYEEGGFYLNVTLPALLTQHLENALRDFVAQKCRVKQLLAKDVTVVIDFHYHSKGA

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Crispr_ID: CP032400_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032400_2

1968295-1969254

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	PILER-CR

14 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of CP032400_2

>merge|CP032400|2|1968295-1969254|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACAGATAGTTGGTATTTAACTAATCCGTCAATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTTTACTACGTTCTGAAGCGTTTATCGGATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTATACCACTAAAAAACCACTGCGGGACAGGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAAATAGATCCCAATATTCTAAGTCGTAAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTGTCAGTCTGTGATTGCTTAATCCCTCCTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCCTCACCATCAGGCAAAGACCTTGATACCTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACGTGTTCGCCGAATAAGTAGAATTAAGAAGCGTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAACCCTGCAAAAGATTCATATGCGATTAGTTATGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCAAGTCTTGCAACAACAAGTATCCACTACAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACATATATATCAATGGAAATACCAAAACGTTTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAATTCCTTGGTTGTCAGTGTAATAGATAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACCGGTTTAGCTGCTCTTGAGAAGATTGTATTGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTTAGTATTAAATATAATATCAACACCTTTAGTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAACTACAACAGTACCTATAAGTGTGGCTACACCGTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>CP032400|2|2|1968295-1969254|CRISPRCasFinder
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AGATAGTTGGTATTTAACTAATCCGTCAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTTTACTACGTTCTGAAGCGTTTATCGGAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTATACCACTAAAAAACCACTGCGGGACAG
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAAATAGATCCCAATATTCTAAGTCGTAA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTGTCAGTCTGTGATTGCTTAATCCCTCCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CCTCACCATCAGGCAAAGACCTTGATACCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>CP032400|2|1|1968295-1969254|CRT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	AGATAGTTGGTATTTAACTAATCCGTCAAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTTTACTACGTTCTGAAGCGTTTATCGGAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTATACCACTAAAAAACCACTGCGGGACAG
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAAATAGATCCCAATATTCTAAGTCGTAA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTGTCAGTCTGTGATTGCTTAATCCCTCCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CCTCACCATCAGGCAAAGACCTTGATACCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TACAACAGTACCTATAAGTGTGGCTACACC
GTTTTAGAGCTGTGTTTTTTTGTGTGTTTCTTTAAG

>CP032400|2|1|1968493-1969188|PILER-CR
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAAATAGATCCCAATATTCTAAGTCGTAA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTGTCAGTCTGTGATTGCTTAATCCCTCCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CCTCACCATCAGGCAAAGACCTTGATACCT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	GTGTTCGCCGAATAAGTAGAATTAAGAAGC
GTTTTAGAGCTGTGTTATTTTGAATGCTCCCAAAAC	CCTGCAAAAGATTCATATGCGATTAGTTAT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CAAGTCTTGCAACAACAAGTATCCACTACA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	ATATATATCAATGGAAATACCAAAACGTTT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAATTCCTTGGTTGTCAGTGTAATAGATA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	CGGTTTAGCTGCTCTTGAGAAGATTGTATT
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	TTAGTATTAAATATAATATCAACACCTTTA
GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032400.1\|AYB04450.1\|1966329_1967196_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
CP032400.1\|AYB04458.1\|1975428_1976274_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381297
CP032400.1\|AYB04448.1\|1961792_1962008_+\|hypothetical-protein	unknown	unknown	unknown
CP032400.1\|AYB04446.1\|1960333_1961101_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
CP032400.1\|AYB04444.1\|1958441_1959572_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
CP032400.1\|AYB04455.1\|1972841_1973498_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
CP032400.1\|AYB04459.1\|1976382_1977402_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
CP032400.1\|AYB04454.1\|1970452_1972285_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
CP032400.1\|AYB04447.1\|1961097_1961739_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
CP032400.1\|AYB04451.1\|1967526_1968189_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
CP032400.1\|AYB04453.1\|1969821_1970073_-\|hypothetical-protein	unknown	unknown	unknown
CP032400.1\|AYB04613.1\|1967207_1967537_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
CP032400.1\|AYB04456.1\|1973517_1973982_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP032400.1\|AYB04452.1\|1969350_1969773_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
CP032400.1\|AYB04460.1\|1977585_1978203_+\|hypothetical-protein	unknown	unknown	unknown
CP032400.1\|AYB04457.1\|1974221_1975346_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
CP032400.1\|AYB04445.1\|1959589_1960324_+\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|366738
CP032400.1\|AYB04614.1\|1972395_1972839_+\|peptide-methionine-(R)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|234692
CP032400.1\|AYB04443.1\|1957742_1958399_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
CP032400.1\|AYB04449.1\|1962223_1966330_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044

Protein	Function_ID	Function_description	E-value
CP032400.1\|AYB04450.1\|1966329_1967196_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	5.9174e-124
CP032400.1\|AYB04458.1\|1975428_1976274_+\|aldo/keto-reductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	1.60721e-102
CP032400.1\|AYB04446.1\|1960333_1961101_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.46549e-126
CP032400.1\|AYB04444.1\|1958441_1959572_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
CP032400.1\|AYB04455.1\|1972841_1973498_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	1.07784e-28
CP032400.1\|AYB04459.1\|1976382_1977402_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.79923e-94
CP032400.1\|AYB04454.1\|1970452_1972285_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
CP032400.1\|AYB04447.1\|1961097_1961739_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	5.18321e-54
CP032400.1\|AYB04451.1\|1967526_1968189_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	9.43095e-113
CP032400.1\|AYB04613.1\|1967207_1967537_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	9.99497e-47
CP032400.1\|AYB04456.1\|1973517_1973982_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.56994e-17
CP032400.1\|AYB04452.1\|1969350_1969773_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.77313e-69
CP032400.1\|AYB04457.1\|1974221_1975346_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.66775e-79
CP032400.1\|AYB04445.1\|1959589_1960324_+\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	4.71812e-76
CP032400.1\|AYB04614.1\|1972395_1972839_+\|peptide-methionine-(R)-S-oxide-reductase	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.68939e-84
CP032400.1\|AYB04443.1\|1957742_1958399_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.21858e-10
CP032400.1\|AYB04449.1\|1962223_1966330_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0

>CP032400.1|AYB04451.1|1967526_1968189_+|type-II-A-CRISPR-associated-protein-Csn2
MKLNFPVFDEPITIEKGTILVIENRTVFSSCAKHFCQYSEEDDLKLFDEKFKSIKESEVMLVTDILGYDVNAPSLLKLVHSDLETQLSDKPEVKSMIEKLAATITELIAYECLENELDLEYDEITVLELIKALGVKIETQSDTFFEKCLEIVQIFKYLTKKKLLVFINSGAYFTRDEFEKLLEYISLSSQPVLFLEPRKMYDFPQYVLDEDLFMLTENMV
>CP032400.1|AYB04613.1|1967207_1967537_+|CRISPR-associated-endonuclease-Cas2
MRMILMFDMPTDTSEERKAYRKFRTFLLSEGFIMHQFSVYSKLLLNNSANTAMIDRLQENNPKSGNITLLTVTEKQFARMIYLNGNRDTCIANSDDRIVFLGEEYKDET
>CP032400.1|AYB04450.1|1966329_1967196_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRTVIVNTHSKLSYKSNHLIYKDASRTEMIHLSEIDILLLETTDIVLSTMLIKRLIDENILVIFCDDKRLPTALLAPYYGRHDSSLQLSKQISWPEDLRAEVWTKIIAQKILNQSMYLGSCGFYEKSQSIIDLYNGLEIFDPTNREGHSARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFARELVVCGCMTQFGLKHSNQFNHFNFASDIMEPFRIIVDKIVYENRNKSFIQIKRYLFSIFSETYLYNNKEMYLSNIVSDYTKKVVKSLNNEGKGVPEFRV
>CP032400.1|AYB04449.1|1962223_1966330_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MRKPYSIGLDIGTNSVGWAVITDDYKVPSKKMRIQGTTDRTSIKKNLIGALLFDNGETAEATRLKRTTRRRYTRRKYRIKELQKIFSSEMNELDIAFFPRLSESFLVSDDKEFENHPIFGNLKDEITYHNDYPTIYHLRQTLADSDQKADLRLIYLALAHIIKFRGHFLIEGNLDSENTDVHVLFLNLVNIYNNLFEEDIVETASIDAEKILTSKTSKSRRLENLIAEIPNQKRNMLFGNLVSLALGLTPNFKTNFELLEDAKLQISKDSYEEDLDNLLAQIGDQYADLFIAAKKLSDAILLSDIITVKGASTKAPLSASMVQRYEEHQQDLALLKNLVKKQIPEKYKEIFDNKEKNGYAGYIDGKTSQEEFYKYIKPILLKLDGTEKLISKLEREDFLRKQRTFDNGSIPHQIHLNELKAIIRRQEKFYPFLKENQKKIEKLFTFKIPYYVGPLANGQSSFAWLKRQSNESITPWNFEEVVDQEASARAFIERMTNFDTYLPEEKVLPKHSPLYEMFMVYNELTKVKYQTEGMKRPVFLSSEDKEEIVNLLFKKERKVTVKQLKEEYFSKMKCFHTVTILGVEDRFNASLGTYHDLLKIFKDKAFLDDEANQDILEEIVWTLTLFEDQAMIERRLVKYADVFEKSVLKKLKKRHYTGWGRLSQKLINGIKDKQTGKTILGFLKDDGVANRNFMQLINDSSLDFAKIIKNEQEKTIKNESLEETIANLAGSPAIKKGILQSIKIVDEIVKIMGQNPDNIVIEMARENQSTMQGIKNSRQRLRKLEEVHKNTGSKILKEYNVSNTQLQSDRLYLYLLQDGKDMYTGKELDYDNLSQYDIDHIIPQSFIKDNSIDNTVLTTQASNRGKSDNVPNIETVNKMKSFWYKQLKSGAISQRKFDHLTKAERGALSDFDKAGFIKRQLVETRQITKHVAQILDSRFNSNLTEDSKSNRNVKIITLKSKMVSDFRKDFGFYKLREVNDYHHAQDAYLNAVVGTALLKKYPKLEAEFVYGDYKHYDLAKLMIQPDSSLGKATTRMFFYSNLMNFFKKEIKLADDTIFTRPQIEVNTETGEIVWDKVKDMQTIRKVMSYPQVNIVMKTEVQTGGFSKESIWPKGDSDKLIARKKSWDPKKYGGFDSPIIAYSVLVVAKIAKGKTQKLKTIKELVGIKIMEQDEFEKDPIAFLEKKGYQDIQTSSIIKLPKYSLFELENGRKRLLASAKELQKGNELALPNKYVKFLYLASHYTKFTGKEEDREKKRSYVESHLYYFDEIMQIIVEYSNRYILADSNLIKIQNLYKEKDNFSIEEQAINMLNLFTFTDLGAPSAFKFFNGDIDRKRYSSTNEIINSTLIYQSPTGLYETRIDLSKLGGK
>CP032400.1|AYB04448.1|1961792_1962008_+|hypothetical-protein
MNEIWKIKKHRIGVHFFKLITDKPYFNLLCCFEWFQQNNNIISLLKCQGKTKQNSSKTIIQLAYILAEILK
>CP032400.1|AYB04447.1|1961097_1961739_+|TIGR01906-family-membrane-protein
MREKCRVIGLWLWLLSFAVLATIYLAWLSYPLEIDFLGIDKVVYMTKASILCHFNGLMSYLTNPFHQTLTFASFLSSKDGLAHFQDVKILFHVTQAIFVLLAFPSLKFLKTTIQKQLMPLYQNAFLSAAVCPVLIASFAFMIGFEQFFILFHKILFAGKSNWTFNPLTDPVIWILPESFFRHCFIAFFILYELAFWTLYSISKKQENNKKQTT
>CP032400.1|AYB04446.1|1960333_1961101_+|TIGR01457-family-HAD-type-hydrolase
MKYKGYLIDLDGTIYMGKDPIPAGKAFIESLQAKELPYLLVTNNTTRTPEMIQEMLLKQFNIETPLKSIYTATMATVDYMNDMNRGKTAYVIGETGLKSAISAAGYQEDKETPAYVVVGLDTQLTYDMLATATLAIEKGALFIGTNPDLNIPTERGLLPGAGTLVALLEAATRVKPVFIGKPNAIIMNKALEILDIKRQDALMVGDNYLTDIMAGIQNDIATLLVTTGFTKPEEVATLPIQPDYVLKSLDEWDFK
>CP032400.1|AYB04445.1|1959589_1960324_+|acyl-[acyl-carrier-protein]-thioesterase
MGLKYREQLRLSFDLCDVKCDVKLPLLLAYCMIISGKQSQQLGRSDAYVLDTYRFVWIITDHEFSFERIPKLHETITIETEALSYNKYFCYRQFTFFDQEGEKIGCLVTHFALMDFDTRKVAPIPEELVAIYQSEFSKKLRRTPRMQALQEAVEKDYNVRYYDIDLNGHVNNSKYLEWMYDVMGFAFLQSHRPKHIQVKYLKEVAPGGTVSSRYHLEDLKSYHEITSENAMNAQAIITWETITE
>CP032400.1|AYB04444.1|1958441_1959572_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPSSAYIHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIAEFRYYDVKKLRTLYIGGGTPTSITASQLDYLLTELSRELDLQMLEEFTIEANPGDLSPDKIEVLKASAVNRISLGVQTFNDKHLKQIGRSHNEAQIYSTISALKEAGFHNISIDLIYALPGQTLEQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIIREMEANGFEHYEISNFSKPGFYSQHNLMYWNNDEYYGCGAGASGYLNGVRYRNRVPIQHYLKAVADGDARLSEEILSQKEMMEEEMFLGLRKKTGVSVTAFEEKFKCSFQELYGAVVSQLQEEGLLVNDDKVIRMTKKGLFLGDNVAEKFILE
>CP032400.1|AYB04443.1|1957742_1958399_+|GNAT-family-N-acetyltransferase
MNQNQQDFEQGLDSPCHKLFTEMIPEFQEGYLSYVFQTEKKDIQKRRIKNINKSFHRLITEPSFYLMPLSQESAEEIANKWHYQPPYDFYDMTADIEDYKEILSADKRGDHYFQVLRNGVLFGFVGFFKRHDQLEIVLGMKPDYVGKGYGRAFFQAIEDYAKLQFAAKCHVLKVADFNKRAKHLYCQMGYKGVTVYNQKTNGSAYPFVRMEKWFSEKE
>CP032400.1|AYB04452.1|1969350_1969773_+|nucleoside-diphosphate-kinase
MEKTFFMIKPDGVKRGLIGQVLERIERRGFVIEKLELRQADAAILRKHYDFLVDKPFFPEIEAYMTSGPLLIGVLSGNRVVSSWRMMMGVTNPKDALPGTIRGDFGQAPGDDGGIQNVVHGSDSIDAARREIDIWFASQE
>CP032400.1|AYB04453.1|1969821_1970073_-|hypothetical-protein
MKDLSSLTAKKKIVDGVQLDMFEGRQNKNNTSGYKGVYKHYKGYVARICVKGVHHRGVTRKTKEEAYQDRLALERKFLPRLDS
>CP032400.1|AYB04454.1|1970452_1972285_+|elongation-factor-4
MNSQELKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYKAKDGETYILHLIDTPGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVEKPLQALIFDSAYDAYRGVILQVRIINGIVKPGDKIQMMSNGKTFDVTEVGIFTPKTVGREFLATGDVGYIAASIKTVADTRVGDTVTLANNPAQEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVMTTDGQMLEVSNPSEFPDPTKVDHIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNAEKVDALSFIVHKEFAYERGKLIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDEDSKK
>CP032400.1|AYB04614.1|1972395_1972839_+|peptide-methionine-(R)-S-oxide-reductase
MIDKEKLRQTIGDLAYKVTQEAATEPAFTGEYDHFFEKGIYVDVVDGQVLFSSDDKYQSGCGWPAFTKPIDNRQVTNHQDNSYGMRRVEIKSRQAQSHLGHVFNDGPKEEGGLRYCINSAALRFIPYEQMAKEGYGEWLSLFDGKKE
>CP032400.1|AYB04455.1|1972841_1973498_+|HD-domain-containing-protein
MLSPKEKDILAAAEKWVSQKLADDASGHDWWHIVRVRNTAVTIAQKENANLFICQLAALLHDMTDEKLHQDRVKAEKDLKNWLEQQSLAASQKQQIRDIIESISFKAGHGKPAESIEAKVVQDADRLDAIGAIGIARCMAYSGHKGRLIHDPNRKARQNLSVDDYRNGKDTAIMHFYEKLLQLKDLMNTEYGYFLAQQRHAFLESYLEEFYAEWDGLR
>CP032400.1|AYB04456.1|1973517_1973982_+|GNAT-family-N-acetyltransferase
MIRLATRHDIPELLLLLEEIRRHHQTVRPDLFRADGGKFDAKELELLLYNPNKPIYVYTDDHDKVLGHLFLQFKVSESPVRIPRKVLYVEDLCVNAHYRGQGIGRQLMAFAKDFAREKGCYQVTLNVWNANKEAYAFYERLGFVPQQTQMERNL
>CP032400.1|AYB04457.1|1974221_1975346_+|DUF2974-domain-containing-protein
MPLNELDIAAINEIGYLSFDDLVEESVDASGVFDLSKMLVNDKDDTKASVYNFLITKERVALFCAIRDSKRFNDLSLSHYVNEVDPEFEKQFAAMVFTIPEINHTQMIFRGTDDSLIGWKEDFKLTYMKEVAANRSALSYLNAYLMNHPNKELVLSGHSKGGHLALYAAAFLASDLQEQLTVIYLLDSPGLAEEFLQREGYRAIRKRLRVIRPQESVVGVMLYCDVKPRIVKSASFGLLQHKTCNWQVSLDGQFEQATQASHLSKTLELVFKDWTKQLSKRDLKLVCDSLFDALISSGITSLNAFTLNDKAFVTFFQIIGSLHSLDQSKKSIIMKSVQQLIIDYTGYRKREVTEKIQLTLSKYLKKTKAKSKGE
>CP032400.1|AYB04458.1|1975428_1976274_+|aldo/keto-reductase
MIERLKLNNGLAIPALGLNTWLVENARAESLVSQALKLGYRHIDTAQAYGNEVGVGKGLFISGLPREEIYVASKMTAEHQNYELAVASIDDSLRKLGLDYLDLMLVHCSQVGSGNASTHKVANHLEVWRALEDAHSAGKIKSIGLSCFLMDDLKTIEKHARIKPAVNQILTHIGNTPLELISYCQQKAIVLEAYSPIVYEQALQSPEIKEMANHYHVTPAQLCIQYVLQLGMVALPKTENPQHMISNQQLDFKISKKDMAILKALDFKVDGNNSQEEVFYS
>CP032400.1|AYB04459.1|1976382_1977402_+|putative-sulfate-exporter-family-transporter
MKSINEKIPGILICLAIALPSWLLGHYLPLIGAPVFAILSGMLCAMFYQKREKSQAGISFTSKYILQFAVVLLGFGLNLKQIMSVGLESLPIILSTIATSLLVAYCLQKKLKLDINTATLVGVGSSICGGSAIAATAPVIDAKEDEIAKAISVIFLFNILAALLFPSLGQLLGLSNHGFAIFAGTAVNDTSSVTATAASWDALHHSNTLDGATIVKLTRTLAIIPITLFLSYYKAKHAKESTRGQEFSLKKAFPTFIIFFLLASLVTSLASVFGLPMAIFDSLKVLSKFFIVMAMAAIGLNSNLPKLIKTGGQAIFLGAICWLSITLVSLVMQLMMGTW
>CP032400.1|AYB04460.1|1977585_1978203_+|hypothetical-protein
MRKFLQDLETEVSHYLELALSFILTVAMIFFAISLISDLAGFMSSRIDNNNLFELVLGRAMSLAVGVELIKMLSKPSPGTVIEVLLFAITRQLIVDHPNMTDFLLGIIAVAVLFAVRRYLFIQFDDASRMIIRASHKIKMVNIIAHVKIKAEKDDTLRSFMTRKLEEDEQTISVGSIVYLKNVALRVEKMHGESISRVEVIRGIY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032400_2	2.3\|1968463\|30\|CP032400\|CRISPRCasFinder,CRT	1968463-1968492	30	MK448723	Streptococcus phage Javan271, complete genome	4416-4445	0	1.0
CP032400_2	2.4\|1968529\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968529-1968558	30	MK448894	Streptococcus phage Javan272, complete genome	10384-10413	0	1.0
CP032400_2	2.5\|1968595\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968595-1968624	30	MK448746	Streptococcus phage Javan383, complete genome	14632-14661	0	1.0
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	NC_028666	Streptococcus phage Str-PAP-1, complete genome	22920-22949	1	0.967
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_024214	Lactococcus phage P162, complete genome	53210-53239	1	0.967
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_024215	Lactococcus phage P078, complete genome	52079-52108	2	0.933
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_024208	Lactococcus phage P118, complete genome	51800-51829	2	0.933
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_024203	Lactococcus phage P092, complete genome	51140-51169	2	0.933
CP032400_2	2.6\|1968661\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968661-1968690	30	MK448887	Streptococcus phage Javan258, complete genome	37766-37795	5	0.833
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	NZ_CP045608	Bacillus cereus strain SB1 plasmid p2, complete sequence	89439-89468	5	0.833
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	NZ_AP017611	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence	80906-80935	6	0.8
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	NZ_CP051729	Escherichia coli strain SCU-111 plasmid pSCU-111-2, complete sequence	12178-12207	6	0.8
CP032400_2	2.9\|1968859\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968859-1968888	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	887525-887554	6	0.8
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	NZ_LR134432	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23	2056-2085	6	0.8
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	92331-92360	6	0.8
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	81923-81952	6	0.8
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	33576-33605	6	0.8
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	AP014355	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, * SEQUENCING IN PROGRESS *	2647-2676	6	0.8
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	352234-352263	7	0.767
CP032400_2	2.6\|1968661\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968661-1968690	30	MN855587	Siphoviridae sp. isolate 137, complete genome	2435-2464	7	0.767
CP032400_2	2.6\|1968661\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968661-1968690	30	KX397365	Erwinia phage vB_EamM_Caitlin, complete genome	106422-106451	7	0.767
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	AP011616	Thermus phage phiYS40 DNA, complete genome	61410-61439	7	0.767
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	DQ997624	Thermus thermophilus phage YS40, complete genome	61411-61440	7	0.767
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	NC_015937	Thermus phage TMA, complete genome	61209-61238	7	0.767
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	NC_008584	Thermus phage phiYS40, complete genome	61411-61440	7	0.767
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	AP011617	Thermus phage TMA DNA, complete genome	61209-61238	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP045792	Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence	21070-21099	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP023547	Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence	3254-3283	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP040242	Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence	7980-8009	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_022656	Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence	25353-25382	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	CP013736	Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence	23646-23675	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP017867	Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence	14281-14310	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP017880	Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence	19495-19524	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP017874	Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence	21449-21478	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_MH634990	Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence	9178-9207	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	18573-18602	7	0.767
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	MT774393	CrAssphage cr127_1, complete genome	59253-59282	7	0.767
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	MN871447	UNVERIFIED: Serratia phage KpLz_1_41, complete genome	61890-61919	8	0.733
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	MN871449	UNVERIFIED: Serratia phage KpXa_1, complete genome	196063-196092	8	0.733
CP032400_2	2.2\|1968397\|30\|CP032400\|CRISPRCasFinder,CRT	1968397-1968426	30	MN694139	Marine virus AFVG_250M1132, complete genome	8025-8054	8	0.733
CP032400_2	2.6\|1968661\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968661-1968690	30	MN693543	Marine virus AFVG_25M469, complete genome	15879-15908	8	0.733
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	64886-64915	8	0.733
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	MN693959	Marine virus AFVG_250M1110, complete genome	36135-36164	8	0.733
CP032400_2	2.3\|1968463\|30\|CP032400\|CRISPRCasFinder,CRT	1968463-1968492	30	MK448829	Streptococcus phage Javan7, complete genome	3865-3894	9	0.7
CP032400_2	2.3\|1968463\|30\|CP032400\|CRISPRCasFinder,CRT	1968463-1968492	30	MH853355	Streptococcus phage LF1, complete genome	32143-32172	9	0.7
CP032400_2	2.3\|1968463\|30\|CP032400\|CRISPRCasFinder,CRT	1968463-1968492	30	MH853358	Streptococcus phage LF4, complete genome	32143-32172	9	0.7
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	110744-110773	9	0.7
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	MT708547	Klebsiella phage Muenster, complete genome	232419-232448	9	0.7
CP032400_2	2.10\|1968925\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1968925-1968954	30	AB897757	Klebsiella phage K64-1 DNA, complete genome	110689-110718	9	0.7
CP032400_2	2.13\|1969123\|30\|CP032400\|CRISPRCasFinder,CRT,PILER-CR	1969123-1969152	30	NC_010183	Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence	32766-32795	9	0.7

1. spacer 2.3|1968463|30|CP032400|CRISPRCasFinder,CRT matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 0, identity: 1.0

ttataccactaaaaaaccactgcgggacag	CRISPR spacer
ttataccactaaaaaaccactgcgggacag	Protospacer
******************************

2. spacer 2.4|1968529|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MK448894 (Streptococcus phage Javan272, complete genome) position: , mismatch: 0, identity: 1.0

ttaaatagatcccaatattctaagtcgtaa	CRISPR spacer
ttaaatagatcccaatattctaagtcgtaa	Protospacer
******************************

3. spacer 2.5|1968595|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MK448746 (Streptococcus phage Javan383, complete genome) position: , mismatch: 0, identity: 1.0

ttgtcagtctgtgattgcttaatccctcct	CRISPR spacer
ttgtcagtctgtgattgcttaatccctcct	Protospacer
******************************

4. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to NC_028666 (Streptococcus phage Str-PAP-1, complete genome) position: , mismatch: 1, identity: 0.967

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
ttttactacgttctgaagcgtttattggat	Protospacer
*************************.****

5. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_024214 (Lactococcus phage P162, complete genome) position: , mismatch: 1, identity: 0.967

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattaaatataacatcaacaccttta	Protospacer
****************.*************

6. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_024215 (Lactococcus phage P078, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

7. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_024208 (Lactococcus phage P118, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

8. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_024203 (Lactococcus phage P092, complete genome) position: , mismatch: 2, identity: 0.933

ttagtattaaatataatatcaacaccttta	CRISPR spacer
ttagtattgaatataacatcaacaccttta	Protospacer
********.*******.*************

9. spacer 2.6|1968661|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MK448887 (Streptococcus phage Javan258, complete genome) position: , mismatch: 5, identity: 0.833

cctcaccatcaggcaaagaccttgatacct	CRISPR spacer
caagcccatcaggcaaaaaccttgatacct	Protospacer
*    ************.************

10. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.833

atatatatcaatggaaataccaa-aacgttt	CRISPR spacer
atatatatctatcgaaataccaataacatc-	Protospacer
********* ** ********** ***.*.

11. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 6, identity: 0.8

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
tcttcaaacattctgaagcgtttatccgat	Protospacer
*.**   **.**************** ***

12. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to NZ_CP051729 (Escherichia coli strain SCU-111 plasmid pSCU-111-2, complete sequence) position: , mismatch: 6, identity: 0.8

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
tcttcaaacattctgaagcgtttatccgat	Protospacer
*.**   **.**************** ***

13. spacer 2.9|1968859|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 6, identity: 0.8

caagtcttgcaacaacaagtatccactaca----	CRISPR spacer
caagacttgcaacaacaagt----actagattat	Protospacer
**** ***************    **** *

14. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134432 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 23) position: , mismatch: 6, identity: 0.8

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
atcaatttccatggaaataccaaaacgggt	Protospacer
**  ** ** *****************  *

15. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

16. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta----	CRISPR spacer
ttagtattaaatttaatatcaa----ttgaaaga	Protospacer
************ *********    ** *

17. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 6, identity: 0.8

ttagtattaaatataatatcaacaccttta	CRISPR spacer
tttaatttaaatataatatcaccaacttta	Protospacer
** .  *************** ** *****

18. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to AP014355 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S39-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

----ttagtattaaatataatatcaacaccttta	CRISPR spacer
aattttggt----aagataatatcaacaccttta	Protospacer
    **.**    ** ******************

19. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 7, identity: 0.767

--ttttactacgttctgaagcgtttatcggat	CRISPR spacer
ggcgtaatt--gttcttaagcgtttatcggat	Protospacer
  . * *.*  ***** ***************

20. spacer 2.6|1968661|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MN855587 (Siphoviridae sp. isolate 137, complete genome) position: , mismatch: 7, identity: 0.767

cctcaccatcaggcaaagaccttgatacct	CRISPR spacer
gcaaaccatctggctaagaccttgatagtt	Protospacer
 *  ****** *** ************ .*

21. spacer 2.6|1968661|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to KX397365 (Erwinia phage vB_EamM_Caitlin, complete genome) position: , mismatch: 7, identity: 0.767

cctcaccatcaggcaaagaccttgatacct	CRISPR spacer
gctccccatcagggaaagaccttgttcgat	Protospacer
 *** ******** ********** *   *

22. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to AP011616 (Thermus phage phiYS40 DNA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

23. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to DQ997624 (Thermus thermophilus phage YS40, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

24. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_015937 (Thermus phage TMA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacaact	Protospacer
  ***************.**.*****. .*

25. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_008584 (Thermus phage phiYS40, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacagct	Protospacer
  ***************.**.*****. .*

26. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to AP011617 (Thermus phage TMA DNA, complete genome) position: , mismatch: 7, identity: 0.767

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
taatatatcaatggaaacactaaaacaact	Protospacer
  ***************.**.*****. .*

27. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045792 (Campylobacter coli strain CFSAN032805 plasmid p2CFSAN032805, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

28. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023547 (Campylobacter coli strain CFSAN032805 plasmid pCFSAN032805_2, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

29. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040242 (Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

30. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_022656 (Campylobacter coli 15-537360 plasmid pCC42yr, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

31. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to CP013736 (Campylobacter coli strain OR12 plasmid pOR12CC42, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

32. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017867 (Campylobacter coli strain YF2105 plasmid pCCDM105S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

33. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017880 (Campylobacter coli strain BG2108 plasmid pCCDM108S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

34. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017874 (Campylobacter coli strain WA333 plasmid pCCDM33S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

35. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH634990 (Campylobacter coli strain XK3140 plasmid pCCDM140S, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

36. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagtaataaatataatatccacactatga	Protospacer
  **** ************* ****. * *

37. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 7, identity: 0.767

ttagtattaaatataatatc-aacaccttta	CRISPR spacer
atagtattaaatataatattaaatataatt-	Protospacer
 ******************. **.*.  **

38. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to MN871447 (UNVERIFIED: Serratia phage KpLz_1_41, complete genome) position: , mismatch: 8, identity: 0.733

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
aattactacgttctgtagcgttaatcaaca	Protospacer
  ************* ****** ***..

39. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to MN871449 (UNVERIFIED: Serratia phage KpXa_1, complete genome) position: , mismatch: 8, identity: 0.733

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
aattactacgttctgtagcgttaatcaaca	Protospacer
  ************* ****** ***..

40. spacer 2.2|1968397|30|CP032400|CRISPRCasFinder,CRT matches to MN694139 (Marine virus AFVG_250M1132, complete genome) position: , mismatch: 8, identity: 0.733

ttttactacgttctgaagcgtttatcggat	CRISPR spacer
ttttgctacgttctgatgcgttttcgccac	Protospacer
****.*********** ****** .   *.

41. spacer 2.6|1968661|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MN693543 (Marine virus AFVG_25M469, complete genome) position: , mismatch: 8, identity: 0.733

cctcaccatcaggcaaagaccttgatacct	CRISPR spacer
tgcatccatcaggctacgaccttgatacat	Protospacer
. .  ********* * *********** *

42. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
aaagaattaaatataatatcaacaaccaac	Protospacer
  ** ******************* *.

43. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MN693959 (Marine virus AFVG_250M1110, complete genome) position: , mismatch: 8, identity: 0.733

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gacatattatatataatatcaaaacctaaa	Protospacer
   .***** ************ ****  *

44. spacer 2.3|1968463|30|CP032400|CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 9, identity: 0.7

ttataccactaaaaaaccactgcgggacag	CRISPR spacer
gataacaacaaaaaaaccactgcgggaaca	Protospacer
    ** ** *****************  .

45. spacer 2.3|1968463|30|CP032400|CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 9, identity: 0.7

ttataccactaaaaaaccactgcgggacag	CRISPR spacer
gataacaacaaaaaaaccactgcgggaaca	Protospacer
    ** ** *****************  .

46. spacer 2.3|1968463|30|CP032400|CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 9, identity: 0.7

ttataccactaaaaaaccactgcgggacag	CRISPR spacer
gataacaacaaaaaaaccactgcgggaaca	Protospacer
    ** ** *****************  .

47. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

48. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

49. spacer 2.10|1968925|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

atatatatcaatggaaataccaaaacgttt	CRISPR spacer
gaagatataaatggaaataccaaaagtagg	Protospacer
. * **** ****************

50. spacer 2.13|1969123|30|CP032400|CRISPRCasFinder,CRT,PILER-CR matches to NC_010183 (Bacillus mycoides KBAB4 plasmid pBWB404, complete sequence) position: , mismatch: 9, identity: 0.7

ttagtattaaatataatatcaacaccttta	CRISPR spacer
gggaaattaaaaataatatcgacaccttag	Protospacer
  .. ****** ********.******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7370 : 63230

Staphylococcus_phage(25.0%)

tRNA,bacteriocin,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB02755.1\|7370_7547_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
AYB02756.1\|8113_8458_+	YtxH domain-containing protein	NA	NA	NA	NA
AYB02757.1\|8463_9933_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.1e-210	74.7
AYB02758.1\|10203_11106_-	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
AYB02759.1\|11181_11832_-	hemolysin III family protein	NA	NA	NA	NA
AYB02760.1\|11828_12278_-	DUF1836 domain-containing protein	NA	NA	NA	NA
AYB02761.1\|12626_13913_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
AYB02762.1\|13909_14749_+	alpha/beta hydrolase	NA	NA	NA	NA
AYB02763.1\|15218_16073_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
AYB02764.1\|16056_16842_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	4.4e-25	38.6
AYB02765.1\|16854_17403_+	sugar O-acetyltransferase	NA	NA	NA	NA
AYB02766.1\|17468_18314_+	DNA-protecting protein DprA	NA	NA	NA	NA
AYB02767.1\|18410_20546_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	6.4e-103	36.5
AYB02768.1\|20639_21524_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYB02769.1\|21689_22748_+	PTS transporter subunit IIC	NA	NA	NA	NA
AYB02770.1\|22766_23759_+	lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.3e-39	33.4
AYB02771.1\|23864_24530_+	DNA-binding protein	NA	NA	NA	NA
AYB02772.1\|25372_26707_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
AYB02773.1\|26845_27331_-	hypothetical protein	NA	NA	NA	NA
AYB02774.1\|27542_28718_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB02775.1\|28851_29604_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-30	36.3
AYB02776.1\|29605_31561_+	ABC transporter permease	NA	NA	NA	NA
AYB02777.1\|31603_32269_+	DNA-binding response regulator	NA	NA	NA	NA
AYB02778.1\|33213_33549_+	DNA replication protein DnaC	NA	NA	NA	NA
AYB02779.1\|33637_34708_-	tyrosine recombinase XerS	NA	NA	NA	NA
AYB02780.1\|34921_35545_-	hypothetical protein	NA	NA	NA	NA
AYB02781.1\|35932_37108_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB02782.1\|37132_38389_-	serine/threonine protein kinase	A0A1S5V1U4	Saudi_moumouvirus	1.6e-08	25.4
AYB02783.1\|38402_39176_-	hypothetical protein	NA	NA	NA	NA
AYB02784.1\|39921_41097_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB02785.1\|41224_42457_+	peptidoglycan bridge formation glycyltransferase FemA/FemB family protein	NA	NA	NA	NA
AYB02786.1\|42481_42919_-	threonine/serine exporter	NA	NA	NA	NA
AYB02787.1\|42909_43692_-	threonine/serine exporter	NA	NA	NA	NA
AYB02788.1\|43878_44301_-	cupin domain-containing protein	Q2I8C5	Bacillus_phage	1.1e-38	61.8
AYB02789.1\|44424_45453_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYB02790.1\|45623_46316_+	XRE family transcriptional regulator	A0A1S5SAF1	Streptococcus_phage	4.6e-63	52.3
AYB02791.1\|46397_46658_+	hypothetical protein	M1PG86	Streptococcus_phage	1.3e-13	52.9
AYB02792.1\|46720_48292_-	signal recognition particle protein	NA	NA	NA	NA
AYB02793.1\|48303_48636_-	putative DNA-binding protein	NA	NA	NA	NA
AYB02794.1\|48740_49439_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYB02795.1\|49515_50718_-	hypothetical protein	NA	NA	NA	NA
AYB02796.1\|50867_51821_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB02797.1\|52042_53605_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.1e-19	30.3
AYB02798.1\|53961_55104_+	cation:proton antiporter	NA	NA	NA	NA
AYB02799.1\|55414_56128_+	DUF554 domain-containing protein	NA	NA	NA	NA
AYB02800.1\|56302_57778_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.6e-76	39.2
AYB02801.1\|57977_58457_-	glutathione peroxidase	NA	NA	NA	NA
AYB02802.1\|58557_59592_-	LD-carboxypeptidase	NA	NA	NA	NA
AYB02803.1\|59917_61570_-	DUF2075 domain-containing protein	NA	NA	NA	NA
AYB02804.1\|61559_61898_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
AYB02805.1\|62054_63230_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_2

78941 : 200750

114

Bacillus_phage(15.15%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB02819.1\|78941_80046_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	7.7e-68	48.7
AYB02820.1\|80823_81009_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA
AYB02821.1\|81080_81992_+	FAD:protein FMN transferase	NA	NA	NA	NA
AYB02822.1\|82075_82477_-\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	3.6e-36	60.2
AYB02823.1\|82603_83872_-	purine permease	Q9KX94	Enterobacteria_phage	5.2e-28	28.0
AYB02824.1\|83871_84453_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
AYB02825.1\|84694_85678_-	GMP reductase	G3MBI2	Bacillus_virus	5.6e-139	75.4
AYB02826.1\|85931_87461_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
AYB02827.1\|87453_88182_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-27	37.7
AYB02828.1\|88417_89266_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
AYB02829.1\|89421_90111_+	multidrug transporter	NA	NA	NA	NA
AYB02830.1\|90298_91057_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYB02831.1\|91131_92124_-	phosphate acetyltransferase	NA	NA	NA	NA
AYB02832.1\|92140_93034_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AYB02833.1\|93030_93867_-	NAD kinase	NA	NA	NA	NA
AYB02834.1\|93841_94513_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
AYB02835.1\|94606_95179_+	CYTH domain-containing protein	NA	NA	NA	NA
AYB02836.1\|95292_96264_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	4.2e-38	35.5
AYB02837.1\|96267_97383_+	cysteine desulfurase	H7BUW1	unidentified_phage	2.3e-27	35.8
AYB02838.1\|97384_97732_+	cysteine desulfurase	NA	NA	NA	NA
AYB02839.1\|97800_98013_+	DUF4649 family protein	NA	NA	NA	NA
AYB02840.1\|98187_98832_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
AYB02841.1\|98840_99542_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
AYB02842.1\|99538_100219_-	JAB domain-containing protein	NA	NA	NA	NA
AYB02843.1\|100261_101386_-	AI-2E family transporter	NA	NA	NA	NA
AYB02844.1\|101488_102928_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
AYB02845.1\|103066_103666_-	histidine phosphatase family protein	NA	NA	NA	NA
AYB02846.1\|103777_104395_-	lipase	NA	NA	NA	NA
AYB02847.1\|104475_105963_-	glycosyl hydrolase family protein	NA	NA	NA	NA
AYB02848.1\|106221_107154_+	AraC family transcriptional regulator	NA	NA	NA	NA
AYB02849.1\|107245_109165_-	PTS beta-glucoside transporter subunit EIIBCA	NA	NA	NA	NA
AYB02850.1\|109451_110279_-	PRD domain-containing protein	NA	NA	NA	NA
AYB02851.1\|110358_111906_-	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA
AYB02852.1\|112123_116668_-	peptidase S8	NA	NA	NA	NA
AYB02853.1\|116861_118022_-	NADP-dependent malic enzyme	NA	NA	NA	NA
AYB02854.1\|118044_119352_-	malate permease	A0A140XAH4	Dickeya_phage	3.0e-18	56.1
AYB02855.1\|119512_121033_+	sensor histidine kinase	NA	NA	NA	NA
AYB02856.1\|121034_121706_+	response regulator	NA	NA	NA	NA
AYB02857.1\|121997_123071_-	extracellular solute-binding protein	NA	NA	NA	NA
AYB02858.1\|123063_123840_-	ABC transporter permease	NA	NA	NA	NA
AYB02859.1\|123836_124631_-	ABC transporter permease	Q6GZ02	Mycoplasma_phage	4.3e-12	25.5
AYB02860.1\|124614_125769_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.6e-36	40.3
AYB02861.1\|125803_126697_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
AYB02862.1\|126951_128118_+\|transposase	IS30 family transposase	NA	NA	NA	NA
AYB02863.1\|128369_128861_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
AYB02864.1\|128857_129217_-	dihydroneopterin aldolase	NA	NA	NA	NA
AYB02865.1\|129223_130024_-	dihydropteroate synthase	NA	NA	NA	NA
AYB02866.1\|130033_130597_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.0e-47	51.6
AYB02867.1\|130625_131885_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
AYB02868.1\|131968_132829_-	homoserine kinase	NA	NA	NA	NA
AYB02869.1\|132830_134117_-	homoserine dehydrogenase	NA	NA	NA	NA
AYB02870.1\|134301_135222_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
AYB02871.1\|135481_136657_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.6e-26	29.6
AYB02872.1\|137001_138107_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
AYB02873.1\|138174_138615_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	5.4e-17	36.8
AYB02874.1\|138837_139203_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
AYB02875.1\|139266_139767_-	50S ribosomal protein L10	NA	NA	NA	NA
AYB02876.1\|140030_140984_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB02877.1\|142543_143257_-	hypothetical protein	NA	NA	NA	NA
AYB02878.1\|143364_143964_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
AYB02879.1\|143973_145203_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	9.5e-136	59.9
AYB02880.1\|145235_145406_-	hypothetical protein	NA	NA	NA	NA
AYB02881.1\|145427_145925_-	dihydrofolate reductase	A0A1L7N103	Ralstonia_phage	6.8e-16	36.7
AYB02882.1\|146003_146843_-	thymidylate synthase	U5J9N5	Bacillus_phage	2.1e-81	53.2
AYB02883.1\|147038_148211_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
AYB02884.1\|148191_149478_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
AYB02885.1\|149501_150497_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
AYB02886.1\|150477_151497_-	phosphomevalonate kinase	NA	NA	NA	NA
AYB02887.1\|151489_152434_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
AYB02888.1\|152409_153294_-	mevalonate kinase	NA	NA	NA	NA
AYB02889.1\|153424_155167_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	3.1e-23	24.6
AYB02890.1\|155168_156890_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-39	24.7
AYB02891.1\|157465_159496_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
AYB02892.1\|159531_159942_-	peptide deformylase	NA	NA	NA	NA
AYB02893.1\|160021_161371_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
AYB02894.1\|161504_163271_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.0e-51	29.9
AYB02895.1\|163270_165013_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	24.4
AYB02896.1\|165114_165594_-	N-acetyltransferase	NA	NA	NA	NA
AYB02897.1\|165595_167482_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	8.2e-62	30.5
AYB02898.1\|167478_168687_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.1e-39	43.6
AYB02899.1\|168683_169451_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
AYB02900.1\|169467_170319_-	DegV family protein	NA	NA	NA	NA
AYB02901.1\|170318_170699_-	DUF1149 family protein	NA	NA	NA	NA
AYB02902.1\|170771_171293_-	hypothetical protein	NA	NA	NA	NA
AYB02903.1\|171489_171963_+\|transposase	IS200/IS605 family transposase	NA	NA	NA	NA
AYB02904.1\|172101_172782_-	N-acetylmuramidase	S5M633	Brevibacillus_phage	1.0e-09	38.4
AYB02905.1\|172991_173606_-	N-acetylmuramidase	NA	NA	NA	NA
AYB02906.1\|173694_175647_-	PTS fructose transporter subunit IIC	NA	NA	NA	NA
AYB02907.1\|175643_176555_-	1-phosphofructokinase	NA	NA	NA	NA
AYB02908.1\|176551_177265_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
AYB02909.1\|177426_178350_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
AYB02910.1\|179504_180503_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.2e-26	51.6
AYB02911.1\|180495_181239_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AYB02912.1\|181225_181744_-	ribosome maturation factor RimM	NA	NA	NA	NA
AYB02913.1\|181998_183528_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
AYB02914.1\|183699_183939_-	KH domain-containing protein	NA	NA	NA	NA
AYB02915.1\|183948_184221_-	30S ribosomal protein S16	NA	NA	NA	NA
AYB02916.1\|184491_185100_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.8e-40	47.9
AYB02917.1\|185092_186295_-	FtsX-like permease family protein	NA	NA	NA	NA
AYB02918.1\|186306_187020_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-36	41.7
AYB02919.1\|187038_188283_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
AYB02920.1\|188549_189809_-	uracil permease	Q9KX94	Enterobacteria_phage	3.9e-60	37.1
AYB02921.1\|189823_190345_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
AYB02922.1\|190548_191448_-	RluA family pseudouridine synthase	NA	NA	NA	NA
AYB02923.1\|191448_191895_-	signal peptidase II	NA	NA	NA	NA
AYB02924.1\|191891_192806_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.8e-06	28.5
AYB02925.1\|192950_193244_-	50S ribosomal protein L27	NA	NA	NA	NA
AYB02926.1\|193271_193595_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
AYB02927.1\|193602_193917_-	50S ribosomal protein L21	NA	NA	NA	NA
AYB02928.1\|194228_195182_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB02929.1\|195313_196225_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
AYB02930.1\|196481_197592_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
AYB02931.1\|198257_199454_-	metallophosphatase	A0A2H4J434	uncultured_Caudovirales_phage	3.6e-39	35.1
AYB02932.1\|199535_200750_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA

DBSCAN-SWA_3

408955 : 463305

Staphylococcus_phage(35.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB03122.1\|408955_410131_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB03123.1\|412920_416466_-	chromosome segregation protein SMC	NA	NA	NA	NA
AYB03124.1\|416466_417159_-	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	9.5e-24	33.8
AYB03125.1\|417261_418071_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	3.1e-34	34.8
AYB03126.1\|418074_419433_-	cell wall metabolism sensor histidine kinase VicK	W8CYF6	Bacillus_phage	8.0e-35	34.8
AYB03127.1\|419425_420136_-	DNA-binding response regulator	W8CYM9	Bacillus_phage	1.5e-40	40.7
AYB03128.1\|420392_421190_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-37	41.5
AYB03129.1\|421186_422017_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA
AYB03130.1\|422031_422733_+	amino acid ABC transporter permease	NA	NA	NA	NA
AYB03131.1\|422748_423396_+	amino acid ABC transporter permease	NA	NA	NA	NA
AYB03132.1\|423433_424441_-	DUF3114 domain-containing protein	NA	NA	NA	NA
AYB03133.1\|424529_425240_-	aquaporin family protein	M1HWZ0	Paramecium_bursaria_Chlorella_virus	1.1e-32	34.9
AYB03134.1\|425253_425628_-	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA
AYB03135.1\|425627_426203_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
AYB03136.1\|426212_427202_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
AYB03137.1\|427356_427902_+	dihydroxyacetone kinase transcriptional activator DhaS	NA	NA	NA	NA
AYB03138.1\|427904_428894_+	DhaKLM operon coactivator DhaQ	NA	NA	NA	NA
AYB03139.1\|429486_430597_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
AYB03140.1\|430806_431982_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB03141.1\|432048_432513_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-06	26.0
AYB03142.1\|432839_433625_-	multidrug ABC transporter permease	NA	NA	NA	NA
AYB03143.1\|433626_434445_-	antibiotic ABC transporter permease	NA	NA	NA	NA
AYB03144.1\|434446_435439_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	4.0e-15	27.7
AYB03145.1\|435714_436179_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.4e-17	36.8
AYB03146.1\|436371_438312_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.5e-119	38.3
AYB03147.1\|438696_440034_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
AYB03148.1\|440035_441034_-	glycosyltransferase	NA	NA	NA	NA
AYB03149.1\|441162_442164_-	catabolite control protein A	NA	NA	NA	NA
AYB03150.1\|442335_443421_+	aminopeptidase P family protein	NA	NA	NA	NA
AYB03151.1\|443583_443925_-	hypothetical protein	NA	NA	NA	NA
AYB03152.1\|444114_444777_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
AYB03153.1\|444787_445168_+	lactoylglutathione lyase	NA	NA	NA	NA
AYB03154.1\|445294_446221_+	glycosyltransferase	V5USA4	Oenococcus_phage	7.8e-82	49.8
AYB03155.1\|446364_447048_+	DUF969 domain-containing protein	NA	NA	NA	NA
AYB03156.1\|447047_447974_+	DUF979 domain-containing protein	NA	NA	NA	NA
AYB03157.1\|448055_449231_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB03158.1\|449357_450005_+	pyroglutamyl-peptidase I	NA	NA	NA	NA
AYB03159.1\|450155_450872_-	glutamine cyclotransferase	NA	NA	NA	NA
AYB03160.1\|450881_451349_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.1e-39	56.3
AYB03161.1\|451348_453664_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.1e-96	40.8
AYB03162.1\|453750_453987_-	preprotein translocase subunit SecG	NA	NA	NA	NA
AYB03163.1\|454032_454179_-	50S ribosomal protein L33	NA	NA	NA	NA
AYB03164.1\|454420_455902_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	2.0e-71	40.9
AYB03165.1\|456001_456640_-	YitT family protein	NA	NA	NA	NA
AYB03166.1\|456647_457259_-	dephospho-CoA kinase	NA	NA	NA	NA
AYB03167.1\|457216_458056_-	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	2.0e-28	33.6
AYB03168.1\|458248_459088_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
AYB03169.1\|459364_460987_+	transglutaminase	NA	NA	NA	NA
AYB03170.1\|461024_461276_+	chitin deacetylase	NA	NA	NA	NA
AYB03171.1\|462129_463305_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_4

510473 : 526283

Streptococcus_phage(80.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB03216.1\|510473_511301_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	2.9e-128	79.9
AYB03217.1\|511302_511962_+	DNA alkylation repair protein	NA	NA	NA	NA
AYB03218.1\|512109_512484_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA
AYB03219.1\|512508_512925_+	VOC family protein	NA	NA	NA	NA
AYB03220.1\|513075_513978_+	cation transporter	M1Q1N9	Streptococcus_phage	4.2e-72	49.3
AYB03221.1\|514103_515786_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	1.7e-103	41.0
AYB03222.1\|515777_516134_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.0e-37	66.1
AYB03223.1\|516130_516625_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.9e-42	53.5
AYB03224.1\|516694_517870_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.0e-166	75.1
AYB03225.1\|517912_518461_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	2.1e-50	59.6
AYB04574.1\|518484_519576_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.0e-162	76.8
AYB03226.1\|519695_520328_+	copper homeostasis protein CutC	NA	NA	NA	NA
AYB03227.1\|520507_521374_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	72.5
AYB03228.1\|521378_521711_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.3e-28	56.5
AYB03229.1\|521700_522501_-	signal peptidase II	NA	NA	NA	NA
AYB03230.1\|522497_523373_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.3e-73	49.7
AYB03231.1\|523390_524023_-	dTMP kinase	M1PSC7	Streptococcus_phage	1.2e-70	63.6
AYB03232.1\|524103_524766_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	5.2e-64	59.4
AYB03233.1\|524808_525519_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-18	28.1
AYB03234.1\|525518_526283_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-16	27.0

DBSCAN-SWA_5

863191 : 926057

Bacillus_phage(30.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB03531.1\|863191_864145_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB03532.1\|864159_864798_-	adenylate kinase	NA	NA	NA	NA
AYB03533.1\|864937_866242_-	preprotein translocase subunit SecY	NA	NA	NA	NA
AYB03534.1\|866258_866699_-	50S ribosomal protein L15	NA	NA	NA	NA
AYB03535.1\|866825_867008_-	50S ribosomal protein L30	NA	NA	NA	NA
AYB03536.1\|867022_867517_-	30S ribosomal protein S5	NA	NA	NA	NA
AYB03537.1\|867535_867892_-	50S ribosomal protein L18	NA	NA	NA	NA
AYB03538.1\|867987_868524_-	50S ribosomal protein L6	NA	NA	NA	NA
AYB03539.1\|868723_869122_-	30S ribosomal protein S8	NA	NA	NA	NA
AYB03540.1\|869275_869461_-	30S ribosomal protein S14 type Z	NA	NA	NA	NA
AYB03541.1\|869476_870019_-	50S ribosomal protein L5	NA	NA	NA	NA
AYB03542.1\|870045_870351_-	50S ribosomal protein L24	NA	NA	NA	NA
AYB03543.1\|870436_870805_-	50S ribosomal protein L14	NA	NA	NA	NA
AYB03544.1\|870829_871090_-	30S ribosomal protein S17	NA	NA	NA	NA
AYB03545.1\|871117_871324_-	50S ribosomal protein L29	NA	NA	NA	NA
AYB03546.1\|871333_871747_-	50S ribosomal protein L16	NA	NA	NA	NA
AYB03547.1\|871750_872404_-	30S ribosomal protein S3	NA	NA	NA	NA
AYB03548.1\|872416_872761_-	50S ribosomal protein L22	NA	NA	NA	NA
AYB03549.1\|872776_873055_-	30S ribosomal protein S19	NA	NA	NA	NA
AYB03550.1\|873142_873976_-	50S ribosomal protein L2	NA	NA	NA	NA
AYB03551.1\|873993_874290_-	50S ribosomal protein L23	NA	NA	NA	NA
AYB03552.1\|874289_874913_-	50S ribosomal protein L4	NA	NA	NA	NA
AYB03553.1\|874936_875563_-	50S ribosomal protein L3	NA	NA	NA	NA
AYB03554.1\|875810_876119_-	30S ribosomal protein S10	NA	NA	NA	NA
AYB03555.1\|876432_877599_+\|transposase	IS30-like element ISSag9 family transposase	NA	NA	NA	NA
AYB03556.1\|877946_879248_-	MATE family efflux transporter	NA	NA	NA	NA
AYB03557.1\|879290_880775_-	threonine synthase	NA	NA	NA	NA
AYB03558.1\|881106_883755_-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
AYB03559.1\|883913_885692_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	6.0e-22	25.6
AYB03560.1\|885688_886102_-	hypothetical protein	NA	NA	NA	NA
AYB03561.1\|886098_886548_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
AYB03562.1\|886800_887805_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.1e-08	33.1
AYB03563.1\|888022_888925_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYB03564.1\|889024_890317_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.1e-17	32.7
AYB03565.1\|890510_890735_-	phosphoribosylaminoimidazole carboxylase	NA	NA	NA	NA
AYB03566.1\|891045_891711_+	hypothetical protein	NA	NA	NA	NA
AYB03567.1\|892160_893297_+	CHAP domain-containing protein	F8HGP2	Streptococcus_phage	4.1e-08	30.5
AYB03568.1\|893539_893944_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AYB03569.1\|893945_894755_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
AYB03570.1\|894741_895623_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
AYB03571.1\|895668_896154_-	PTS mannose/fructose/sorbose transporter subunit IIB	NA	NA	NA	NA
AYB03572.1\|896150_897935_-	beta-galactosidase	NA	NA	NA	NA
AYB03573.1\|898095_898815_+	GntR family transcriptional regulator	NA	NA	NA	NA
AYB03574.1\|898855_899836_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA
AYB03575.1\|899846_901022_-	SIS domain-containing protein	NA	NA	NA	NA
AYB03576.1\|901039_901771_-	GntR family transcriptional regulator	NA	NA	NA	NA
AYB03577.1\|901975_902212_-	acyl carrier protein	NA	NA	NA	NA
AYB03578.1\|902217_903213_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
AYB03579.1\|903336_904104_-	DNA repair protein RecO	NA	NA	NA	NA
AYB03580.1\|904093_905272_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AYB03581.1\|905413_906379_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	8.2e-42	35.8
AYB03582.1\|906648_907863_-	CHAP domain-containing protein	NA	NA	NA	NA
AYB03583.1\|907961_908459_-	rod shape-determining protein MreD	NA	NA	NA	NA
AYB03584.1\|908458_909274_-	rod shape-determining protein MreC	NA	NA	NA	NA
AYB03585.1\|922690_923299_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	3.8e-37	47.0
AYB03586.1\|923286_924392_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	4.3e-71	49.3
AYB03587.1\|924481_925657_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB03588.1\|925781_926057_-\|transposase	transposase	A0A1B1P773	Bacillus_phage	4.6e-06	41.8

DBSCAN-SWA_6

1229277 : 1264044

Staphylococcus_phage(27.27%)

tRNA,integrase,transposase

attL 1221397:1221411|attR 1241806:1241820

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1221397:1221411	attL	NA	NA	NA	NA
AYB03835.1\|1229277_1230231_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB03836.1\|1230336_1231029_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AYB03837.1\|1231030_1231456_+	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA
AYB03838.1\|1231445_1232465_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.6e-59	41.3
AYB03839.1\|1232661_1232931_-	30S ribosomal protein S14	NA	NA	NA	NA
AYB03840.1\|1233106_1234279_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	3.2e-16	50.6
AYB03841.1\|1234908_1235418_+	DUF536 domain-containing protein	NA	NA	NA	NA
AYB03842.1\|1235395_1236049_+	3'-5' exonuclease	NA	NA	NA	NA
AYB03843.1\|1236190_1236913_+	MerR family transcriptional regulator	NA	NA	NA	NA
AYB03844.1\|1236998_1239785_-	endo-beta-N-acetylglucosaminidase	NA	NA	NA	NA
AYB03845.1\|1240074_1240374_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
AYB03846.1\|1240451_1241603_-\|integrase	site-specific integrase	A0A0S2GLI2	Bacillus_phage	1.3e-22	26.9
AYB03847.1\|1241589_1241850_-	DUF3173 domain-containing protein	NA	NA	NA	NA
1241806:1241820	attR	NA	NA	NA	NA
AYB03848.1\|1241960_1243148_-	replication protein RepA	M1STP3	Diporeia_sp._associated_circular_virus	2.9e-12	22.9
AYB03849.1\|1243289_1243874_-	hypothetical protein	NA	NA	NA	NA
AYB03850.1\|1243874_1245044_-	cell division protein FtsK	NA	NA	NA	NA
AYB03851.1\|1245046_1245403_-	hypothetical protein	NA	NA	NA	NA
AYB03852.1\|1245651_1246233_+	hypothetical protein	NA	NA	NA	NA
AYB03853.1\|1246268_1246616_-	XRE family transcriptional regulator	NA	NA	NA	NA
AYB03854.1\|1246786_1247659_+	hypothetical protein	NA	NA	NA	NA
AYB03855.1\|1247981_1249454_+	serine/threonine protein kinase	A0A1V0SBL0	Catovirus	3.3e-10	27.6
AYB03856.1\|1249594_1250770_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB03857.1\|1251287_1252427_+	hypothetical protein	NA	NA	NA	NA
AYB03858.1\|1253678_1254789_+\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
AYB04597.1\|1256353_1256713_-	hypothetical protein	NA	NA	NA	NA
AYB03859.1\|1256709_1256904_-	hypothetical protein	NA	NA	NA	NA
AYB03860.1\|1257322_1257730_+	XRE family transcriptional regulator	A0A139ZPK3	Marinitoga_camini_virus	4.7e-07	42.6
AYB03861.1\|1257823_1258018_+	hypothetical protein	NA	NA	NA	NA
AYB03862.1\|1257996_1258323_-	hypothetical protein	NA	NA	NA	NA
AYB03863.1\|1258303_1258483_-	transcriptional regulator	NA	NA	NA	NA
AYB03864.1\|1259088_1260042_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.8e-39	35.8
AYB03865.1\|1260177_1262700_+	Cna B-type domain-containing protein	NA	NA	NA	NA
AYB03866.1\|1262868_1264044_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1

DBSCAN-SWA_7

1343019 : 1402343

Bacillus_phage(27.27%)

protease,holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB03940.1\|1343019_1344131_-\|transposase	IS3-like element IS981 family transposase	A0A1P8CWQ3	Bacillus_phage	1.2e-49	41.4
AYB03941.1\|1344960_1347453_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
AYB03942.1\|1347765_1348269_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
AYB03943.1\|1348419_1349346_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
AYB03944.1\|1349554_1350196_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AYB03945.1\|1350207_1351215_-	sugar kinase	NA	NA	NA	NA
AYB03946.1\|1351237_1351879_-	hypothetical protein	NA	NA	NA	NA
AYB03947.1\|1351892_1352705_-	gluconate 5-dehydrogenase	NA	NA	NA	NA
AYB03948.1\|1353034_1353469_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
AYB03949.1\|1353468_1354668_+	glucuronyl hydrolase	NA	NA	NA	NA
AYB03950.1\|1354704_1355196_+	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA
AYB03951.1\|1355216_1356083_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
AYB03952.1\|1356069_1356885_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
AYB03953.1\|1356955_1358872_+	heparinase II/III-like protein	NA	NA	NA	NA
AYB03954.1\|1358967_1359969_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
AYB03955.1\|1360028_1363532_-	hyaluronate lyase	NA	NA	NA	NA
AYB03956.1\|1363797_1364673_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.7e-18	28.8
AYB03957.1\|1364672_1365407_+	ABC transporter permease	NA	NA	NA	NA
AYB03958.1\|1365403_1366492_+	sensor histidine kinase	NA	NA	NA	NA
AYB03959.1\|1366493_1367090_+	DNA-binding response regulator	NA	NA	NA	NA
AYB03960.1\|1367168_1367351_+	hypothetical protein	NA	NA	NA	NA
AYB03961.1\|1367579_1368455_+	MerR family transcriptional regulator	NA	NA	NA	NA
AYB03962.1\|1368891_1369167_+	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
AYB03963.1\|1369221_1369503_+	hypothetical protein	NA	NA	NA	NA
AYB03964.1\|1369521_1369821_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03965.1\|1369832_1370150_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03966.1\|1370165_1371521_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
AYB03967.1\|1371575_1374122_+\|holin	choline trimethylamine-lyase	Q70BG9	Salmonella_phage	2.3e-06	38.7
AYB03968.1\|1374187_1375144_+\|holin	choline TMA-lyase-activating enzyme	A0A2P0VNQ0	Tetraselmis_virus	1.1e-14	28.1
AYB03969.1\|1375160_1375514_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03970.1\|1375510_1375957_+	hypothetical protein	NA	NA	NA	NA
AYB03971.1\|1375953_1377084_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
AYB03972.1\|1377149_1377788_+	hypothetical protein	NA	NA	NA	NA
AYB03973.1\|1377780_1378620_+	ethanolamine utilization protein EutJ	NA	NA	NA	NA
AYB03974.1\|1378631_1378928_+	ethanolamine utilization protein EutN	NA	NA	NA	NA
AYB03975.1\|1379997_1380573_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03976.1\|1380604_1382266_+	acetaldehyde dehydrogenase (acetylating)	A0A1X9I5D4	Streptococcus_phage	5.6e-06	21.8
AYB03977.1\|1382276_1382975_+	phosphate propanoyltransferase	NA	NA	NA	NA
AYB03978.1\|1382987_1383263_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03979.1\|1383293_1383569_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03980.1\|1383598_1383874_+	BMC domain-containing protein	NA	NA	NA	NA
AYB03981.1\|1383996_1387632_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
AYB03982.1\|1387651_1388686_+	DMT family transporter	NA	NA	NA	NA
AYB03983.1\|1388897_1389968_+	cell wall anchor protein	NA	NA	NA	NA
AYB03984.1\|1390101_1391187_+	ABC transporter permease	NA	NA	NA	NA
AYB03985.1\|1391188_1391866_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-36	37.4
AYB03986.1\|1391908_1392598_+	DNA-binding response regulator	W8CYM9	Bacillus_phage	2.0e-37	40.6
AYB03987.1\|1392584_1393646_+	sensor histidine kinase	W8CYF6	Bacillus_phage	3.1e-34	31.7
AYB03988.1\|1393800_1394397_-	phosphoribulokinase	NA	NA	NA	NA
AYB03989.1\|1394623_1395493_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
AYB03990.1\|1395567_1396761_+	MFS transporter	NA	NA	NA	NA
AYB03991.1\|1396895_1397351_+	hypothetical protein	NA	NA	NA	NA
AYB03992.1\|1397639_1399001_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	3.3e-214	75.1
AYB03993.1\|1399114_1400557_-	hypothetical protein	NA	NA	NA	NA
AYB03994.1\|1400638_1401145_-	DNA topology modulation protein	A0A097BYE2	Leuconostoc_phage	4.6e-28	38.1
AYB03995.1\|1401237_1402343_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3

DBSCAN-SWA_8

1779774 : 1848553

Staphylococcus_phage(28.57%)

tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB04293.1\|1779774_1780880_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
AYB04294.1\|1781021_1781711_+	competence protein CoiA	NA	NA	NA	NA
AYB04295.1\|1781736_1783539_+	oligoendopeptidase F	NA	NA	NA	NA
AYB04296.1\|1783540_1784194_+	HAD family hydrolase	NA	NA	NA	NA
AYB04297.1\|1784229_1784874_+	HAD family hydrolase	NA	NA	NA	NA
AYB04298.1\|1785044_1785752_+	O-methyltransferase	NA	NA	NA	NA
AYB04299.1\|1785815_1786757_+	foldase PrsA	NA	NA	NA	NA
AYB04300.1\|1787054_1789673_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.3e-61	33.6
AYB04301.1\|1789800_1790445_-	hypothetical protein	NA	NA	NA	NA
AYB04302.1\|1790542_1791235_-	hypothetical protein	NA	NA	NA	NA
AYB04303.1\|1791625_1792408_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
AYB04304.1\|1792424_1793600_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
AYB04305.1\|1793701_1794877_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB04306.1\|1796206_1797457_-	chloride channel protein	NA	NA	NA	NA
AYB04307.1\|1797550_1798510_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	8.2e-127	69.9
AYB04308.1\|1798973_1801133_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.7e-258	61.6
AYB04309.1\|1801162_1801381_-	glutaredoxin-like protein NrdH	A0A249XUR7	Enterococcus_phage	5.8e-12	42.7
AYB04310.1\|1801904_1802168_+	phosphocarrier protein HPr	NA	NA	NA	NA
AYB04311.1\|1802172_1803906_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
AYB04611.1\|1804042_1805470_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
AYB04312.1\|1805616_1806897_+	deacetylase	NA	NA	NA	NA
AYB04313.1\|1807086_1808175_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	5.6e-31	32.9
AYB04314.1\|1808327_1808954_+	uridine kinase	A0A1V0SAA3	Catovirus	1.0e-32	37.7
AYB04315.1\|1808962_1809241_+	DUF1294 domain-containing protein	NA	NA	NA	NA
AYB04316.1\|1809339_1809837_+	GAF domain-containing protein	NA	NA	NA	NA
AYB04317.1\|1809836_1811510_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.1e-47	41.6
AYB04318.1\|1811560_1811764_+	DUF3272 family protein	NA	NA	NA	NA
AYB04319.1\|1811744_1812707_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
AYB04320.1\|1812842_1815122_+	internalin	NA	NA	NA	NA
AYB04321.1\|1815506_1816694_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.6e-140	66.8
AYB04322.1\|1816876_1818136_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
AYB04323.1\|1818385_1819930_+	MFS transporter	NA	NA	NA	NA
AYB04324.1\|1819988_1821014_+	sugar kinase	NA	NA	NA	NA
AYB04325.1\|1821120_1821804_+	FadR family transcriptional regulator	NA	NA	NA	NA
AYB04326.1\|1821915_1822533_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
AYB04327.1\|1822543_1823944_+	glucuronate isomerase	NA	NA	NA	NA
AYB04328.1\|1823966_1825013_+	mannonate dehydratase	NA	NA	NA	NA
AYB04329.1\|1825063_1825903_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
AYB04330.1\|1825969_1827499_+	beta-glucuronidase	NA	NA	NA	NA
AYB04331.1\|1827622_1828429_+	HAD family hydrolase	NA	NA	NA	NA
AYB04332.1\|1828459_1830250_+	beta-hexosaminidase	NA	NA	NA	NA
AYB04333.1\|1830402_1830954_+	N-acetyltransferase	NA	NA	NA	NA
AYB04334.1\|1830946_1832236_+	CBS domain-containing protein	NA	NA	NA	NA
AYB04335.1\|1832262_1833123_+	methionyl aminopeptidase	NA	NA	NA	NA
AYB04336.1\|1833124_1834078_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
AYB04337.1\|1834148_1835432_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
AYB04338.1\|1835424_1835943_+	shikimate kinase	NA	NA	NA	NA
AYB04339.1\|1836070_1837507_+	LytR family transcriptional regulator	NA	NA	NA	NA
AYB04340.1\|1837588_1838947_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	F5CA72	Streptococcus_phi-m46.1-like_phage	3.8e-194	74.9
AYB04341.1\|1839216_1840095_+	nucleotidyltransferase	NA	NA	NA	NA
AYB04342.1\|1840072_1840645_+	SLATT domain-containing protein	NA	NA	NA	NA
AYB04343.1\|1842428_1843534_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.3e-70	49.3
AYB04344.1\|1843749_1844613_+	XRE family transcriptional regulator	NA	NA	NA	NA
AYB04345.1\|1845148_1846324_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	5.9e-26	29.6
AYB04346.1\|1846801_1847977_+\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.4e-27	30.1
AYB04347.1\|1848247_1848553_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032400

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection