CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
CP032446	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 chromosome, complete genome	2 crisprs	PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,DEDDh,DinG	1	12
CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	0 crisprs	cas14j	0	0
CP032448	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU2-USMARC-69840, complete sequence	0 crisprs	DEDDh	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: CP032446_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032446_1

974714-974984

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAAC	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAAC	CRT

4 spacers

cas8e

The CRISPR arrays of CP032446_1

>merge|CP032446|1|974714-974984|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACTGCCGTGCCTGTCCAGGACAAATTGCCGATTATTGTGTTCCCCGCGCCAGCGGGGATAAACTGCTGCCGGTCTGTGCTGTTGTCGTCAATAATCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGTTACTGATGCAGACTGCGGATCTTAATCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCGCCAACGACTGGAATTTTTGCGTGTAGCCGTGTTCCCCGCGCCAACAAGGATAGCC

>CP032446|1|1|974714-974925|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACTG	CCGTGCCTGTCCAGGACAAATTGCCGATTATT
GTGTTCCCCGCGCCAGCGGGGATAAACTG	CTGCCGGTCTGTGCTGTTGTCGTCAATAATCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>CP032446|1|1|974714-974984|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGCCGTGCCTGTCCAGGACAAATTGCCGATTATT
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGCTGCCGGTCTGTGCTGTTGTCGTCAATAATCA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCC

>CP032446|1|1|974714-974984|CRT
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGCCGTGCCTGTCCAGGACAAATTGCCGATTATT
GTGTTCCCCGCGCCAGCGGGGATAAAC	TGCTGCCGGTCTGTGCTGTTGTCGTCAATAATCA
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGAGTTACTGATGCAGACTGCGGATCTTAATCGG
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGTGCGCCAACGACTGGAATTTTTGCGTGTAGCC
GTGTTCCCCGCGCCAACAAGGATAGCC

Protein	Signature genes	Signature genes Name	Protein_function
CP032446.1\|AYB82356.1\|976755_978555_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
CP032446.1\|AYB82355.1\|975969_976332_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
CP032446.1\|AYB82358.1\|980368_981103_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP032446.1\|AYB82351.1\|970591_972229_+\|CTP-synthetase	unknown	unknown	gnl\|CDD\|235437
CP032446.1\|AYB82359.1\|985262_986819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP032446.1\|AYB85899.1\|981190_982144_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP032446.1\|AYB85897.1\|976260_976431_+\|6-pyruvoyl-tetrahydrobiopterin-synthase	unknown	unknown	unknown
CP032446.1\|AYB82346.1\|964278_964785_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
CP032446.1\|AYB82353.1\|973745_974417_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
CP032446.1\|AYB82352.1\|972311_973610_+\|enolase	unknown	unknown	gnl\|CDD\|234617
CP032446.1\|AYB82350.1\|969563_970364_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
CP032446.1\|AYB85898.1\|980223_980442_-\|hypothetical-protein	unknown	unknown	unknown
CP032446.1\|AYB85900.1\|982259_982466_-\|hypothetical-protein	unknown	unknown	unknown
CP032446.1\|AYB82349.1\|968369_968957_-\|fimbrial-protein-SteA	unknown	unknown	gnl\|CDD\|185169
CP032446.1\|AYB82347.1\|964804_965578_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185177
CP032446.1\|AYB82345.1\|963793_964264_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
CP032446.1\|AYB82344.1\|963260_963797_-\|fimbrial-protein-SteF	unknown	unknown	gnl\|CDD\|185168
CP032446.1\|AYB82357.1\|978554_980267_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
CP032446.1\|AYB82348.1\|965590_968290_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
CP032446.1\|AYB82354.1\|975084_975882_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158

Protein	Function_ID	Function_description	E-value
CP032446.1\|AYB82356.1\|976755_978555_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
CP032446.1\|AYB82355.1\|975969_976332_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
CP032446.1\|AYB82358.1\|980368_981103_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
CP032446.1\|AYB82351.1\|970591_972229_+\|CTP-synthetase	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
CP032446.1\|AYB82359.1\|985262_986819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP032446.1\|AYB82346.1\|964278_964785_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	4.31975e-105
CP032446.1\|AYB82353.1\|973745_974417_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
CP032446.1\|AYB82352.1\|972311_973610_+\|enolase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
CP032446.1\|AYB82350.1\|969563_970364_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
CP032446.1\|AYB85899.1\|981190_982144_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP032446.1\|AYB82349.1\|968369_968957_-\|fimbrial-protein-SteA	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
CP032446.1\|AYB82347.1\|964804_965578_-\|fimbrial-protein	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
CP032446.1\|AYB82345.1\|963793_964264_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	2.10162e-98
CP032446.1\|AYB82344.1\|963260_963797_-\|fimbrial-protein-SteF	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	7.785e-121
CP032446.1\|AYB82357.1\|978554_980267_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
CP032446.1\|AYB82348.1\|965590_968290_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
CP032446.1\|AYB82354.1\|975084_975882_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	1.00381e-102

>CP032446.1|AYB82353.1|973745_974417_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>CP032446.1|AYB82352.1|972311_973610_+|enolase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKNITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>CP032446.1|AYB82351.1|970591_972229_+|CTP-synthetase
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>CP032446.1|AYB82350.1|969563_970364_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>CP032446.1|AYB82349.1|968369_968957_-|fimbrial-protein-SteA
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>CP032446.1|AYB82348.1|965590_968290_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSLSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSYQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLSLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPSTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>CP032446.1|AYB82347.1|964804_965578_-|fimbrial-protein
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>CP032446.1|AYB82346.1|964278_964785_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>CP032446.1|AYB82345.1|963793_964264_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGEMLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTSVPELGIELQQNGTVFPPGTSLTINESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>CP032446.1|AYB82344.1|963260_963797_-|fimbrial-protein-SteF
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGEEVMPGEFSGSATVSFEYQ
>CP032446.1|AYB82354.1|975084_975882_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGKNFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>CP032446.1|AYB82355.1|975969_976332_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>CP032446.1|AYB85897.1|976260_976431_+|6-pyruvoyl-tetrahydrobiopterin-synthase
MPFRHVRQAVSGFKGEIFIQRGGHDELSGNKKTAVGYRKAHFLSLTKTILRLVTGN
>CP032446.1|AYB82356.1|976755_978555_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGVVAVTPVPERKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAEALIGLLRPLTPRLYSIASAQAEVESEVHVTVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLNRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>CP032446.1|AYB82357.1|978554_980267_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>CP032446.1|AYB85898.1|980223_980442_-|hypothetical-protein
MVSANASTRSTFGSSFRAFRSSLDISSSRYTLPDGASLIRPTRAVGRIRHLCRHPAIQVIPRNHARDRAPGE
>CP032446.1|AYB82358.1|980368_981103_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP032446.1|AYB85899.1|981190_982144_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP032446.1|AYB85900.1|982259_982466_-|hypothetical-protein
MFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP032446.1|AYB82359.1|985262_986819_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIRGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE

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Crispr_ID: CP032446_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

CP032446_2

991144-991292

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAAC	CRISPRCasFinder

2 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of CP032446_2

>merge|CP032446|2|991144-991292|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTATCCCGAAATCACGTTCAAGAAAAATCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGGGTTGCATAGATGACACGCTTATAAATAGTGTTCCCCGCGTCAGCGGGGATAAAC

>CP032446|2|2|991144-991292|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGCGTATCCCGAAATCACGTTCAAGAAAAATCC
GTGTTCCCCGCGCCAGCGGGGATAAAC	CGGTTGGGTTGCATAGATGACACGCTTATAAATA
GTGTTCCCCGCGTCAGCGGGGATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
CP032446.1\|AYB85900.1\|982259_982466_-\|hypothetical-protein	unknown	unknown	unknown
CP032446.1\|AYB82369.1\|994949_995555_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
CP032446.1\|AYB82359.1\|985262_986819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
CP032446.1\|AYB82372.1\|996449_997160_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
CP032446.1\|AYB82366.1\|991308_992355_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
CP032446.1\|AYB82374.1\|997635_998685_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
CP032446.1\|AYB82375.1\|998665_999427_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
CP032446.1\|AYB82371.1\|996119_996431_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
CP032446.1\|AYB82358.1\|980368_981103_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
CP032446.1\|AYB82368.1\|993523_994963_+\|sulfate-adenylyltransferase	unknown	unknown	gnl\|CDD\|235349
CP032446.1\|AYB82362.1\|988458_989205_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
CP032446.1\|AYB82363.1\|989186_989837_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
CP032446.1\|AYB82367.1\|992605_993514_+\|sulfate-adenylyltransferase-subunit-2	unknown	unknown	gnl\|CDD\|235375
CP032446.1\|AYB85899.1\|981190_982144_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
CP032446.1\|AYB82361.1\|987389_988448_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
CP032446.1\|AYB82373.1\|997159_997639_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
CP032446.1\|AYB82370.1\|995572_995929_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
CP032446.1\|AYB82364.1\|989833_990754_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
CP032446.1\|AYB82360.1\|986815_987376_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
CP032446.1\|AYB82365.1\|990753_991047_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930

Protein	Function_ID	Function_description	E-value
CP032446.1\|AYB82371.1\|996119_996431_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
CP032446.1\|AYB82369.1\|994949_995555_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
CP032446.1\|AYB82359.1\|985262_986819_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
CP032446.1\|AYB82372.1\|996449_997160_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.09575e-119
CP032446.1\|AYB82366.1\|991308_992355_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
CP032446.1\|AYB82374.1\|997635_998685_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
CP032446.1\|AYB82375.1\|998665_999427_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
CP032446.1\|AYB82358.1\|980368_981103_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	7.73232e-139
CP032446.1\|AYB82368.1\|993523_994963_+\|sulfate-adenylyltransferase	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
CP032446.1\|AYB82362.1\|988458_989205_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.80035e-48
CP032446.1\|AYB82363.1\|989186_989837_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.46702e-75
CP032446.1\|AYB82367.1\|992605_993514_+\|sulfate-adenylyltransferase-subunit-2	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
CP032446.1\|AYB85899.1\|981190_982144_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
CP032446.1\|AYB82361.1\|987389_988448_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.52672e-140
CP032446.1\|AYB82373.1\|997159_997639_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.84083e-103
CP032446.1\|AYB82370.1\|995572_995929_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
CP032446.1\|AYB82364.1\|989833_990754_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.64033e-157
CP032446.1\|AYB82360.1\|986815_987376_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.5399e-34
CP032446.1\|AYB82365.1\|990753_991047_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62

>CP032446.1|AYB82365.1|990753_991047_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>CP032446.1|AYB82364.1|989833_990754_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGVRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>CP032446.1|AYB82363.1|989186_989837_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRREKSRQMIQFSSVDYTGVLVLNDPVLFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>CP032446.1|AYB82362.1|988458_989205_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYSLAQLQASLQHPVFPLYLGRKSHPLALPLAPQLLDGRAPDVLREAYRWYQDQFNTLKLTLPRLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>CP032446.1|AYB82361.1|987389_988448_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVEKIANCFGKVKAEKKPKDELTNAETEQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLANKPDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNGNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITALRENMNAVYAQETAFKDFNVMNQQGSMKDVLDFICA
>CP032446.1|AYB82360.1|986815_987376_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHDELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>CP032446.1|AYB82359.1|985262_986819_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAESPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPIWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIRGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFTNAKDARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>CP032446.1|AYB85900.1|982259_982466_-|hypothetical-protein
MFFRNIYPTNNYYKFFRLFLLEEALKEASSNAFCINQNLKKTTICGESSTFCLNYRHHKGLPTINVLY
>CP032446.1|AYB85899.1|981190_982144_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHTYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>CP032446.1|AYB82358.1|980368_981103_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>CP032446.1|AYB82366.1|991308_992355_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>CP032446.1|AYB82367.1|992605_993514_+|sulfate-adenylyltransferase-subunit-2
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>CP032446.1|AYB82368.1|993523_994963_+|sulfate-adenylyltransferase
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>CP032446.1|AYB82369.1|994949_995555_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>CP032446.1|AYB82370.1|995572_995929_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>CP032446.1|AYB82371.1|996119_996431_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>CP032446.1|AYB82372.1|996449_997160_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLTISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>CP032446.1|AYB82373.1|997159_997639_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRISYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>CP032446.1|AYB82374.1|997635_998685_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>CP032446.1|AYB82375.1|998665_999427_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP032446_1	1.2\|974804\|32\|CP032446\|PILER-CR	974804-974835	32	MG592432	Vibrio phage 1.050.O._10N.286.48.A6, partial genome	21687-21718	8	0.75
CP032446_1	1.2\|974804\|32\|CP032446\|PILER-CR	974804-974835	32	MG592431	Vibrio phage 1.049.O._10N.286.54.B5, partial genome	21426-21457	8	0.75
CP032446_1	1.2\|974804\|32\|CP032446\|PILER-CR	974804-974835	32	NC_047790	Pseudoalteromonas phage C5a, complete genome	34441-34472	9	0.719

1. spacer 1.2|974804|32|CP032446|PILER-CR matches to MG592432 (Vibrio phage 1.050.O._10N.286.48.A6, partial genome) position: , mismatch: 8, identity: 0.75

ctgccggtctgtgctgttgtcgtcaataatca	CRISPR spacer
aatctgctctgtgctgttgtagtcaattataa	Protospacer
   *.* ************* ****** ** *

2. spacer 1.2|974804|32|CP032446|PILER-CR matches to MG592431 (Vibrio phage 1.049.O._10N.286.54.B5, partial genome) position: , mismatch: 8, identity: 0.75

ctgccggtctgtgctgttgtcgtcaataatca	CRISPR spacer
aatctgctctgtgctgttgtagtcaattataa	Protospacer
   *.* ************* ****** ** *

3. spacer 1.2|974804|32|CP032446|PILER-CR matches to NC_047790 (Pseudoalteromonas phage C5a, complete genome) position: , mismatch: 9, identity: 0.719

ctgccggtctgtgctgttgtcgtcaataatca	CRISPR spacer
tttggtgtctgtgccgttttcgtcaataagct	Protospacer
.*    ********.*** ********** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1152432 : 1245952

Salmonella_phage(75.56%)

plate,transposase,tail,capsid,tRNA,head,integrase,portal,lysis

attL 1155469:1155484|attR 1168736:1168751

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB82529.1\|1152432_1153543_+\|transposase	IS3-like element IS1351 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.6e-07	25.6
AYB82530.1\|1154339_1155143_-	DUF3800 domain-containing protein	Q19UP3	Mannheimia_phage	1.2e-62	44.7
1155469:1155484	attL	NA	NA	NA	NA
AYB82531.1\|1155541_1156135_-	hypothetical protein	NA	NA	NA	NA
AYB82532.1\|1156394_1157420_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	9.2e-201	99.1
AYB82533.1\|1157423_1158056_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.1e-66	58.6
AYB82534.1\|1158172_1158412_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	8.8e-38	98.7
AYB82535.1\|1158965_1159199_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	3.6e-12	59.1
AYB82536.1\|1159146_1159605_-	hypothetical protein	NA	NA	NA	NA
AYB82537.1\|1159824_1160166_+	hypothetical protein	E5G6L5	Salmonella_phage	4.2e-49	85.0
AYB82538.1\|1160233_1160467_+	DUF2732 domain-containing protein	A0A1S6L021	Salmonella_phage	2.0e-26	84.4
AYB82539.1\|1160466_1160694_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	1.3e-35	93.3
AYB82540.1\|1160690_1161548_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.5e-164	99.6
AYB82541.1\|1161544_1163941_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	93.9
AYB82542.1\|1164096_1164285_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.7e-26	100.0
AYB82543.1\|1164353_1164653_-	hypothetical protein	NA	NA	NA	NA
AYB82544.1\|1164763_1165570_-	hypothetical protein	A0A2H4J8D6	uncultured_Caudovirales_phage	6.2e-51	49.8
AYB82545.1\|1166062_1167217_+	DUF262 domain-containing protein	NA	NA	NA	NA
AYB82546.1\|1167996_1169028_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	5.0e-170	87.0
1168736:1168751	attR	NA	NA	NA	NA
AYB82547.1\|1169027_1170794_-	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.3
AYB82548.1\|1170936_1171770_+\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	5.9e-121	84.5
AYB82549.1\|1171786_1172845_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	4.9e-181	93.1
AYB82550.1\|1172848_1173499_+	hypothetical protein	E5G6M7	Salmonella_phage	8.7e-112	96.3
AYB82551.1\|1173594_1174059_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
AYB82552.1\|1174058_1174262_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	1.4e-31	92.5
AYB82553.1\|1174265_1174481_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
AYB85904.1\|1174500_1174974_+	lysozyme	E5G6N1	Salmonella_phage	3.7e-80	91.0
AYB82554.1\|1174975_1175353_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	5.1e-16	39.2
AYB82555.1\|1175349_1175778_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.3e-47	76.1
AYB82556.1\|1175707_1175911_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	8.9e-23	73.1
AYB82557.1\|1175873_1176305_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.7
AYB82558.1\|1176297_1176744_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	3.1e-60	81.1
AYB82559.1\|1176770_1177637_-	hypothetical protein	NA	NA	NA	NA
AYB82560.1\|1177732_1178311_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.8e-92	86.5
AYB82561.1\|1178307_1178667_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	3.5e-54	91.5
AYB85905.1\|1179553_1180159_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	1.3e-117	100.0
AYB82562.1\|1180155_1181841_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	3.5e-128	50.6
AYB82563.1\|1181843_1182371_+\|tail	tail fiber assembly protein	NA	NA	NA	NA
AYB82564.1\|1182501_1183674_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-222	99.5
AYB82565.1\|1183683_1184199_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.7e-92	99.4
AYB82566.1\|1184253_1184556_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	9.4e-45	99.0
AYB82567.1\|1184570_1184690_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	8.8e-15	97.4
AYB82568.1\|1187485_1187971_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.3e-67	99.2
AYB82569.1\|1187967_1189068_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	9.0e-194	98.6
AYB85906.1\|1189136_1189355_+	levansucrase regulator	Q53ZE7	Salmonella_virus	2.1e-38	100.0
AYB85907.1\|1189906_1191070_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
AYB82570.1\|1193249_1194659_-	type I secretion protein TolC	NA	NA	NA	NA
AYB82571.1\|1194723_1205943_-	biofilm-associated protein BapA	NA	NA	NA	NA
AYB85908.1\|1206557_1207040_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	5.2e-29	47.4
AYB82572.1\|1207189_1207666_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
AYB82573.1\|1207655_1207946_+	RnfH family protein	NA	NA	NA	NA
AYB82574.1\|1208111_1208450_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
AYB82575.1\|1208598_1210260_-	DNA repair protein RecN	NA	NA	NA	NA
AYB85910.1\|1210345_1211224_-	NAD(+) kinase	NA	NA	NA	NA
AYB85909.1\|1211347_1211938_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
AYB82576.1\|1211972_1212578_-	cytoplasmic protein	NA	NA	NA	NA
AYB82577.1\|1212698_1213940_-	DUF21 domain-containing protein	NA	NA	NA	NA
AYB82578.1\|1214004_1214796_-	inner membrane protein YpjD	NA	NA	NA	NA
AYB82579.1\|1214741_1215038_-	hypothetical protein	NA	NA	NA	NA
AYB82580.1\|1214961_1216323_+	signal recognition particle protein	NA	NA	NA	NA
AYB82581.1\|1216575_1216824_+	30S ribosomal protein S16	NA	NA	NA	NA
AYB82582.1\|1216842_1217391_+	ribosome maturation factor RimM	NA	NA	NA	NA
AYB82583.1\|1217435_1218203_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
AYB82584.1\|1218243_1218591_+	50S ribosomal protein L19	NA	NA	NA	NA
AYB82585.1\|1218748_1219969_-	diguanylate cyclase	A0A2K8I9Y5	Pseudomonas_phage	5.8e-08	36.2
AYB82586.1\|1219961_1220480_-	YfiR family protein	NA	NA	NA	NA
AYB82587.1\|1220919_1221990_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	2.4e-90	51.8
AYB82588.1\|1221999_1223121_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
AYB82589.1\|1223178_1224087_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
AYB82590.1\|1224047_1225208_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
AYB85911.1\|1225307_1225355_-	hypothetical protein	NA	NA	NA	NA
AYB82591.1\|1225458_1225797_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
AYB82592.1\|1226068_1226806_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
AYB82593.1\|1226937_1227918_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA
AYB82594.1\|1227914_1228646_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
AYB82595.1\|1228775_1231349_+	chaperone protein ClpB	H6X3M6	Enterobacteria_phage	2.6e-127	35.5
AYB82596.1\|1237129_1237585_+	DUF4385 domain-containing protein	E3SMI8	Prochlorococcus_phage	3.0e-34	50.0
AYB82597.1\|1237688_1238990_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.8e-44	30.6
AYB82598.1\|1238986_1239310_-	YfiM family lipoprotein	NA	NA	NA	NA
AYB82599.1\|1239354_1240710_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
AYB82600.1\|1240824_1243485_-	protein lysine acetyltransferase Pat	NA	NA	NA	NA
AYB82601.1\|1243538_1244219_-	DTW domain-containing protein	NA	NA	NA	NA
AYB82602.1\|1244291_1244711_-	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.2e-16	40.6
AYB82603.1\|1244914_1245952_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_2

1481307 : 1487346

Salmonella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB82796.1\|1481307_1481538_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	5.4e-08	68.6
AYB82797.1\|1481476_1481620_+	hypothetical protein	A0A1R3Y5S2	Salmonella_virus	1.7e-12	82.9
AYB82798.1\|1482609_1484532_-	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	8.1e-299	76.9
AYB82799.1\|1484549_1484804_-	glycosyltransferase	A8CG95	Salmonella_phage	3.1e-25	79.5
AYB85918.1\|1484772_1485162_-	GtrA family protein	A0A192Y6N5	Salmonella_phage	1.1e-50	85.6
AYB82800.1\|1486404_1487346_-	hypothetical protein	E7DYY8	Enterobacteria_phage	1.6e-146	87.8

DBSCAN-SWA_3

1723551 : 1732722

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB83017.1\|1723551_1724499_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.8
AYB83018.1\|1724482_1725214_+	ABC transporter permease	NA	NA	NA	NA
AYB83019.1\|1725194_1725302_-	protein YohO	NA	NA	NA	NA
AYB83020.1\|1725361_1726093_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	2.2e-100	87.4
AYB83021.1\|1726315_1728001_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.4e-278	91.1
AYB83022.1\|1727997_1728717_+	DNA-binding response regulator	NA	NA	NA	NA
AYB83023.1\|1728763_1729231_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	8.8e-74	89.7
AYB83024.1\|1729287_1729818_-	DUF1307 domain-containing protein	NA	NA	NA	NA
AYB83025.1\|1729989_1730448_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	7.1e-52	71.2
AYB83026.1\|1730688_1732722_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	2.1e-55	26.9

DBSCAN-SWA_4

1799918 : 1810425

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB83077.1\|1799918_1801322_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	4.0e-21	26.5
AYB83078.1\|1801499_1802393_+	UTP--glucose-1-phosphate uridylyltransferase	A0A127AW70	Bacillus_phage	4.8e-44	42.2
AYB83079.1\|1802769_1803855_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.6e-102	53.9
AYB83080.1\|1803854_1804754_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.1e-30	36.0
AYB83081.1\|1804801_1805680_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.1e-108	65.5
AYB83082.1\|1805680_1806232_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.5e-52	57.5
AYB83083.1\|1806237_1807212_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
AYB83084.1\|1807227_1808001_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
AYB83085.1\|1808005_1809085_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	1.3e-16	24.5
AYB83086.1\|1809111_1810425_+	LPS biosynthesis protein	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_5

1923352 : 1969563

Salmonella_phage(84.91%)

plate,tail,transposase,capsid,head,terminase,holin,integrase

attL 1921324:1921338|attR 1941644:1941658

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1921324:1921338	attL	NA	NA	NA	NA
AYB85933.1\|1923352_1924627_-	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	8.2e-74	40.1
AYB83197.1\|1924982_1925780_-	protein MtfA	NA	NA	NA	NA
AYB83198.1\|1926071_1927061_-\|integrase	integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
AYB83199.1\|1927062_1927305_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	2.1e-39	98.8
AYB83200.1\|1927329_1927899_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	5.8e-104	91.0
AYB83201.1\|1927895_1928645_-	hypothetical protein	H6WRY2	Salmonella_phage	1.1e-46	83.6
AYB83202.1\|1928648_1929122_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	5.0e-69	80.3
AYB83203.1\|1929121_1929859_-	ead/Ea22-like family protein	A0A0M5M1J9	Salmonella_phage	1.8e-52	86.3
AYB83204.1\|1929929_1930469_-	HD family hydrolase	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
AYB83205.1\|1930605_1931433_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	1.0e-149	97.5
AYB83206.1\|1931490_1931862_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
AYB83207.1\|1932398_1932644_+	hypothetical protein	NA	NA	NA	NA
AYB83208.1\|1932561_1932858_-	hypothetical protein	Q8SBF7	Shigella_phage	1.1e-50	98.0
AYB83209.1\|1932838_1933090_-	hypothetical protein	NA	NA	NA	NA
AYB83210.1\|1933017_1933203_-	hypothetical protein	A0A1C9II97	Salmonella_phage	1.2e-13	73.3
AYB83211.1\|1933407_1934103_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	4.6e-127	99.6
AYB83212.1\|1934076_1934262_+	amino acid permease	NA	NA	NA	NA
AYB83213.1\|1934200_1934425_+	XRE family transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
AYB83214.1\|1934453_1935008_+	hypothetical protein	A0A1C9II13	Salmonella_phage	5.9e-101	99.5
AYB83215.1\|1935004_1936147_+	peptidase	A0A1C9IHV9	Salmonella_phage	1.6e-182	87.6
AYB83216.1\|1936143_1936368_+	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
AYB83217.1\|1936364_1937339_+	hypothetical protein	A0A1C9IHW0	Salmonella_phage	1.2e-165	98.1
AYB83218.1\|1937335_1937809_+	PerC family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	6.6e-53	93.8
AYB83219.1\|1937805_1938687_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.1e-170	99.3
AYB83220.1\|1938695_1939085_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	4.9e-70	100.0
AYB83221.1\|1939056_1939962_+	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	2.8e-161	99.0
AYB85934.1\|1939969_1940959_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	3.0e-188	97.0
AYB83222.1\|1940972_1941725_+	antitermination protein	A0A192Y5X6	Salmonella_phage	2.4e-134	92.0
1941644:1941658	attR	NA	NA	NA	NA
AYB83223.1\|1941756_1941945_+	hypothetical protein	NA	NA	NA	NA
AYB83224.1\|1942013_1942256_+	hypothetical protein	NA	NA	NA	NA
AYB83225.1\|1942387_1942741_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.0e-50	88.7
AYB83226.1\|1942744_1943221_+	lysozyme	Q8SBE0	Shigella_phage	1.7e-85	96.8
AYB83227.1\|1943204_1943597_+	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	1.6e-57	92.3
AYB83228.1\|1943481_1943754_+	peptidase	Q8SBD8	Shigella_phage	3.8e-29	77.6
AYB83229.1\|1944122_1944557_+	hypothetical protein	NA	NA	NA	NA
AYB83230.1\|1944684_1945035_+	HNH endonuclease	M1FQV2	Enterobacteria_phage	8.0e-64	97.4
AYB83231.1\|1945152_1945656_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	3.6e-89	100.0
AYB83232.1\|1945652_1947386_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	99.8
AYB83233.1\|1947397_1947580_+	hypothetical protein	Q8HAD5	Salmonella_phage	2.2e-25	98.3
AYB83234.1\|1949462_1950668_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.6e-223	100.0
AYB83235.1\|1950718_1950919_+	hypothetical protein	Q8HAD1	Salmonella_phage	1.4e-28	100.0
AYB83236.1\|1950921_1951245_+\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
AYB83237.1\|1951241_1951646_+\|head,tail	head-tail adaptor protein	A0A192Y6C2	Salmonella_phage	5.4e-72	99.3
AYB83238.1\|1951617_1952130_+	hypothetical protein	Q8HAC8	Salmonella_phage	4.6e-92	100.0
AYB83239.1\|1952126_1952687_+	hypothetical protein	Q8HAC7	Salmonella_phage	8.8e-105	99.5
AYB83240.1\|1952690_1952855_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	1.0e-24	100.0
AYB83241.1\|1952844_1954341_+\|tail	phage tail protein	Q8HAC5	Salmonella_phage	6.1e-278	99.8
AYB83242.1\|1954340_1954697_+\|tail	phage tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
AYB83243.1\|1954693_1955020_+\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
AYB83244.1\|1955104_1957033_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.7
AYB83245.1\|1957066_1958407_+	DNA circularization protein	A0A192Y5U9	Salmonella_phage	5.7e-251	99.6
AYB83246.1\|1958403_1959468_+\|plate	baseplate protein	Q8HAC0	Salmonella_phage	4.2e-188	95.1
AYB83247.1\|1959460_1959994_+\|plate	phage baseplate assembly protein V	Q8HAB9	Salmonella_phage	1.4e-96	100.0
AYB83248.1\|1959998_1960412_+	hypothetical protein	Q8HAB8	Salmonella_phage	1.1e-75	100.0
AYB83249.1\|1960404_1961484_+\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	2.5e-204	99.7
AYB83250.1\|1961486_1962074_+	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
AYB83251.1\|1962060_1963623_+\|tail	phage tail protein	Q8HAB4	Salmonella_phage	2.6e-287	100.0
AYB83252.1\|1963622_1964192_+\|tail	tail fiber assembly protein	Q8HAB3	Salmonella_phage	7.3e-107	100.0
AYB83253.1\|1964476_1965484_-	type III secretion system effector arginine glycosyltransferase	Q8HAB2	Salmonella_phage	7.9e-197	100.0
AYB83254.1\|1965696_1965918_+	DNA-binding protein	Q8HAB1	Salmonella_phage	1.2e-36	100.0
AYB83255.1\|1966281_1966464_+	hypothetical protein	NA	NA	NA	NA
AYB83256.1\|1966856_1967234_+	hypothetical protein	NA	NA	NA	NA
AYB83257.1\|1967260_1968079_+	hypothetical protein	NA	NA	NA	NA
AYB83258.1\|1968540_1969563_+\|transposase	IS110-like element ISSaen1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

2661752 : 2718657

Moraxella_phage(16.67%)

protease,tail,integrase,tRNA

attL 2691535:2691550|attR 2717139:2717154

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB83921.1\|2661752_2662448_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
AYB83922.1\|2662505_2664416_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	4.5e-92	32.7
AYB83923.1\|2664546_2664891_+	RidA family protein	NA	NA	NA	NA
AYB83924.1\|2664896_2665076_-	YoaH family protein	NA	NA	NA	NA
AYB83925.1\|2665156_2666521_+	aminodeoxychorismate synthase component 1	A0A0B5J984	Pandoravirus	3.6e-43	34.5
AYB83926.1\|2666524_2667103_+	coenzyme A pyrophosphatase	NA	NA	NA	NA
AYB83927.1\|2667366_2668731_+	L-serine ammonia-lyase	NA	NA	NA	NA
AYB83928.1\|2668868_2670470_+	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
AYB83929.1\|2670491_2672051_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	9.5e-40	44.4
AYB83930.1\|2672038_2672374_-	hypothetical protein	NA	NA	NA	NA
AYB83931.1\|2672523_2673492_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
AYB83932.1\|2673544_2674345_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
AYB83933.1\|2674357_2675209_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
AYB83934.1\|2675267_2675726_+	DUF986 domain-containing protein	NA	NA	NA	NA
AYB85963.1\|2676081_2676702_+	manganese efflux pump MntP	NA	NA	NA	NA
AYB83935.1\|2676698_2677508_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
AYB83936.1\|2677573_2679319_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
AYB83937.1\|2679538_2679748_-	cold-shock protein CspC	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
AYB83938.1\|2679760_2679904_-	DUF2627 domain-containing protein	NA	NA	NA	NA
AYB83939.1\|2680552_2680840_-	hypothetical protein	NA	NA	NA	NA
AYB83940.1\|2680910_2681054_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
AYB83941.1\|2681211_2681451_+	hypothetical protein	NA	NA	NA	NA
AYB83942.1\|2681662_2682454_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
AYB83943.1\|2682629_2684003_+	MFS transporter	NA	NA	NA	NA
AYB83944.1\|2684050_2684932_-\|protease	protease HtpX	NA	NA	NA	NA
AYB83945.1\|2685124_2687173_-\|tail,protease	tail-specific protease	A0A0R6PIZ1	Moraxella_phage	8.0e-87	33.5
AYB83946.1\|2687192_2687879_-	RNA chaperone ProQ	NA	NA	NA	NA
AYB83947.1\|2687976_2688561_-	GAF domain-containing protein	NA	NA	NA	NA
AYB83948.1\|2688602_2689886_+	paraquat-inducible protein A	NA	NA	NA	NA
AYB83949.1\|2689848_2692488_+	PqiB family protein	NA	NA	NA	NA
2691535:2691550	attL	NA	NA	NA	NA
AYB85964.1\|2692565_2694005_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
AYB83950.1\|2694119_2694359_+	DUF1480 family protein	NA	NA	NA	NA
AYB83951.1\|2694469_2694661_+	DUF1482 family protein	NA	NA	NA	NA
AYB83952.1\|2694679_2695330_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	7.2e-58	50.9
AYB83953.1\|2695553_2695718_-	hypothetical protein	NA	NA	NA	NA
AYB83954.1\|2696002_2696725_-	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA
AYB83955.1\|2697408_2697750_+	DUF1398 domain-containing protein	NA	NA	NA	NA
AYB83956.1\|2698131_2698608_+	hypothetical protein	NA	NA	NA	NA
AYB83957.1\|2698980_2699400_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
AYB83958.1\|2699528_2699723_-	hypothetical protein	NA	NA	NA	NA
AYB83959.1\|2699769_2700039_+	hypothetical protein	Q6UAV5	Klebsiella_phage	1.5e-06	39.0
AYB83960.1\|2700204_2700345_+	hypothetical protein	NA	NA	NA	NA
AYB85965.1\|2702653_2702854_-	hypothetical protein	NA	NA	NA	NA
AYB83961.1\|2704520_2704679_+	hypothetical protein	NA	NA	NA	NA
AYB83962.1\|2704688_2705303_+	disulfide bond formation protein B	NA	NA	NA	NA
AYB83963.1\|2706055_2706322_-	hypothetical protein	NA	NA	NA	NA
AYB83964.1\|2706450_2706576_-	arsenic transporter	NA	NA	NA	NA
AYB83965.1\|2706837_2706942_+\|tail	phage tail protein	NA	NA	NA	NA
AYB83966.1\|2707143_2707344_+	phage virulence factor	NA	NA	NA	NA
AYB83967.1\|2708802_2708994_+	hypothetical protein	NA	NA	NA	NA
AYB83968.1\|2709058_2709226_+	lytic enzyme	NA	NA	NA	NA
AYB83969.1\|2709482_2710016_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	3.2e-11	43.0
AYB83970.1\|2710012_2710300_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.6e-38	93.9
AYB83971.1\|2711433_2712513_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.1e-98	52.0
AYB83972.1\|2713466_2714267_+	hypothetical protein	NA	NA	NA	NA
AYB83973.1\|2714746_2715469_+	guanine nucleotide exchange factor SopE	NA	NA	NA	NA
AYB83974.1\|2715670_2716240_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.4e-96	90.5
AYB83975.1\|2716239_2718657_-\|tail	phage tail protein	A0A0K2FIZ6	Escherichia_phage	4.7e-86	62.8
2717139:2717154	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2723022 : 2760283

Enterobacteria_phage(26.47%)

tail,protease,integrase,holin,portal,lysis

attL 2712514:2712573|attR 2760284:2760448

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2712514:2712573	attL	NA	NA	NA	NA
AYB83978.1\|2723022_2723754_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.0e-113	75.6
AYB83979.1\|2723763_2724459_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.0e-89	66.7
AYB83980.1\|2724548_2725082_+	superoxide dismutase [Cu-Zn] SodC1	Q9MC02	Salmonella_phage	1.8e-46	54.0
AYB83981.1\|2725198_2725696_-	Ail/OmpX	A0A1B0VBR9	Salmonella_phage	1.4e-16	35.9
AYB83982.1\|2725794_2726127_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	2.6e-35	61.5
AYB85966.1\|2726123_2729111_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	2.8e-266	62.1
AYB83983.1\|2729190_2729520_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
AYB83984.1\|2729516_2729915_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	8.6e-30	56.8
AYB83985.1\|2729960_2730710_-\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	4.8e-90	68.6
AYB83986.1\|2730721_2731123_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	2.0e-42	60.9
AYB83987.1\|2731119_2731686_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	2.1e-13	95.7
AYB83988.1\|2731666_2731966_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
AYB83989.1\|2731958_2732282_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
AYB85967.1\|2734376_2735894_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	4.9e-174	64.7
AYB83990.1\|2735920_2736127_-	primosomal replication protein PriB/PriC domain protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
AYB83991.1\|2738217_2738751_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	7.8e-34	48.1
AYB85969.1\|2738958_2739438_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
AYB83992.1\|2739455_2739908_-	lysozyme	A0A0M4R365	Salmonella_phage	2.3e-79	97.3
AYB85968.1\|2739891_2740221_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
AYB83993.1\|2740496_2741183_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	1.8e-131	99.6
AYB83994.1\|2741543_2741993_+	hypothetical protein	NA	NA	NA	NA
AYB85970.1\|2742366_2742891_-	hypothetical protein	NA	NA	NA	NA
AYB83995.1\|2742987_2743677_-	antiterminator	I6PDF8	Cronobacter_phage	2.1e-60	54.9
AYB83996.1\|2743806_2744034_-	DNA breaking-rejoining protein	A0A0M4RU10	Salmonella_phage	2.2e-14	66.7
AYB83997.1\|2744030_2744630_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	4.7e-96	82.9
AYB83998.1\|2744693_2744999_-	hypothetical protein	NA	NA	NA	NA
AYB83999.1\|2745421_2745613_+	hypothetical protein	NA	NA	NA	NA
AYB84000.1\|2745630_2747610_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	1.9e-162	46.3
AYB84001.1\|2748006_2749137_+	GGDEF domain-containing protein	NA	NA	NA	NA
AYB84002.1\|2749423_2749819_-	DUF977 family protein	A0A088CBK9	Shigella_phage	9.8e-18	38.8
AYB84003.1\|2749831_2750293_-	replication protein	A0A0U2JGJ0	Escherichia_phage	3.5e-67	75.5
AYB84004.1\|2750285_2751284_-	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	4.1e-121	67.3
AYB84005.1\|2751330_2751825_-	hypothetical protein	NA	NA	NA	NA
AYB84006.1\|2751811_2752066_-	XRE family transcriptional regulator	K7PKH4	Enterobacteria_phage	5.3e-17	60.9
AYB84007.1\|2752164_2752563_+	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	1.2e-18	56.0
AYB84008.1\|2752965_2753232_+	hypothetical protein	NA	NA	NA	NA
AYB84009.1\|2753580_2753856_+	hypothetical protein	NA	NA	NA	NA
AYB84010.1\|2753859_2754066_+	cell division inhibitor protein	I6PBM9	Cronobacter_phage	3.0e-10	45.6
AYB84011.1\|2754141_2754477_+	hypothetical protein	NA	NA	NA	NA
AYB84012.1\|2754617_2757308_+	exodeoxyribonuclease VIII	Q9QF34	Lambdoid_phage	4.0e-118	72.8
AYB84013.1\|2757300_2758131_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	2.5e-103	71.6
AYB84014.1\|2758177_2758363_+	DUF1187 family protein	NA	NA	NA	NA
AYB85971.1\|2758653_2758890_+	hypothetical protein	NA	NA	NA	NA
AYB84015.1\|2758950_2759229_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.8e-10	37.5
AYB84016.1\|2759203_2760283_+\|integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.5e-100	52.5
2760284:2760448	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2862381 : 2872089

Burkholderia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB84123.1\|2862381_2864094_-	cellulose synthesis regulatory protein	A0A127AWB9	Bacillus_phage	1.6e-19	37.4
AYB84124.1\|2864258_2864504_-	DUF2158 domain-containing protein	NA	NA	NA	NA
AYB84125.1\|2864520_2865438_-	DUF808 domain-containing protein	NA	NA	NA	NA
AYB84126.1\|2865607_2866528_+	drug/metabolite exporter YedA	NA	NA	NA	NA
AYB84127.1\|2866516_2866987_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	1.2e-30	46.9
AYB84128.1\|2866967_2868398_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.8e-105	57.4
AYB84129.1\|2868471_2869167_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
AYB84130.1\|2869246_2869558_-	hypothetical protein	NA	NA	NA	NA
AYB84131.1\|2870207_2870765_+	porin	Q1MVN1	Enterobacteria_phage	2.0e-64	68.4
AYB84132.1\|2871020_2871419_+	hypothetical protein	Q1MVN1	Enterobacteria_phage	2.7e-31	55.0
AYB85977.1\|2871677_2871866_-	cold-shock protein	NA	NA	NA	NA
AYB84133.1\|2871876_2872089_-	cold-shock protein CspJ	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0

DBSCAN-SWA_9

2957007 : 3000970

Escherichia_phage(33.33%)

protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB84213.1\|2957007_2957688_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	1.6e-84	72.4
AYB84214.1\|2958326_2958986_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
AYB84215.1\|2959072_2959402_+	sulfurtransferase TusE	NA	NA	NA	NA
AYB84216.1\|2959398_2959680_-	acylphosphatase	NA	NA	NA	NA
AYB84217.1\|2959728_2960508_-	AraC family transcriptional regulator	NA	NA	NA	NA
AYB84218.1\|2960533_2961082_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
AYB84219.1\|2961296_2962508_+	ribosomal RNA large subunit methyltransferase I	NA	NA	NA	NA
AYB84220.1\|2962565_2962883_+	heat-shock protein HspQ	NA	NA	NA	NA
AYB84221.1\|2962927_2963344_-	CoA-binding protein	NA	NA	NA	NA
AYB84222.1\|2963514_2964177_+	DUF2057 family protein	NA	NA	NA	NA
AYB84223.1\|2964271_2964730_+	methylglyoxal synthase	NA	NA	NA	NA
AYB84224.1\|2964765_2966820_-	DNA helicase IV	A7KV33	Bacillus_phage	6.5e-20	27.6
AYB84225.1\|2966943_2967390_+	YccF domain-containing protein	NA	NA	NA	NA
AYB84226.1\|2967408_2969562_+	TIGR01666 family membrane protein	NA	NA	NA	NA
AYB84227.1\|2969548_2970154_-	DNA transformation protein	NA	NA	NA	NA
AYB84228.1\|2970370_2970880_+	cell division inhibitor SulA	NA	NA	NA	NA
AYB85980.1\|2971236_2972289_+	outer membrane protein A	NA	NA	NA	NA
AYB84229.1\|2972360_2972813_-	macrodomain Ter protein	NA	NA	NA	NA
AYB84230.1\|2972998_2974759_+\|protease	Lon protease family protein	NA	NA	NA	NA
AYB84231.1\|2974827_2975346_+	beta-hydroxydecanoyl-ACP dehydratase	NA	NA	NA	NA
AYB84232.1\|2975445_2975613_-	ribosome modulation factor	NA	NA	NA	NA
AYB84233.1\|2975868_2976432_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
AYB84234.1\|2976428_2978069_-	intermembrane transport protein PqiB	NA	NA	NA	NA
AYB84235.1\|2978073_2979327_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
AYB84236.1\|2979341_2981249_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
AYB84237.1\|2981261_2983370_-	ribosomal RNA large subunit methyltransferase K/L	NA	NA	NA	NA
AYB84238.1\|2983468_2984578_+	MOSC domain-containing protein	NA	NA	NA	NA
AYB84239.1\|2984574_2985117_-	cell division protein ZapC	NA	NA	NA	NA
AYB84240.1\|2985282_2986293_-	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA
AYB84241.1\|2986500_2989113_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.8
AYB84242.1\|2989539_2989731_+	DinI family protein	S4TNM0	Salmonella_phage	1.8e-25	93.7
AYB84243.1\|2990001_2990688_+	virulence protein	NA	NA	NA	NA
AYB84244.1\|2991047_2991674_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
AYB84245.1\|2992321_2993290_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	3.3e-192	99.1
AYB84246.1\|2993515_2993764_+\|tail	phage tail protein	A0A1B0VCD0	Salmonella_phage	2.1e-18	66.2
AYB84247.1\|2993767_2994349_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
AYB84248.1\|2994348_2996058_-\|tail	tail fiber protein	A0A0U2SAV1	Escherichia_phage	1.5e-91	66.0
AYB84249.1\|2996054_2996681_-	hypothetical protein	A0A0U2RK03	Escherichia_phage	3.3e-92	71.6
AYB84250.1\|2996664_2997891_-	hypothetical protein	A0A0U2RJZ0	Escherichia_phage	3.2e-147	63.6
AYB84251.1\|2997887_2998220_-	hypothetical protein	NA	NA	NA	NA
AYB84252.1\|2998216_2998933_-	hypothetical protein	NA	NA	NA	NA
AYB84253.1\|2998929_2999982_-	hypothetical protein	NA	NA	NA	NA
AYB84254.1\|2999981_3000257_-	hypothetical protein	A0A0U2JGJ3	Escherichia_phage	1.6e-06	33.3
AYB84255.1\|3000472_3000970_-	hypothetical protein	A0A0U2JGI7	Escherichia_phage	8.9e-24	38.0

DBSCAN-SWA_10

3007911 : 3033545

Salmonella_phage(72.41%)

holin,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYB84263.1\|3007911_3008943_-	DUF2184 domain-containing protein	A0A0U2QQI2	Escherichia_phage	2.5e-73	45.2
AYB84264.1\|3008960_3009833_-	hypothetical protein	NA	NA	NA	NA
AYB84265.1\|3009853_3011428_-	NUDIX hydrolase	Q6UJ14	Burkholderia_virus	2.2e-20	48.6
AYB84266.1\|3011428_3012304_-	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.5e-55	45.5
AYB84267.1\|3012275_3013706_-	DUF1073 domain-containing protein	A0A0U2S5X9	Escherichia_phage	2.6e-92	37.9
AYB84268.1\|3013705_3014977_-	hypothetical protein	A0A0U2JTW9	Escherichia_phage	1.1e-83	38.3
AYB84269.1\|3014966_3015941_-\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	1.6e-29	37.3
AYB84270.1\|3016002_3016416_-	hypothetical protein	NA	NA	NA	NA
AYB84271.1\|3016405_3016957_-	DUF2514 domain-containing protein	NA	NA	NA	NA
AYB84272.1\|3016953_3017568_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	1.2e-107	94.1
AYB84273.1\|3017570_3017918_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.3e-45	80.4
AYB84274.1\|3018316_3019114_-	antitermination protein	A0A0M4S661	Salmonella_phage	4.4e-150	99.2
AYB84275.1\|3019103_3019250_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
AYB84276.1\|3019246_3019858_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
AYB84277.1\|3019860_3020067_-	hypothetical protein	S4TNP0	Salmonella_phage	3.5e-35	100.0
AYB84278.1\|3020066_3020669_-	DUF1367 family protein	S4TTI0	Salmonella_phage	2.8e-109	99.0
AYB84279.1\|3020708_3021014_-	hypothetical protein	H6WRY6	Salmonella_phage	9.8e-42	100.0
AYB84280.1\|3021003_3021243_-	DinI family protein	H6WRY5	Salmonella_phage	3.9e-38	100.0
AYB84281.1\|3021398_3021665_-	hypothetical protein	S4TNF2	Salmonella_phage	1.5e-46	100.0
AYB84282.1\|3021758_3022331_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	1.3e-66	68.0
AYB84283.1\|3022334_3022808_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	4.7e-67	79.5
AYB84284.1\|3022807_3023332_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	1.8e-91	99.4
AYB84285.1\|3023328_3023676_-	DUF977 family protein	H6WRX9	Salmonella_phage	4.8e-53	90.4
AYB84286.1\|3023686_3024436_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
AYB84287.1\|3024438_3025422_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-163	100.0
AYB84288.1\|3025506_3025881_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
AYB84289.1\|3025846_3026083_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.8e-38	100.0
AYB84290.1\|3026212_3026617_+	transcriptional regulator	H6WRX4	Salmonella_phage	7.1e-72	99.3
AYB84291.1\|3027326_3030515_+	DNA breaking-rejoining protein	S4TNL0	Salmonella_phage	0.0e+00	74.0
AYB84292.1\|3031679_3031919_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
AYB84293.1\|3031959_3032208_+	excisionase	S4TND0	Salmonella_phage	4.7e-42	100.0
AYB84294.1\|3032252_3033545_+	DUF3596 domain-containing protein	S4TSP2	Salmonella_phage	1.3e-252	99.8

DBSCAN-SWA_11

3104513 : 3111826

Ralstonia_phage(16.67%)

protease,integrase

attL 3099569:3099583|attR 3110562:3110576

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3099569:3099583	attL	NA	NA	NA	NA
AYB84346.1\|3104513_3104891_+\|integrase	integrase	A0A077KET4	Ralstonia_phage	1.2e-20	41.0
AYB84347.1\|3105052_3105250_+	hypothetical protein	NA	NA	NA	NA
AYB84348.1\|3105462_3107739_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
AYB84349.1\|3107769_3108090_-\|protease	ATP-dependent Clp protease adaptor ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
AYB84350.1\|3108413_3108635_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
AYB84351.1\|3108764_3110711_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.0e-39	41.9
3110562:3110576	attR	NA	NA	NA	NA
AYB84352.1\|3110707_3111826_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	8.1e-09	38.9

DBSCAN-SWA_12

3449284 : 3494921

Salmonella_phage(71.64%)

coat,tail,protease,integrase,terminase,holin,portal,lysis

attL 3448951:3448991|attR 3494939:3494979

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3448951:3448991	attL	NA	NA	NA	NA
AYB84648.1\|3449284_3449647_+	GtrA family protein	I1TED9	Salmonella_phage	3.9e-61	100.0
AYB84649.1\|3449643_3450570_+	glycosyltransferase	I1TED8	Salmonella_phage	1.4e-168	96.7
AYB84650.1\|3450550_3452203_+	hypothetical protein	B9UDL6	Salmonella_phage	1.5e-83	38.0
AYB84651.1\|3453686_3454049_+	GtrA family protein	A0A192Y6N5	Salmonella_phage	5.0e-61	100.0
AYB84652.1\|3454045_3454978_+	glycosyltransferase	A8CG95	Salmonella_phage	5.5e-176	100.0
AYB84653.1\|3454967_3456425_+	hypothetical protein	E7C9N7	Salmonella_phage	1.7e-240	99.8
AYB84654.1\|3456483_3458487_-	endorhamnosidase	E7C9U9	Salmonella_phage	0.0e+00	99.9
AYB84655.1\|3458622_3458874_+	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	1.4e-38	100.0
AYB86001.1\|3458973_3459153_+	hypothetical protein	B8K1I9	Salmonella_phage	2.1e-28	100.0
AYB84656.1\|3459166_3459532_-	hypothetical protein	E7C9U7	Salmonella_phage	8.1e-67	100.0
AYB84657.1\|3459562_3459892_+	hypothetical protein	NA	NA	NA	NA
AYB84658.1\|3459909_3461823_-	DNA transfer protein	E7C9U6	Salmonella_phage	0.0e+00	100.0
AYB84659.1\|3461822_3463127_-	acyltransferase	E7C9U5	Salmonella_phage	7.8e-213	96.3
AYB84660.1\|3463137_3463827_-	DNA transfer protein	E7C9U4	Salmonella_phage	1.2e-108	99.6
AYB84661.1\|3463829_3464285_-	DUF2824 family protein	B8K1I4	Salmonella_phage	1.4e-87	100.0
AYB84662.1\|3464284_3464986_-\|tail	phage tail protein	B8K1I3	Salmonella_phage	8.8e-70	98.3
AYB84663.1\|3464989_3466408_-	hypothetical protein	I1TEJ1	Salmonella_phage	3.3e-273	98.3
AYB84664.1\|3466367_3466868_-	hypothetical protein	I1TEJ0	Salmonella_phage	5.5e-90	98.8
AYB84665.1\|3466851_3467412_-	hypothetical protein	C6ZR11	Salmonella_phage	1.4e-102	98.9
AYB84666.1\|3467452_3468745_-\|coat	coat protein	C6ZR10	Salmonella_phage	1.1e-243	99.8
AYB84667.1\|3468744_3469656_-	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	4.9e-161	100.0
AYB84668.1\|3469669_3471847_-\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.3
AYB84669.1\|3471846_3473346_-\|terminase	terminase	A8CGE0	Salmonella_phage	6.9e-306	99.8
AYB84670.1\|3473323_3473812_-	DNA-packaging protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
AYB84671.1\|3473815_3474220_-	Decoration protein	C6ZR73	Salmonella_phage	5.3e-67	100.0
AYB84672.1\|3474219_3474609_-	hypothetical protein	C6ZR72	Salmonella_phage	1.5e-74	99.2
AYB84673.1\|3474612_3474855_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	1.3e-36	100.0
AYB84674.1\|3475113_3475644_-	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.0e-91	96.6
AYB86002.1\|3475597_3475822_-	hypothetical protein	A0A1V0E5I0	Salmonella_phage	7.2e-26	90.3
AYB84675.1\|3475856_3476327_-\|lysis	lysis protein	H6WRZ5	Salmonella_phage	1.2e-62	87.2
AYB84676.1\|3476323_3476761_-	lysozyme	Q5G8R3	Enterobacteria_phage	6.3e-74	97.9
AYB84677.1\|3476744_3477071_-\|holin	phage holin, lambda family	Q5G8R5	Enterobacteria_phage	1.7e-52	100.0
AYB84678.1\|3477206_3477404_-	hypothetical protein	C6ZR63	Salmonella_phage	5.0e-23	96.2
AYB84679.1\|3477450_3477939_-	DUF1133 family protein	I6S672	Salmonella_phage	3.0e-77	87.0
AYB84680.1\|3478008_3478212_-	protein ninH	A0A075B8J4	Enterobacteria_phage	5.7e-30	94.0
AYB84681.1\|3478208_3478604_-	RusA family crossover junction endodeoxyribonuclease	A0A0M4REJ2	Salmonella_phage	2.9e-70	96.9
AYB84682.1\|3478600_3478897_-	hypothetical protein	A0A0M3ULJ7	Salmonella_phage	7.5e-47	98.9
AYB84683.1\|3478859_3479036_-	NinF family protein	A0A0M4S6T3	Salmonella_phage	1.8e-27	96.6
AYB84684.1\|3479032_3479215_-	NinE family protein	Q716C5	Shigella_phage	1.8e-27	96.7
AYB84685.1\|3479181_3479355_-	protein ninD	C6ZR56	Salmonella_phage	7.0e-29	93.0
AYB84686.1\|3479351_3480224_-	hypothetical protein	I6R0S6	Salmonella_phage	6.1e-169	93.4
AYB84687.1\|3480220_3480679_-	recombination protein NinB	K7PKW7	Enterobacterial_phage	3.0e-79	98.6
AYB84688.1\|3480734_3482111_-	replicative DNA helicase	A0A192Y673	Salmonella_phage	4.8e-253	99.3
AYB84689.1\|3482919_3483066_-	DUF2740 domain-containing protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
AYB84690.1\|3483100_3483382_-	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
AYB84691.1\|3483492_3483708_-	transcriptional regulator	Q76H55	Enterobacteria_phage	1.3e-32	100.0
AYB84692.1\|3483818_3484508_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.3e-126	100.0
AYB84693.1\|3484596_3485520_+	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	1.5e-181	100.0
AYB84694.1\|3485555_3485765_-	fumarate hydratase FumD	I6R0R9	Salmonella_phage	5.5e-28	91.3
AYB84695.1\|3486128_3486461_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	2.2e-55	100.0
AYB84696.1\|3486539_3486740_+	restriction endonuclease	A0A1R3Y5S4	Salmonella_virus	1.0e-31	100.0
AYB84697.1\|3486779_3487079_+	hypothetical protein	A0A1R3Y5U4	Salmonella_virus	3.3e-50	99.0
AYB84698.1\|3487402_3487543_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	Q776Q5	Enterobacteria_phage	2.0e-18	84.8
AYB84699.1\|3487535_3487649_+	host cell division inhibitory peptide Kil	C6ZR39	Salmonella_phage	7.8e-13	100.0
AYB84700.1\|3487645_3487834_+	hypothetical protein	C6ZR38	Salmonella_phage	1.3e-28	100.0
AYB84701.1\|3487842_3488550_+	recombinase	E7C9Q0	Salmonella_phage	9.7e-125	89.8
AYB84702.1\|3488550_3489057_+	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	3.8e-91	98.8
AYB84703.1\|3489065_3489614_+	3'-5' exoribonuclease	C6ZR35	Salmonella_phage	2.1e-106	100.0
AYB84704.1\|3489629_3489923_+	DUF2856 family protein	A0A1V0E5L7	Salmonella_phage	5.5e-50	100.0
AYB84705.1\|3489933_3490104_+	DUF2737 family protein	I6S642	Salmonella_phage	6.1e-25	100.0
AYB84706.1\|3490100_3490682_+	Eae-like protein	A0A0N6WGF1	Salmonella_phage	5.2e-68	71.5
AYB84707.1\|3491066_3491360_+	hypothetical protein	A0A1V0E5L2	Salmonella_phage	4.2e-50	99.0
AYB84708.1\|3491356_3492439_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	6.5e-80	75.2
AYB84709.1\|3492383_3492713_+	ASCH domain-containing protein	Q9XJG9	Enterobacteria_phage	1.0e-52	94.2
AYB84710.1\|3492794_3493106_+	hypothetical protein	A0A1I9LJL8	Stx_converting_phage	7.9e-55	99.0
AYB86003.1\|3493183_3493528_+	hypothetical protein	A0A0P0ZB93	Stx2-converting_phage	1.1e-57	97.4
AYB84711.1\|3493530_3493902_+	DNA-binding protein	B9UDM0	Salmonella_phage	2.1e-46	80.5
AYB84712.1\|3493757_3494921_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	1.0e-219	97.1
3494939:3494979	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. CP032448

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18834 : 56296

Escherichia_phage(25.0%)

integrase,transposase

attL 6522:6541|attR 46060:46079

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6522:6541	attL	NA	NA	NA	NA
AYB86162.1\|18834_19845_-\|integrase	integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
AYB86163.1\|19847_20384_-	hypothetical protein	NA	NA	NA	NA
AYB86164.1\|20376_20664_-	hypothetical protein	NA	NA	NA	NA
AYB86165.1\|20682_21003_-	hypothetical protein	NA	NA	NA	NA
AYB86166.1\|21233_21836_+	hypothetical protein	NA	NA	NA	NA
AYB86167.1\|22474_22915_-	hypothetical protein	NA	NA	NA	NA
AYB86168.1\|22886_27140_-	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.1e-18	47.6
AYB86238.1\|27094_27298_+	hypothetical protein	NA	NA	NA	NA
AYB86169.1\|27272_27998_-	hypothetical protein	NA	NA	NA	NA
AYB86170.1\|28111_28513_-	hypothetical protein	NA	NA	NA	NA
AYB86171.1\|29128_30133_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
AYB86172.1\|30232_30667_-	mercuric resistance operon regulatory protein	NA	NA	NA	NA
AYB86173.1\|30738_31089_+	mercuric transporter	NA	NA	NA	NA
AYB86174.1\|31104_31380_+	mercuric transporter periplasmic component	NA	NA	NA	NA
AYB86175.1\|31451_33137_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-38	27.9
AYB86176.1\|33151_33790_+	organomercurial lyase MerB	NA	NA	NA	NA
AYB86177.1\|33901_34267_+	mercuric resistance transcriptional repressor protein MerD	NA	NA	NA	NA
AYB86178.1\|34263_34500_+	mercury resistance protein	NA	NA	NA	NA
AYB86179.1\|34496_35486_+	DUF3330 domain-containing protein	NA	NA	NA	NA
AYB86180.1\|35695_36400_+\|transposase	IS6 family transposase IS15DI	A0A077SL39	Escherichia_phage	1.2e-138	99.6
AYB86181.1\|36439_37276_+	TEM family class A beta-lactamase	Q1MVP3	Enterobacteria_phage	9.0e-154	100.0
AYB86182.1\|37951_38314_+	transcriptional regulator	NA	NA	NA	NA
AYB86183.1\|38310_38547_+	mercury resistance protein	NA	NA	NA	NA
AYB86184.1\|38543_39251_+	EAL domain-containing protein	NA	NA	NA	NA
AYB86185.1\|39289_40594_+\|integrase	integrase	NA	NA	NA	NA
AYB86186.1\|40640_41345_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYB86187.1\|41534_42350_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
AYB86188.1\|42502_43207_+\|transposase	IS6 family transposase IS15DIV	A0A077SL39	Escherichia_phage	1.8e-139	100.0
AYB86189.1\|43723_43996_-	hypothetical protein	NA	NA	NA	NA
AYB86190.1\|44044_45226_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
AYB86191.1\|45229_46015_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
AYB86192.1\|46188_46500_-	hypothetical protein	NA	NA	NA	NA
46060:46079	attR	NA	NA	NA	NA
AYB86193.1\|46806_47622_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
AYB86194.1\|47682_48486_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
AYB86195.1\|48485_49322_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
AYB86196.1\|49627_49870_+	relaxase	NA	NA	NA	NA
AYB86197.1\|49901_50579_-	TetR family transcriptional regulator	NA	NA	NA	NA
AYB86198.1\|50657_51857_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
AYB86199.1\|52123_52429_-	LysR family transcriptional regulator	NA	NA	NA	NA
AYB86200.1\|52456_53671_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
AYB86201.1\|53887_54772_-	DUF3363 domain-containing protein	NA	NA	NA	NA
AYB86202.1\|54802_56296_-\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. CP032446

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. CP032448

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection