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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
CP032462 Lactobacillus plantarum strain ATG-K2 plasmid pK2-2, complete sequence 0 crisprs NA 0 0 0 0
CP032460 Lactobacillus plantarum strain ATG-K2 chromosome, complete genome 1 crisprs DEDDh,cas3,csa3,WYL,DinG 0 0 5 0
CP032463 Lactobacillus plantarum strain ATG-K2 plasmid pK2-3, complete sequence 0 crisprs csa3 0 0 0 0
CP032461 Lactobacillus plantarum strain ATG-K2 plasmid pK2-1, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. CP032460
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
CP032460_1 285079-285235 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 413295 : 478620 64 Lactobacillus_phage(75.76%) protease,tRNA,capsid,head,terminase,tail,portal,holin,integrase attL 419014:419032|attR 457027:457045
DBSCAN-SWA_2 504723 : 513732 9 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_3 1322273 : 1330315 10 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_4 1532034 : 1540548 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 2845088 : 2853712 11 Streptococcus_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. CP032461
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6015 : 52716 54 Staphylococcus_phage(25.0%) integrase,transposase attL 2614:2673|attR 44228:56659
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage