CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
CP028886	Borrelia turcica IST7 plasmid lp32-A, complete sequence	0 crisprs	NA	0	0	0	0
CP028889	Borrelia turcica IST7 plasmid lp35, complete sequence	1 crisprs	NA	0	1	0	0
CP028890	Borrelia turcica IST7 plasmid lp34, complete sequence	0 crisprs	NA	0	0	0	0
CP028888	Borrelia turcica IST7 plasmid cp33, complete sequence	0 crisprs	NA	0	0	0	0
CP028891	Borrelia turcica IST7 plasmid lp27, complete sequence	0 crisprs	NA	0	0	0	0
CP028887	Borrelia turcica IST7 plasmid lp32-B, complete sequence	0 crisprs	NA	0	0	0	0
CP028884	Borrelia turcica IST7 chromosome, complete genome	0 crisprs	NA	0	0	1	0
CP028885	Borrelia turcica IST7 plasmid lp129, complete sequence	0 crisprs	NA	0	0	0	0

1. CP028889

CRISPR-Cas detection and classification

Crispr_ID: CP028889_1

• CRISPR_ID: CP028889_1
• CRISPR_location: 28789-28918
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of CP028889_1

Consensus_repeat	Method
CCTGTAATATTGGCAGTGATTGCCTTAAGCACTGCTGCT	CRISPRCasFinder

spacers of CP028889_1

>1.1|28828|52|CP028889|CRISPRCasFinder
GAAAAGATATAGTCTGCTAGTTCTTTGTCCGTACTCTTACTACCAACAATAG

CRISPR arrays and Neighbor proteins around CP028889_1

CRISPR arrays

The CRISPR arrays of CP028889_1

>merge|CP028889|1|28789-28918|CRISPRCasFinder
CCTGTAATATTGGCAGTGATTGCCTTAAGCACTGCTGCTGAAAAGATATAGTCTGCTAGTTCTTTGTCCGTACTCTTACTACCAACAATAGCCTGTAATATTGGCAGTGATTGCCTTAAGCGCTGCTGCT

>CP028889|1|1|28789-28918|CRISPRCasFinder
CCTGTAATATTGGCAGTGATTGCCTTAAGCACTGCTGCT	GAAAAGATATAGTCTGCTAGTTCTTTGTCCGTACTCTTACTACCAACAATAG
CCTGTAATATTGGCAGTGATTGCCTTAAGCGCTGCTGCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
CP028889.1|AYE37038.1|30339_31383_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37041.1|33549_34725_+|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37028.1|20293_20743_+|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37037.1|29431_30049_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37033.1|26020_27304_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37031.1|22478_22712_+|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37029.1|20945_21527_-|hypothetical-protein	unknown	unknown	gnl|CDD|367048
CP028889.1|AYE37032.1|25335_26052_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37046.1|24289_24574_-|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37027.1|19680_20184_+|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37042.1|34816_35155_+|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37026.1|18941_19634_-|hypothetical-protein	unknown	unknown	gnl|CDD|225412
CP028889.1|AYE37039.1|31653_32268_-|hypothetical-protein	unknown	unknown	unknown
CP028889.1|AYE37034.1|27483_28491_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37040.1|32294_33305_-|hypothetical-protein	unknown	unknown	gnl|CDD|376417
CP028889.1|AYE37030.1|21960_22227_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
CP028889.1|AYE37038.1|30339_31383_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	2.1788e-08
CP028889.1|AYE37026.1|18941_19634_-|hypothetical-protein	gnl|CDD|225412	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism].	7.81397e-26
CP028889.1|AYE37037.1|29431_30049_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	0.000242298
CP028889.1|AYE37029.1|20945_21527_-|hypothetical-protein	gnl|CDD|367048	pfam02352, Decorin_bind, Decorin binding protein. This family consists of decorin binding proteins from Borrelia. The decorin binding protein of Borrelia burgdorferi the lyme disease spirochetes adheres to the proteoglycan decorin found on collagen fibers.	2.7178e-11
CP028889.1|AYE37034.1|27483_28491_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	3.56968e-06
CP028889.1|AYE37033.1|26020_27304_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	8.46103e-09
CP028889.1|AYE37032.1|25335_26052_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	0.000807916
CP028889.1|AYE37040.1|32294_33305_-|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	9.05279e-06
CP028889.1|AYE37041.1|33549_34725_+|hypothetical-protein	gnl|CDD|376417	pfam00921, Lipoprotein_2, Borrelia lipoprotein. This family of lipoproteins is found in Borrelia spirochetes. The function of these proteins is uncertain.	1.53041e-19

Protein sequences

>CP028889.1|AYE37034.1|27483_28491_-|hypothetical-protein
MLLLQPKAVRLAGGYEAKQADGVKSAEDKDITAVVGAAETTLEDDIFAGAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKKAEATTTKSYVDSATGAEDADIKAIVGKTTEKNLADDVFAEAALKAITTEIGTADDAIAPSAAGDGPDATAKDKIKGEAGKVAAAIKEIINLVLPNAAKSTGKSAVVTTPKKAKAGDAITLFANKGSAGDTKATETAGKAATAIVAKATGEGMLKAIADDATTKAVRLAGGYEATANDGASANDDADIEAVVGGDGVTELEDDIFAGAVALRAITKTGKFGAKAEADAKAIAGGACCN
>CP028889.1|AYE37033.1|26020_27304_-|hypothetical-protein
MVKATASDAITLFANKGTGGKAEATEAAGNAAATIVAKATGEGMLKAIADDATAEPTKAVRLAGGYAAGAENGATSAADADITAVVGSDGVTELSDDIFAGAVALRAITKTGKFGAKGAADAQAAIGGAASAAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKNAITESTKAVRLADDGADGVSNADDKDIEAIVGKTTEKNLADDVFAEAALKAITDNIAGADAAIAPSADADGPTAADDKDKIKGEAGKIAGAIKTIIDLVLPDAKLGEGTSEVVKAPKKAAASDAITLFATSATGANTQATETAGNAAATIVAKATGEGMLKAIADATTAPAKAVALAGGYAATVVNGASAADADITAVVGSDGATTLSDDVFAVAAALKAITANITGGAEEATIAPSAAGAGPANC
>CP028889.1|AYE37032.1|25335_26052_-|hypothetical-protein
MLLELGLPTAKDTIKGEAKAVAGAIKTIIDLVLPNAKLGEGKSAVVATAKQATAGDAITLFANAGSTGDHAKATAAAGKAAATIVAKATGEGMLKAIADDATTTKATTLAGGYAATANDGASKADDDDIKAIVGSSDTDKDLEDDIFSAAVALRAITKTGKFGAAAPAPEAIGAALKAITAEIGAAEATIAPSAAGDGPTDATDKDKITGEAKAVAGAVKTIIDLVLPNATLGVAGNC
>CP028889.1|AYE37046.1|24289_24574_-|hypothetical-protein
MRMIEGHSFYKVSEAQEVLKSKFSYKITKSHLRYKLEVLECYIRVGNIMLIPEDFLRYLTLSLLSFKNNEKYKFEIKREIRGKMPKFRKLIIKE
>CP028889.1|AYE37031.1|22478_22712_+|hypothetical-protein
MTSIIVYSCLTVCVAYFFSEIKKLILNLHVSIGNFFQALYLFFEMLTLILYLLINNKVYKFTAIGLIVSFCVMIFFQ
>CP028889.1|AYE37030.1|21960_22227_-|hypothetical-protein
MKLIRFPKRKSLKYDLDIQAFISQVDYNTDQLDREFREFQRQYGIDKGIDDWMDHIKKEQKNKVQELELRSKILSTLFKKKLNSYDGK
>CP028889.1|AYE37029.1|20945_21527_-|hypothetical-protein
MRYTCLHKTQSKRRQYMSKILKITSILILLASCSMLPTHLKTKVDNSSSDAKNQIDQIVKESGFTIDSLANKTGSKGVGDPRIKDVKLKVIEVGETFLSSMKDTIDELGEKGTNKQFAEIFNIILGVADSMQKIGIQQATDTVKIAADGKIADSYETITNVHDKLFEKLQNVKEKQKAAEEKKKIKLASKKAK
>CP028889.1|AYE37028.1|20293_20743_+|hypothetical-protein
MKRVASQYFIFLFFIFFMFSCSTLYLENIEGLSKDSKYIKFIFGKNKVSLRHYFTISGKLNLRYKEPLFLKVGNNIVASFLLERYRRIGDKYIQAFFSVGKDISLKTYLECIKARKFLIINSSGTIIKTVVFSKLPDSEDILHQNSKIV
>CP028889.1|AYE37027.1|19680_20184_+|hypothetical-protein
MRYSFFCLFCFFSCRTLDVNEVFDKKFDKIERANYFLYFYPDSQIYIKKDKSTNDYSVFLNVILDSSLNLNNGYLKLVQDDNYIGDINISKVVSIGNFKFLYVNVDRNNANLILRALNPYKKLSFVLNRNSYQVWTKGTLKYDARFIDVDFKSTRDTLKYALESNIL
>CP028889.1|AYE37026.1|18941_19634_-|hypothetical-protein
MESNNFSSYIKTPYIYSNYIISKYSVLLIPVPIIKIAIGEGLKVFEIAFEDKYKNFSAYIKPNKKAIYINESMPLITKRFEIAKQLGHYLMHKHKVSNPSKITDTLNIQDNNMTTEANIFATNLLIPTTTLKLKVPQYKSIQYPQRAMAKEFQVSENIIHFKLSMLKDIHKFEKSIKQKKILKVTHKNKEKNTELLLQNVDKLKESIAIDLEKREIRRKETIKKIFEELE
>CP028889.1|AYE37037.1|29431_30049_-|hypothetical-protein
MTKIAAALKAITANITGGAADAIAPSAAGAGPDATDKDTITGEAKAVAGAIKTIIDLVLPNAKLGTAKSTVVTAAKQAKAGDAITLFANKGTAGNTKATAAAGNKAVTIVAKATGEGMLKAIADDATTKAVALAGGYAATANDGATNGTDDADIEAIVGSSDTDKNLEDDIFSAAVALRAITKTGKFGAKAEADAKAIAGGACCN
>CP028889.1|AYE37038.1|30339_31383_-|hypothetical-protein
MTKIAVALKAITTEISDEATIAPSGAVDGPLAAAKDKIKEEAGKIAGAIKEIITLVLPDAKPGKAKSAVVTTAKKAAASDAITLFANKGTADATHAKATEAAGKAAATIVAKATGEGMLKAIADDATTKAVRLAGGYAAKQASGATGTDDDDITAVVGETEKELEDDIFAGAVALRAITKTGKFGAKGAAAAPATEAIGGAASAAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKKAEATTAKSYGASANNDKDIKAIVGSGENAKKLPKAKKGTAKSTVVTTAKQAAANDAITLFATGTTPNAVPTAAAGNKAAAIVAEATTTAKGNSR
>CP028889.1|AYE37039.1|31653_32268_-|hypothetical-protein
MAAAKDKIKEEAGKIAGAIKEIITLVLPDAKPGTAKSAVVATAKQATKDDAITLFATSTATHAKATEAAGNKAVTIVAKATGEGMLKAIADDTTATKAVALAGGYAANGADGASANNDADITAIVGGTSVTELSDDVFAGAVTLQAITAEIGTADDAIAPSAAGDGPDANAAKDKIKKEAKAVAEAIKAIIDLVLPNAAKGNSR
>CP028889.1|AYE37040.1|32294_33305_-|hypothetical-protein
MTAVVGDTGVTELSDDVFAAAVALRAITKTGKFGAKGAAPAPATEAIGGAASGAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKKAEATTAKSYGASANNDKDIKAIVGKTTEKNLADDVFSAAALKAITDNIAGADAEEATIAPSGAVDGPDATAAKDKIKEEAGKIAGAIKEIITLVLPDAKPGTGKSEVVKAPKKATAGDAITLFATGTGDHTKATETAGNAAATIVAKATGEGMLKAIADDATAEPTKAVRLAGGYAAKQASGATNGTDDDNDIEAIVGNEGTDKKLEDDIFAGAVALQQRLRQSLLRLVLLTIL
>CP028889.1|AYE37041.1|33549_34725_+|hypothetical-protein
MYNILETGEGLMIKLKQIKNSLLVLILLLCSCGAETAADGSDLVLPDTKAGKFIQALIDLGNNFAKAMASFGEMLGEMVGLGKINNATKKKDVADTITKTQNTLEKTNKELTSLKAPDGATTEAIKTTSEKMTKIAAALKAITTEIGAADDTIAPSAAGDGPLAAAKDKIKGEAKAVAGAIKTIIDLVLPDAKTGTAKSAVVATAKQATAGDAITLFANKGTAGNAVPTAAAGKAAATIVAKATGEGMLKAIADDATTKAVALAGGYAATANDGASKADDDDITAVVGSDGVTELSDDIFAGAVALRAITKTGKFGAKAEAAKATEAIGGAASAAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKKAEATTAKS
>CP028889.1|AYE37042.1|34816_35155_+|hypothetical-protein
MLITFDIFAGAVNKLLGALMYAIKSGVEKDIKKIQESIAKIKSDGSSKKTDIVKEDTKKAEATTTKSYVDSATGAEDADITAVVGSEGTDLVLPNAKTGKGNCKRCNNTFCQ

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
CP028889_1	1.1|28828|52|CP028889|CRISPRCasFinder	28828-28879	52	NZ_CP028889	Borrelia turcica IST7 plasmid lp35, complete sequence	28828-28879	0	1.0

1. spacer 1.1|28828|52|CP028889|CRISPRCasFinder matches to NZ_CP028889 (Borrelia turcica IST7 plasmid lp35, complete sequence) position: , mismatch: 0, identity: 1.0

gaaaagatatagtctgctagttctttgtccgtactcttactaccaacaatag	CRISPR spacer
gaaaagatatagtctgctagttctttgtccgtactcttactaccaacaatag	Protospacer
****************************************************

2. CP028884

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	464727 : 473217	8	Streptococcus_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>CP028884|464727:473217|DBSCAN-SWA
TTCAACCCTTAATCTTCCTACTTACCAAAACTGTGAACTCTCCTTTTTCTTTTTTATTCTCTTCAAAATATTTCTTCAATTCCAAAGGTTTACCCACCCTATATTCCTCATATACTTTCGTCATCTCACGTCCAACAAGAACATTGGCATCTAAATTTACTAAAGAAATTTCAGATAATAATTTCAAAATTCTATGACTGGATTCAAGGATCACAAATGCATCACCTCTACTATAAAGTTCTTCAATCCTTTTAATCCTCTTAATACCTTTATTTGCCAAAAATCCTTCAAACACTATCACCTTATCTTTAAAAGGATTTACGCTAATAATAGTATTAAAAGAACTCACACCTGGAATAGGACAAACTTTATATCCATTTTTAAGTGCTGCATCAACAAGTAATCCACCAGGATCACTCAAACAAGGTGTACCCGCATCGCTAAGAAAAGCTACACTTTTTTCACTAGATAAATACTCTAATAATAATTCTATTCTCTTATTTTCTGTTACTGCATTACAAGAAATCAATTTTTTAACAATTCCATAACGAGATAAAAGTCTTTTAGTAATTCTTGTGTCCTCAGCAAATATAACATCCACCAATTTTAAAATATCAATCGCACGATATGTAATATCTCCTAAATTACCTATGGGTGTTCCAACAACATATAACACAAAATCTCCTTTACATTAAAATTGAAAACATAGCTAACCCAATTATATTAAGCTTAATATTACATAAAAACGATATTTAATATATTAATTTTTGTAAATTATACTTTAAAGTTAAAGAAACATTATGCATAAAACCATTATCTTAAAATACTTAATATTTATCCAATATTCAAATATTATATACTCACATGAGAAAATATTTATTTTATGTTATATTTATACTTATGTTATTGGGTAATATTGGCAACTGAAAGTTAAAAGGCGGTAAATTTTATGTTTAAGCTCATTAGAAAAATATTTATAGTCTATTTTTTATGCATTACCCTTGCTGGACTTGTTATGGTTTTTTTTGACAGTAAATTTTCAGAAAAAGAAAGTGTTCAAAATGGCAAAAGCCAAATTATTAAACATAAAATCGACCCGAACCTACTTCTATTTACCTCTTCAATTGGAGGTTTTTTGGGAGTTTATGCCGGCATATGGATTTTTGATTATGAAAAAAATAACTTTTATTTAAGCTGGGGCAGCTTAATAATATTAATATATAATATAGGTCTAATCCTTTTTGTATATTCTAAATCAACCAATAAATAAATTTAAATTAAGAATTATTCATAATAATGCCACTCTTTATCATATATTTATATACTTCTTCTGGGTTTTCTAAGCTCTCAATCAAATTTTCAGCTTTATCATTTATTCGCTCTACTAGCTTTTTAAAAGTTACCTTTATTCCTCTACTTTCCAAAAAGTCCTTTGCTGGTTGTGAAATAACGCCGGCTTGAACATTTTGAAGTCCAATATTGTATATTATAATAGCAGCAGCCTTGCCCACAACCTTATCATAAATCTCTAAACCTTCTTTATTTTGAATATACTTATTAATAAAATTATCAACCTCTAAAAGGGGTTTTAAACCTCTTTCCATATTAGAATAAAGTATCCTATGATCCTTAAACAACCTTAATGTAGGATTCAATCCTGATATCATTTCCACCCCTCAAACACTTGTTTTCAGTACTTACTAAAAATAATCACTATTAATGATATACATAAATTAAAAATACTTCAACATAAAAAAAATGATATATTATTAAATTACATGATGCTAATTCCTAAAGAAAGTATCCAATCAAAAATTGAAATAAAGAAATCCATTTTCTTATCTTACATTTTTCATGTAGAGAAAAAAGAAGAAATAAATAAAATACTAAGAGAATATAAATTAAAATTTAAAAATGCATCACATGTTGTACATGGGTTTAGAATAGGCAATTCAATTTCATTTATAAATGGAATGAGTGATGACAAAGAACCACACTTAACAGCAGGAAAACCCACACTAGATGCCATATTAAATAACAATCTAACAGACACTCTAATAATTACAATACGCTACTTTGGAGGAACTCTACTTGGAAAAGGAGGATTAATAAAAGCATATTCTAAGTCAGCAGTAGAAGTAATCAATAAATCAAACTTAATAGAAAAAGAAGAAATGGAAACATTAGGTTTAAATTTAGACTATAATCAATATAATTTACTTATAAGAATAAAAAACAAGGTAGGAATTAAAATTACAGATGCAAGTTTTTTAGAAAAAATAAATACCACAATAACATTTAACATAAAAAACAAGGTAGATATTTTGCTATTTTTACAAGAAAATTCCTTAATTTAATTACCTTTATGTAAAGTTCATCTCATTACTCTAATACAATCTTATATATTATTTTTCATTTTTACTATTTATGTTCTACAATAGAATATTATTAATATGTACAACAAGAGAAAATTTTTATGAAAATAATATCTATTATTAATCAAAAAGGCGGAGTTGGCAAAACAACTAGTGCCATAAACATTGCTTACTCAATGACACTTCTTAATAAAAAAACTCTTCTAATAGATATTGATCCGCAAGGAAACACTAGTAGTGGAACAAATGTTTTAAAAAAAGAAAGTAAAAAATCAAATTCAAGTTATGAACTTATTTATAAAAAACAAAAAATTGAACCTACTCAAAGTTTTAATTTAAATATAATTCCCTCAAGTCTTAAATTAGCATTACTTGAAAAGGAATTAACAAATGAAATTGCAAGGGAAAGCTTTTTAAAAAATTCTCTCCTGAAATATAGAAAAGATAACTATGATTTCATACTTATTGATTGTCCTCCTACTCTCTCAATACTCACAATAAATGCTCTTGTTGCAAGTAAATATGTTTTAATACCAATAGAAACAGAATTTTTTGCTTTTGAAGGAATTAATCAACTATTAGATACAATAAATGCTGTAAAGCAAATCAATAAAGAGTTAAAGATTACTGGTGTCTTTATAAATAAATATGATATTAGAAATAAAAGTAAAGAAAAATACATTGATTATCTTAAAAGGATATTTAAAAAAAGTTTTTTAAACACCAAAATAAGAAAAAATATAAGTATCTCTAAATCACAAGAAGAAAAAATACCAGTACATATGTACAATAAAGAAAGCAATGCAGCTCGAGACTTTTTAGATCTTACAAAAGAAATAATTTGCAAAATTGAAGGATAAAAATGTCAGATAATCTAGACACATTAATGGCTCTAATGGGTCAAAAGCTAGAAAAAAATGAAAGTGTTTTAGCAAAGCAAGAATTAATTATTATTGAAAGTAAAAATTTTGAGTATGATAAATTAGACAAAGAAACAGCCGAATTTTTAAAGATGAAGCAATATGAGATTTTTAACATATTTAACAACACATACTCAGAAATCGGAAGAATATTAAAAGAAGCACAAGAAAAACTACGTGGAAGCAATCAATATGACGGGCTTTTTTATAAATGGTTTACTAGTATGGGATTTAAAAAGGACAAGGTTTACTCATTAATATCAAGATACGAATTGCTTGTCGAATATTCCGATAAGCAATTCGTAATAAAAAACTTACCCCTATCTCTCTCATATGAAATTGCAAAAAAATCCTGTCCTATTAATTTAAAAACAGAAGTCCTCAATGGAAAAATAAAATCTTTAAAAGAATTTAAATCACTCTATAAAAAAGATATAAATTACAAAAAAAATAGTAAAATCGAAATTAACAAACCCCTAGTCAAATCTGAAGAAATTGCAAAAATAATAGAATTGCTACTGCAAGAATTAGAAGATATTAAAAATATTAAATTAGATAAGATTAAACATAAAGAAAAATTATGTTTAATTCTAAAAGAAATACAACAAAGTATAAATTACATGAAAAAATTTATTATCTAGTTTTTTTAAAAAAATATTTCCCCGTAGAACTATAAGAAATAACACCCTTTTGTTTTTTTTGCTTTATTATTTTTTAAGTTGTATCTACACTAAAATTTTCTTAAAATCACCACAAAACTTTATAAAATTATTATATACAAAACTCAGTTAAGCAAAAAAAAGAATGTTCACCAGAACATTCTTTAAATACAGTTAATATTAATTTATCATTTAATAAATTTTGAAACAGATACTAACTTATCCTCATCAAGAGACAACACTTGAATTCCTCTAGCATCCTTACCTTGTTCAGATACTTTATCTGCTGATGTTCTTAAAATCTTTGCACTCTTACTTATAAGGAATATTTCATCTTCCTGCGTAACTGTAATAGCATCAACAACTTCACCTGCTTTCTCATCTGATTTCTTATAGCTAGTATAACCGGTAGCTCCTCTCTTAAGCTCAGTCAATTTAGATACATCTAATCTCTTTCCATATCCATTTTCAGAAACAATTAAAAGATAAGAGCCTTTTCTATGAACTAAAGCCTTAATACAAGTATCGCCCTCTTTAACCTTCATACCAGATACACCCTGGGTTCCTCTATGCGTAAGCCTAATATCACTTGAATTAAATATAAAAGAATTCCCTTTCTTAGAAATACAAATAATTTTTTCATCCTTAGAAACAACTTCAGCACTTGTAACAAAATCTTTATCAACAAGCCTAATAACAATAACTCCTCTTGTCTTAACTGTTTTAAGCCCTTCCATTTCAATACGAGCTACTTTTCCGCTAGCGGTTGTTATTAATAAATAATTATTCTCTGTTAACTCATTGCAATTTTTAATAGTTAATATTTCTTCTGTTTCTCCCAAATTAACAAGCTCACGTATATCTTGTCCCTTTGAAGACCTAGAAGTATCCTTAATTTCATACGCATTAATCACATAAAGTTTTCCTTCGTTTGAAATCATAAATAAAAAGTCATGAGTACTTACACACAAAGAAATATTAACTTGGTCTTCATCTTGCAAATCAAAAGAGCTAAGACCTTTACCACCTATACCTTGAAGTTTATATTCATCCTGTAAGATTCTCTTAATAAAACCTTTCTTTGTAAGAATAACAATAACATTTTCTTTCTGCATTAAATCTGCCATACTTGTTTTTAAAACCTCCTCATCATATATTATTTTTGTTCGGCGCTCATCGCCAAATTTTAAACTTAAATTAAGAACTTCTTCTCTTATAATATCAACAATTCTTGTCGGATTTAAAAGAATATCTTCATAATCATTTATTAAAGCTAAGATAAGTTTAAACTCTTCCTCAATTTTTTCTATTTCAAGAGATGTTAGCTTTTGTAACTTCATGTCAAGAATAGCATTAGATTGAATCTCCGATAAATTAAACTCATTAATAATACGCTCCCTAGCCTCCTTTACAACTCTAGAAAACTTTATTATTTCTATTATCTTATCAATATTTTTCAAGGCTACATTTAATCCTTCAAGGATATGAGCCTTTTCTTTTGCCTTCCTTAAATCAAACTCTACCCGTCTTCTAACAATTTCCTTTCTATGCTTAATAAATTCAGACAAAAGTTCTTCTAAATTTAATTGTTTTGGAATTCCATTAACAAGAGCCAAATTATTTATACTAAAATTTTTCTTAAGTTCAGTATATTCATAAAGCAAATTCATAACAACGCAAGGGTCAAATCCTTTCTTAATTTCAAGAACAATTCTAATCCCATCACGATCTGATTCATCTCGTATATCAGAAATACCCTCCAACTTTTCTTCTTTTACCAAAAATGCAATTTTCATAAGCAAAGAAGATTTATTAACAGCATAAGGTATCTCTGTCACTATAATAAAAGAAAGGTCCTCTGTTTTTTTCTCAATATGATATTTAGCTCGAATAACAACGCTTCCCTTACCTGTTGTATAAGCTTTAACTAAGCTATCACTATAAATAATTTCAGCAGAAGTTGGAAAATCTGGGCCTTTAACTATTTCAATTAAATCATAAATGGATATATTATCGTGATCTAGCATATAAACTAAAGCAGCACAAATTTCACCTAAATTATGTGGAGCCATATTTGTTGCCATTCCAACAGCAATACCACTAGACCCGTTTACCAATAAAAATGGAAAAGCAGCCGGCAAAACTTCAGGCTCATCTAAAGAATCATCATAGTTAGGCTTAAAATCAACAGTTTGCTTATCTATATCCCTAACAAGCTCTTCCGCTATTTTTGCCATCCGTGCTTCAGTATATCGCATAGCAGCAGGAGGATCACCATCAACAGAACCAAAATTTCCCTGTCCACTTATTACAGGATATCTTAGAGAAAAAACCTGCGCAAGTCTTACAAGTGCCTCATAAATCGATTGATCCCCATGAGGATGATATTTTCCAAGAACATCACCAACTATCCTTCCTGCCTTTTTAAATGGCTTATCTGACCTAAGTCCCATTTCATGCATCGAATAAAGGATTCTTCTGTGCACAGGTTTAAGACCATCCCTCACATCAGGAAGAGCTCTTGAAACAATTACAGACATTGCATAATTTAAATAAGAAGTCCTAACTTCATCCTCTATTTTAATATTTAATATTTGTTCAACATTCTCTTCAGTTGGCATCCCTACTCCAATTACACATCCAGATTTACTACATCAAGTGCATTTTGCTCAATAAATTCTCTTCTAGGTTCAACATCATCTCCCATAAGAGTAACAAAAATTCTATCAGCCTGCATAGCGTCATCGATCCCTATTAATTTCATCTTTCTAGTTGCAGGATTCATAGTAGTTTCCCAAAGTTGAGTAGGATTCATTTCTCCAAGTCCCTTATATCTTTGAAGATTAATCTTATCTCTCTTATCACTCTCAATAGACCCTAAAAAAGATTCTTTTTCCAAGTCATCATAAAAATAATGTACCCTGTTTTCAGACTTAATCTTATAAAGAGGTGGCATAGCTATATAAACATGTTTATTTTCAACTAAAGTTCTCATGTAACGAAAGAAAAAAGTAAGCAGTAGAGTCCTAATATGAGACCCATCAACATCAGCATCAGCCATAATAATAACCTTATGATAACGAAGTCTTTCAATGCAAAAAGTCTTCCCAACGCCAGCTCCAAGAGACGCAATTATCGGAATAAGTTTATCATTTGTAATAACCTTATCTTCTCTTGTTTTCTCAACATTAAGCATTTTCCCCCATAATGGCAAAATAGCTTGAAAAAACCTGTCTCTTCCCATTTTTGCACTTCCCCCAGCAGAATCTCCTTCTACAATATAAATTTCTCTCTCAACAGGATTTTTAGAAGAACAATCTGCTAATTTCCCAGGCAATGCCAAACTTTCAAATGTACTTTTCTTTCTCTCAGATTCTCTTGCTTTTCTTGCTGCTTCACGAGCACGAGCGGCTCTTATTGCTTTATCAAAAATAACTTCTATTTCTAAAGGATTATCATTAATAATACTCAAAAGCCCATCATGTACAACAGTTTCAACAATCTTTTTCACATAAGAATTGCCCAACTTTCCTTTAGTCTGTCCTTCAAATTGAGGTTCAGGTACCTTAATAGAAATTACTGCCGTTAACCCCTCTTTAAAATCATCTAATGTAAGGATTGGAACATCTTTTTTGCTTATTTTTGTCATTTTAAAAGCCTCATTCATTGCCTTAAAAAGACCACTCCTAAACCCAGCAACATGAGTTCCCCCCTCTCTAGTATTAATATTGTTGACAAAAGATAAAATATTCTCAGAATACCCCTCTGTCCACTTAAGTCCAACATCAACAATAACCTCATCAAAAGATCCTTCAATAAAATAAGGTTCACTTTGAATATTCCTGCTATTGTTTGTTAAATAATCTACAAAAGCTTTTATTCCACCTTCAAAATAAAATTCTTTAAATTTTTCTTCTCCTAATCTTCTATCTTCAATTGAAATTCTTATTTTATCATTTAAAAATGCAAGTTCCTTAAGCCTCTTTGAAAGAGTTTCAAAACTATAGTTTAAAGTCTCAAAAATTTCATAATCCGCTAAAAAAGTAACCTTAGTGCCCCTAGAACAACTTTCTCCAACAACCTCAACCTCAGATGTCGGAATACCTCTTGAAAAAGTTTGTCTAAAAACTTTCCCGTCTCTGCGTACAAAAACCTCTAAAAAAGACGACAAAGCATTAACAACCGAAATTCCAACACCATGAAGTCCCCCAGAAACCTTATAAGTACCTTTATTAAATTTTCCCCCAGAGTGTAACTTAGTTAAAACAAGTTCAAGCGCACTAATTCCCTCTTCCTCATGAATATCTGTAGGAATTCCTCGTCCATTATCGCTTACTGTTATGGAATTATCTGAATTGATAACAATCTCTATTTTATCACAAAATCCAGCCAAAGCCTCGTCAATACTATTATCAACTACCTCATAGACCAAGTGATGTAGTCCATTAATTGAAACAGATCCAATATACATACCAGGTCTTTTTCTAACAGCTTCAAGTCCCTTTAAAACTTGAATATTACTAGCAACATAACTCAT

Protein sequences of DBSCAN-SWA_1

>CP028884|464727:473217|464727_465402_-|AYE36298.1|DBSCAN-SWA
MLYVVGTPIGNLGDITYRAIDILKLVDVIFAEDTRITKRLLSRYGIVKKLISCNAVTENKRIELLLEYLSSEKSVAFLSDAGTPCLSDPGGLLVDAALKNGYKVCPIPGVSSFNTIISVNPFKDKVIVFEGFLANKGIKRIKRIEELYSRGDAFVILESSHRILKLLSEISLVNLDANVLVGREMTKVYEEYRVGKPLELKKYFEENKKEKGEFTVLVSRKIKG
>CP028884|464727:473217|471312_473217_-|AYE36305.1|DBSCAN-SWA
MSYVASNIQVLKGLEAVRKRPGMYIGSVSINGLHHLVYEVVDNSIDEALAGFCDKIEIVINSDNSITVSDNGRGIPTDIHEEEGISALELVLTKLHSGGKFNKGTYKVSGGLHGVGISVVNALSSFLEVFVRRDGKVFRQTFSRGIPTSEVEVVGESCSRGTKVTFLADYEIFETLNYSFETLSKRLKELAFLNDKIRISIEDRRLGEEKFKEFYFEGGIKAFVDYLTNNSRNIQSEPYFIEGSFDEVIVDVGLKWTEGYSENILSFVNNINTREGGTHVAGFRSGLFKAMNEAFKMTKISKKDVPILTLDDFKEGLTAVISIKVPEPQFEGQTKGKLGNSYVKKIVETVVHDGLLSIINDNPLEIEVIFDKAIRAARAREAARKARESERKKSTFESLALPGKLADCSSKNPVEREIYIVEGDSAGGSAKMGRDRFFQAILPLWGKMLNVEKTREDKVITNDKLIPIIASLGAGVGKTFCIERLRYHKVIIMADADVDGSHIRTLLLTFFFRYMRTLVENKHVYIAMPPLYKIKSENRVHYFYDDLEKESFLGSIESDKRDKINLQRYKGLGEMNPTQLWETTMNPATRKMKLIGIDDAMQADRIFVTLMGDDVEPRREFIEQNALDVVNLDV
>CP028884|464727:473217|466504_467083_+|AYE36301.1|DBSCAN-SWA
MMLIPKESIQSKIEIKKSIFLSYIFHVEKKEEINKILREYKLKFKNASHVVHGFRIGNSISFINGMSDDKEPHLTAGKPTLDAILNNNLTDTLIITIRYFGGTLLGKGGLIKAYSKSAVEVINKSNLIEKEEMETLGLNLDYNQYNLLIRIKNKVGIKITDASFLEKINTTITFNIKNKVDILLFLQENSLI
>CP028884|464727:473217|467202_467961_+|AYE36302.1|DBSCAN-SWA
MKIISIINQKGGVGKTTSAINIAYSMTLLNKKTLLIDIDPQGNTSSGTNVLKKESKKSNSSYELIYKKQKIEPTQSFNLNIIPSSLKLALLEKELTNEIARESFLKNSLLKYRKDNYDFILIDCPPTLSILTINALVASKYVLIPIETEFFAFEGINQLLDTINAVKQINKELKITGVFINKYDIRNKSKEKYIDYLKRIFKKSFLNTKIRKNISISKSQEEKIPVHMYNKESNAARDFLDLTKEIICKIEG
>CP028884|464727:473217|466003_466393_-|AYE36300.1|DBSCAN-SWA
MISGLNPTLRLFKDHRILYSNMERGLKPLLEVDNFINKYIQNKEGLEIYDKVVGKAAAIIIYNIGLQNVQAGVISQPAKDFLESRGIKVTFKKLVERINDKAENLIESLENPEEVYKYMIKSGIIMNNS
>CP028884|464727:473217|465675_465996_+|AYE36299.1|DBSCAN-SWA
MFKLIRKIFIVYFLCITLAGLVMVFFDSKFSEKESVQNGKSQIIKHKIDPNLLLFTSSIGGFLGVYAGIWIFDYEKNNFYLSWGSLIILIYNIGLILFVYSKSTNK
>CP028884|464727:473217|468868_471301_-|AYE36304.1|DBSCAN-SWA
MPTEENVEQILNIKIEDEVRTSYLNYAMSVIVSRALPDVRDGLKPVHRRILYSMHEMGLRSDKPFKKAGRIVGDVLGKYHPHGDQSIYEALVRLAQVFSLRYPVISGQGNFGSVDGDPPAAMRYTEARMAKIAEELVRDIDKQTVDFKPNYDDSLDEPEVLPAAFPFLLVNGSSGIAVGMATNMAPHNLGEICAALVYMLDHDNISIYDLIEIVKGPDFPTSAEIIYSDSLVKAYTTGKGSVVIRAKYHIEKKTEDLSFIIVTEIPYAVNKSSLLMKIAFLVKEEKLEGISDIRDESDRDGIRIVLEIKKGFDPCVVMNLLYEYTELKKNFSINNLALVNGIPKQLNLEELLSEFIKHRKEIVRRRVEFDLRKAKEKAHILEGLNVALKNIDKIIEIIKFSRVVKEARERIINEFNLSEIQSNAILDMKLQKLTSLEIEKIEEEFKLILALINDYEDILLNPTRIVDIIREEVLNLSLKFGDERRTKIIYDEEVLKTSMADLMQKENVIVILTKKGFIKRILQDEYKLQGIGGKGLSSFDLQDEDQVNISLCVSTHDFLFMISNEGKLYVINAYEIKDTSRSSKGQDIRELVNLGETEEILTIKNCNELTENNYLLITTASGKVARIEMEGLKTVKTRGVIVIRLVDKDFVTSAEVVSKDEKIICISKKGNSFIFNSSDIRLTHRGTQGVSGMKVKEGDTCIKALVHRKGSYLLIVSENGYGKRLDVSKLTELKRGATGYTSYKKSDEKAGEVVDAITVTQEDEIFLISKSAKILRTSADKVSEQGKDARGIQVLSLDEDKLVSVSKFIK
>CP028884|464727:473217|467963_468662_+|AYE36303.1|DBSCAN-SWA
MSDNLDTLMALMGQKLEKNESVLAKQELIIIESKNFEYDKLDKETAEFLKMKQYEIFNIFNNTYSEIGRILKEAQEKLRGSNQYDGLFYKWFTSMGFKKDKVYSLISRYELLVEYSDKQFVIKNLPLSLSYEIAKKSCPINLKTEVLNGKIKSLKEFKSLYKKDINYKKNSKIEINKPLVKSEEIAKIIELLLQELEDIKNIKLDKIKHKEKLCLILKEIQQSINYMKKFII

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
AYE36298.1|464727_465402_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.9e-32	40.1
AYE36299.1|465675_465996_+	hypothetical protein	NA	NA	NA	NA
AYE36300.1|466003_466393_-	DUF1893 domain-containing protein	NA	NA	NA	NA
AYE36301.1|466504_467083_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.5e-17	32.7
AYE36302.1|467202_467961_+	ParA family protein	H7BUL8	unidentified_phage	3.4e-19	30.2
AYE36303.1|467963_468662_+	hypothetical protein	A0A1P8CWU6	Bacillus_phage	2.1e-26	40.8
AYE36304.1|468868_471301_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.3e-101	32.3
AYE36305.1|471312_473217_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	4.9e-139	44.7